AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011242

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011242.t1 MTR_8g018400 98.789 413 5 0 1 413 1 413 0.0 842
MS.gene011242.t1 MTR_2g099620 94.189 413 24 0 1 413 1 413 0.0 808
MS.gene011242.t1 MTR_2g039960 92.978 413 29 0 1 413 1 413 0.0 798
MS.gene011242.t1 MTR_4g125970 91.283 413 36 0 1 413 1 413 0.0 783
MS.gene011242.t1 MTR_4g125970 91.283 413 36 0 1 413 18 430 0.0 783
MS.gene011242.t1 MTR_2g099620 94.656 393 21 0 21 413 5 397 0.0 769
MS.gene011242.t1 MTR_2g438110 64.343 373 133 0 41 413 34 406 0.0 511
MS.gene011242.t1 MTR_1g046570 61.929 394 113 5 56 413 6 398 2.08e-165 470
MS.gene011242.t1 MTR_8g018370 65.896 346 91 4 71 413 3 324 8.70e-153 435
MS.gene011242.t1 MTR_7g076820 41.033 368 213 4 40 406 149 513 2.85e-87 275
MS.gene011242.t1 MTR_7g076830 40.489 368 215 4 40 406 142 506 8.93e-86 271
MS.gene011242.t1 MTR_7g076800 40.489 368 215 4 40 406 140 504 9.04e-86 270
MS.gene011242.t1 MTR_3g107420 39.946 368 215 6 47 409 53 419 9.96e-76 242
MS.gene011242.t1 MTR_1g012420 39.130 368 218 6 47 409 53 419 1.01e-75 242
MS.gene011242.t1 MTR_4g010565 39.130 368 218 6 47 409 130 496 2.13e-73 238
MS.gene011242.t1 MTR_3g467550 35.467 375 220 5 40 396 116 486 4.55e-67 223
MS.gene011242.t1 MTR_8g018350 65.089 169 45 5 252 413 15 176 6.14e-66 208
MS.gene011242.t1 MTR_3g467550 35.326 368 216 5 47 396 92 455 4.02e-65 217
MS.gene011242.t1 MTR_1g061970 34.925 398 221 12 41 405 80 472 4.50e-63 211
MS.gene011242.t1 MTR_2g100230 34.890 364 223 3 41 394 96 455 1.01e-62 210
MS.gene011242.t1 MTR_4g049910 33.766 385 227 9 41 405 55 431 1.99e-61 205
MS.gene011242.t1 MTR_3g449250 34.324 370 232 5 45 406 94 460 2.32e-60 205
MS.gene011242.t1 MTR_4g134170 31.529 425 250 7 10 397 247 667 2.83e-60 208
MS.gene011242.t1 MTR_3g449250 34.324 370 232 5 45 406 94 460 4.18e-60 205
MS.gene011242.t1 MTR_8g018330 58.929 168 58 4 252 413 15 177 1.27e-59 192
MS.gene011242.t1 MTR_7g109720 33.795 361 232 4 41 394 232 592 3.26e-59 206
MS.gene011242.t1 MTR_0915s0010 39.437 284 168 4 54 336 2 282 4.27e-59 194
MS.gene011242.t1 MTR_5g090120 34.043 376 235 6 45 411 85 456 4.97e-59 202
MS.gene011242.t1 MTR_6g005320 31.981 419 245 8 15 397 213 627 8.60e-58 200
MS.gene011242.t1 MTR_3g083690 33.077 390 238 6 40 407 144 532 1.09e-57 199
MS.gene011242.t1 MTR_6g082080 32.884 371 245 3 41 408 10 379 1.30e-57 195
MS.gene011242.t1 MTR_7g056830 32.884 371 245 3 41 408 10 379 3.60e-57 194
MS.gene011242.t1 MTR_4g105100 33.884 363 234 3 41 397 202 564 8.44e-57 197
MS.gene011242.t1 MTR_4g114120 33.163 392 233 6 42 407 141 529 7.27e-56 195
MS.gene011242.t1 MTR_4g079320 32.440 373 242 5 42 407 20 389 1.13e-55 196
MS.gene011242.t1 MTR_3g467550 34.821 336 197 5 40 357 116 447 4.84e-55 189
MS.gene011242.t1 MTR_1g054630 32.405 395 233 8 40 407 153 540 9.05e-54 189
MS.gene011242.t1 MTR_2g066050 33.611 360 234 2 41 395 53 412 1.45e-53 186
MS.gene011242.t1 MTR_2g007000 33.333 384 240 6 41 412 504 883 3.81e-53 191
MS.gene011242.t1 MTR_1g026830 30.077 389 253 8 41 413 147 532 7.21e-53 186
MS.gene011242.t1 MTR_1g095810 30.077 389 253 8 41 413 145 530 4.00e-52 184
MS.gene011242.t1 MTR_2g032630 32.873 362 236 4 41 396 496 856 8.49e-52 187
MS.gene011242.t1 MTR_6g005550 31.053 380 251 5 41 412 165 541 1.74e-50 181
MS.gene011242.t1 MTR_3g049990 32.902 386 240 7 25 396 133 513 1.90e-50 181
MS.gene011242.t1 MTR_5g027840 33.333 369 228 6 28 384 95 457 8.78e-50 176
MS.gene011242.t1 MTR_6g033070 31.593 364 237 6 41 394 140 501 4.55e-48 172
MS.gene011242.t1 MTR_2g041140 32.115 383 244 7 27 396 124 503 2.20e-46 170
MS.gene011242.t1 MTR_2g055850 30.707 368 232 12 40 391 90 450 3.04e-40 150
MS.gene011242.t1 MTR_6g056080 30.199 351 218 6 45 380 115 453 3.59e-40 152
MS.gene011242.t1 MTR_4g112340 30.267 337 216 8 50 372 106 437 1.41e-39 149
MS.gene011242.t1 MTR_3g071620 28.571 364 232 7 47 383 22 384 3.61e-39 148
MS.gene011242.t1 MTR_2g063080 25.708 424 250 7 41 402 109 529 4.52e-39 147
MS.gene011242.t1 MTR_7g100820 27.487 382 268 5 34 412 130 505 8.74e-39 147
