Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23960.t1 | XP_013468467.1 | 97.4 | 1215 | 32 | 0 | 1 | 1215 | 1 | 1215 | 0.00E+00 | 2288.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23960.t1 | Q7F2E4 | 61.3 | 1221 | 429 | 11 | 2 | 1214 | 3 | 1187 | 0.0e+00 | 1365.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23960.t1 | A0A072VKG4 | 97.4 | 1215 | 32 | 0 | 1 | 1215 | 1 | 1215 | 0.0e+00 | 2288.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene23960.t1 | TR | SNF2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23960.t1 | MTR_1g069755 | 97.366 | 1215 | 32 | 0 | 1 | 1215 | 1 | 1215 | 0.0 | 2451 |
MS.gene23960.t1 | MTR_8g094070 | 32.965 | 634 | 332 | 12 | 327 | 907 | 320 | 913 | 1.01e-99 | 342 |
MS.gene23960.t1 | MTR_8g094070 | 32.965 | 634 | 332 | 12 | 327 | 907 | 320 | 913 | 3.81e-99 | 341 |
MS.gene23960.t1 | MTR_4g078495 | 29.348 | 644 | 320 | 15 | 381 | 935 | 121 | 718 | 1.57e-85 | 298 |
MS.gene23960.t1 | MTR_4g078460 | 29.503 | 644 | 319 | 15 | 381 | 935 | 407 | 1004 | 6.22e-83 | 295 |
MS.gene23960.t1 | MTR_3g106210 | 33.764 | 542 | 295 | 14 | 363 | 882 | 263 | 762 | 4.89e-78 | 283 |
MS.gene23960.t1 | MTR_3g106210 | 33.764 | 542 | 295 | 14 | 363 | 882 | 263 | 762 | 5.43e-78 | 283 |
MS.gene23960.t1 | MTR_3g106210 | 33.948 | 542 | 294 | 14 | 363 | 882 | 263 | 762 | 1.06e-77 | 281 |
MS.gene23960.t1 | MTR_3g106210 | 33.948 | 542 | 294 | 14 | 363 | 882 | 263 | 762 | 1.08e-77 | 281 |
MS.gene23960.t1 | MTR_4g118845 | 35.081 | 496 | 264 | 13 | 384 | 871 | 181 | 626 | 1.09e-76 | 276 |
MS.gene23960.t1 | MTR_4g118845 | 35.318 | 487 | 257 | 13 | 393 | 871 | 3 | 439 | 1.12e-76 | 273 |
MS.gene23960.t1 | MTR_4g118720 | 32.874 | 508 | 283 | 13 | 391 | 881 | 1005 | 1471 | 6.64e-75 | 275 |
MS.gene23960.t1 | MTR_5g020000 | 31.299 | 508 | 300 | 10 | 394 | 887 | 187 | 659 | 1.16e-74 | 264 |
MS.gene23960.t1 | MTR_2g020000 | 35.010 | 497 | 263 | 13 | 384 | 871 | 184 | 629 | 1.87e-74 | 269 |
MS.gene23960.t1 | MTR_1g013190 | 33.948 | 542 | 300 | 14 | 366 | 891 | 270 | 769 | 4.28e-74 | 270 |
MS.gene23960.t1 | MTR_5g005840 | 33.212 | 548 | 284 | 18 | 353 | 884 | 341 | 822 | 4.48e-73 | 265 |
MS.gene23960.t1 | MTR_1g105050 | 33.399 | 506 | 280 | 13 | 391 | 884 | 376 | 836 | 7.32e-72 | 261 |
MS.gene23960.t1 | MTR_5g090090 | 32.941 | 510 | 283 | 13 | 391 | 884 | 617 | 1083 | 3.54e-69 | 255 |
MS.gene23960.t1 | MTR_3g053910 | 32.171 | 516 | 279 | 13 | 391 | 884 | 571 | 1037 | 8.32e-69 | 255 |
MS.gene23960.t1 | MTR_5g090090 | 32.941 | 510 | 283 | 13 | 391 | 884 | 617 | 1083 | 9.44e-69 | 254 |
MS.gene23960.t1 | MTR_3g053910 | 32.171 | 516 | 279 | 13 | 391 | 884 | 600 | 1066 | 1.20e-68 | 254 |
MS.gene23960.t1 | MTR_5g004720 | 29.469 | 621 | 333 | 17 | 394 | 957 | 187 | 759 | 1.29e-68 | 250 |
MS.gene23960.t1 | MTR_1g035330 | 31.746 | 567 | 255 | 17 | 385 | 869 | 188 | 704 | 4.32e-68 | 245 |
MS.gene23960.t1 | MTR_4g096930 | 30.242 | 496 | 285 | 11 | 390 | 868 | 733 | 1184 | 5.59e-68 | 253 |
MS.gene23960.t1 | MTR_4g035100 | 31.522 | 552 | 275 | 12 | 394 | 883 | 1453 | 1963 | 1.17e-66 | 248 |
MS.gene23960.t1 | MTR_4g035100 | 31.522 | 552 | 275 | 12 | 394 | 883 | 1453 | 1963 | 1.25e-66 | 248 |
MS.gene23960.t1 | MTR_8g030550 | 31.098 | 492 | 268 | 11 | 391 | 855 | 987 | 1434 | 9.46e-60 | 226 |
MS.gene23960.t1 | MTR_8g030550 | 31.098 | 492 | 268 | 11 | 391 | 855 | 987 | 1434 | 9.46e-60 | 226 |
MS.gene23960.t1 | MTR_8g030550 | 31.098 | 492 | 268 | 11 | 391 | 855 | 987 | 1434 | 1.26e-59 | 226 |
MS.gene23960.t1 | MTR_7g078090 | 30.488 | 492 | 272 | 11 | 391 | 855 | 994 | 1442 | 3.76e-57 | 218 |
MS.gene23960.t1 | MTR_7g045505 | 30.021 | 483 | 276 | 11 | 417 | 871 | 16 | 464 | 8.21e-54 | 203 |
MS.gene23960.t1 | MTR_7g045505 | 30.021 | 483 | 276 | 12 | 417 | 871 | 16 | 464 | 2.69e-53 | 203 |
MS.gene23960.t1 | MTR_7g039320 | 28.831 | 496 | 264 | 9 | 394 | 871 | 42 | 466 | 5.50e-52 | 198 |
MS.gene23960.t1 | MTR_7g039320 | 28.831 | 496 | 264 | 9 | 394 | 871 | 42 | 466 | 6.37e-52 | 198 |
MS.gene23960.t1 | MTR_1g053955 | 31.161 | 353 | 194 | 9 | 372 | 718 | 502 | 811 | 1.14e-42 | 171 |
MS.gene23960.t1 | MTR_1g053955 | 37.975 | 237 | 138 | 4 | 735 | 965 | 1062 | 1295 | 1.86e-38 | 157 |
MS.gene23960.t1 | MTR_7g090960 | 28.173 | 394 | 231 | 7 | 373 | 752 | 560 | 915 | 3.28e-37 | 153 |
MS.gene23960.t1 | MTR_7g090960 | 44.667 | 150 | 83 | 0 | 734 | 883 | 1191 | 1340 | 1.40e-34 | 145 |
MS.gene23960.t1 | MTR_7g090960 | 28.173 | 394 | 231 | 7 | 373 | 752 | 479 | 834 | 4.26e-37 | 153 |
MS.gene23960.t1 | MTR_7g090960 | 44.667 | 150 | 83 | 0 | 734 | 883 | 1110 | 1259 | 1.53e-34 | 144 |
MS.gene23960.t1 | MTR_4g078460 | 24.946 | 465 | 225 | 11 | 381 | 760 | 407 | 832 | 1.50e-35 | 146 |
MS.gene23960.t1 | MTR_8g094100 | 30.159 | 315 | 175 | 5 | 522 | 834 | 13 | 284 | 1.99e-35 | 137 |
MS.gene23960.t1 | MTR_7g050445 | 27.226 | 584 | 329 | 22 | 369 | 883 | 696 | 1252 | 3.62e-33 | 140 |
MS.gene23960.t1 | MTR_7g450820 | 26.552 | 580 | 320 | 20 | 377 | 883 | 640 | 1186 | 3.77e-32 | 136 |
MS.gene23960.t1 | MTR_7g029525 | 25.312 | 561 | 330 | 16 | 383 | 883 | 743 | 1274 | 5.38e-32 | 136 |
MS.gene23960.t1 | MTR_1g080420 | 35.211 | 213 | 118 | 3 | 732 | 930 | 1111 | 1317 | 3.85e-31 | 133 |
MS.gene23960.t1 | MTR_1g080420 | 28.647 | 377 | 196 | 11 | 378 | 718 | 700 | 1039 | 1.95e-29 | 128 |
MS.gene23960.t1 | MTR_1g080420 | 35.211 | 213 | 118 | 3 | 732 | 930 | 980 | 1186 | 3.85e-31 | 133 |
MS.gene23960.t1 | MTR_1g080420 | 28.647 | 377 | 196 | 11 | 378 | 718 | 569 | 908 | 2.10e-29 | 127 |
MS.gene23960.t1 | MTR_7g450790 | 24.682 | 628 | 343 | 21 | 338 | 883 | 810 | 1389 | 4.14e-30 | 130 |
MS.gene23960.t1 | MTR_7g450860 | 25.521 | 576 | 310 | 20 | 383 | 883 | 693 | 1224 | 7.62e-28 | 122 |
MS.gene23960.t1 | MTR_4g124090 | 24.644 | 491 | 316 | 13 | 382 | 869 | 165 | 604 | 3.65e-27 | 119 |
MS.gene23960.t1 | MTR_4g088650 | 25.417 | 539 | 324 | 18 | 389 | 883 | 664 | 1168 | 2.74e-26 | 117 |
MS.gene23960.t1 | MTR_8g037345 | 26.453 | 499 | 306 | 18 | 410 | 879 | 382 | 848 | 1.20e-24 | 112 |
MS.gene23960.t1 | MTR_2g437480 | 24.950 | 497 | 315 | 17 | 410 | 879 | 532 | 997 | 1.48e-24 | 112 |
MS.gene23960.t1 | MTR_1g044120 | 34.171 | 199 | 127 | 3 | 706 | 901 | 955 | 1152 | 5.27e-22 | 103 |
MS.gene23960.t1 | MTR_2g084630 | 30.841 | 214 | 144 | 3 | 691 | 901 | 809 | 1021 | 5.82e-21 | 100 |
MS.gene23960.t1 | MTR_2g012830 | 34.395 | 157 | 98 | 2 | 751 | 903 | 1148 | 1303 | 5.35e-20 | 97.4 |
MS.gene23960.t1 | MTR_1g115215 | 38.333 | 120 | 74 | 0 | 753 | 872 | 887 | 1006 | 6.67e-20 | 96.7 |
MS.gene23960.t1 | MTR_1g115215 | 24.367 | 316 | 180 | 10 | 442 | 718 | 404 | 699 | 5.66e-11 | 67.8 |
MS.gene23960.t1 | MTR_7g089190 | 34.266 | 143 | 90 | 2 | 734 | 872 | 647 | 789 | 1.13e-17 | 89.4 |
MS.gene23960.t1 | MTR_2g084630 | 29.596 | 223 | 144 | 6 | 691 | 901 | 803 | 1024 | 7.76e-17 | 86.7 |
MS.gene23960.t1 | MTR_7g450780 | 31.056 | 161 | 106 | 2 | 730 | 885 | 1140 | 1300 | 8.67e-17 | 87.0 |
MS.gene23960.t1 | MTR_4g049500 | 30.833 | 120 | 83 | 0 | 753 | 872 | 784 | 903 | 9.34e-14 | 76.6 |
MS.gene23960.t1 | MTR_3g071860 | 31.013 | 158 | 100 | 5 | 733 | 883 | 1067 | 1222 | 4.68e-13 | 74.7 |
MS.gene23960.t1 | MTR_5g083300 | 29.927 | 137 | 90 | 2 | 753 | 883 | 1160 | 1296 | 4.45e-12 | 71.2 |
MS.gene23960.t1 | MTR_5g083300 | 29.927 | 137 | 90 | 2 | 753 | 883 | 1123 | 1259 | 4.49e-12 | 71.2 |
MS.gene23960.t1 | MTR_8g094080 | 37.209 | 86 | 46 | 2 | 350 | 429 | 14 | 97 | 1.82e-11 | 62.8 |
MS.gene23960.t1 | MTR_7g026650 | 29.286 | 140 | 93 | 3 | 750 | 883 | 969 | 1108 | 2.93e-11 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23960.t1 | AT2G18760 | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1511 |
MS.gene23960.t1 | AT2G18760 | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1511 |
MS.gene23960.t1 | AT2G18760 | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1511 |
MS.gene23960.t1 | AT2G18760 | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1511 |
MS.gene23960.t1 | AT2G18760 | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1511 |
MS.gene23960.t1 | AT2G18760 | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1511 |
MS.gene23960.t1 | AT2G18760 | 70.242 | 867 | 230 | 7 | 351 | 1214 | 404 | 1245 | 0.0 | 1233 |
MS.gene23960.t1 | AT2G18760 | 47.090 | 378 | 191 | 6 | 1 | 377 | 1 | 370 | 2.65e-79 | 286 |
MS.gene23960.t1 | AT5G63950 | 34.286 | 595 | 297 | 10 | 358 | 903 | 351 | 900 | 4.19e-99 | 341 |
MS.gene23960.t1 | AT5G63950 | 33.962 | 583 | 298 | 9 | 358 | 903 | 351 | 883 | 1.17e-92 | 322 |
MS.gene23960.t1 | AT5G19310 | 35.156 | 512 | 262 | 16 | 391 | 884 | 122 | 581 | 8.31e-77 | 271 |
MS.gene23960.t1 | AT2G25170 | 34.314 | 510 | 296 | 11 | 384 | 882 | 266 | 747 | 4.25e-76 | 277 |
MS.gene23960.t1 | AT2G25170 | 34.314 | 510 | 296 | 11 | 384 | 882 | 266 | 747 | 4.25e-76 | 277 |
MS.gene23960.t1 | AT2G25170 | 34.314 | 510 | 296 | 11 | 384 | 882 | 283 | 764 | 4.35e-76 | 277 |
MS.gene23960.t1 | AT2G25170 | 34.314 | 510 | 296 | 11 | 384 | 882 | 292 | 773 | 5.98e-76 | 276 |
MS.gene23960.t1 | AT5G19310 | 35.029 | 511 | 264 | 15 | 391 | 884 | 386 | 845 | 2.16e-75 | 272 |
MS.gene23960.t1 | AT3G06010 | 32.381 | 630 | 330 | 20 | 281 | 884 | 304 | 863 | 1.19e-73 | 267 |
MS.gene23960.t1 | AT2G28290 | 32.283 | 508 | 286 | 11 | 391 | 881 | 754 | 1220 | 1.59e-73 | 270 |
MS.gene23960.t1 | AT3G06400 | 34.000 | 500 | 270 | 13 | 381 | 871 | 179 | 627 | 1.66e-73 | 266 |
MS.gene23960.t1 | AT2G28290 | 32.283 | 508 | 286 | 11 | 391 | 881 | 754 | 1220 | 1.74e-73 | 270 |
MS.gene23960.t1 | AT2G28290 | 32.283 | 508 | 286 | 11 | 391 | 881 | 754 | 1220 | 1.74e-73 | 270 |
MS.gene23960.t1 | AT2G28290 | 32.283 | 508 | 286 | 11 | 391 | 881 | 755 | 1221 | 1.81e-73 | 270 |
MS.gene23960.t1 | AT2G28290 | 32.283 | 508 | 286 | 11 | 391 | 881 | 755 | 1221 | 1.82e-73 | 270 |
MS.gene23960.t1 | AT2G28290 | 32.283 | 508 | 286 | 11 | 391 | 881 | 754 | 1220 | 1.84e-73 | 270 |
MS.gene23960.t1 | AT3G06400 | 34.000 | 500 | 270 | 13 | 381 | 871 | 179 | 627 | 2.09e-73 | 266 |
MS.gene23960.t1 | AT3G06400 | 34.000 | 500 | 270 | 13 | 381 | 871 | 179 | 627 | 2.17e-73 | 266 |
MS.gene23960.t1 | AT2G13370 | 33.006 | 509 | 284 | 12 | 390 | 884 | 624 | 1089 | 9.69e-72 | 264 |