MS.gene011242.t1 MTR_4g105100 32.039 309 204 3 41 343 202 510 1.36e-38 145
MS.gene011242.t1 MTR_7g057250 26.637 443 235 10 39 399 161 595 1.26e-37 145
MS.gene011242.t1 MTR_1g102410 28.219 365 227 5 47 380 50 410 4.02e-37 143
MS.gene011242.t1 MTR_8g027780 27.919 394 237 11 42 406 107 482 1.06e-36 141
MS.gene011242.t1 MTR_8g027770 27.665 394 238 9 42 406 202 577 1.17e-35 139
MS.gene011242.t1 MTR_1g083130 26.650 409 245 8 41 397 26 431 1.52e-35 138
MS.gene011242.t1 MTR_8g027775 28.238 386 246 10 42 406 103 478 2.23e-35 137
MS.gene011242.t1 MTR_8g097000 27.532 385 255 9 42 406 289 669 5.68e-34 134
MS.gene011242.t1 MTR_4g068990 29.446 343 221 11 68 395 102 438 7.69e-34 134
MS.gene011242.t1 MTR_3g107420 41.146 192 110 3 47 235 53 244 4.69e-32 124
MS.gene011242.t1 MTR_5g092560 28.261 368 239 11 68 413 102 466 6.76e-32 128
MS.gene011242.t1 MTR_6g039840 28.010 382 243 10 41 396 110 485 1.68e-31 127
MS.gene011242.t1 MTR_4g112320 30.000 260 172 6 117 372 2 255 2.81e-29 118
MS.gene011242.t1 MTR_8g027780 27.353 340 208 10 42 352 107 436 1.30e-26 111
MS.gene011242.t1 MTR_5g069330 26.221 389 267 7 36 413 2 381 6.02e-26 108
MS.gene011242.t1 MTR_5g069330 26.302 384 263 7 41 413 3 377 8.25e-26 108
MS.gene011242.t1 MTR_4g131750 25.964 389 241 12 49 399 90 469 1.87e-24 105
MS.gene011242.t1 MTR_0427s0010 31.602 231 108 8 198 405 3 206 7.18e-24 99.4
MS.gene011242.t1 MTR_3g118120 26.434 401 241 13 24 383 120 507 1.08e-23 103
MS.gene011242.t1 MTR_4g077370 37.634 186 113 1 41 223 250 435 3.61e-23 101
MS.gene011242.t1 MTR_4g077370 35.079 191 96 4 41 223 2 172 3.65e-17 83.6
MS.gene011242.t1 MTR_6g039840 28.289 304 195 8 110 396 12 309 4.38e-23 101
MS.gene011242.t1 MTR_4g068990 30.357 224 143 6 181 395 8 227 3.22e-21 96.3
MS.gene011242.t1 MTR_5g077690 23.238 383 215 6 79 389 71 446 8.19e-21 94.7
MS.gene011242.t1 MTR_5g092560 29.954 217 144 5 181 390 8 223 1.21e-19 91.3
MS.gene011242.t1 MTR_4g459350 31.183 186 118 5 41 217 41 225 2.67e-18 84.7
MS.gene011242.t1 MTR_8g032230 37.681 138 79 2 41 174 10 144 2.67e-18 82.4
MS.gene011242.t1 MTR_4g059460 31.183 186 118 5 41 217 44 228 1.79e-17 85.1
MS.gene011242.t1 MTR_4g059460 36.082 97 61 1 310 406 392 487 1.10e-13 73.2
MS.gene011242.t1 MTR_2g043360 30.645 186 119 5 41 217 41 225 4.84e-17 83.6
MS.gene011242.t1 MTR_2g043360 36.082 97 61 1 310 406 389 484 2.29e-14 75.5
MS.gene011242.t1 MTR_8g042690 22.111 398 284 11 24 404 1 389 1.38e-16 81.6
MS.gene011242.t1 MTR_2g043360 36.082 97 61 1 310 406 271 366 2.52e-14 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011242.t1 AT1G54270 91.304 414 33 2 1 413 1 412 0.0 780
MS.gene011242.t1 AT3G13920 91.063 414 34 2 1 413 1 412 0.0 778
MS.gene011242.t1 AT1G54270 90.097 414 33 3 1 413 1 407 0.0 763
MS.gene011242.t1 AT1G72730 87.681 414 50 1 1 413 1 414 0.0 761
MS.gene011242.t1 AT3G13920 89.855 414 34 3 1 413 1 407 0.0 760
MS.gene011242.t1 AT3G13920 93.041 388 26 1 27 413 15 402 0.0 747
MS.gene011242.t1 AT3G13920 91.094 393 32 2 1 392 1 391 0.0 736
MS.gene011242.t1 AT3G13920 91.094 393 32 2 1 392 5 395 0.0 735
MS.gene011242.t1 AT3G19760 62.468 389 139 1 25 413 27 408 3.27e-179 505
MS.gene011242.t1 AT1G51380 58.266 369 154 0 41 409 23 391 1.59e-161 460
MS.gene011242.t1 AT1G51380 58.333 252 105 0 41 292 23 274 1.77e-107 318
MS.gene011242.t1 AT3G61240 38.575 407 243 6 6 409 89 491 5.65e-88 276
MS.gene011242.t1 AT3G61240 38.575 407 243 6 6 409 89 491 5.65e-88 276
MS.gene011242.t1 AT4G00660 39.623 371 220 4 40 409 131 498 5.52e-87 273
MS.gene011242.t1 AT4G00660 39.623 371 220 4 40 409 131 498 5.52e-87 273
MS.gene011242.t1 AT2G45810 39.241 395 223 7 14 407 141 519 6.32e-86 271
MS.gene011242.t1 AT1G51380 55.924 211 93 0 41 251 23 233 4.06e-82 254
MS.gene011242.t1 AT1G51380 55.924 211 93 0 41 251 23 233 6.56e-82 254
MS.gene011242.t1 AT5G11170 37.949 390 235 7 26 409 31 419 5.25e-75 240
MS.gene011242.t1 AT5G11200 37.949 390 235 7 26 409 31 419 5.25e-75 240
MS.gene011242.t1 AT3G53110 35.250 400 231 11 33 407 81 477 1.08e-67 223
MS.gene011242.t1 AT5G11170 38.872 337 200 6 78 409 1 336 1.38e-67 218