MS.gene23960.t1 | AT2G13370 | 33.006 | 509 | 284 | 12 | 390 | 884 | 624 | 1089 | 9.69e-72 | 264 |
MS.gene23960.t1 | AT2G13370 | 33.006 | 509 | 284 | 12 | 390 | 884 | 624 | 1089 | 9.69e-72 | 264 |
MS.gene23960.t1 | AT5G18620 | 33.141 | 519 | 282 | 14 | 379 | 884 | 179 | 645 | 1.78e-71 | 260 |
MS.gene23960.t1 | AT5G18620 | 33.141 | 519 | 282 | 14 | 379 | 884 | 179 | 645 | 2.16e-71 | 260 |
MS.gene23960.t1 | AT3G54280 | 32.014 | 556 | 268 | 13 | 394 | 883 | 1454 | 1965 | 3.34e-71 | 263 |
MS.gene23960.t1 | AT3G54280 | 31.892 | 555 | 270 | 12 | 394 | 883 | 1485 | 1996 | 3.37e-71 | 263 |
MS.gene23960.t1 | AT3G19210 | 30.442 | 565 | 306 | 15 | 394 | 906 | 183 | 712 | 1.38e-68 | 247 |
MS.gene23960.t1 | AT3G19210 | 30.442 | 565 | 306 | 15 | 394 | 906 | 183 | 712 | 2.74e-68 | 248 |
MS.gene23960.t1 | AT5G66750 | 29.206 | 630 | 380 | 16 | 316 | 923 | 130 | 715 | 8.92e-68 | 244 |
MS.gene23960.t1 | AT4G31900 | 32.157 | 510 | 282 | 13 | 384 | 881 | 218 | 675 | 1.16e-67 | 250 |
MS.gene23960.t1 | AT4G31900 | 32.157 | 510 | 282 | 13 | 384 | 881 | 177 | 634 | 1.22e-67 | 249 |
MS.gene23960.t1 | AT4G31900 | 32.157 | 510 | 282 | 13 | 384 | 881 | 218 | 675 | 1.26e-67 | 249 |
MS.gene23960.t1 | AT5G44800 | 31.154 | 520 | 296 | 12 | 390 | 891 | 688 | 1163 | 2.68e-67 | 250 |
MS.gene23960.t1 | AT3G19210 | 30.142 | 564 | 307 | 15 | 394 | 906 | 183 | 710 | 1.93e-66 | 243 |
MS.gene23960.t1 | AT2G44980 | 29.481 | 597 | 347 | 18 | 394 | 955 | 54 | 611 | 1.68e-62 | 231 |
MS.gene23960.t1 | AT2G02090 | 29.915 | 585 | 290 | 16 | 377 | 885 | 198 | 738 | 1.86e-61 | 226 |
MS.gene23960.t1 | AT2G46020 | 30.894 | 492 | 269 | 10 | 391 | 855 | 981 | 1428 | 5.51e-60 | 227 |
MS.gene23960.t1 | AT2G46020 | 30.894 | 492 | 269 | 10 | 391 | 855 | 981 | 1428 | 5.51e-60 | 227 |
MS.gene23960.t1 | AT2G46020 | 30.894 | 492 | 269 | 10 | 391 | 855 | 981 | 1428 | 5.51e-60 | 227 |
MS.gene23960.t1 | AT2G44980 | 29.097 | 598 | 349 | 19 | 394 | 955 | 54 | 612 | 1.95e-59 | 221 |
MS.gene23960.t1 | AT2G44980 | 28.866 | 582 | 352 | 16 | 394 | 955 | 54 | 593 | 2.81e-59 | 221 |
MS.gene23960.t1 | AT2G46020 | 30.691 | 492 | 271 | 10 | 391 | 855 | 981 | 1429 | 4.16e-59 | 224 |
MS.gene23960.t1 | AT2G46020 | 30.691 | 492 | 271 | 10 | 391 | 855 | 981 | 1429 | 4.16e-59 | 224 |
MS.gene23960.t1 | AT2G46020 | 30.691 | 492 | 271 | 10 | 391 | 855 | 981 | 1429 | 4.16e-59 | 224 |
MS.gene23960.t1 | AT1G08600 | 28.326 | 639 | 320 | 15 | 378 | 914 | 706 | 1308 | 5.50e-58 | 220 |
MS.gene23960.t1 | AT1G08600 | 28.326 | 639 | 320 | 15 | 378 | 914 | 706 | 1308 | 5.50e-58 | 220 |
MS.gene23960.t1 | AT1G08600 | 28.326 | 639 | 320 | 15 | 378 | 914 | 706 | 1308 | 5.50e-58 | 220 |
MS.gene23960.t1 | AT1G08600 | 30.275 | 436 | 232 | 6 | 551 | 914 | 852 | 1287 | 9.22e-47 | 184 |
MS.gene23960.t1 | AT3G12810 | 32.479 | 351 | 190 | 7 | 373 | 718 | 518 | 826 | 3.46e-46 | 182 |
MS.gene23960.t1 | AT3G12810 | 46.429 | 168 | 89 | 1 | 735 | 901 | 1075 | 1242 | 4.41e-41 | 166 |
MS.gene23960.t1 | AT3G12810 | 32.479 | 351 | 190 | 7 | 373 | 718 | 514 | 822 | 3.52e-46 | 182 |
MS.gene23960.t1 | AT3G12810 | 46.429 | 168 | 89 | 1 | 735 | 901 | 1071 | 1238 | 4.52e-41 | 166 |
MS.gene23960.t1 | AT1G03750 | 39.565 | 230 | 127 | 5 | 727 | 951 | 520 | 742 | 1.98e-45 | 178 |
MS.gene23960.t1 | AT1G03750 | 28.135 | 327 | 185 | 4 | 381 | 695 | 129 | 417 | 9.09e-38 | 154 |
MS.gene23960.t1 | AT3G57300 | 27.692 | 390 | 220 | 9 | 362 | 729 | 551 | 900 | 1.23e-36 | 151 |
MS.gene23960.t1 | AT3G57300 | 41.520 | 171 | 98 | 1 | 734 | 902 | 1205 | 1375 | 4.08e-35 | 146 |
MS.gene23960.t1 | AT3G57300 | 27.692 | 390 | 220 | 9 | 362 | 729 | 551 | 900 | 1.23e-36 | 151 |
MS.gene23960.t1 | AT3G57300 | 41.520 | 171 | 98 | 1 | 734 | 902 | 1205 | 1375 | 4.08e-35 | 146 |
MS.gene23960.t1 | AT3G57300 | 27.692 | 390 | 220 | 9 | 362 | 729 | 551 | 900 | 3.32e-36 | 150 |
MS.gene23960.t1 | AT3G57300 | 27.919 | 394 | 247 | 9 | 362 | 729 | 551 | 933 | 1.88e-35 | 147 |
MS.gene23960.t1 | AT3G57300 | 41.520 | 171 | 98 | 1 | 734 | 902 | 1238 | 1408 | 5.13e-35 | 146 |
MS.gene23960.t1 | AT1G05490 | 26.040 | 553 | 344 | 17 | 375 | 875 | 806 | 1345 | 7.69e-30 | 129 |
MS.gene23960.t1 | AT1G48310 | 24.082 | 490 | 320 | 11 | 382 | 869 | 163 | 602 | 1.81e-29 | 126 |
MS.gene23960.t1 | AT1G48310 | 24.082 | 490 | 320 | 11 | 382 | 869 | 168 | 607 | 2.08e-29 | 126 |
MS.gene23960.t1 | AT1G48310 | 24.145 | 497 | 311 | 13 | 382 | 869 | 163 | 602 | 7.27e-29 | 124 |
MS.gene23960.t1 | AT3G24340 | 23.679 | 549 | 339 | 17 | 387 | 889 | 573 | 1087 | 1.25e-24 | 112 |
MS.gene23960.t1 | AT2G21450 | 24.575 | 529 | 295 | 17 | 410 | 879 | 293 | 776 | 4.61e-23 | 106 |
MS.gene23960.t1 | AT2G21450 | 24.575 | 529 | 295 | 17 | 410 | 879 | 286 | 769 | 6.54e-23 | 106 |
MS.gene23960.t1 | AT1G02670 | 22.689 | 595 | 339 | 20 | 384 | 901 | 127 | 677 | 1.71e-22 | 104 |
MS.gene23960.t1 | AT2G21450 | 24.575 | 529 | 295 | 17 | 410 | 879 | 195 | 678 | 1.85e-22 | 104 |
MS.gene23960.t1 | AT1G02670 | 22.689 | 595 | 339 | 20 | 384 | 901 | 116 | 666 | 2.45e-22 | 103 |
MS.gene23960.t1 | AT5G22750 | 31.308 | 214 | 143 | 3 | 691 | 901 | 816 | 1028 | 2.83e-22 | 104 |
MS.gene23960.t1 | AT5G22750 | 22.764 | 369 | 180 | 8 | 411 | 717 | 414 | 739 | 1.77e-15 | 82.4 |
MS.gene23960.t1 | AT1G11100 | 33.333 | 186 | 112 | 4 | 720 | 902 | 1092 | 1268 | 2.04e-21 | 102 |
MS.gene23960.t1 | AT1G11100 | 33.333 | 186 | 112 | 4 | 720 | 902 | 1093 | 1269 | 2.09e-21 | 102 |
MS.gene23960.t1 | AT1G11100 | 33.333 | 186 | 112 | 4 | 720 | 902 | 950 | 1126 | 2.19e-21 | 101 |
MS.gene23960.t1 | AT1G11100 | 33.333 | 186 | 112 | 4 | 720 | 902 | 1049 | 1225 | 2.35e-21 | 101 |
MS.gene23960.t1 | AT1G11100 | 33.333 | 186 | 112 | 4 | 720 | 902 | 906 | 1082 | 2.39e-21 | 101 |
MS.gene23960.t1 | AT5G05130 | 39.855 | 138 | 79 | 2 | 755 | 889 | 729 | 865 | 6.33e-21 | 100 |
MS.gene23960.t1 | AT1G61140 | 30.387 | 181 | 118 | 2 | 703 | 879 | 1075 | 1251 | 1.05e-20 | 99.8 |
MS.gene23960.t1 | AT1G61140 | 30.387 | 181 | 118 | 2 | 703 | 879 | 917 | 1093 | 1.09e-20 | 99.4 |
MS.gene23960.t1 | AT2G16390 | 22.574 | 505 | 329 | 11 | 410 | 882 | 374 | 848 | 1.33e-20 | 99.0 |
MS.gene23960.t1 | AT2G16390 | 22.574 | 505 | 329 | 11 | 410 | 882 | 371 | 845 | 2.34e-20 | 98.2 |
MS.gene23960.t1 | AT5G43530 | 34.437 | 151 | 98 | 1 | 751 | 901 | 1127 | 1276 | 1.22e-19 | 96.3 |
MS.gene23960.t1 | AT3G20010 | 31.395 | 172 | 103 | 2 | 716 | 872 | 551 | 722 | 1.86e-18 | 91.7 |
MS.gene23960.t1 | AT3G20010 | 31.395 | 172 | 103 | 2 | 716 | 872 | 576 | 747 | 2.01e-18 | 91.7 |
MS.gene23960.t1 | AT3G20010 | 31.395 | 172 | 103 | 2 | 716 | 872 | 842 | 1013 | 2.54e-18 | 91.7 |
MS.gene23960.t1 | AT3G20010 | 31.395 | 172 | 103 | 2 | 716 | 872 | 842 | 1013 | 2.54e-18 | 91.7 |
MS.gene23960.t1 | AT3G20010 | 31.395 | 172 | 103 | 2 | 716 | 872 | 842 | 1013 | 2.54e-18 | 91.7 |
MS.gene23960.t1 | AT1G50410 | 36.667 | 120 | 76 | 0 | 753 | 872 | 828 | 947 | 1.37e-17 | 89.4 |
MS.gene23960.t1 | AT1G50410 | 36.667 | 120 | 76 | 0 | 753 | 872 | 828 | 947 | 1.37e-17 | 89.4 |
MS.gene23960.t1 | AT1G50410 | 36.667 | 120 | 76 | 0 | 753 | 872 | 828 | 947 | 1.37e-17 | 89.4 |
MS.gene23960.t1 | AT1G05120 | 31.667 | 120 | 82 | 0 | 753 | 872 | 682 | 801 | 2.21e-15 | 82.0 |
MS.gene23960.t1 | AT1G05120 | 31.667 | 120 | 82 | 0 | 753 | 872 | 725 | 844 | 2.44e-15 | 82.0 |
MS.gene23960.t1 | AT1G02670 | 29.114 | 158 | 110 | 1 | 746 | 901 | 505 | 662 | 2.45e-13 | 75.1 |
MS.gene23960.t1 | AT1G02670 | 29.114 | 158 | 110 | 1 | 746 | 901 | 532 | 689 | 2.60e-13 | 75.1 |
MS.gene23960.t1 | AT3G42670 | 30.387 | 181 | 114 | 5 | 709 | 883 | 1036 | 1210 | 3.86e-12 | 71.6 |
MS.gene23960.t1 | AT3G42670 | 30.387 | 181 | 114 | 5 | 709 | 883 | 1036 | 1210 | 3.86e-12 | 71.6 |
MS.gene23960.t1 | AT3G42670 | 30.387 | 181 | 114 | 5 | 709 | 883 | 1036 | 1210 | 3.86e-12 | 71.6 |
MS.gene23960.t1 | AT3G42670 | 30.387 | 181 | 114 | 5 | 709 | 883 | 1038 | 1212 | 4.06e-12 | 71.6 |
MS.gene23960.t1 | AT5G20420 | 40.506 | 79 | 47 | 0 | 805 | 883 | 1138 | 1216 | 1.83e-11 | 69.3 |
MS.gene23960.t1 | AT1G48310 | 21.374 | 393 | 255 | 12 | 382 | 771 | 163 | 504 | 7.27e-11 | 66.6 |
Find 268 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATACAAGTATTGTCATTTC+TGG | 0.147108 | 1.3:+49320816 | MS.gene23960:CDS |
TTCTTGATTACCTCGAATTT+TGG | 0.174611 | 1.3:-49323854 | None:intergenic |
GAATATCCGCCAACTCTTAT+AGG | 0.177890 | 1.3:-49321396 | None:intergenic |
ATCTCATGACACGATTAATT+AGG | 0.184289 | 1.3:-49321092 | None:intergenic |
TCTGAAGATGTAAATATTAT+TGG | 0.184454 | 1.3:+49323044 | MS.gene23960:CDS |
AAAAGTTCAACATGGAATTT+AGG | 0.235396 | 1.3:-49320934 | None:intergenic |
GCCACCTTTCTGTTGGAAAA+AGG | 0.235886 | 1.3:-49324001 | None:intergenic |
CGTTCAGGATTTCCATAATC+TGG | 0.242674 | 1.3:-49322099 | None:intergenic |
ACAGCAGAAAAGGTTCTTTA+AGG | 0.244059 | 1.3:+49322938 | MS.gene23960:CDS |
AGAGCTTCAAATATGTTATC+AGG | 0.245190 | 1.3:-49320697 | None:intergenic |
CGAATTCTGCTTTCTACTTT+AGG | 0.253420 | 1.3:+49318495 | MS.gene23960:CDS |
CTTTGCTATTGTTTAGCAAC+TGG | 0.262300 | 1.3:-49323735 | None:intergenic |
AAAACAGAGAATGGCTTTAA+TGG | 0.269139 | 1.3:+49322284 | MS.gene23960:CDS |
GGAGGCAGGAATTCACTTTA+TGG | 0.269702 | 1.3:+49322009 | MS.gene23960:CDS |
TTATCTTCAGTAACTGTAAC+TGG | 0.272561 | 1.3:-49318685 | None:intergenic |
CCTGTTCAAGAATATGTTAA+AGG | 0.283069 | 1.3:+49324086 | MS.gene23960:CDS |
TTGATGAAGGGCATAAAATT+AGG | 0.290044 | 1.3:+49321202 | MS.gene23960:CDS |
CTCATTGTCGTCTAGAGGTT+TGG | 0.294525 | 1.3:-49319848 | None:intergenic |
TCGGCTTTAGCTTTCGATAT+CGG | 0.294766 | 1.3:-49318757 | None:intergenic |
GCCTTCAGCAATCCAGATTA+TGG | 0.299383 | 1.3:+49322087 | MS.gene23960:CDS |
CTGAAGATGTAAATATTATT+GGG | 0.301082 | 1.3:+49323045 | MS.gene23960:CDS |
CCGAGACGCTTTCATGATTT+CGG | 0.301794 | 1.3:-49323633 | None:intergenic |
TATGCTGCTGGGGCTTCTTC+TGG | 0.303252 | 1.3:+49323802 | MS.gene23960:CDS |
TGTTCCCTTTCAAGTAGGTC+TGG | 0.306886 | 1.3:-49322063 | None:intergenic |
CAAAGAGCTGGTGGAATTAT+TGG | 0.309829 | 1.3:+49320769 | MS.gene23960:CDS |
CACTGAGGTGGAGGAAATAT+TGG | 0.315867 | 1.3:+49321984 | MS.gene23960:CDS |