MS.gene011242.t1 AT5G11200 34.339 431 235 8 26 409 31 460 1.12e-66 219
MS.gene011242.t1 AT5G26742 35.000 420 244 10 9 413 80 485 1.46e-64 220
MS.gene011242.t1 AT5G26742 35.000 420 244 10 9 413 80 485 1.48e-64 220
MS.gene011242.t1 AT1G55150 34.167 360 231 2 41 394 100 459 3.83e-63 211
MS.gene011242.t1 AT1G55150 34.167 360 231 2 41 394 125 484 5.13e-63 211
MS.gene011242.t1 AT3G22310 34.946 372 229 6 45 407 121 488 2.44e-62 211
MS.gene011242.t1 AT5G63120 34.646 381 237 3 42 413 167 544 3.00e-62 211
MS.gene011242.t1 AT3G22310 34.946 372 229 6 45 407 121 488 3.22e-62 211
MS.gene011242.t1 AT5G26742 37.151 358 205 9 71 413 40 392 4.04e-62 212
MS.gene011242.t1 AT2G33730 32.388 423 249 7 10 397 274 694 1.00e-61 212
MS.gene011242.t1 AT3G22330 34.677 372 230 6 45 407 109 476 1.25e-61 210
MS.gene011242.t1 AT1G77030 31.989 372 245 4 42 407 30 399 4.06e-59 206
MS.gene011242.t1 AT2G47330 33.681 383 239 6 41 412 229 607 1.01e-57 202
MS.gene011242.t1 AT3G58570 33.249 397 242 7 33 406 136 532 5.95e-57 198
MS.gene011242.t1 AT3G58510 32.902 386 239 6 40 406 151 535 1.07e-56 196
MS.gene011242.t1 AT3G58510 32.902 386 239 6 40 406 151 535 1.07e-56 196
MS.gene011242.t1 AT3G58510 32.902 386 239 6 40 406 151 535 1.07e-56 196
MS.gene011242.t1 AT5G60990 32.242 397 243 7 36 413 5 394 3.72e-56 192
MS.gene011242.t1 AT1G20920 33.511 376 240 5 46 412 197 571 4.55e-56 198
MS.gene011242.t1 AT5G14610 32.546 381 244 6 41 412 162 538 6.20e-56 195
MS.gene011242.t1 AT5G14610 32.546 381 244 6 41 412 162 538 7.05e-56 195
MS.gene011242.t1 AT5G14610 32.546 381 244 6 41 412 170 546 8.00e-56 195
MS.gene011242.t1 AT2G42520 33.750 400 235 9 33 404 149 546 2.29e-55 193
MS.gene011242.t1 AT2G42520 33.750 400 235 9 33 404 149 546 2.29e-55 193
MS.gene011242.t1 AT2G42520 33.750 400 235 9 33 404 149 546 2.29e-55 193
MS.gene011242.t1 AT3G01540 34.293 382 236 10 41 412 159 535 3.90e-55 192
MS.gene011242.t1 AT3G06480 33.938 386 236 6 39 412 434 812 3.90e-55 197
MS.gene011242.t1 AT3G01540 34.293 382 236 10 41 412 159 535 4.62e-55 192
MS.gene011242.t1 AT3G01540 34.293 382 236 10 41 412 159 535 4.62e-55 192
MS.gene011242.t1 AT3G01540 34.293 382 236 10 41 412 159 535 4.62e-55 192
MS.gene011242.t1 AT1G20920 33.773 379 235 6 46 412 535 909 1.58e-54 195
MS.gene011242.t1 AT1G20920 33.773 379 235 6 46 412 535 909 1.58e-54 195
MS.gene011242.t1 AT1G20920 33.773 379 235 6 46 412 535 909 1.58e-54 195
MS.gene011242.t1 AT1G20920 33.773 379 235 6 46 412 535 909 1.58e-54 195
MS.gene011242.t1 AT1G20920 33.773 379 235 6 46 412 535 909 1.58e-54 195
MS.gene011242.t1 AT1G20920 33.773 379 235 6 46 412 535 909 1.58e-54 195
MS.gene011242.t1 AT1G16280 32.368 380 241 5 30 396 43 419 7.77e-53 184
MS.gene011242.t1 AT4G16630 33.156 377 243 4 29 396 153 529 1.33e-52 188
MS.gene011242.t1 AT3G02065 32.329 365 234 5 41 394 111 473 6.95e-52 181
MS.gene011242.t1 AT3G02065 32.329 365 234 5 41 394 111 473 6.95e-52 181
MS.gene011242.t1 AT5G14610 31.608 367 238 6 55 412 45 407 8.33e-52 181
MS.gene011242.t1 AT5G14610 31.608 367 238 6 55 412 45 407 8.33e-52 181
MS.gene011242.t1 AT5G11200 30.958 449 244 10 26 409 31 478 4.41e-51 179
MS.gene011242.t1 AT4G33370 30.412 388 251 8 41 412 98 482 5.45e-51 180
MS.gene011242.t1 AT5G14610 31.707 369 239 6 53 412 242 606 1.04e-50 182
MS.gene011242.t1 AT5G51280 30.691 391 246 8 41 412 147 531 1.60e-50 179
MS.gene011242.t1 AT1G31970 33.053 357 224 5 41 384 117 471 1.99e-49 176
MS.gene011242.t1 AT1G28180 32.402 358 219 6 63 410 5 349 2.42e-49 171
MS.gene011242.t1 AT3G02065 32.827 329 208 5 77 394 10 336 7.72e-47 165
MS.gene011242.t1 AT3G09620 32.181 376 210 8 46 409 403 745 1.25e-46 172
MS.gene011242.t1 AT3G09620 32.181 376 210 8 46 409 402 744 1.28e-46 172
MS.gene011242.t1 AT3G18600 31.117 376 249 6 41 408 90 463 1.90e-46 168
MS.gene011242.t1 AT1G12770 27.431 401 229 6 41 381 111 509 1.56e-45 165
MS.gene011242.t1 AT1G12770 27.431 401 229 6 41 381 111 509 1.56e-45 165
MS.gene011242.t1 AT3G09720 29.459 370 255 4 46 412 147 513 6.19e-45 163
MS.gene011242.t1 AT3G09720 29.459 370 255 4 46 412 147 513 6.19e-45 163
MS.gene011242.t1 AT5G63120 34.084 311 193 3 42 343 167 474 8.75e-43 156
MS.gene011242.t1 AT5G63120 34.084 311 193 3 42 343 167 474 8.75e-43 156
MS.gene011242.t1 AT5G63120 34.084 311 193 3 42 343 167 474 8.75e-43 156
MS.gene011242.t1 AT5G65900 30.084 359 243 5 41 391 155 513 1.11e-42 159
MS.gene011242.t1 AT5G63120 34.084 311 193 3 42 343 167 474 1.15e-42 156
MS.gene011242.t1 AT5G62190 31.383 376 230 9 55 411 111 477 2.20e-42 158
MS.gene011242.t1 AT5G05450 29.917 361 228 7 47 383 23 382 8.92e-42 155
MS.gene011242.t1 AT1G71370 30.114 352 230 7 47 383 23 373 2.80e-41 154
MS.gene011242.t1 AT5G14610 31.024 332 216 6 41 363 170 497 1.11e-39 148
MS.gene011242.t1 AT3G06480 32.209 326 202 6 39 352 434 752 3.16e-38 147
MS.gene011242.t1 AT5G63630 29.167 384 245 8 42 406 56 431 6.76e-37 141
MS.gene011242.t1 AT5G08610 29.442 394 231 10 42 406 384 759 3.77e-36 141
MS.gene011242.t1 AT5G08620 28.894 398 240 9 42 412 82 463 5.54e-36 139
MS.gene011242.t1 AT5G63630 29.167 384 245 8 42 406 250 625 6.42e-36 140
MS.gene011242.t1 AT2G07750 26.799 403 254 11 35 407 368 759 2.30e-34 135
MS.gene011242.t1 AT1G63250 28.150 373 230 9 35 377 321 685 7.79e-34 134
MS.gene011242.t1 AT5G54910 28.030 396 260 13 17 396 49 435 1.07e-32 130
MS.gene011242.t1 AT4G34910 26.277 411 246 8 41 397 47 454 6.24e-32 128
MS.gene011242.t1 AT3G16840 26.196 439 237 11 39 400 189 617 4.04e-30 123
MS.gene011242.t1 AT2G40700 25.280 447 252 13 41 406 31 476 4.04e-30 122
MS.gene011242.t1 AT3G16840 26.196 439 237 11 39 400 190 618 4.20e-30 123
MS.gene011242.t1 AT4G09730 26.289 388 250 9 37 396 109 488 3.45e-29 120
MS.gene011242.t1 AT5G19210 27.506 389 232 13 49 399 85 461 1.52e-28 117
MS.gene011242.t1 AT1G71280 29.167 312 181 9 47 345 24 308 2.82e-28 114
MS.gene011242.t1 AT1G71280 29.167 312 181 9 47 345 24 308 1.89e-27 114
MS.gene011242.t1 AT3G06980 27.895 380 232 13 41 383 375 749 5.96e-26 110
MS.gene011242.t1 AT4G15850 25.648 386 211 13 79 394 74 453 6.65e-25 107
MS.gene011242.t1 AT5G19210 25.625 320 178 12 123 399 2 304 5.85e-15 75.9
MS.gene011242.t1 AT5G19210 25.625 320 178 12 123 399 2 304 5.85e-15 75.9
MS.gene011242.t1 AT1G28180 34.959 123 63 3 63 177 5 118 3.54e-11 60.8

Find 103 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAGCAAGCTCCCTTGTT+GGG 0.279137 8.2:-75956822 None:intergenic
TCAGTGCCAGGCTTTGGTTC+TGG 0.283875 8.2:+75956798 MS.gene011242:CDS
AAGGAACAATTCCCCTTTGC+TGG 0.293854 8.2:-75956675 None:intergenic
CTAGTAATCTCAAGGGCTTC+AGG 0.311812 8.2:-75958016 None:intergenic
TGGTGATTTCCTTGGTGTTA+AGG 0.320580 8.2:+75956870 MS.gene011242:CDS
GCATCAAATTGTGATCCTTC+TGG 0.320747 8.2:-75955860 None:intergenic
TTGCATAAAGATGTTTGTTC+TGG 0.341471 8.2:+75957020 MS.gene011242:CDS
GCAACTGCCTGGCAAAATTC+AGG 0.350476 8.2:+75957967 MS.gene011242:CDS
CAACAGGCTCAGTCTGGAAC+TGG 0.352918 8.2:+75956721 MS.gene011242:CDS
CGTGACGAGCTGACCCTTGA+AGG 0.374139 8.2:+75958076 MS.gene011242:CDS
CGATGTGCAGCAGGTGTCTT+TGG 0.375487 8.2:+75958372 MS.gene011242:CDS
CACACTGTGGTTGGAACTCC+AGG 0.379858 8.2:+75956955 MS.gene011242:CDS
ATAGGTCGTAGTGGGCGATT+TGG 0.384227 8.2:+75958442 MS.gene011242:CDS
TGTTCCTTTCTGCAAAGGTC+TGG 0.389951 8.2:+75956690 MS.gene011242:CDS
TTCACGTGGTTTCAAGGATC+AGG 0.397596 8.2:+75957062 MS.gene011242:CDS
ATTAGTTCAGTGCCAGGCTT+TGG 0.399710 8.2:+75956792 MS.gene011242:CDS
CTGAAGCCCTTGAGATTACT+AGG 0.401600 8.2:+75958017 MS.gene011242:CDS
AGCAAATCAGCAACATTTGA+TGG 0.401883 8.2:-75958559 None:intergenic
TGATGATATCCCTAGTGTTC+TGG 0.402762 8.2:-75958285 None:intergenic
ATCGCCCACTACGACCTATA+CGG 0.403419 8.2:-75958438 None:intergenic
TGTTGAGCAAGCTCCCTTGT+TGG 0.405986 8.2:-75956823 None:intergenic
CGAGCTCTTGGTGATTTCCT+TGG 0.412365 8.2:+75956862 MS.gene011242:CDS
ATATCATCATGCGAGAGTTT+CGG 0.420470 8.2:+75958299 MS.gene011242:CDS
AATGCTTTCACGTGGTTTCA+AGG 0.431053 8.2:+75957056 MS.gene011242:CDS
TATGATAGCTTTGATGCAAT+GGG 0.435993 8.2:+75956063 MS.gene011242:CDS
ATCATGCGAGAGTTTCGGTT+TGG 0.443940 8.2:+75958304 MS.gene011242:CDS
GTGATTCAACAGGCTCAGTC+TGG 0.448350 8.2:+75956715 MS.gene011242:CDS
AAAACTGCTTGATACCTTCA+AGG 0.455444 8.2:-75958090 None:intergenic