CCACTTGTGGACATATTTAC+CGG | 0.320575 | 1.3:+49322238 | MS.gene23960:CDS |
TTATGAGCAGCTAAGGATAT+TGG | 0.320593 | 1.3:+49321140 | MS.gene23960:CDS |
TCTCATGACACGATTAATTA+GGG | 0.326833 | 1.3:-49321091 | None:intergenic |
ATGTGAGGAGAATGAGAATT+TGG | 0.329806 | 1.3:+49318870 | MS.gene23960:CDS |
GCCTAAGCAGCTTGGAGGTT+GGG | 0.332101 | 1.3:-49319756 | None:intergenic |
GTTACAGTTACTGAAGATAA+AGG | 0.335904 | 1.3:+49318688 | MS.gene23960:CDS |
CAATAATTCCACCAGCTCTT+TGG | 0.338841 | 1.3:-49320768 | None:intergenic |
CATTGTCGCAGGAGTGTAAC+AGG | 0.339026 | 1.3:-49320886 | None:intergenic |
TCAAGCTTCGGTACCTCTTC+AGG | 0.343037 | 1.3:-49319778 | None:intergenic |
AGAGCAATAGAATTTGAAAT+TGG | 0.343177 | 1.3:+49318796 | MS.gene23960:CDS |
CCTTTAACATATTCTTGAAC+AGG | 0.343556 | 1.3:-49324086 | None:intergenic |
TTCTTCTAAACTTTCACAAC+TGG | 0.352979 | 1.3:-49320608 | None:intergenic |
GATATCGGATCAACGATTTC+AGG | 0.355492 | 1.3:-49318742 | None:intergenic |
GTTCTCGATGCAGCCTCTGC+TGG | 0.357955 | 1.3:+49319174 | MS.gene23960:CDS |
TTGAATGTGGATGGAGAAAC+TGG | 0.358958 | 1.3:+49322987 | MS.gene23960:CDS |
ATATAGTCAAACTGCTGAAC+TGG | 0.360504 | 1.3:+49323097 | MS.gene23960:CDS |
TCTTATAGGAACTGCAAATT+CGG | 0.361649 | 1.3:-49321382 | None:intergenic |
TTACGACTAGTTGATGCTTC+AGG | 0.365157 | 1.3:-49319646 | None:intergenic |
TGATCATCTTTGACCCTGAT+TGG | 0.365360 | 1.3:+49322397 | MS.gene23960:CDS |
TTTGTAGCTGTTTGCAAGCT+AGG | 0.367235 | 1.3:-49321245 | None:intergenic |
AGTTATCTTTAGTTTAGTTA+AGG | 0.367658 | 1.3:+49319044 | MS.gene23960:CDS |
TCATCTGTTCGGCGGAAGTT+TGG | 0.369276 | 1.3:+49323697 | MS.gene23960:CDS |
GCTAGGGTAACTTCGGCGTT+TGG | 0.369888 | 1.3:-49321228 | None:intergenic |
CTGTAGATGTTAGAACTTCC+AGG | 0.373491 | 1.3:+49323923 | MS.gene23960:CDS |
AGCAGGTTGACAAAAGTAAT+GGG | 0.373508 | 1.3:+49323189 | MS.gene23960:CDS |
TTTATTGCAGAAAATGCTAA+TGG | 0.375440 | 1.3:+49320571 | MS.gene23960:intron |
TTCTTCCGAGGATAGACAAC+TGG | 0.378832 | 1.3:+49319942 | MS.gene23960:CDS |
ATGTGGCGTTCGATGTCTTC+GGG | 0.381605 | 1.3:-49318534 | None:intergenic |
ACCAGTTGCTTAACATTGAA+TGG | 0.383660 | 1.3:+49321166 | MS.gene23960:CDS |
GAAATAGCGACTCTGCATAA+AGG | 0.387468 | 1.3:+49324108 | MS.gene23960:CDS |
ACACGATTCTGCTCAGGATC+TGG | 0.388344 | 1.3:+49320957 | MS.gene23960:CDS |
GAAGAAAACGAAGGCTCAAT+TGG | 0.398710 | 1.3:+49318963 | MS.gene23960:CDS |
TCATTGTCGTCTAGAGGTTT+GGG | 0.400134 | 1.3:-49319847 | None:intergenic |
TCTTCGTATGTAACATTAGA+AGG | 0.401619 | 1.3:+49320661 | MS.gene23960:CDS |
TATGAGCAGCTAAGGATATT+GGG | 0.401792 | 1.3:+49321141 | MS.gene23960:CDS |
TCACTCAGTTTGTTCTGAAT+AGG | 0.402502 | 1.3:-49321297 | None:intergenic |
ATCTGAATACAGATTCAAAA+AGG | 0.411403 | 1.3:+49319875 | MS.gene23960:CDS |
AGAGGATCTTCAAGAGGAAA+AGG | 0.413502 | 1.3:+49323161 | MS.gene23960:CDS |
ACATACTATACTTGATAGTC+TGG | 0.414240 | 1.3:-49324159 | None:intergenic |
TGGGGCACATCAAGAAAATC+AGG | 0.418341 | 1.3:+49323064 | MS.gene23960:CDS |
TGCAGCTCTTTGTGCAACCT+TGG | 0.418890 | 1.3:-49323584 | None:intergenic |
TAGCTCAAGTGCTTAACGTT+TGG | 0.420004 | 1.3:+49322142 | MS.gene23960:CDS |
AACCCCTTCAACTTATGAAA+AGG | 0.420557 | 1.3:-49319604 | None:intergenic |
CACTCCTGCGACAATGGAAA+AGG | 0.423981 | 1.3:+49320893 | MS.gene23960:CDS |
CATGATCAAATCATGGTTCA+TGG | 0.424447 | 1.3:-49323518 | None:intergenic |
TCAGTCGAAGGATTCCAATC+AGG | 0.425501 | 1.3:-49322411 | None:intergenic |
ATACAAGTATTGTCATTTCT+GGG | 0.429969 | 1.3:+49320817 | MS.gene23960:CDS |
TGGACATATTTACCGGAGAA+TGG | 0.430465 | 1.3:+49322245 | MS.gene23960:CDS |
TCTCAACTTCTGATGAAGTT+CGG | 0.430506 | 1.3:-49318776 | None:intergenic |
CAATTCAATGGAAGAAGAAC+AGG | 0.432561 | 1.3:+49318470 | None:intergenic |
GCGTTCGATGTCTTCGGGAT+TGG | 0.433413 | 1.3:-49318529 | None:intergenic |
GATTGATGAGGGTGGTGGTT+CGG | 0.433672 | 1.3:+49318900 | MS.gene23960:CDS |
CCCATTCAATGTTAAGCAAC+TGG | 0.434195 | 1.3:-49321167 | None:intergenic |
AGAGAGCGTGCATGGCGAAT+TGG | 0.435088 | 1.3:+49322801 | MS.gene23960:CDS |
CCAGTTGCTTAACATTGAAT+GGG | 0.435701 | 1.3:+49321167 | MS.gene23960:CDS |
AAATTCAATGGATATGCTGC+TGG | 0.439036 | 1.3:+49323790 | MS.gene23960:CDS |
GGCCTAAGCAGCTTGGAGGT+TGG | 0.439109 | 1.3:-49319757 | None:intergenic |
AGGGCTCCTGAAAATTCATC+TGG | 0.440060 | 1.3:+49323943 | MS.gene23960:CDS |
GTTCCCTTTCAAGTAGGTCT+GGG | 0.440324 | 1.3:-49322062 | None:intergenic |
ACCCCTTCAACTTATGAAAA+GGG | 0.441098 | 1.3:-49319603 | None:intergenic |
GGGTTGGGGACAAATCTTAC+TGG | 0.443116 | 1.3:+49322363 | MS.gene23960:CDS |
TGAAGAACCCACAGCAGAAA+AGG | 0.444273 | 1.3:+49322928 | MS.gene23960:CDS |
CATCTGATGAATCGCCAAGC+AGG | 0.448274 | 1.3:+49323758 | MS.gene23960:CDS |
CTGTTACACTCCTGCGACAA+TGG | 0.449553 | 1.3:+49320887 | MS.gene23960:CDS |
AAATAGCGACTCTGCATAAA+GGG | 0.451334 | 1.3:+49324109 | MS.gene23960:CDS |
ATCAAAAGGTTGGTGTTCAA+TGG | 0.454705 | 1.3:+49320728 | MS.gene23960:CDS |
AAGATACTTGCTCTGGTGTA+AGG | 0.455144 | 1.3:-49321939 | None:intergenic |
GAGAAATATTTGACCACTTG+TGG | 0.456900 | 1.3:+49322225 | MS.gene23960:CDS |
TTCTTGCTGCCGATAGGTTG+AGG | 0.458693 | 1.3:+49318935 | MS.gene23960:CDS |
GTCTCATCTTCTCCTCATCA+TGG | 0.459580 | 1.3:-49323546 | None:intergenic |
AGAGGTTTGGGTAATTGCAT+TGG | 0.463309 | 1.3:-49319835 | None:intergenic |
CGTGTCATGAGATCAGAATC+TGG | 0.464384 | 1.3:+49321102 | MS.gene23960:CDS |
AGGAAATATTGGATGGAGGC+AGG | 0.465489 | 1.3:+49321995 | MS.gene23960:CDS |
GCCGGGCTTGAGCATCAGTT+TGG | 0.465538 | 1.3:+49323889 | MS.gene23960:CDS |
TCATCTATAAGCTTCTTCTT+CGG | 0.468209 | 1.3:-49319078 | None:intergenic |
CTTTAAGGCCCGAGATATGA+AGG | 0.469277 | 1.3:+49322953 | MS.gene23960:CDS |
ATTGGTGATGAGATGGGTCT+TGG | 0.469913 | 1.3:+49320787 | MS.gene23960:CDS |
ATGCTCAAGCCCGGCACTGA+TGG | 0.470923 | 1.3:-49323881 | None:intergenic |
TTATCTTCTCCGACGAATGA+AGG | 0.471261 | 1.3:+49321864 | MS.gene23960:CDS |
CGCTTGGTCCATTTCCTACC+AGG | 0.471849 | 1.3:-49319916 | None:intergenic |
AATGTGGCGTTCGATGTCTT+CGG | 0.472099 | 1.3:-49318535 | None:intergenic |
GTCCATTTCCTACCAGGCCC+AGG | 0.474923 | 1.3:-49319910 | None:intergenic |
TAGTTCAGCATTTCAAGGAC+AGG | 0.475898 | 1.3:+49324043 | MS.gene23960:CDS |
TTACAGTTACTGAAGATAAA+GGG | 0.476260 | 1.3:+49318689 | MS.gene23960:CDS |
AACGGGATGTAACTATATAT+AGG | 0.476551 | 1.3:+49322829 | MS.gene23960:CDS |
AGCTCTGTTTGACTATCAAA+AGG | 0.478905 | 1.3:+49320714 | MS.gene23960:CDS |
TTCAGGCCTAAGCAGCTTGG+AGG | 0.479949 | 1.3:-49319761 | None:intergenic |
TACAACTGCCACCTTTCTGT+TGG | 0.480183 | 1.3:-49324008 | None:intergenic |
AGACCTACTTGAAAGGGAAC+AGG | 0.482185 | 1.3:+49322065 | MS.gene23960:CDS |
GCTTAACGTTTGGAAGGAGC+AGG | 0.482366 | 1.3:+49322152 | MS.gene23960:CDS |
GAGCCTGCGAAAAGGAATAG+TGG | 0.482879 | 1.3:-49319806 | None:intergenic |
CTCTTCAGGCCTAAGCAGCT+TGG | 0.482921 | 1.3:-49319764 | None:intergenic |
GACCTGGGCCTGGTAGGAAA+TGG | 0.485311 | 1.3:+49319908 | MS.gene23960:CDS |
TGCTGGGGCTTCTTCTGGTA+AGG | 0.487387 | 1.3:+49323807 | MS.gene23960:CDS |
GATGATGCAGTTGGTGATGA+TGG | 0.492105 | 1.3:+49323128 | MS.gene23960:CDS |
TTTGGCAAGCACTGAGGTGG+AGG | 0.493553 | 1.3:+49321975 | MS.gene23960:CDS |
AGGGATGAATTGGTTAGAAA+AGG | 0.496652 | 1.3:+49319571 | MS.gene23960:CDS |
TCCAACCTGAAGTAATGATT+CGG | 0.496931 | 1.3:+49323968 | MS.gene23960:CDS |
GGTTATGCAGTTCTTGATGA+AGG | 0.496995 | 1.3:+49321189 | MS.gene23960:CDS |
TGCTGCCTGAGAAAATGATC+TGG | 0.497300 | 1.3:-49319725 | None:intergenic |
TTCATTCGTCGGAGAAGATA+AGG | 0.501540 | 1.3:-49321862 | None:intergenic |
ATGGCGAATTGGTCAGAAAC+GGG | 0.502201 | 1.3:+49322812 | MS.gene23960:CDS |
AGAATGAGAATTTGGACGAA+GGG | 0.503031 | 1.3:+49318878 | MS.gene23960:CDS |
AGGGTCAAATGGTTCCCATT+GGG | 0.503238 | 1.3:+49324128 | MS.gene23960:CDS |
CAGCATAGTTCAGCATTTCA+AGG | 0.504315 | 1.3:+49324038 | MS.gene23960:CDS |
TTCACCCAGTTGTCTATCCT+CGG | 0.505055 | 1.3:-49319947 | None:intergenic |
CACTCCTGTAAAACAGAGAA+TGG | 0.505391 | 1.3:+49322275 | MS.gene23960:CDS |
GTCTGGCTTCAGAACCCAAT+GGG | 0.505996 | 1.3:-49324142 | None:intergenic |
TATCCTTAGCTGCTCATAAG+TGG | 0.506805 | 1.3:-49321136 | None:intergenic |
TTGTAGCTGTTTGCAAGCTA+GGG | 0.507608 | 1.3:-49321244 | None:intergenic |
AAGCAGGTTGACAAAAGTAA+TGG | 0.507796 | 1.3:+49323188 | MS.gene23960:CDS |
ACAGGAAGGTCAGGAGCTGC+TGG | 0.513164 | 1.3:+49323667 | MS.gene23960:CDS |
GCTTTCAGAGTCTGTTCCAT+CGG | 0.513216 | 1.3:-49321004 | None:intergenic |
CTGTTTGACTATCAAAAGGT+TGG | 0.513640 | 1.3:+49320718 | MS.gene23960:CDS |
AACTTCCGCCGAACAGATGA+TGG | 0.514665 | 1.3:-49323694 | None:intergenic |
TTTGCTATTGTTTAGCAACT+GGG | 0.515205 | 1.3:-49323734 | None:intergenic |
GAATCCTTCGACTGATATGC+AGG | 0.515387 | 1.3:+49322419 | MS.gene23960:CDS |
CTTTAACATATTCTTGAACA+GGG | 0.520567 | 1.3:-49324085 | None:intergenic |
GTCTCGGTTCCTACATGGAC+AGG | 0.521528 | 1.3:+49323649 | MS.gene23960:CDS |
AAGGGTCAAATGGTTCCCAT+TGG | 0.522050 | 1.3:+49324127 | MS.gene23960:CDS |
AACAGGACAGACAATAATGC+TGG | 0.522323 | 1.3:-49320869 | None:intergenic |
AGGGGATCTAACAAATTCAA+TGG | 0.524381 | 1.3:+49323778 | MS.gene23960:CDS |
CTTCAAACTCCTCAACCTAT+CGG | 0.525226 | 1.3:-49318944 | None:intergenic |
GCAGTTCCTATAAGAGTTGG+CGG | 0.525434 | 1.3:+49321390 | MS.gene23960:CDS |
CTGGTGCACCATCATCTGTT+CGG | 0.525881 | 1.3:+49323686 | MS.gene23960:CDS |
AGAACAAACTGAGTGAGTTA+TGG | 0.526350 | 1.3:+49321304 | MS.gene23960:CDS |
TCCGAATCATTACTTCAGGT+TGG | 0.526761 | 1.3:-49323969 | None:intergenic |
TTTGCAGTTCCTATAAGAGT+TGG | 0.530100 | 1.3:+49321387 | MS.gene23960:CDS |
CAGTTTCTTCGACAATTGAA+AGG | 0.530212 | 1.3:+49318821 | MS.gene23960:CDS |
TACAAGTATCCACAGCATAC+AGG | 0.532080 | 1.3:+49321433 | MS.gene23960:CDS |
CTATAAGAAGATACTTGCTC+TGG | 0.532480 | 1.3:-49321946 | None:intergenic |
TGGAATTATTGGTGATGAGA+TGG | 0.533546 | 1.3:+49320780 | MS.gene23960:CDS |
CATATTTACCGGAGAATGGA+TGG | 0.535121 | 1.3:+49322249 | MS.gene23960:CDS |
ACTCTGCATAAAGGGTCAAA+TGG | 0.535759 | 1.3:+49324117 | MS.gene23960:CDS |
AAAGCGTCTCGGTTCCTACA+TGG | 0.536121 | 1.3:+49323644 | MS.gene23960:CDS |
ACCGTCTTAAACCGCTTCGC+AGG | 0.536930 | 1.3:-49319120 | None:intergenic |
TCACCCAGACCTACTTGAAA+GGG | 0.538242 | 1.3:+49322059 | MS.gene23960:CDS |
GATAGACAACTGGGTGAAAG+TGG | 0.540821 | 1.3:+49319952 | MS.gene23960:CDS |