GAGAAGGTTATGCGAGCTCT+TGG 0.461408 8.2:+75956850 MS.gene011242:CDS
GCCTTCTGCAATCCAGCAAA+GGG 0.463425 8.2:+75956663 MS.gene011242:CDS
AGGTCTGGATGTGATTCAAC+AGG 0.474852 8.2:+75956705 MS.gene011242:CDS
CCCCTTTGCTGGATTGCAGA+AGG 0.475034 8.2:-75956664 None:intergenic
CATCACAGGCTTGCCACTGA+TGG 0.482977 8.2:+75956009 MS.gene011242:intron
AAGGTCCATGCTTGTGTTGG+TGG 0.489722 8.2:+75956889 MS.gene011242:CDS
GACATCTTCCAGCAACTGCC+TGG 0.490264 8.2:+75957956 MS.gene011242:CDS
GAAAACTATCTCCACCGTAT+AGG 0.495708 8.2:+75958424 MS.gene011242:CDS
AAGACAGCAACATTCTGCTC+TGG 0.497997 8.2:+75956745 MS.gene011242:CDS
TTGAGCAAGCTCCCTTGTTG+GGG 0.501692 8.2:-75956821 None:intergenic
TCTCATAACCACCGACCTCT+TGG 0.503780 8.2:+75958339 MS.gene011242:CDS
CCGTGGTATCGATGTGCAGC+AGG 0.506103 8.2:+75958363 MS.gene011242:CDS
ATTCTACAATGTGATTATAG+AGG 0.506162 8.2:+75958531 MS.gene011242:CDS
TTATGGATTAGTTCAGTGCC+AGG 0.507436 8.2:+75956786 MS.gene011242:CDS
CTGCGAGGCATATATGCTTA+CGG 0.509659 8.2:+75956102 MS.gene011242:CDS
GGAATTGTTCCTTTCTGCAA+AGG 0.520763 8.2:+75956685 MS.gene011242:CDS
TCAATGTCGATAAGGAAGAA+TGG 0.524682 8.2:+75958116 MS.gene011242:CDS
TTGGGGCCAGAACCAAAGCC+TGG 0.526692 8.2:-75956804 None:intergenic
AGTGGGCGATTTGGAAGAAA+AGG 0.526967 8.2:+75958451 MS.gene011242:CDS
TGTGAATACCAGGCGGAAAG+TGG 0.532599 8.2:+75958198 MS.gene011242:CDS
CTCGGCCACTCACGGTGACA+TGG 0.537608 8.2:+75958261 MS.gene011242:CDS
ATATGATAGCTTTGATGCAA+TGG 0.538319 8.2:+75956062 MS.gene011242:CDS
CGCTTTACGAGGATTCTCAC+TGG 0.538645 8.2:-75958055 None:intergenic
GAGCCAGTCCACTTTCCGCC+TGG 0.540700 8.2:-75958206 None:intergenic
GTGACATGGACCAGAACACT+AGG 0.540994 8.2:+75958275 MS.gene011242:CDS
CTTTGGTTCTGGCCCCAACA+AGG 0.541787 8.2:+75956809 MS.gene011242:CDS
GTTAAGGTCCATGCTTGTGT+TGG 0.542757 8.2:+75956886 MS.gene011242:CDS
ATACCAGGCGGAAAGTGGAC+TGG 0.545618 8.2:+75958203 MS.gene011242:CDS
GGCCTTCTGCAATCCAGCAA+AGG 0.549743 8.2:+75956662 MS.gene011242:CDS
AGGTCCATGCTTGTGTTGGT+GGG 0.553229 8.2:+75956890 MS.gene011242:CDS
CCACAGTGTGAACACCAGCT+TGG 0.554605 8.2:-75956942 None:intergenic
TGAACTTCCTAGTAATCTCA+AGG 0.555172 8.2:-75958024 None:intergenic
AACAGGCTCAGTCTGGAACT+GGG 0.561973 8.2:+75956722 MS.gene011242:CDS
ATCACAGGCTTGCCACTGAT+GGG 0.563840 8.2:+75956010 MS.gene011242:intron
ACATCCAGACCTTTGCAGAA+AGG 0.567685 8.2:-75956694 None:intergenic
TTTGGTTCTGGCCCCAACAA+GGG 0.567948 8.2:+75956810 MS.gene011242:CDS
AACATGTCAAACACACGCCC+TGG 0.573687 8.2:-75956973 None:intergenic
CTGGTCCATGTCACCGTGAG+TGG 0.576813 8.2:-75958266 None:intergenic
CTGCCTGGCAAAATTCAGGT+TGG 0.586799 8.2:+75957971 MS.gene011242:CDS
CTCCACCGTATAGGTCGTAG+TGG 0.587754 8.2:+75958433 MS.gene011242:CDS
AATAGATGATGCTAGAATGT+TGG 0.588211 8.2:+75958495 MS.gene011242:CDS
GCGGAAAGTGGACTGGCTCA+CGG 0.597521 8.2:+75958210 MS.gene011242:CDS
GAAGAATTCTTGCCCATCAG+TGG 0.598468 8.2:-75956022 None:intergenic
TTGTCCCACCAACACAAGCA+TGG 0.598938 8.2:-75956894 None:intergenic
GATCAGCGCATTCTCCAAGC+TGG 0.599910 8.2:+75956928 MS.gene011242:CDS
CCTGCTGCACATCGATACCA+CGG 0.600509 8.2:-75958363 None:intergenic
GATACCACGGGCCAAGAGGT+CGG 0.604438 8.2:-75958350 None:intergenic
AAGCAGAGATCATACAGTCT+CGG 0.606411 8.2:+75958243 MS.gene011242:CDS
CTGCTGCACATCGATACCAC+GGG 0.609965 8.2:-75958362 None:intergenic
GCTGGTGTTCACACTGTGGT+TGG 0.610062 8.2:+75956946 MS.gene011242:CDS
ACCACCGACCTCTTGGCCCG+TGG 0.610628 8.2:+75958346 MS.gene011242:CDS
ATGGCAGGTTTGGCTCCAGA+AGG 0.617096 8.2:+75955845 MS.gene011242:CDS
CATCGATACCACGGGCCAAG+AGG 0.618009 8.2:-75958354 None:intergenic
CATACAGTCTCGGCCACTCA+CGG 0.621643 8.2:+75958253 MS.gene011242:CDS
GCTTGCTCAACAGATTGAGA+AGG 0.622094 8.2:+75956834 MS.gene011242:CDS
CCAAGCTGGTGTTCACACTG+TGG 0.627106 8.2:+75956942 MS.gene011242:CDS
AAACTGCTTGATACCTTCAA+GGG 0.627213 8.2:-75958089 None:intergenic
GGCGTGTGTTTGACATGTTG+CGG 0.627441 8.2:+75956977 MS.gene011242:CDS
GTGTGTTTGACATGTTGCGG+AGG 0.646901 8.2:+75956980 MS.gene011242:CDS
ACACTGTGGTTGGAACTCCA+GGG 0.658137 8.2:+75956956 MS.gene011242:CDS
TCAGCTCGTCACGCTTTACG+AGG 0.661195 8.2:-75958066 None:intergenic