GAGCTTCAAATATGTTATCA+GGG | 0.541463 | 1.3:-49320696 | None:intergenic |
GGAATTATTGGTGATGAGAT+GGG | 0.542035 | 1.3:+49320781 | MS.gene23960:CDS |
CCTACATGGACAGGAAGGTC+AGG | 0.542696 | 1.3:+49323658 | MS.gene23960:CDS |
AATCACACGTGGAACTATAG+AGG | 0.543110 | 1.3:+49322854 | MS.gene23960:CDS |
CAGTCGAAGGATTCCAATCA+GGG | 0.543818 | 1.3:-49322410 | None:intergenic |
ATCACCCAGACCTACTTGAA+AGG | 0.545263 | 1.3:+49322058 | MS.gene23960:CDS |
ATTGAAAGGCCGAGAGATGT+TGG | 0.545336 | 1.3:+49318835 | MS.gene23960:CDS |
AGCATCAGTTTGGTCAGTCA+AGG | 0.545645 | 1.3:+49323899 | MS.gene23960:CDS |
TTGGACGAAGGGATTGATGA+GGG | 0.546446 | 1.3:+49318889 | MS.gene23960:CDS |
ATAGTGGGCGCATCAAGCTT+CGG | 0.547105 | 1.3:-49319790 | None:intergenic |
GGTTTCTTGAGCCTGCGAAA+AGG | 0.547778 | 1.3:-49319814 | None:intergenic |
GAGGATCTTCAAGAGGAAAA+GGG | 0.548056 | 1.3:+49323162 | MS.gene23960:CDS |
ATCTGATGAATCGCCAAGCA+GGG | 0.549700 | 1.3:+49323759 | MS.gene23960:CDS |
GCAAATTCGGCTTCAAACAC+AGG | 0.553367 | 1.3:-49321369 | None:intergenic |
AGGCCTGTTCCCTTTCAAGT+AGG | 0.553607 | 1.3:-49322068 | None:intergenic |
TTACATCAGCCTTCATTCGT+CGG | 0.554250 | 1.3:-49321873 | None:intergenic |
ACTCCTGCGACAATGGAAAA+GGG | 0.554706 | 1.3:+49320894 | MS.gene23960:CDS |
CATGGCGAATTGGTCAGAAA+CGG | 0.555011 | 1.3:+49322811 | MS.gene23960:CDS |
TCCATAATCTGGATTGCTGA+AGG | 0.555850 | 1.3:-49322088 | None:intergenic |
ACTCGACGAGGAAGCTTCCA+AGG | 0.555931 | 1.3:+49323567 | MS.gene23960:CDS |
AATTCAATGGATATGCTGCT+GGG | 0.556091 | 1.3:+49323791 | MS.gene23960:CDS |
CTGAAAAGTTTGTCGAAGGA+TGG | 0.557129 | 1.3:+49318994 | MS.gene23960:CDS |
AATTTGTTAGATCCCCTGCT+TGG | 0.557154 | 1.3:-49323772 | None:intergenic |
AGAAGCGACCTGGGCCTGGT+AGG | 0.557357 | 1.3:+49319902 | MS.gene23960:CDS |
AGGTTGGTGTTCAATGGATG+TGG | 0.558382 | 1.3:+49320734 | MS.gene23960:CDS |
GCCCAACCTCCAAGCTGCTT+AGG | 0.559091 | 1.3:+49319755 | MS.gene23960:CDS |
GAGTGAGACCATCCATTCTC+CGG | 0.561533 | 1.3:-49322257 | None:intergenic |
TCTCATCTTCTCCTCATCAT+GGG | 0.561709 | 1.3:-49323545 | None:intergenic |
GAAGGGATTGATGAGGGTGG+TGG | 0.562537 | 1.3:+49318895 | MS.gene23960:CDS |
GTTATGCAGTTCTTGATGAA+GGG | 0.564545 | 1.3:+49321190 | MS.gene23960:CDS |
GGGCATCCATGATCAAATCA+TGG | 0.564800 | 1.3:-49323525 | None:intergenic |
ACCAAACTGATGCTCAAGCC+CGG | 0.569314 | 1.3:-49323890 | None:intergenic |
TTTGGACGAAGGGATTGATG+AGG | 0.569741 | 1.3:+49318888 | MS.gene23960:CDS |
TCACCACTTATGAGCAGCTA+AGG | 0.570969 | 1.3:+49321133 | MS.gene23960:CDS |
CGTATGTAACATTAGAAGGT+GGG | 0.573715 | 1.3:+49320665 | MS.gene23960:CDS |
TTGCTATTGTTTAGCAACTG+GGG | 0.574075 | 1.3:-49323733 | None:intergenic |
AGAAAATGCTAATGGTTGCT+TGG | 0.574593 | 1.3:+49320579 | MS.gene23960:intron |
TCAAGTGCTTAACGTTTGGA+AGG | 0.576802 | 1.3:+49322146 | MS.gene23960:CDS |
ACCTGCGAAGCGGTTTAAGA+CGG | 0.578536 | 1.3:+49319119 | MS.gene23960:CDS |
ATCCTCGGAAGAAACACGCT+TGG | 0.580263 | 1.3:-49319932 | None:intergenic |
GTACACCGCATAATAATGAC+TGG | 0.580968 | 1.3:+49321270 | MS.gene23960:CDS |
AAATTACCTCATCGAAAATG+TGG | 0.582300 | 1.3:-49318551 | None:intergenic |
TATAGTCAAACTGCTGAACT+GGG | 0.584648 | 1.3:+49323098 | MS.gene23960:CDS |
TCGTATGTAACATTAGAAGG+TGG | 0.588323 | 1.3:+49320664 | MS.gene23960:CDS |
ATGCTTCAGGTTGTTGAATG+CGG | 0.589321 | 1.3:-49319633 | None:intergenic |
CCTGACCTTCCTGTCCATGT+AGG | 0.589406 | 1.3:-49323658 | None:intergenic |
AGCCTGCGAAAAGGAATAGT+GGG | 0.589526 | 1.3:-49319805 | None:intergenic |
AGCGTGTTCTTGCTGCCGAT+AGG | 0.590587 | 1.3:+49318929 | MS.gene23960:CDS |
TCTGGCAGCTCTTTCAACAC+TGG | 0.592561 | 1.3:-49319707 | None:intergenic |
GAGTTGCACTGCCAAAGAGC+TGG | 0.593338 | 1.3:+49320757 | MS.gene23960:CDS |
GAGAATGAGAATTTGGACGA+AGG | 0.594788 | 1.3:+49318877 | MS.gene23960:CDS |
CATGAACCATGATTTGATCA+TGG | 0.595013 | 1.3:+49323519 | MS.gene23960:CDS |
AGAGCTGAAAAGTTTGTCGA+AGG | 0.602184 | 1.3:+49318990 | MS.gene23960:CDS |
GACCAAGCGTGTTTCTTCCG+AGG | 0.602699 | 1.3:+49319930 | MS.gene23960:CDS |
TTGCACTGCCAAAGAGCTGG+TGG | 0.602944 | 1.3:+49320760 | MS.gene23960:CDS |
AAACCTCTAGACGACAATGA+GGG | 0.603961 | 1.3:+49319850 | MS.gene23960:CDS |
GAAATATTATCCAAAATTCG+AGG | 0.604404 | 1.3:+49323844 | MS.gene23960:CDS |
AAGAAGCGAGCTGAATCCGA+TGG | 0.605323 | 1.3:+49320988 | MS.gene23960:CDS |
ATGGAAATCCTGAACGCAGT+GGG | 0.608573 | 1.3:+49322106 | MS.gene23960:CDS |
CAAGCTGCTTAGGCCTGAAG+AGG | 0.609805 | 1.3:+49319765 | MS.gene23960:CDS |
GGTTGGTGTTCAATGGATGT+GGG | 0.611364 | 1.3:+49320735 | MS.gene23960:CDS |
TTTAACATATTCTTGAACAG+GGG | 0.611810 | 1.3:-49324084 | None:intergenic |
TTTGCAAGCTAGGGTAACTT+CGG | 0.613149 | 1.3:-49321235 | None:intergenic |
GACGAAGGGATTGATGAGGG+TGG | 0.613569 | 1.3:+49318892 | MS.gene23960:CDS |
CCCCTTCAACTTATGAAAAG+GGG | 0.614862 | 1.3:-49319602 | None:intergenic |
GAGGTGGAGGAAATATTGGA+TGG | 0.616095 | 1.3:+49321988 | MS.gene23960:CDS |
TATAGGCTAGAGAGCGTGCA+TGG | 0.616653 | 1.3:+49322793 | MS.gene23960:intron |
CAAACCTCTAGACGACAATG+AGG | 0.618130 | 1.3:+49319849 | MS.gene23960:CDS |
CAGTTGCTTAACATTGAATG+GGG | 0.622112 | 1.3:+49321168 | MS.gene23960:CDS |
CGGTTCCTACATGGACAGGA+AGG | 0.624331 | 1.3:+49323653 | MS.gene23960:CDS |
TGAAGATGTAAATATTATTG+GGG | 0.625799 | 1.3:+49323046 | MS.gene23960:CDS |
AACCTCTAGACGACAATGAG+GGG | 0.625943 | 1.3:+49319851 | MS.gene23960:CDS |
TGTAGATGTTAGAACTTCCA+GGG | 0.627049 | 1.3:+49323924 | MS.gene23960:CDS |
ACTGGAATAAGCAAGATCGT+TGG | 0.633062 | 1.3:-49319689 | None:intergenic |
ATTCAATGGATATGCTGCTG+GGG | 0.634015 | 1.3:+49323792 | MS.gene23960:CDS |
GTGGAGGAAATATTGGATGG+AGG | 0.634170 | 1.3:+49321991 | MS.gene23960:CDS |
CTTAACGTTTGGAAGGAGCA+GGG | 0.637676 | 1.3:+49322153 | MS.gene23960:CDS |
CCGAAATCATGAAAGCGTCT+CGG | 0.637713 | 1.3:+49323633 | MS.gene23960:CDS |
CCGGTAAATATGTCCACAAG+TGG | 0.639715 | 1.3:-49322238 | None:intergenic |
GTGCACCATCATCTGTTCGG+CGG | 0.643644 | 1.3:+49323689 | MS.gene23960:CDS |
CATACCTGCATATCAGTCGA+AGG | 0.646492 | 1.3:-49322423 | None:intergenic |
TCACGCAGAGGATCTTCAAG+AGG | 0.646752 | 1.3:+49323155 | MS.gene23960:CDS |
ACAGGACAGACAATAATGCT+GGG | 0.649130 | 1.3:-49320868 | None:intergenic |
TCTGATGAATCGCCAAGCAG+GGG | 0.655077 | 1.3:+49323760 | MS.gene23960:CDS |
TCTTCCGAGGATAGACAACT+GGG | 0.655279 | 1.3:+49319943 | MS.gene23960:CDS |
TGTTGTTTACAGGTGTGCGG+TGG | 0.660670 | 1.3:+49321819 | MS.gene23960:intron |
GATCATGGATGCCCATGATG+AGG | 0.675175 | 1.3:+49323534 | MS.gene23960:CDS |
TATGGAAATCCTGAACGCAG+TGG | 0.677894 | 1.3:+49322105 | MS.gene23960:CDS |
TATGCTGTGGATACTTGTAA+CGG | 0.678107 | 1.3:-49321429 | None:intergenic |
ACCTCTAGACGACAATGAGG+GGG | 0.678752 | 1.3:+49319852 | MS.gene23960:CDS |
GGTTCTGAAGATGATGCAGT+TGG | 0.679380 | 1.3:+49323119 | MS.gene23960:CDS |
AGTTTCAACAAATCCAGCAG+AGG | 0.683684 | 1.3:-49319187 | None:intergenic |
TAAGTAAAAGACCTGCGAAG+CGG | 0.684215 | 1.3:+49319109 | MS.gene23960:CDS |
ATATATAGGTTAATCACACG+TGG | 0.685916 | 1.3:+49322843 | MS.gene23960:CDS |
AGTCTGGCTTCAGAACCCAA+TGG | 0.686733 | 1.3:-49324143 | None:intergenic |
GCAGGTTGACAAAAGTAATG+GGG | 0.687470 | 1.3:+49323190 | MS.gene23960:CDS |
AATCGTGTAAAAGTTCAACA+TGG | 0.693558 | 1.3:-49320942 | None:intergenic |
TGGTAAAAGTGAAGAATGTG+AGG | 0.696031 | 1.3:+49318855 | MS.gene23960:CDS |
GTGCACCAGTCATTATTATG+CGG | 0.697429 | 1.3:-49321275 | None:intergenic |
ATTGGCCCACCTGTATGCTG+TGG | 0.700108 | 1.3:-49321442 | None:intergenic |
GAGGAGTTTGAAGAAAACGA+AGG | 0.701495 | 1.3:+49318954 | MS.gene23960:CDS |
GATGATGGCAAATCACGCAG+AGG | 0.722724 | 1.3:+49323143 | MS.gene23960:CDS |
TGAATGTGGATGGAGAAACT+GGG | 0.737142 | 1.3:+49322988 | MS.gene23960:CDS |
GGAGAAGATGAGACTCGACG+AGG | 0.747821 | 1.3:+49323555 | MS.gene23960:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTAAATTATATAATAA+AGG | - | chr1.3:49320178-49320197 | None:intergenic | 0.0% |
!! | TCATATTATCAATAATATAT+TGG | + | chr1.3:49319445-49319464 | MS.gene23960:intron | 10.0% |
!!! | TAATTAAATTTTATCTTTGA+AGG | - | chr1.3:49321630-49321649 | None:intergenic | 10.0% |
!! | AATGTTATTAATTAGATTGT+TGG | + | chr1.3:49321727-49321746 | MS.gene23960:intron | 15.0% |
!! | ATTACAATTTAGAAAATTCT+GGG | - | chr1.3:49321607-49321626 | None:intergenic | 15.0% |
!! | ATTATCAATAATATATTGGA+TGG | + | chr1.3:49319449-49319468 | MS.gene23960:intron | 15.0% |
!! | TAATAGAATATGAATAATTG+AGG | + | chr1.3:49320014-49320033 | MS.gene23960:intron | 15.0% |
!!! | AAATATCTTTTGTTTGTTAT+CGG | + | chr1.3:49320212-49320231 | MS.gene23960:intron | 15.0% |
!!! | AATATTATTTTGTTGTTTAC+AGG | + | chr1.3:49321809-49321828 | MS.gene23960:intron | 15.0% |
!!! | CTTTTATGTTTCTTTTATTT+TGG | + | chr1.3:49321469-49321488 | MS.gene23960:intron | 15.0% |
!! | AAGAAACATAAAAGAAACAT+TGG | - | chr1.3:49321463-49321482 | None:intergenic | 20.0% |
!! | AATTGAATCTGAAAATTATC+AGG | - | chr1.3:49322725-49322744 | None:intergenic | 20.0% |
!! | ATTCAAATTATTTGGTATGT+TGG | - | chr1.3:49321792-49321811 | None:intergenic | 20.0% |
!! | ATTGAATCTGAAAATTATCA+GGG | - | chr1.3:49322724-49322743 | None:intergenic | 20.0% |
!! | CTATATTAGATTGTACATAT+TGG | + | chr1.3:49323417-49323436 | MS.gene23960:intron | 20.0% |
!! | CTGAAGATGTAAATATTATT+GGG | + | chr1.3:49323045-49323064 | MS.gene23960:CDS | 20.0% |
!! | GAATCAAATTTGAACTTTAA+AGG | + | chr1.3:49319489-49319508 | MS.gene23960:intron | 20.0% |
!! | GATTACAATTTAGAAAATTC+TGG | - | chr1.3:49321608-49321627 | None:intergenic | 20.0% |
!! | GTCTAAAAATACAAGAAAAT+GGG | + | chr1.3:49321065-49321084 | MS.gene23960:CDS | 20.0% |
!! | TCTGAAGATGTAAATATTAT+TGG | + | chr1.3:49323044-49323063 | MS.gene23960:CDS | 20.0% |
!! | TGAAGATGTAAATATTATTG+GGG | + | chr1.3:49323046-49323065 | MS.gene23960:CDS | 20.0% |
!! | TTACAATTTAGAAAATTCTG+GGG | - | chr1.3:49321606-49321625 | None:intergenic | 20.0% |
!! | TTCAAATTATTTGGTATGTT+GGG | - | chr1.3:49321791-49321810 | None:intergenic | 20.0% |
!!! | AGTTATCTTTAGTTTAGTTA+AGG | + | chr1.3:49319044-49319063 | MS.gene23960:CDS | 20.0% |
!!! | CATTTTCTTGTATTTTTAGA+CGG | - | chr1.3:49321066-49321085 | None:intergenic | 20.0% |
!!! | CTTTTATTTGAGCATATTAT+TGG | + | chr1.3:49323318-49323337 | MS.gene23960:intron | 20.0% |