TGACATGGACCAGAACACTA+GGG 0.667828 8.2:+75958276 MS.gene011242:CDS
GAACTTCCTAGTAATCTCAA+GGG 0.668909 8.2:-75958023 None:intergenic
GTAATCTCAAGGGCTTCAGG+TGG 0.671800 8.2:-75958013 None:intergenic
TCCACCGTATAGGTCGTAGT+GGG 0.678647 8.2:+75958434 MS.gene011242:CDS
TGGTGGGACAAGTGTTCGTG+AGG 0.680915 8.2:+75956906 MS.gene011242:CDS
ACCACGGGCCAAGAGGTCGG+TGG 0.685004 8.2:-75958347 None:intergenic
CTGCAAGAAAATCTTCTGCG+AGG 0.686300 8.2:+75956087 MS.gene011242:CDS
ATCATATACTTCATCATACG+AGG 0.700751 8.2:-75956046 None:intergenic
AAGCATGGACCTTAACACCA+AGG 0.708929 8.2:-75956879 None:intergenic
CCTTCTGCAATCCAGCAAAG+GGG 0.710070 8.2:+75956664 MS.gene011242:CDS
GCTGATGAAATGCTTTCACG+TGG 0.720414 8.2:+75957048 MS.gene011242:CDS
TGATGGCGAGAGTCTCGTAG+AGG 0.723309 8.2:-75958159 None:intergenic
GCCCACTACGACCTATACGG+TGG 0.731077 8.2:-75958435 None:intergenic
ATGATAGCTTTGATGCAATG+GGG 0.761244 8.2:+75956064 MS.gene011242:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAAAAAGAGAAAAAA+AGG - chr8.2:75957179-75957198 None:intergenic 10.0%
!! ATTAATAGTAAAGAATATGA+AGG - chr8.2:75955928-75955947 None:intergenic 15.0%
!! GAATAATTAATGTATCTTAT+TGG + chr8.2:75957301-75957320 MS.gene011242:intron 15.0%
!! GAATGAATAAATAAAGAAAA+GGG - chr8.2:75957810-75957829 None:intergenic 15.0%
!! TACCAAAAAAAAAAAGATAT+AGG + chr8.2:75957767-75957786 MS.gene011242:intron 15.0%
!!! GTTAATTGTTTCTTATAATA+AGG + chr8.2:75957366-75957385 MS.gene011242:intron 15.0%
!!! TAAGAAACAATTAACTTTTT+TGG - chr8.2:75957361-75957380 None:intergenic 15.0%
!! AAGAATAAGCACTTAAAATA+AGG - chr8.2:75956149-75956168 None:intergenic 20.0%
!! AGAATAAGCACTTAAAATAA+GGG - chr8.2:75956148-75956167 None:intergenic 20.0%
!! ATCAAAATTCAAAACACATT+AGG - chr8.2:75956221-75956240 None:intergenic 20.0%
!! CGAATGAATAAATAAAGAAA+AGG - chr8.2:75957811-75957830 None:intergenic 20.0%
!! GTAATATTATTATGTTGTTC+TGG + chr8.2:75956353-75956372 MS.gene011242:intron 20.0%
!! TGTGTTTCAAAATTATTTAC+CGG + chr8.2:75956439-75956458 MS.gene011242:intron 20.0%
!!! AATATTACGTTTTACTAGAA+GGG - chr8.2:75956341-75956360 None:intergenic 20.0%
!!! GTCAACTTTTTCTTATAATA+AGG - chr8.2:75957267-75957286 None:intergenic 20.0%
!!! GTCCTATATCTTTTTTTTTT+TGG - chr8.2:75957772-75957791 None:intergenic 20.0%
!!! GTTTTGTAATTATATTGCAA+TGG + chr8.2:75956383-75956402 MS.gene011242:intron 20.0%
!!! TAATATTACGTTTTACTAGA+AGG - chr8.2:75956342-75956361 None:intergenic 20.0%
! AAAAGGGAAAAATAATCATG+CGG - chr8.2:75957794-75957813 None:intergenic 25.0%
! AAGCACTTTATAATTTGAAC+AGG - chr8.2:75956261-75956280 None:intergenic 25.0%
! AATAAGCACTTAAAATAAGG+GGG - chr8.2:75956146-75956165 None:intergenic 25.0%
! ACCACTTTATAAATGGAAAA+TGG - chr8.2:75957436-75957455 None:intergenic 25.0%
! AGCACTTTATAATTTGAACA+GGG - chr8.2:75956260-75956279 None:intergenic 25.0%
! ATTCTACAATGTGATTATAG+AGG + chr8.2:75958531-75958550 MS.gene011242:CDS 25.0%
! GAATAAGCACTTAAAATAAG+GGG - chr8.2:75956147-75956166 None:intergenic 25.0%
! TCAATTAGGATTTGTGTTAA+AGG + chr8.2:75957545-75957564 MS.gene011242:intron 25.0%
! TTAAGTGCTTATTCTTGTTA+TGG + chr8.2:75956153-75956172 MS.gene011242:intron 25.0%
! TTGAACGGAAAATTGAAAAA+AGG + chr8.2:75957672-75957691 MS.gene011242:intron 25.0%
! TTTCATAATGTCATGTAAGA+TGG - chr8.2:75957911-75957930 None:intergenic 25.0%
!! CTTTTTCTTATAATAAGGAC+CGG - chr8.2:75957262-75957281 None:intergenic 25.0%
!! GACATTATGAAAACTTTTGT+TGG + chr8.2:75957919-75957938 MS.gene011242:intron 25.0%
!! TCCATTTTCCATTTATAAAG+TGG + chr8.2:75957432-75957451 MS.gene011242:intron 25.0%
!! TTGTTTCTTATAATAAGGAC+CGG + chr8.2:75957371-75957390 MS.gene011242:intron 25.0%
!!! AGTATTTTTAAACATGCACA+AGG + chr8.2:75957398-75957417 MS.gene011242:intron 25.0%
!!! ATGTTTTACCTTGTTTTGAA+AGG + chr8.2:75956631-75956650 MS.gene011242:intron 25.0%
AATAGATGATGCTAGAATGT+TGG + chr8.2:75958495-75958514 MS.gene011242:CDS 30.0%
AATGAGTACATCTTTCATGA+AGG + chr8.2:75956534-75956553 MS.gene011242:intron 30.0%
ACAAATCCTAATTGAGAACT+CGG - chr8.2:75957540-75957559 None:intergenic 30.0%
AGTATAAAAGACTGAAACAG+TGG - chr8.2:75957235-75957254 None:intergenic 30.0%