!!! | TGATTCTTTGTTTTTATTGT+TGG | + | chr1.3:49320270-49320289 | MS.gene23960:intron | 20.0% |
! | AAAAATGTCAAGCATTTGTT+GGG | - | chr1.3:49322205-49322224 | None:intergenic | 25.0% |
! | AAAAGTTCAACATGGAATTT+AGG | - | chr1.3:49320937-49320956 | None:intergenic | 25.0% |
! | AAGTAGTTGAAATTGAAACA+TGG | + | chr1.3:49322475-49322494 | MS.gene23960:intron | 25.0% |
! | AATATGAATAATTGAGGTAG+TGG | + | chr1.3:49320020-49320039 | MS.gene23960:intron | 25.0% |
! | AATGAAAACAAAAATCTCAC+TGG | - | chr1.3:49322325-49322344 | None:intergenic | 25.0% |
! | ACAAAGAATCATTACAAAAG+AGG | - | chr1.3:49320261-49320280 | None:intergenic | 25.0% |
! | AGTCTTTATTACTCATAAAC+TGG | + | chr1.3:49321572-49321591 | MS.gene23960:intron | 25.0% |
! | ATATGAATAATTGAGGTAGT+GGG | + | chr1.3:49320021-49320040 | MS.gene23960:intron | 25.0% |
! | ATCTGAATACAGATTCAAAA+AGG | + | chr1.3:49319875-49319894 | MS.gene23960:CDS | 25.0% |
! | ATCTTTCAATTCATCATCAT+TGG | - | chr1.3:49320384-49320403 | None:intergenic | 25.0% |
! | ATGGAAAAACAGTGAATAAA+AGG | - | chr1.3:49322508-49322527 | None:intergenic | 25.0% |
! | ATTGTTGGCATATTTCATAT+AGG | + | chr1.3:49321742-49321761 | MS.gene23960:intron | 25.0% |
! | CGTCTAAAAATACAAGAAAA+TGG | + | chr1.3:49321064-49321083 | MS.gene23960:CDS | 25.0% |
! | CTTTAACATATTCTTGAACA+GGG | - | chr1.3:49324088-49324107 | None:intergenic | 25.0% |
! | GAAATATTATCCAAAATTCG+AGG | + | chr1.3:49323844-49323863 | MS.gene23960:CDS | 25.0% |
! | GTAGATTAAAAAAATCAGCT+TGG | + | chr1.3:49321503-49321522 | MS.gene23960:intron | 25.0% |
! | TATGTTTGTATCTAACATGT+CGG | + | chr1.3:49322442-49322461 | MS.gene23960:intron | 25.0% |
! | TCAAATTATTTGGTATGTTG+GGG | - | chr1.3:49321790-49321809 | None:intergenic | 25.0% |
! | TCATATAACAAGTTTATCAG+AGG | - | chr1.3:49323488-49323507 | None:intergenic | 25.0% |
! | TCTAATATAGTCTGAATATG+TGG | - | chr1.3:49323407-49323426 | None:intergenic | 25.0% |
! | TTACAGTTACTGAAGATAAA+GGG | + | chr1.3:49318689-49318708 | MS.gene23960:CDS | 25.0% |
! | TTGAATCTGAAAATTATCAG+GGG | - | chr1.3:49322723-49322742 | None:intergenic | 25.0% |
! | TTGTTGGCATATTTCATATA+GGG | + | chr1.3:49321743-49321762 | MS.gene23960:intron | 25.0% |
! | TTTAACATATTCTTGAACAG+GGG | - | chr1.3:49324087-49324106 | None:intergenic | 25.0% |
! | TTTATTGCAGAAAATGCTAA+TGG | + | chr1.3:49320571-49320590 | MS.gene23960:intron | 25.0% |
! | TTTGAGTAAAAAGAAGAACA+CGG | - | chr1.3:49322182-49322201 | None:intergenic | 25.0% |
!! | AAAAGTCTTTTTGATGCTAA+TGG | + | chr1.3:49323236-49323255 | MS.gene23960:CDS | 25.0% |
!! | AAAGTCTTTTTGATGCTAAT+GGG | + | chr1.3:49323237-49323256 | MS.gene23960:CDS | 25.0% |
!! | AGAGCAATAGAATTTGAAAT+TGG | + | chr1.3:49318796-49318815 | MS.gene23960:CDS | 25.0% |
!! | ATACAAGTATTGTCATTTCT+GGG | + | chr1.3:49320817-49320836 | MS.gene23960:CDS | 25.0% |
!! | ATGTCATGTTCTTATTTATC+TGG | + | chr1.3:49319976-49319995 | MS.gene23960:intron | 25.0% |
!! | TATACAAGTATTGTCATTTC+TGG | + | chr1.3:49320816-49320835 | MS.gene23960:CDS | 25.0% |
!! | TGAACTTTAAAGGATATAGT+TGG | + | chr1.3:49319499-49319518 | MS.gene23960:intron | 25.0% |
!! | TGTCATGTTCTTATTTATCT+GGG | + | chr1.3:49319977-49319996 | MS.gene23960:intron | 25.0% |
!! | TGTTTGTAGTTTGTACAATA+AGG | + | chr1.3:49319252-49319271 | MS.gene23960:intron | 25.0% |
!!! | ATCTTCTTATAGAGCATTTT+TGG | + | chr1.3:49321957-49321976 | MS.gene23960:CDS | 25.0% |
!!! | ATGAGAGTGTTGATTTTTAT+AGG | + | chr1.3:49318651-49318670 | MS.gene23960:intron | 25.0% |
!!! | ATTTTCGTTGTTTGTTTTTC+AGG | + | chr1.3:49319546-49319565 | MS.gene23960:intron | 25.0% |
!!! | TCATTTTAACAACCAAAGTT+GGG | + | chr1.3:49322340-49322359 | MS.gene23960:CDS | 25.0% |
!!! | TGTCTGGATGTTTTTTTAAA+GGG | + | chr1.3:49322545-49322564 | MS.gene23960:intron | 25.0% |
!!! | TTCATTTTAACAACCAAAGT+TGG | + | chr1.3:49322339-49322358 | MS.gene23960:CDS | 25.0% |
!!! | TTTTATTTTGGTTTCGATGA+GGG | + | chr1.3:49321481-49321500 | MS.gene23960:intron | 25.0% |
AAAAAGATCCTTCATATCTC+GGG | - | chr1.3:49322964-49322983 | None:intergenic | 30.0% | |
AAAAGGAAAGAAACTGAATG+AGG | - | chr1.3:49322668-49322687 | None:intergenic | 30.0% | |
AAATTACCTCATCGAAAATG+TGG | - | chr1.3:49318554-49318573 | None:intergenic | 30.0% | |
AAATTATTTGGTATGTTGGG+GGG | - | chr1.3:49321788-49321807 | None:intergenic | 30.0% | |
AACGGGATGTAACTATATAT+AGG | + | chr1.3:49322829-49322848 | MS.gene23960:CDS | 30.0% | |
AATCGTGTAAAAGTTCAACA+TGG | - | chr1.3:49320945-49320964 | None:intergenic | 30.0% | |
AGAGCTTCAAATATGTTATC+AGG | - | chr1.3:49320700-49320719 | None:intergenic | 30.0% | |
ATATATAGGTTAATCACACG+TGG | + | chr1.3:49322843-49322862 | MS.gene23960:CDS | 30.0% | |
ATCTCATGACACGATTAATT+AGG | - | chr1.3:49321095-49321114 | None:intergenic | 30.0% | |
CAAAAAGATCCTTCATATCT+CGG | - | chr1.3:49322965-49322984 | None:intergenic | 30.0% | |
CAAAAATGTCAAGCATTTGT+TGG | - | chr1.3:49322206-49322225 | None:intergenic | 30.0% | |
CAAATTATTTGGTATGTTGG+GGG | - | chr1.3:49321789-49321808 | None:intergenic | 30.0% | |
CCTGTTCAAGAATATGTTAA+AGG | + | chr1.3:49324086-49324105 | MS.gene23960:CDS | 30.0% | |
CCTTTAACATATTCTTGAAC+AGG | - | chr1.3:49324089-49324108 | None:intergenic | 30.0% | |
CTTCCTAGCAAGTAATAAAT+TGG | + | chr1.3:49320072-49320091 | MS.gene23960:intron | 30.0% | |
GAAACCAGTACATTGAAAAA+GGG | - | chr1.3:49323466-49323485 | None:intergenic | 30.0% | |
GAGCTTCAAATATGTTATCA+GGG | - | chr1.3:49320699-49320718 | None:intergenic | 30.0% | |
GGTATATCTGAATTCTTAAG+AGG | + | chr1.3:49320113-49320132 | MS.gene23960:intron | 30.0% | |
GTTACAGTTACTGAAGATAA+AGG | + | chr1.3:49318688-49318707 | MS.gene23960:CDS | 30.0% | |
TCATCTATAAGCTTCTTCTT+CGG | - | chr1.3:49319081-49319100 | None:intergenic | 30.0% | |
TCTCATGACACGATTAATTA+GGG | - | chr1.3:49321094-49321113 | None:intergenic | 30.0% | |
TCTTATAGGAACTGCAAATT+CGG | - | chr1.3:49321385-49321404 | None:intergenic | 30.0% | |
TCTTCGTATGTAACATTAGA+AGG | + | chr1.3:49320661-49320680 | MS.gene23960:CDS | 30.0% | |
TGTACTTAGATTGATGGAAA+AGG | - | chr1.3:49322685-49322704 | None:intergenic | 30.0% | |
TGTATTCCTATAACTCCAAT+AGG | + | chr1.3:49320049-49320068 | MS.gene23960:intron | 30.0% | |
TTAGAGTGTACTTAGATTGA+TGG | - | chr1.3:49322691-49322710 | None:intergenic | 30.0% | |
TTATCTTCAGTAACTGTAAC+TGG | - | chr1.3:49318688-49318707 | None:intergenic | 30.0% | |
TTCTTCTAAACTTTCACAAC+TGG | - | chr1.3:49320611-49320630 | None:intergenic | 30.0% | |
TTTATGAGTAGTATGCAAGT+CGG | + | chr1.3:49320340-49320359 | MS.gene23960:intron | 30.0% | |
! | ACTTTAAAGGATATAGTTGG+TGG | + | chr1.3:49319502-49319521 | MS.gene23960:intron | 30.0% |
! | ATTTTCCGAATCATTACTTC+AGG | - | chr1.3:49323976-49323995 | None:intergenic | 30.0% |
! | GTCATGTTCTTATTTATCTG+GGG | + | chr1.3:49319978-49319997 | MS.gene23960:intron | 30.0% |
! | TTCTTGATTACCTCGAATTT+TGG | - | chr1.3:49323857-49323876 | None:intergenic | 30.0% |
! | TTGATGAAGGGCATAAAATT+AGG | + | chr1.3:49321202-49321221 | MS.gene23960:CDS | 30.0% |
! | TTTGATAACTTCATCTTTCC+TGG | - | chr1.3:49321696-49321715 | None:intergenic | 30.0% |
!! | AAAACAGAGAATGGCTTTAA+TGG | + | chr1.3:49322284-49322303 | MS.gene23960:CDS | 30.0% |
!! | ATTTTAACAACCAAAGTTGG+GGG | + | chr1.3:49322342-49322361 | MS.gene23960:CDS | 30.0% |
!! | CATTTTAACAACCAAAGTTG+GGG | + | chr1.3:49322341-49322360 | MS.gene23960:CDS | 30.0% |
!! | TTGAAAAAGGGAGTACTAAA+AGG | - | chr1.3:49323454-49323473 | None:intergenic | 30.0% |
!! | TTTGCTATTGTTTAGCAACT+GGG | - | chr1.3:49323737-49323756 | None:intergenic | 30.0% |
!! | TTTGTTTTCCCTGGAAAATT+GGG | + | chr1.3:49321339-49321358 | MS.gene23960:CDS | 30.0% |
!!! | CTTTTATTTTGGTTTCGATG+AGG | + | chr1.3:49321480-49321499 | MS.gene23960:intron | 30.0% |
!!! | CTTTTTGTTTTGAATGTGGA+TGG | + | chr1.3:49322978-49322997 | MS.gene23960:CDS | 30.0% |
!!! | GGATCTTTTTGTTTTGAATG+TGG | + | chr1.3:49322974-49322993 | MS.gene23960:CDS | 30.0% |
!!! | GTCTGGATGTTTTTTTAAAG+GGG | + | chr1.3:49322546-49322565 | MS.gene23960:intron | 30.0% |
!!! | GTGTCTGGATGTTTTTTTAA+AGG | + | chr1.3:49322544-49322563 | MS.gene23960:intron | 30.0% |
!!! | GTTGTTTGTTTTTCAGGAAA+GGG | + | chr1.3:49319552-49319571 | MS.gene23960:intron | 30.0% |
!!! | TCTGGATGTTTTTTTAAAGG+GGG | + | chr1.3:49322547-49322566 | MS.gene23960:intron | 30.0% |
!!! | TTTTGTTTTCCCTGGAAAAT+TGG | + | chr1.3:49321338-49321357 | MS.gene23960:CDS | 30.0% |
AAACGAAAAATGGGGAAAAC+CGG | + | chr1.3:49322570-49322589 | MS.gene23960:intron | 35.0% | |
AAATAGCGACTCTGCATAAA+GGG | + | chr1.3:49324109-49324128 | MS.gene23960:CDS | 35.0% | |
AAATTCAATGGATATGCTGC+TGG | + | chr1.3:49323790-49323809 | MS.gene23960:CDS | 35.0% | |
AACCCCTTCAACTTATGAAA+AGG | - | chr1.3:49319607-49319626 | None:intergenic | 35.0% | |
AATTCAATGGATATGCTGCT+GGG | + | chr1.3:49323791-49323810 | MS.gene23960:CDS | 35.0% | |
ACAGCAGAAAAGGTTCTTTA+AGG | + | chr1.3:49322938-49322957 | MS.gene23960:CDS | 35.0% | |
ACCAGTTGCTTAACATTGAA+TGG | + | chr1.3:49321166-49321185 | MS.gene23960:CDS | 35.0% | |
ACCCCTTCAACTTATGAAAA+GGG | - | chr1.3:49319606-49319625 | None:intergenic | 35.0% | |
AGAAAATGCTAATGGTTGCT+TGG | + | chr1.3:49320579-49320598 | MS.gene23960:intron | 35.0% | |
AGAACAAACTGAGTGAGTTA+TGG | + | chr1.3:49321304-49321323 | MS.gene23960:CDS | 35.0% | |
AGAATGAGAATTTGGACGAA+GGG | + | chr1.3:49318878-49318897 | MS.gene23960:CDS | 35.0% | |
AGATATACCGATATACCATC+AGG | - | chr1.3:49320102-49320121 | None:intergenic | 35.0% | |
AGCTCTGTTTGACTATCAAA+AGG | + | chr1.3:49320714-49320733 | MS.gene23960:CDS | 35.0% | |
AGGGATGAATTGGTTAGAAA+AGG | + | chr1.3:49319571-49319590 | MS.gene23960:CDS | 35.0% | |
AGGGGATCTAACAAATTCAA+TGG | + | chr1.3:49323778-49323797 | MS.gene23960:CDS | 35.0% | |
ATATAGTCAAACTGCTGAAC+TGG | + | chr1.3:49323097-49323116 | MS.gene23960:CDS | 35.0% | |
ATGCACGATAATTTAGATGC+AGG | - | chr1.3:49323293-49323312 | None:intergenic | 35.0% | |
ATGTGAGGAGAATGAGAATT+TGG | + | chr1.3:49318870-49318889 | MS.gene23960:CDS | 35.0% | |
CAGTTGCTTAACATTGAATG+GGG | + | chr1.3:49321168-49321187 | MS.gene23960:CDS | 35.0% | |
CAGTTTCTTCGACAATTGAA+AGG | + | chr1.3:49318821-49318840 | MS.gene23960:CDS | 35.0% | |
CATGAACCATGATTTGATCA+TGG | + | chr1.3:49323519-49323538 | MS.gene23960:CDS | 35.0% | |
CATGATCAAATCATGGTTCA+TGG | - | chr1.3:49323521-49323540 | None:intergenic | 35.0% | |
CCAGTTGCTTAACATTGAAT+GGG | + | chr1.3:49321167-49321186 | MS.gene23960:CDS | 35.0% | |
CGAATTCTGCTTTCTACTTT+AGG | + | chr1.3:49318495-49318514 | MS.gene23960:CDS | 35.0% | |
CGTATGTAACATTAGAAGGT+GGG | + | chr1.3:49320665-49320684 | MS.gene23960:CDS | 35.0% | |
CTATAAGAAGATACTTGCTC+TGG | - | chr1.3:49321949-49321968 | None:intergenic | 35.0% | |
CTGCCAATTTATTACTTGCT+AGG | - | chr1.3:49320078-49320097 | None:intergenic | 35.0% | |
CTGTTTGACTATCAAAAGGT+TGG | + | chr1.3:49320718-49320737 | MS.gene23960:CDS | 35.0% | |
GAAAACAAAAATCTCACTGG+AGG | - | chr1.3:49322322-49322341 | None:intergenic | 35.0% | |
GAAACTGAATGAGGTGATAA+AGG | - | chr1.3:49322659-49322678 | None:intergenic | 35.0% | |
GAAGATACAAGTCAAATGCA+CGG | - | chr1.3:49319335-49319354 | None:intergenic | 35.0% | |
GAGAAATATTTGACCACTTG+TGG | + | chr1.3:49322225-49322244 | MS.gene23960:CDS | 35.0% | |
GGAAACCAGTACATTGAAAA+AGG | - | chr1.3:49323467-49323486 | None:intergenic | 35.0% | |
GTTATGCAGTTCTTGATGAA+GGG | + | chr1.3:49321190-49321209 | MS.gene23960:CDS | 35.0% | |
TAAAGGGGGAAACGAAAAAT+GGG | + | chr1.3:49322561-49322580 | MS.gene23960:intron | 35.0% | |
TAATAAATTGGCAGTCCTGA+TGG | + | chr1.3:49320084-49320103 | MS.gene23960:intron | 35.0% | |
TATAGTCAAACTGCTGAACT+GGG | + | chr1.3:49323098-49323117 | MS.gene23960:CDS | 35.0% | |
TATGAGCAGCTAAGGATATT+GGG | + | chr1.3:49321141-49321160 | MS.gene23960:CDS | 35.0% | |
TATGCTGTGGATACTTGTAA+CGG | - | chr1.3:49321432-49321451 | None:intergenic | 35.0% | |
TCCAACCTGAAGTAATGATT+CGG | + | chr1.3:49323968-49323987 | MS.gene23960:CDS | 35.0% | |
TCGTATGTAACATTAGAAGG+TGG | + | chr1.3:49320664-49320683 | MS.gene23960:CDS | 35.0% | |
TCTCAACTTCTGATGAAGTT+CGG | - | chr1.3:49318779-49318798 | None:intergenic | 35.0% | |
TGGTAAAAGTGAAGAATGTG+AGG | + | chr1.3:49318855-49318874 | MS.gene23960:CDS | 35.0% | |
TGTAGATGTTAGAACTTCCA+GGG | + | chr1.3:49323924-49323943 | MS.gene23960:CDS | 35.0% | |
TTAAAGGGGGAAACGAAAAA+TGG | + | chr1.3:49322560-49322579 | MS.gene23960:intron | 35.0% | |
TTATGAGCAGCTAAGGATAT+TGG | + | chr1.3:49321140-49321159 | MS.gene23960:CDS | 35.0% | |
TTTGCAGTTCCTATAAGAGT+TGG | + | chr1.3:49321387-49321406 | MS.gene23960:CDS | 35.0% | |
! | AAAGCCATTCTCTGTTTTAC+AGG | - | chr1.3:49322282-49322301 | None:intergenic | 35.0% |
! | AAGCAGGTTGACAAAAGTAA+TGG | + | chr1.3:49323188-49323207 | MS.gene23960:CDS | 35.0% |
! | AGCAGGTTGACAAAAGTAAT+GGG | + | chr1.3:49323189-49323208 | MS.gene23960:CDS | 35.0% |
! | GTTATCGGTGTTTGTTTATC+TGG | + | chr1.3:49320227-49320246 | MS.gene23960:intron | 35.0% |
! | TAAAGAACCTTTTCTGCTGT+GGG | - | chr1.3:49322938-49322957 | None:intergenic | 35.0% |
! | TCACTCAGTTTGTTCTGAAT+AGG | - | chr1.3:49321300-49321319 | None:intergenic | 35.0% |
! | TGTACCTTTTTCCAACAGAA+AGG | + | chr1.3:49323997-49324016 | MS.gene23960:CDS | 35.0% |
! | TTAAAGAACCTTTTCTGCTG+TGG | - | chr1.3:49322939-49322958 | None:intergenic | 35.0% |
! | TTCTTATTTATCTGGGGCAA+AGG | + | chr1.3:49319984-49320003 | MS.gene23960:intron | 35.0% |
! | TTGCTATTGTTTAGCAACTG+GGG | - | chr1.3:49323736-49323755 | None:intergenic | 35.0% |
! | TTTTAACAACCAAAGTTGGG+GGG | + | chr1.3:49322343-49322362 | MS.gene23960:CDS | 35.0% |
!! | ACCCCTTTTCATAAGTTGAA+GGG | + | chr1.3:49319601-49319620 | MS.gene23960:CDS | 35.0% |
!! | ATCAAAAGGTTGGTGTTCAA+TGG | + | chr1.3:49320728-49320747 | MS.gene23960:CDS | 35.0% |
!! | CTTTGCTATTGTTTAGCAAC+TGG | - | chr1.3:49323738-49323757 | None:intergenic | 35.0% |
!! | GGAATTATTGGTGATGAGAT+GGG | + | chr1.3:49320781-49320800 | MS.gene23960:CDS | 35.0% |
!! | TCACTTTTACCAACATCTCT+CGG | - | chr1.3:49318847-49318866 | None:intergenic | 35.0% |
!! | TGGAATTATTGGTGATGAGA+TGG | + | chr1.3:49320780-49320799 | MS.gene23960:CDS | 35.0% |
!! | TGGTTGGTTGTGAATTTTGA+TGG | + | chr1.3:49319375-49319394 | MS.gene23960:intron | 35.0% |
!! | TTTTCAGGAAAGGGATGAAT+TGG | + | chr1.3:49319561-49319580 | MS.gene23960:intron | 35.0% |
!!! | CGTTGTTTGTTTTTCAGGAA+AGG | + | chr1.3:49319551-49319570 | MS.gene23960:intron | 35.0% |
!!! | TACTCCCTTTTTCAATGTAC+TGG | + | chr1.3:49323459-49323478 | MS.gene23960:intron | 35.0% |
!!! | TTGTTCGATTTTGTTTTCCC+TGG | + | chr1.3:49321330-49321349 | MS.gene23960:CDS | 35.0% |
!!! | TTTTGTTGTTTACAGGTGTG+CGG | + | chr1.3:49321816-49321835 | MS.gene23960:intron | 35.0% |
AAAAGGAAAAAGAAGCGACC+TGG | + | chr1.3:49319892-49319911 | MS.gene23960:CDS | 40.0% | |
AAAATTCACAACCAACCACG+TGG | - | chr1.3:49319373-49319392 | None:intergenic | 40.0% | |
AAACCTCTAGACGACAATGA+GGG | + | chr1.3:49319850-49319869 | MS.gene23960:CDS | 40.0% | |
AAAGGAAAAAGAAGCGACCT+GGG | + | chr1.3:49319893-49319912 | MS.gene23960:CDS | 40.0% | |
AAAGGGGGAAACGAAAAATG+GGG | + | chr1.3:49322562-49322581 | MS.gene23960:intron | 40.0% | |
AAATTCACAACCAACCACGT+GGG | - | chr1.3:49319372-49319391 | None:intergenic | 40.0% | |
AACAGGACAGACAATAATGC+TGG | - | chr1.3:49320872-49320891 | None:intergenic | 40.0% | |
AAGAGGAAAAGGGAAAAAGC+AGG | + | chr1.3:49323172-49323191 | MS.gene23960:CDS | 40.0% | |
AAGATACTTGCTCTGGTGTA+AGG | - | chr1.3:49321942-49321961 | None:intergenic | 40.0% | |
AATCACACGTGGAACTATAG+AGG | + | chr1.3:49322854-49322873 | MS.gene23960:CDS | 40.0% | |
ACAGGACAGACAATAATGCT+GGG | - | chr1.3:49320871-49320890 | None:intergenic | 40.0% | |
ACTCTGCATAAAGGGTCAAA+TGG | + | chr1.3:49324117-49324136 | MS.gene23960:CDS | 40.0% | |
ACTGAATGAGGTGATAAAGG+AGG | - | chr1.3:49322656-49322675 | None:intergenic | 40.0% | |
ACTGGAATAAGCAAGATCGT+TGG | - | chr1.3:49319692-49319711 | None:intergenic | 40.0% | |
AGAGCTGAAAAGTTTGTCGA+AGG | + | chr1.3:49318990-49319009 | MS.gene23960:CDS | 40.0% | |
AGAGGATCTTCAAGAGGAAA+AGG | + | chr1.3:49323161-49323180 | MS.gene23960:CDS | 40.0% | |
AGAGGTTTGGGTAATTGCAT+TGG | - | chr1.3:49319838-49319857 | None:intergenic | 40.0% | |
AGGAAGCCTATTGGAGTTAT+AGG | - | chr1.3:49320058-49320077 | None:intergenic | 40.0% | |
AGTTTCAACAAATCCAGCAG+AGG | - | chr1.3:49319190-49319209 | None:intergenic | 40.0% | |
ATTCAATGGATATGCTGCTG+GGG | + | chr1.3:49323792-49323811 | MS.gene23960:CDS | 40.0% | |
CAAAGAGCTGGTGGAATTAT+TGG | + | chr1.3:49320769-49320788 | MS.gene23960:CDS | 40.0% | |
CAATAATTCCACCAGCTCTT+TGG | - | chr1.3:49320771-49320790 | None:intergenic | 40.0% | |
CACTCCTGTAAAACAGAGAA+TGG | + | chr1.3:49322275-49322294 | MS.gene23960:CDS | 40.0% | |
CAGCATAGTTCAGCATTTCA+AGG | + | chr1.3:49324038-49324057 | MS.gene23960:CDS | 40.0% | |
CATATTTACCGGAGAATGGA+TGG | + | chr1.3:49322249-49322268 | MS.gene23960:CDS | 40.0% | |
CATTCACCTATTGAGATCCT+AGG | + | chr1.3:49321666-49321685 | MS.gene23960:intron | 40.0% | |
CCACTTGTGGACATATTTAC+CGG | + | chr1.3:49322238-49322257 | MS.gene23960:CDS | 40.0% | |
CCCATTCAATGTTAAGCAAC+TGG | - | chr1.3:49321170-49321189 | None:intergenic | 40.0% | |
CCCCTTCAACTTATGAAAAG+GGG | - | chr1.3:49319605-49319624 | None:intergenic | 40.0% | |
CGTTCAGGATTTCCATAATC+TGG | - | chr1.3:49322102-49322121 | None:intergenic | 40.0% | |
CTAGCGCCTAATTTCAAATG+TGG | - | chr1.3:49321529-49321548 | None:intergenic | 40.0% | |
CTGAAAAGTTTGTCGAAGGA+TGG | + | chr1.3:49318994-49319013 | MS.gene23960:CDS | 40.0% | |
CTGTAGATGTTAGAACTTCC+AGG | + | chr1.3:49323923-49323942 | MS.gene23960:CDS | 40.0% | |
CTTCAAACTCCTCAACCTAT+CGG | - | chr1.3:49318947-49318966 | None:intergenic | 40.0% | |
GAAATAGCGACTCTGCATAA+AGG | + | chr1.3:49324108-49324127 | MS.gene23960:CDS | 40.0% | |
GAAGAAAACGAAGGCTCAAT+TGG | + | chr1.3:49318963-49318982 | MS.gene23960:CDS | 40.0% | |
GAATATCCGCCAACTCTTAT+AGG | - | chr1.3:49321399-49321418 | None:intergenic | 40.0% | |
GAGAATGAGAATTTGGACGA+AGG | + | chr1.3:49318877-49318896 | MS.gene23960:CDS | 40.0% | |
GAGGAGTTTGAAGAAAACGA+AGG | + | chr1.3:49318954-49318973 | MS.gene23960:CDS | 40.0% | |
GAGGATCTTCAAGAGGAAAA+GGG | + | chr1.3:49323162-49323181 | MS.gene23960:CDS | 40.0% | |
GAGTAAAAAGAAGAACACGG+TGG | - | chr1.3:49322179-49322198 | None:intergenic | 40.0% | |
GATATCGGATCAACGATTTC+AGG | - | chr1.3:49318745-49318764 | None:intergenic | 40.0% | |
GGAAAAGGGAAGCTAAAAAG+TGG | + | chr1.3:49320908-49320927 | MS.gene23960:CDS | 40.0% | |
GGTTATGCAGTTCTTGATGA+AGG | + | chr1.3:49321189-49321208 | MS.gene23960:CDS | 40.0% | |
GTACACCGCATAATAATGAC+TGG | + | chr1.3:49321270-49321289 | MS.gene23960:CDS | 40.0% | |
GTGCACCAGTCATTATTATG+CGG | - | chr1.3:49321278-49321297 | None:intergenic | 40.0% | |
TAAGTAAAAGACCTGCGAAG+CGG | + | chr1.3:49319109-49319128 | MS.gene23960:CDS | 40.0% | |
TACAAGTATCCACAGCATAC+AGG | + | chr1.3:49321433-49321452 | MS.gene23960:CDS | 40.0% | |
TACAGCAAGCAAAGTAGTCT+GGG | - | chr1.3:49320486-49320505 | None:intergenic | 40.0% | |
TAGCTCAAGTGCTTAACGTT+TGG | + | chr1.3:49322142-49322161 | MS.gene23960:CDS | 40.0% | |
TAGTTCAGCATTTCAAGGAC+AGG | + | chr1.3:49324043-49324062 | MS.gene23960:CDS | 40.0% | |
TATCCTTAGCTGCTCATAAG+TGG | - | chr1.3:49321139-49321158 | None:intergenic | 40.0% | |
TCAAGTGCTTAACGTTTGGA+AGG | + | chr1.3:49322146-49322165 | MS.gene23960:CDS | 40.0% | |
TCATTGTCGTCTAGAGGTTT+GGG | - | chr1.3:49319850-49319869 | None:intergenic | 40.0% | |
TCCATAATCTGGATTGCTGA+AGG | - | chr1.3:49322091-49322110 | None:intergenic | 40.0% | |
TCCGAATCATTACTTCAGGT+TGG | - | chr1.3:49323972-49323991 | None:intergenic | 40.0% | |
TCTCATCTTCTCCTCATCAT+GGG | - | chr1.3:49323548-49323567 | None:intergenic | 40.0% | |
TGAATGTGGATGGAGAAACT+GGG | + | chr1.3:49322988-49323007 | MS.gene23960:CDS | 40.0% | |
TGATCATCTTTGACCCTGAT+TGG | + | chr1.3:49322397-49322416 | MS.gene23960:CDS | 40.0% | |
TGGACATATTTACCGGAGAA+TGG | + | chr1.3:49322245-49322264 | MS.gene23960:CDS | 40.0% | |
TTACATCAGCCTTCATTCGT+CGG | - | chr1.3:49321876-49321895 | None:intergenic | 40.0% | |
TTATCTTCTCCGACGAATGA+AGG | + | chr1.3:49321864-49321883 | MS.gene23960:CDS | 40.0% | |
TTCATTCGTCGGAGAAGATA+AGG | - | chr1.3:49321865-49321884 | None:intergenic | 40.0% | |
TTGAATGTGGATGGAGAAAC+TGG | + | chr1.3:49322987-49323006 | MS.gene23960:CDS | 40.0% | |
TTGTAGCTGTTTGCAAGCTA+GGG | - | chr1.3:49321247-49321266 | None:intergenic | 40.0% | |