ATCATATACTTCATCATACG+AGG - chr8.2:75956049-75956068 None:intergenic 30.0%
ATGGAATTGGTAAAGTCAAA+AGG - chr8.2:75957111-75957130 None:intergenic 30.0%
ATGTTTAAAAATACTCCCTC+CGG - chr8.2:75957393-75957412 None:intergenic 30.0%
ATTTGTGTTAAAGGAAAGCA+GGG + chr8.2:75957554-75957573 MS.gene011242:intron 30.0%
CATAGCAACCACTTTATAAA+TGG - chr8.2:75957443-75957462 None:intergenic 30.0%
CGTCAAATTACAGGAAAAAA+AGG - chr8.2:75955976-75955995 None:intergenic 30.0%
CTGGAAGAGAAATGATAAAA+TGG + chr8.2:75956462-75956481 MS.gene011242:intron 30.0%
GAAACTGTGTTTACAAACAA+TGG - chr8.2:75957130-75957149 None:intergenic 30.0%
GTATAAAAGACTGAAACAGT+GGG - chr8.2:75957234-75957253 None:intergenic 30.0%
GTGTTTACAAACAATGGAAT+TGG - chr8.2:75957124-75957143 None:intergenic 30.0%
TATAAAAGACTGAAACAGTG+GGG - chr8.2:75957233-75957252 None:intergenic 30.0%
TCTCAAAACCTTTCAAAACA+AGG - chr8.2:75956642-75956661 None:intergenic 30.0%
TTGCATAAAGATGTTTGTTC+TGG + chr8.2:75957020-75957039 MS.gene011242:CDS 30.0%
TTTAGTAAAAATGTCTCGTG+TGG + chr8.2:75957195-75957214 MS.gene011242:intron 30.0%
TTTCAAAATTATTTACCGGC+TGG + chr8.2:75956443-75956462 MS.gene011242:intron 30.0%
! CCATTTCAATGGTTTTTGAA+CGG + chr8.2:75957657-75957676 MS.gene011242:intron 30.0%
! GTGATTTTGTATGCACTAAT+AGG - chr8.2:75957627-75957646 None:intergenic 30.0%
! GTTTTATGTCAATGTCGATA+AGG + chr8.2:75958108-75958127 MS.gene011242:CDS 30.0%
!! ATATGATAGCTTTGATGCAA+TGG + chr8.2:75956062-75956081 MS.gene011242:CDS 30.0%
!! CATAAACTTTTAGCTAGACA+TGG - chr8.2:75957886-75957905 None:intergenic 30.0%
!! TATGATAGCTTTGATGCAAT+GGG + chr8.2:75956063-75956082 MS.gene011242:CDS 30.0%
!!! TTGTTTTGAAAGGTTTTGAG+AGG + chr8.2:75956641-75956660 MS.gene011242:intron 30.0%
AAAAATGACACTCTGAGTGA+TGG - chr8.2:75958179-75958198 None:intergenic 35.0%
AAAACTGCTTGATACCTTCA+AGG - chr8.2:75958093-75958112 None:intergenic 35.0%
AAACTGCTTGATACCTTCAA+GGG - chr8.2:75958092-75958111 None:intergenic 35.0%
AAGGTTTACACTGTAGAATC+TGG + chr8.2:75956189-75956208 MS.gene011242:intron 35.0%
ACAAATCAGGAGAGATTAAG+GGG + chr8.2:75957592-75957611 MS.gene011242:intron 35.0%
AGCAAATCAGCAACATTTGA+TGG - chr8.2:75958562-75958581 None:intergenic 35.0%
ATAAAAGACTGAAACAGTGG+GGG - chr8.2:75957232-75957251 None:intergenic 35.0%
ATATCATCATGCGAGAGTTT+CGG + chr8.2:75958299-75958318 MS.gene011242:CDS 35.0%
ATTGAGAACTCGGAAATTGA+AGG - chr8.2:75957530-75957549 None:intergenic 35.0%
CAATTTCCGAGTTCTCAATT+AGG + chr8.2:75957531-75957550 MS.gene011242:intron 35.0%
CACAAATCAGGAGAGATTAA+GGG + chr8.2:75957591-75957610 MS.gene011242:intron 35.0%
CATACAAAATCACCCATTAG+TGG + chr8.2:75957634-75957653 MS.gene011242:intron 35.0%
CATGAGTTATATATCCCACA+AGG + chr8.2:75957493-75957512 MS.gene011242:intron 35.0%
CCGTTCAAAAACCATTGAAA+TGG - chr8.2:75957660-75957679 None:intergenic 35.0%
GAACTTCCTAGTAATCTCAA+GGG - chr8.2:75958026-75958045 None:intergenic 35.0%
GAATTGGTAAAGTCAAAAGG+TGG - chr8.2:75957108-75957127 None:intergenic 35.0%
GATTTGTGTTAAAGGAAAGC+AGG + chr8.2:75957553-75957572 MS.gene011242:intron 35.0%
GTCTTGTACATTAACATCAC+AGG + chr8.2:75955995-75956014 MS.gene011242:intron 35.0%
TAACTTCGAAAACATGCACA+CGG - chr8.2:75957702-75957721 None:intergenic 35.0%
TATATGCTTACGGTATGTAC+TGG + chr8.2:75956112-75956131 MS.gene011242:intron 35.0%
TCAATGTCGATAAGGAAGAA+TGG + chr8.2:75958116-75958135 MS.gene011242:CDS 35.0%
TCACAAATCAGGAGAGATTA+AGG + chr8.2:75957590-75957609 MS.gene011242:intron 35.0%
TGAACTTCCTAGTAATCTCA+AGG - chr8.2:75958027-75958046 None:intergenic 35.0%
TGTACAAGACGTCAAATTAC+AGG - chr8.2:75955985-75956004 None:intergenic 35.0%
TGTTTGTAAACACAGTTTCG+TGG + chr8.2:75957131-75957150 MS.gene011242:intron 35.0%
TTACACTGTAGAATCTGGAT+TGG + chr8.2:75956194-75956213 MS.gene011242:intron 35.0%
TTCTTATAATAAGGACCGGA+GGG + chr8.2:75957375-75957394 MS.gene011242:intron 35.0%
TTCTTATAATAAGGACCGGA+GGG - chr8.2:75957394-75957375 None:intergenic 35.0%
TTGAGAACTCGGAAATTGAA+GGG - chr8.2:75957529-75957548 None:intergenic 35.0%
TTTATCATTTCTCTTCCAGC+CGG - chr8.2:75956461-75956480 None:intergenic 35.0%