TTTGCAAGCTAGGGTAACTT+CGG | - | chr1.3:49321238-49321257 | None:intergenic | 40.0% | |
TTTGTAGCTGTTTGCAAGCT+AGG | - | chr1.3:49321248-49321267 | None:intergenic | 40.0% | |
! | AACAGGGGAAGATCTTTTGA+GGG | - | chr1.3:49324072-49324091 | None:intergenic | 40.0% |
! | ACCTTTTTCCAACAGAAAGG+TGG | + | chr1.3:49324000-49324019 | MS.gene23960:CDS | 40.0% |
! | ACTTTTACACGATTCTGCTC+AGG | + | chr1.3:49320951-49320970 | MS.gene23960:CDS | 40.0% |
! | AGAACGTGCTCAGTTTTCTT+TGG | - | chr1.3:49321910-49321929 | None:intergenic | 40.0% |
! | GCAAAACACCCAATTTTCCA+GGG | - | chr1.3:49321350-49321369 | None:intergenic | 40.0% |
! | GCAGGTTGACAAAAGTAATG+GGG | + | chr1.3:49323190-49323209 | MS.gene23960:CDS | 40.0% |
! | GCTTGGCCACATTTGAAATT+AGG | + | chr1.3:49321520-49321539 | MS.gene23960:intron | 40.0% |
! | TGGACTCCAGATGAATTTTC+AGG | - | chr1.3:49323952-49323971 | None:intergenic | 40.0% |
! | TTACGACTAGTTGATGCTTC+AGG | - | chr1.3:49319649-49319668 | None:intergenic | 40.0% |
! | TTACTTGCTAGGAAGCCTAT+TGG | - | chr1.3:49320067-49320086 | None:intergenic | 40.0% |
!! | AATTTGTTAGATCCCCTGCT+TGG | - | chr1.3:49323775-49323794 | None:intergenic | 40.0% |
!! | ATGCTTCAGGTTGTTGAATG+CGG | - | chr1.3:49319636-49319655 | None:intergenic | 40.0% |
!! | CACCCCTTTTCATAAGTTGA+AGG | + | chr1.3:49319600-49319619 | MS.gene23960:CDS | 40.0% |
!! | CCCCTTTTCATAAGTTGAAG+GGG | + | chr1.3:49319602-49319621 | MS.gene23960:CDS | 40.0% |
!! | TCGGCTTTAGCTTTCGATAT+CGG | - | chr1.3:49318760-49318779 | None:intergenic | 40.0% |
AACCTCTAGACGACAATGAG+GGG | + | chr1.3:49319851-49319870 | MS.gene23960:CDS | 45.0% | |
AAGAAAAAGCCATCAGTGCC+GGG | + | chr1.3:49323872-49323891 | MS.gene23960:CDS | 45.0% | |
AAGGGTCAAATGGTTCCCAT+TGG | + | chr1.3:49324127-49324146 | MS.gene23960:CDS | 45.0% | |
AAGTATCCACAGCATACAGG+TGG | + | chr1.3:49321436-49321455 | MS.gene23960:intron | 45.0% | |
AATGTGGCGTTCGATGTCTT+CGG | - | chr1.3:49318538-49318557 | None:intergenic | 45.0% | |
ACAGCAAGCAAAGTAGTCTG+GGG | - | chr1.3:49320485-49320504 | None:intergenic | 45.0% | |
ACTCCTGCGACAATGGAAAA+GGG | + | chr1.3:49320894-49320913 | MS.gene23960:CDS | 45.0% | |
AGACCTACTTGAAAGGGAAC+AGG | + | chr1.3:49322065-49322084 | MS.gene23960:CDS | 45.0% | |
AGCATCAGTTTGGTCAGTCA+AGG | + | chr1.3:49323899-49323918 | MS.gene23960:CDS | 45.0% | |
AGCCTGCGAAAAGGAATAGT+GGG | - | chr1.3:49319808-49319827 | None:intergenic | 45.0% | |
AGGAAATATTGGATGGAGGC+AGG | + | chr1.3:49321995-49322014 | MS.gene23960:CDS | 45.0% | |
AGGGCTCCTGAAAATTCATC+TGG | + | chr1.3:49323943-49323962 | MS.gene23960:CDS | 45.0% | |
AGGGTCAAATGGTTCCCATT+GGG | + | chr1.3:49324128-49324147 | MS.gene23960:CDS | 45.0% | |
AGTATCCACAGCATACAGGT+GGG | + | chr1.3:49321437-49321456 | MS.gene23960:intron | 45.0% | |
ATCACCCAGACCTACTTGAA+AGG | + | chr1.3:49322058-49322077 | MS.gene23960:CDS | 45.0% | |
ATCTGATGAATCGCCAAGCA+GGG | + | chr1.3:49323759-49323778 | MS.gene23960:CDS | 45.0% | |
ATGGAAATCCTGAACGCAGT+GGG | + | chr1.3:49322106-49322125 | MS.gene23960:CDS | 45.0% | |
ATGGCGAATTGGTCAGAAAC+GGG | + | chr1.3:49322812-49322831 | MS.gene23960:CDS | 45.0% | |
ATTGAAAGGCCGAGAGATGT+TGG | + | chr1.3:49318835-49318854 | MS.gene23960:CDS | 45.0% | |
ATTGAGATCCTAGGATGTCC+AGG | + | chr1.3:49321675-49321694 | MS.gene23960:intron | 45.0% | |
ATTGGATGGCATAGTGTGCT+AGG | + | chr1.3:49319463-49319482 | MS.gene23960:intron | 45.0% | |
CAAACCTCTAGACGACAATG+AGG | + | chr1.3:49319849-49319868 | MS.gene23960:CDS | 45.0% | |
CAAGAAAAAGCCATCAGTGC+CGG | + | chr1.3:49323871-49323890 | MS.gene23960:CDS | 45.0% | |
CACAACTAGCAAACTGGTCA+TGG | - | chr1.3:49322527-49322546 | None:intergenic | 45.0% | |
CACTGAGGTGGAGGAAATAT+TGG | + | chr1.3:49321984-49322003 | MS.gene23960:CDS | 45.0% | |
CAGTCGAAGGATTCCAATCA+GGG | - | chr1.3:49322413-49322432 | None:intergenic | 45.0% | |
CATACCTGCATATCAGTCGA+AGG | - | chr1.3:49322426-49322445 | None:intergenic | 45.0% | |
CATGGCGAATTGGTCAGAAA+CGG | + | chr1.3:49322811-49322830 | MS.gene23960:CDS | 45.0% | |
CCGAGACGCTTTCATGATTT+CGG | - | chr1.3:49323636-49323655 | None:intergenic | 45.0% | |
CCGGTAAATATGTCCACAAG+TGG | - | chr1.3:49322241-49322260 | None:intergenic | 45.0% | |
CGTGTCATGAGATCAGAATC+TGG | + | chr1.3:49321102-49321121 | MS.gene23960:CDS | 45.0% | |
CTACAGCAAGCAAAGTAGTC+TGG | - | chr1.3:49320487-49320506 | None:intergenic | 45.0% | |
CTCATTGTCGTCTAGAGGTT+TGG | - | chr1.3:49319851-49319870 | None:intergenic | 45.0% | |
CTTAACGTTTGGAAGGAGCA+GGG | + | chr1.3:49322153-49322172 | MS.gene23960:CDS | 45.0% | |
GAATCCTTCGACTGATATGC+AGG | + | chr1.3:49322419-49322438 | MS.gene23960:CDS | 45.0% | |
GAGGTGGAGGAAATATTGGA+TGG | + | chr1.3:49321988-49322007 | MS.gene23960:CDS | 45.0% | |
GATAGACAACTGGGTGAAAG+TGG | + | chr1.3:49319952-49319971 | MS.gene23960:CDS | 45.0% | |
GCAAATTCGGCTTCAAACAC+AGG | - | chr1.3:49321372-49321391 | None:intergenic | 45.0% | |
GCAGTTCCTATAAGAGTTGG+CGG | + | chr1.3:49321390-49321409 | MS.gene23960:CDS | 45.0% | |
GCCACCTTTCTGTTGGAAAA+AGG | - | chr1.3:49324004-49324023 | None:intergenic | 45.0% | |
GCCTTCAGCAATCCAGATTA+TGG | + | chr1.3:49322087-49322106 | MS.gene23960:CDS | 45.0% | |
GCTTACGATCCATCATACAC+TGG | + | chr1.3:49320441-49320460 | MS.gene23960:intron | 45.0% | |
GCTTTCAGAGTCTGTTCCAT+CGG | - | chr1.3:49321007-49321026 | None:intergenic | 45.0% | |
GGACATCCTAGGATCTCAAT+AGG | - | chr1.3:49321675-49321694 | None:intergenic | 45.0% | |
GGAGGCAGGAATTCACTTTA+TGG | + | chr1.3:49322009-49322028 | MS.gene23960:CDS | 45.0% | |
GGGCATCCATGATCAAATCA+TGG | - | chr1.3:49323528-49323547 | None:intergenic | 45.0% | |
GTCTCATCTTCTCCTCATCA+TGG | - | chr1.3:49323549-49323568 | None:intergenic | 45.0% | |
GTGGAGGAAATATTGGATGG+AGG | + | chr1.3:49321991-49322010 | MS.gene23960:CDS | 45.0% | |
TACAACTGCCACCTTTCTGT+TGG | - | chr1.3:49324011-49324030 | None:intergenic | 45.0% | |
TACGATCCATCATACACTGG+TGG | + | chr1.3:49320444-49320463 | MS.gene23960:intron | 45.0% | |
TATGGAAATCCTGAACGCAG+TGG | + | chr1.3:49322105-49322124 | MS.gene23960:CDS | 45.0% | |
TCACCACTTATGAGCAGCTA+AGG | + | chr1.3:49321133-49321152 | MS.gene23960:CDS | 45.0% | |
TCACCCAGACCTACTTGAAA+GGG | + | chr1.3:49322059-49322078 | MS.gene23960:CDS | 45.0% | |
TCAGTCGAAGGATTCCAATC+AGG | - | chr1.3:49322414-49322433 | None:intergenic | 45.0% | |
TCATCTTTCCTGGACATCCT+AGG | - | chr1.3:49321686-49321705 | None:intergenic | 45.0% | |
TCCAGACACAACTAGCAAAC+TGG | - | chr1.3:49322533-49322552 | None:intergenic | 45.0% | |
TCTTCCGAGGATAGACAACT+GGG | + | chr1.3:49319943-49319962 | MS.gene23960:CDS | 45.0% | |
TGAAGAACCCACAGCAGAAA+AGG | + | chr1.3:49322928-49322947 | MS.gene23960:CDS | 45.0% | |
TGCTGCCTGAGAAAATGATC+TGG | - | chr1.3:49319728-49319747 | None:intergenic | 45.0% | |
TGGCAGTCCTGATGGTATAT+CGG | + | chr1.3:49320092-49320111 | MS.gene23960:intron | 45.0% | |
TGGGGCACATCAAGAAAATC+AGG | + | chr1.3:49323064-49323083 | MS.gene23960:CDS | 45.0% | |
TTCACCCAGTTGTCTATCCT+CGG | - | chr1.3:49319950-49319969 | None:intergenic | 45.0% | |
TTCTTCCGAGGATAGACAAC+TGG | + | chr1.3:49319942-49319961 | MS.gene23960:CDS | 45.0% | |
TTGGACGAAGGGATTGATGA+GGG | + | chr1.3:49318889-49318908 | MS.gene23960:CDS | 45.0% | |
TTTGGACGAAGGGATTGATG+AGG | + | chr1.3:49318888-49318907 | MS.gene23960:CDS | 45.0% | |
! | AGCTGCCAGATCATTTTCTC+AGG | + | chr1.3:49319720-49319739 | MS.gene23960:CDS | 45.0% |
! | CTGGGTGCTTTGCATTTTAG+TGG | + | chr1.3:49320835-49320854 | MS.gene23960:CDS | 45.0% |
! | GAACAGGGGAAGATCTTTTG+AGG | - | chr1.3:49324073-49324092 | None:intergenic | 45.0% |
! | GGCAAAACACCCAATTTTCC+AGG | - | chr1.3:49321351-49321370 | None:intergenic | 45.0% |
! | GGTTGGTGTTCAATGGATGT+GGG | + | chr1.3:49320735-49320754 | MS.gene23960:CDS | 45.0% |
! | GTTCCCTTTCAAGTAGGTCT+GGG | - | chr1.3:49322065-49322084 | None:intergenic | 45.0% |
! | TGTTCCCTTTCAAGTAGGTC+TGG | - | chr1.3:49322066-49322085 | None:intergenic | 45.0% |
! | TTCATTTTCCCACTGCGTTC+AGG | - | chr1.3:49322117-49322136 | None:intergenic | 45.0% |
!! | ACCAGTTTGCTAGTTGTGTC+TGG | + | chr1.3:49322529-49322548 | MS.gene23960:intron | 45.0% |
!! | AGATGAATTTTCAGGAGCCC+TGG | - | chr1.3:49323944-49323963 | None:intergenic | 45.0% |
!! | AGGTTGGTGTTCAATGGATG+TGG | + | chr1.3:49320734-49320753 | MS.gene23960:CDS | 45.0% |
!! | ATTGGTGATGAGATGGGTCT+TGG | + | chr1.3:49320787-49320806 | MS.gene23960:CDS | 45.0% |
!! | CCGAAATCATGAAAGCGTCT+CGG | + | chr1.3:49323633-49323652 | MS.gene23960:CDS | 45.0% |
!! | CTTTAAGGCCCGAGATATGA+AGG | + | chr1.3:49322953-49322972 | MS.gene23960:CDS | 45.0% |
!! | GATGATGCAGTTGGTGATGA+TGG | + | chr1.3:49323128-49323147 | MS.gene23960:CDS | 45.0% |
!! | GGTTCTGAAGATGATGCAGT+TGG | + | chr1.3:49323119-49323138 | MS.gene23960:CDS | 45.0% |
!!! | AGCATTTTTGGCAAGCACTG+AGG | + | chr1.3:49321969-49321988 | MS.gene23960:CDS | 45.0% |
!!! | ATTTTTGGCAAGCACTGAGG+TGG | + | chr1.3:49321972-49321991 | MS.gene23960:CDS | 45.0% |
!! | AAAATAATATTCAAATTATT+TGG | - | chr1.3:49321800-49321819 | None:intergenic | 5.0% |
!! | TATATAATTTAAAAATGTAA+GGG | + | chr1.3:49320182-49320201 | MS.gene23960:intron | 5.0% |
!! | TTATATAATTTAAAAATGTA+AGG | + | chr1.3:49320181-49320200 | MS.gene23960:intron | 5.0% |
AACAACCAAAGTTGGGGGGT+TGG | + | chr1.3:49322347-49322366 | MS.gene23960:CDS | 50.0% | |
AACTTCCGCCGAACAGATGA+TGG | - | chr1.3:49323697-49323716 | None:intergenic | 50.0% | |
AAGAAGCGAGCTGAATCCGA+TGG | + | chr1.3:49320988-49321007 | MS.gene23960:CDS | 50.0% | |
ACAACCAAAGTTGGGGGGTT+GGG | + | chr1.3:49322348-49322367 | MS.gene23960:CDS | 50.0% | |
ACACGATTCTGCTCAGGATC+TGG | + | chr1.3:49320957-49320976 | MS.gene23960:CDS | 50.0% | |
ACCAAACTGATGCTCAAGCC+CGG | - | chr1.3:49323893-49323912 | None:intergenic | 50.0% | |
ACCTCTAGACGACAATGAGG+GGG | + | chr1.3:49319852-49319871 | MS.gene23960:CDS | 50.0% | |
ACCTGCGAAGCGGTTTAAGA+CGG | + | chr1.3:49319119-49319138 | MS.gene23960:CDS | 50.0% | |
ACCTTCTCCATCAGTGACAG+AGG | - | chr1.3:49320419-49320438 | None:intergenic | 50.0% | |
ATCCTCGGAAGAAACACGCT+TGG | - | chr1.3:49319935-49319954 | None:intergenic | 50.0% | |
ATGTGGCGTTCGATGTCTTC+GGG | - | chr1.3:49318537-49318556 | None:intergenic | 50.0% | |
CACTCCTGCGACAATGGAAA+AGG | + | chr1.3:49320893-49320912 | MS.gene23960:CDS | 50.0% | |
CAGCAAGCAAAGTAGTCTGG+GGG | - | chr1.3:49320484-49320503 | None:intergenic | 50.0% | |
CATCTGATGAATCGCCAAGC+AGG | + | chr1.3:49323758-49323777 | MS.gene23960:CDS | 50.0% | |
CCTTCTCCATCAGTGACAGA+GGG | - | chr1.3:49320418-49320437 | None:intergenic | 50.0% | |
CTGGTGCACCATCATCTGTT+CGG | + | chr1.3:49323686-49323705 | MS.gene23960:CDS | 50.0% | |
CTGTCACTGATGGAGAAGGT+TGG | + | chr1.3:49320419-49320438 | MS.gene23960:intron | 50.0% | |
CTGTTACACTCCTGCGACAA+TGG | + | chr1.3:49320887-49320906 | MS.gene23960:CDS | 50.0% | |
GAACTGCCACCAGTGTATGA+TGG | - | chr1.3:49320453-49320472 | None:intergenic | 50.0% | |
GAGCCTGCGAAAAGGAATAG+TGG | - | chr1.3:49319809-49319828 | None:intergenic | 50.0% | |
GAGTGAGACCATCCATTCTC+CGG | - | chr1.3:49322260-49322279 | None:intergenic | 50.0% | |
GATCATGGATGCCCATGATG+AGG | + | chr1.3:49323534-49323553 | MS.gene23960:CDS | 50.0% | |
GCTTAACGTTTGGAAGGAGC+AGG | + | chr1.3:49322152-49322171 | MS.gene23960:CDS | 50.0% | |
GGGTTGGGGACAAATCTTAC+TGG | + | chr1.3:49322363-49322382 | MS.gene23960:CDS | 50.0% | |
GGTTTCTTGAGCCTGCGAAA+AGG | - | chr1.3:49319817-49319836 | None:intergenic | 50.0% | |
TCAAGCTTCGGTACCTCTTC+AGG | - | chr1.3:49319781-49319800 | None:intergenic | 50.0% | |
TCACGCAGAGGATCTTCAAG+AGG | + | chr1.3:49323155-49323174 | MS.gene23960:CDS | 50.0% | |
TCATCTGTTCGGCGGAAGTT+TGG | + | chr1.3:49323697-49323716 | MS.gene23960:CDS | 50.0% | |
TCTGATGAATCGCCAAGCAG+GGG | + | chr1.3:49323760-49323779 | MS.gene23960:CDS | 50.0% | |
TCTGGCAGCTCTTTCAACAC+TGG | - | chr1.3:49319710-49319729 | None:intergenic | 50.0% | |
TGCAGCTCTTTGTGCAACCT+TGG | - | chr1.3:49323587-49323606 | None:intergenic | 50.0% | |
TTCTTGCTGCCGATAGGTTG+AGG | + | chr1.3:49318935-49318954 | MS.gene23960:CDS | 50.0% | |
! | AAAGCGTCTCGGTTCCTACA+TGG | + | chr1.3:49323644-49323663 | MS.gene23960:CDS | 50.0% |
! | AGGCCTGTTCCCTTTCAAGT+AGG | - | chr1.3:49322071-49322090 | None:intergenic | 50.0% |
! | AGTCTGGCTTCAGAACCCAA+TGG | - | chr1.3:49324146-49324165 | None:intergenic | 50.0% |
! | CATTGTCGCAGGAGTGTAAC+AGG | - | chr1.3:49320889-49320908 | None:intergenic | 50.0% |
! | CGAACGCCACATTTTCGATG+AGG | + | chr1.3:49318545-49318564 | MS.gene23960:CDS | 50.0% |
! | CTTCCCTTTTCCATTGTCGC+AGG | - | chr1.3:49320900-49320919 | None:intergenic | 50.0% |
! | GATGATGGCAAATCACGCAG+AGG | + | chr1.3:49323143-49323162 | MS.gene23960:CDS | 50.0% |
! | GATTGATGAGGGTGGTGGTT+CGG | + | chr1.3:49318900-49318919 | MS.gene23960:CDS | 50.0% |
! | GTCTGGCTTCAGAACCCAAT+GGG | - | chr1.3:49324145-49324164 | None:intergenic | 50.0% |
! | TATAGGCTAGAGAGCGTGCA+TGG | + | chr1.3:49322793-49322812 | MS.gene23960:intron | 50.0% |
! | TGGGGGAAGAGAGTATGGAA+GGG | + | chr1.3:49322616-49322635 | MS.gene23960:intron | 50.0% |
! | TGTTGTTTACAGGTGTGCGG+TGG | + | chr1.3:49321819-49321838 | MS.gene23960:intron | 50.0% |
!! | ATAGTGGGCGCATCAAGCTT+CGG | - | chr1.3:49319793-49319812 | None:intergenic | 50.0% |
AAAAAGAAGCGACCTGGGCC+TGG | + | chr1.3:49319898-49319917 | MS.gene23960:CDS | 55.0% | |
AACCGGTGTGTGTGTGTGTG+TGG | + | chr1.3:49322587-49322606 | MS.gene23960:intron | 55.0% | |
ACCGTCTTAAACCGCTTCGC+AGG | - | chr1.3:49319123-49319142 | None:intergenic | 55.0% | |
ACTCGACGAGGAAGCTTCCA+AGG | + | chr1.3:49323567-49323586 | MS.gene23960:CDS | 55.0% | |
AGCAAAGTAGTCTGGGGGAG+TGG | - | chr1.3:49320479-49320498 | None:intergenic | 55.0% | |
AGCGTGTTCTTGCTGCCGAT+AGG | + | chr1.3:49318929-49318948 | MS.gene23960:CDS | 55.0% | |
ATTGGCCCACCTGTATGCTG+TGG | - | chr1.3:49321445-49321464 | None:intergenic | 55.0% | |
CAACCAAAGTTGGGGGGTTG+GGG | + | chr1.3:49322349-49322368 | MS.gene23960:CDS | 55.0% | |
CAAGCTGCTTAGGCCTGAAG+AGG | + | chr1.3:49319765-49319784 | MS.gene23960:CDS | 55.0% | |
CACCACACACACACACACAC+CGG | - | chr1.3:49322592-49322611 | None:intergenic | 55.0% | |
CCCTCTGTCACTGATGGAGA+AGG | + | chr1.3:49320415-49320434 | MS.gene23960:intron | 55.0% | |
CCTACATGGACAGGAAGGTC+AGG | + | chr1.3:49323658-49323677 | MS.gene23960:CDS | 55.0% | |
CCTGACCTTCCTGTCCATGT+AGG | - | chr1.3:49323661-49323680 | None:intergenic | 55.0% | |
CGCTTGGTCCATTTCCTACC+AGG | - | chr1.3:49319919-49319938 | None:intergenic | 55.0% | |
CGGTTCCTACATGGACAGGA+AGG | + | chr1.3:49323653-49323672 | MS.gene23960:CDS | 55.0% | |
CTCTTCAGGCCTAAGCAGCT+TGG | - | chr1.3:49319767-49319786 | None:intergenic | 55.0% | |
GAAGGGATTGATGAGGGTGG+TGG | + | chr1.3:49318895-49318914 | MS.gene23960:CDS | 55.0% | |
GACCAAGCGTGTTTCTTCCG+AGG | + | chr1.3:49319930-49319949 | MS.gene23960:CDS | 55.0% | |
GACGAAGGGATTGATGAGGG+TGG | + | chr1.3:49318892-49318911 | MS.gene23960:CDS | 55.0% | |
GAGTTGCACTGCCAAAGAGC+TGG | + | chr1.3:49320757-49320776 | MS.gene23960:CDS | 55.0% | |
GCCTAAGCAGCTTGGAGGTT+GGG | - | chr1.3:49319759-49319778 | None:intergenic | 55.0% | |
GCGTTCGATGTCTTCGGGAT+TGG | - | chr1.3:49318532-49318551 | None:intergenic | 55.0% | |
GCTAGGGTAACTTCGGCGTT+TGG | - | chr1.3:49321231-49321250 | None:intergenic | 55.0% | |
GGAGAAGATGAGACTCGACG+AGG | + | chr1.3:49323555-49323574 | MS.gene23960:CDS | 55.0% | |
GGTGTGTGTGTGTGTGTGGT+GGG | + | chr1.3:49322591-49322610 | MS.gene23960:intron | 55.0% | |
GTCTCGGTTCCTACATGGAC+AGG | + | chr1.3:49323649-49323668 | MS.gene23960:CDS | 55.0% | |
GTGCACCATCATCTGTTCGG+CGG | + | chr1.3:49323689-49323708 | MS.gene23960:CDS | 55.0% | |
GTGTGTGTGTGTGTGTGGTG+GGG | + | chr1.3:49322592-49322611 | MS.gene23960:intron | 55.0% | |
TATGCTGCTGGGGCTTCTTC+TGG | + | chr1.3:49323802-49323821 | MS.gene23960:CDS | 55.0% | |
TCCCCCTCATTGTCGTCTAG+AGG | - | chr1.3:49319856-49319875 | None:intergenic | 55.0% | |
TGCTGGGGCTTCTTCTGGTA+AGG | + | chr1.3:49323807-49323826 | MS.gene23960:CDS | 55.0% | |
TGTGTGTGTGTGTGTGGTGG+GGG | + | chr1.3:49322593-49322612 | MS.gene23960:intron | 55.0% | |
TTAGCGCCCTCTGTCACTGA+TGG | + | chr1.3:49320409-49320428 | MS.gene23960:intron | 55.0% | |
TTCAGGCCTAAGCAGCTTGG+AGG | - | chr1.3:49319764-49319783 | None:intergenic | 55.0% | |
TTGCACTGCCAAAGAGCTGG+TGG | + | chr1.3:49320760-49320779 | MS.gene23960:CDS | 55.0% | |
! | AGAGAGCGTGCATGGCGAAT+TGG | + | chr1.3:49322801-49322820 | MS.gene23960:CDS | 55.0% |
! | AGAGAGTATGGAAGGGGGCA+TGG | + | chr1.3:49322623-49322642 | MS.gene23960:intron | 55.0% |
! | ATGGAAGGGGGCATGGACAA+TGG | + | chr1.3:49322630-49322649 | MS.gene23960:intron | 55.0% |
! | CACGTGGGTGACTCTAGAAG+TGG | - | chr1.3:49319357-49319376 | None:intergenic | 55.0% |
! | CGCCCACTATTCCTTTTCGC+AGG | + | chr1.3:49319803-49319822 | MS.gene23960:CDS | 55.0% |
! | GGGGAAGAGAGTATGGAAGG+GGG | + | chr1.3:49322618-49322637 | MS.gene23960:intron | 55.0% |
! | GGGGGAAGAGAGTATGGAAG+GGG | + | chr1.3:49322617-49322636 | MS.gene23960:intron | 55.0% |
! | GTGGGGGAAGAGAGTATGGA+AGG | + | chr1.3:49322615-49322634 | MS.gene23960:intron | 55.0% |
! | TCTAGAGTCACCCACGTGGT+TGG | + | chr1.3:49319359-49319378 | MS.gene23960:intron | 55.0% |
!! | CACTTCTAGAGTCACCCACG+TGG | + | chr1.3:49319355-49319374 | MS.gene23960:intron | 55.0% |
!! | TTTGGCAAGCACTGAGGTGG+AGG | + | chr1.3:49321975-49321994 | MS.gene23960:CDS | 55.0% |
ACAGGAAGGTCAGGAGCTGC+TGG | + | chr1.3:49323667-49323686 | MS.gene23960:CDS | 60.0% | |
CGGTGTGTGTGTGTGTGTGG+TGG | + | chr1.3:49322590-49322609 | MS.gene23960:intron | 60.0% | |
GACCTGGGCCTGGTAGGAAA+TGG | + | chr1.3:49319908-49319927 | MS.gene23960:CDS | 60.0% | |
GCCCAACCTCCAAGCTGCTT+AGG | + | chr1.3:49319755-49319774 | MS.gene23960:CDS | 60.0% | |
GCCGGGCTTGAGCATCAGTT+TGG | + | chr1.3:49323889-49323908 | MS.gene23960:CDS | 60.0% | |
GGCCTAAGCAGCTTGGAGGT+TGG | - | chr1.3:49319760-49319779 | None:intergenic | 60.0% | |
GTCCATTTCCTACCAGGCCC+AGG | - | chr1.3:49319913-49319932 | None:intergenic | 60.0% | |
GTTCTCGATGCAGCCTCTGC+TGG | + | chr1.3:49319174-49319193 | MS.gene23960:CDS | 60.0% | |
TGTCCCCAACCCCCCAACTT+TGG | - | chr1.3:49322355-49322374 | None:intergenic | 60.0% | |
! | ATGCTCAAGCCCGGCACTGA+TGG | - | chr1.3:49323884-49323903 | None:intergenic | 60.0% |
! | TGTGTGTGTGTGGTGGGGGT+GGG | + | chr1.3:49322597-49322616 | MS.gene23960:intron | 60.0% |
AGAAGCGACCTGGGCCTGGT+AGG | + | chr1.3:49319902-49319921 | MS.gene23960:CDS | 65.0% | |
GGGGGTGGGGGAAGAGAGTA+TGG | + | chr1.3:49322611-49322630 | MS.gene23960:intron | 65.0% | |
! | GTGTGTGTGTGGTGGGGGTG+GGG | + | chr1.3:49322598-49322617 | MS.gene23960:intron | 65.0% |
! | GTGTGTGTGTGTGGTGGGGG+TGG | + | chr1.3:49322596-49322615 | MS.gene23960:intron | 65.0% |
! | TGTGTGTGTGGTGGGGGTGG+GGG | + | chr1.3:49322599-49322618 | MS.gene23960:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 49318477 | 49324176 | 49318477 | ID=MS.gene23960 |
chr1.3 | mRNA | 49318477 | 49324176 | 49318477 | ID=MS.gene23960.t1;Parent=MS.gene23960 |
chr1.3 | exon | 49318477 | 49318566 | 49318477 | ID=MS.gene23960.t1.exon1;Parent=MS.gene23960.t1 |
chr1.3 | CDS | 49318477 | 49318566 | 49318477 | ID=cds.MS.gene23960.t1;Parent=MS.gene23960.t1 |
chr1.3 | exon | 49318673 | 49319209 | 49318673 | ID=MS.gene23960.t1.exon2;Parent=MS.gene23960.t1 |
chr1.3 | CDS | 49318673 | 49319209 | 49318673 | ID=cds.MS.gene23960.t1;Parent=MS.gene23960.t1 |
chr1.3 | exon | 49319568 | 49319973 | 49319568 | ID=MS.gene23960.t1.exon3;Parent=MS.gene23960.t1 |
chr1.3 | CDS | 49319568 | 49319973 | 49319568 | ID=cds.MS.gene23960.t1;Parent=MS.gene23960.t1 |
chr1.3 | exon | 49320581 | 49321454 | 49320581 | ID=MS.gene23960.t1.exon4;Parent=MS.gene23960.t1 |
chr1.3 | CDS | 49320581 | 49321454 | 49320581 | ID=cds.MS.gene23960.t1;Parent=MS.gene23960.t1 |
chr1.3 | exon | 49321831 | 49322440 | 49321831 | ID=MS.gene23960.t1.exon5;Parent=MS.gene23960.t1 |
chr1.3 | CDS | 49321831 | 49322440 | 49321831 | ID=cds.MS.gene23960.t1;Parent=MS.gene23960.t1 |
chr1.3 | exon | 49322798 | 49323265 | 49322798 | ID=MS.gene23960.t1.exon6;Parent=MS.gene23960.t1 |
chr1.3 | CDS | 49322798 | 49323265 | 49322798 | ID=cds.MS.gene23960.t1;Parent=MS.gene23960.t1 |
chr1.3 | exon | 49323514 | 49324176 | 49323514 | ID=MS.gene23960.t1.exon7;Parent=MS.gene23960.t1 |
chr1.3 | CDS | 49323514 | 49324176 | 49323514 | ID=cds.MS.gene23960.t1;Parent=MS.gene23960.t1 |
Gene Sequence |
Protein sequence |