TTTCTTATAATAAGGACCGG+AGG + chr8.2:75957374-75957393 MS.gene011242:intron 35.0%
TTTCTTATAATAAGGACCGG+AGG - chr8.2:75957393-75957374 None:intergenic 35.0%
TTTGTGTTAAAGGAAAGCAG+GGG + chr8.2:75957555-75957574 MS.gene011242:intron 35.0%
! ATTTTGCAGCAGCTTGATTA+TGG + chr8.2:75956769-75956788 MS.gene011242:CDS 35.0%
! GAAGGCATAAATCACAAATC+AGG + chr8.2:75957579-75957598 MS.gene011242:intron 35.0%
!! ATGATAGCTTTGATGCAATG+GGG + chr8.2:75956064-75956083 MS.gene011242:CDS 35.0%
!! TCATTTTTGTGAATACCAGG+CGG + chr8.2:75958191-75958210 MS.gene011242:CDS 35.0%
!!! AGATAGTTTTCAGGTTGAGT+TGG - chr8.2:75958415-75958434 None:intergenic 35.0%
!!! GATAGTTTTCAGGTTGAGTT+GGG - chr8.2:75958414-75958433 None:intergenic 35.0%
!!! GTGTCATTTTTGTGAATACC+AGG + chr8.2:75958188-75958207 MS.gene011242:CDS 35.0%
AAATCAGGAGAGATTAAGGG+GGG + chr8.2:75957594-75957613 MS.gene011242:intron 40.0%
AACACAGTTTCGTGGTAGTT+TGG + chr8.2:75957139-75957158 MS.gene011242:intron 40.0%
AAGCAGAGATCATACAGTCT+CGG + chr8.2:75958243-75958262 MS.gene011242:CDS 40.0%
AATGCTTTCACGTGGTTTCA+AGG + chr8.2:75957056-75957075 MS.gene011242:CDS 40.0%
ACCATTGAAATGGCCACTAA+TGG - chr8.2:75957650-75957669 None:intergenic 40.0%
CAAATCAGGAGAGATTAAGG+GGG + chr8.2:75957593-75957612 MS.gene011242:intron 40.0%
CCATTGAAATGGCCACTAAT+GGG - chr8.2:75957649-75957668 None:intergenic 40.0%
CTATGTCTGTTACATGGATG+AGG + chr8.2:75957458-75957477 MS.gene011242:intron 40.0%
GAAAACTATCTCCACCGTAT+AGG + chr8.2:75958424-75958443 MS.gene011242:CDS 40.0%
GCATCAAATTGTGATCCTTC+TGG - chr8.2:75955863-75955882 None:intergenic 40.0%
GGAATTGTTCCTTTCTGCAA+AGG + chr8.2:75956685-75956704 MS.gene011242:CDS 40.0%
TGATGATATCCCTAGTGTTC+TGG - chr8.2:75958288-75958307 None:intergenic 40.0%
TGGTTGCTATGTCTGTTACA+TGG + chr8.2:75957452-75957471 MS.gene011242:intron 40.0%
TTATGGTAGCTCAGTAAGCA+AGG + chr8.2:75956170-75956189 MS.gene011242:intron 40.0%
! ATACGGTGGAGATAGTTTTC+AGG - chr8.2:75958424-75958443 None:intergenic 40.0%
! TCAGTCTTTTATACTCCCTC+CGG + chr8.2:75957240-75957259 MS.gene011242:intron 40.0%
!! TGGTGATTTCCTTGGTGTTA+AGG + chr8.2:75956870-75956889 MS.gene011242:CDS 40.0%
!! TTATGGATTAGTTCAGTGCC+AGG + chr8.2:75956786-75956805 MS.gene011242:CDS 40.0%
AAGACAGCAACATTCTGCTC+TGG + chr8.2:75956745-75956764 MS.gene011242:CDS 45.0%
AAGCATGGACCTTAACACCA+AGG - chr8.2:75956882-75956901 None:intergenic 45.0%
AAGGAACAATTCCCCTTTGC+TGG - chr8.2:75956678-75956697 None:intergenic 45.0%
AAGGGAAATGCAAGTCCTTG+TGG - chr8.2:75957511-75957530 None:intergenic 45.0%
ACATCCAGACCTTTGCAGAA+AGG - chr8.2:75956697-75956716 None:intergenic 45.0%
AGGGAAATGCAAGTCCTTGT+GGG - chr8.2:75957510-75957529 None:intergenic 45.0%
AGGTCTGGATGTGATTCAAC+AGG + chr8.2:75956705-75956724 MS.gene011242:CDS 45.0%
ATCATGCGAGAGTTTCGGTT+TGG + chr8.2:75958304-75958323 MS.gene011242:CDS 45.0%
ATTAGTTCAGTGCCAGGCTT+TGG + chr8.2:75956792-75956811 MS.gene011242:CDS 45.0%
CCCATTAGTGGCCATTTCAA+TGG + chr8.2:75957646-75957665 MS.gene011242:intron 45.0%
CTAGTAATCTCAAGGGCTTC+AGG - chr8.2:75958019-75958038 None:intergenic 45.0%
CTGAAGCCCTTGAGATTACT+AGG + chr8.2:75958017-75958036 MS.gene011242:CDS 45.0%
CTGCAAGAAAATCTTCTGCG+AGG + chr8.2:75956087-75956106 MS.gene011242:CDS 45.0%
CTGCGAGGCATATATGCTTA+CGG + chr8.2:75956102-75956121 MS.gene011242:CDS 45.0%
GAAGAATTCTTGCCCATCAG+TGG - chr8.2:75956025-75956044 None:intergenic 45.0%
GCTGATGAAATGCTTTCACG+TGG + chr8.2:75957048-75957067 MS.gene011242:CDS 45.0%
GCTTGCTCAACAGATTGAGA+AGG + chr8.2:75956834-75956853 MS.gene011242:CDS 45.0%
GTTAAGGTCCATGCTTGTGT+TGG + chr8.2:75956886-75956905 MS.gene011242:CDS 45.0%
TGACATGGACCAGAACACTA+GGG + chr8.2:75958276-75958295 MS.gene011242:CDS 45.0%
TGTTCCTTTCTGCAAAGGTC+TGG + chr8.2:75956690-75956709 MS.gene011242:CDS 45.0%
TTAAAGGAAAGCAGGGGAGA+AGG + chr8.2:75957561-75957580 MS.gene011242:intron 45.0%
TTCACGTGGTTTCAAGGATC+AGG + chr8.2:75957062-75957081 MS.gene011242:CDS 45.0%
! ACTCCAACCTGAATTTTGCC+AGG - chr8.2:75957977-75957996 None:intergenic 45.0%
! AGTGGGCGATTTGGAAGAAA+AGG + chr8.2:75958451-75958470 MS.gene011242:CDS 45.0%
AACATGTCAAACACACGCCC+TGG - chr8.2:75956976-75956995 None:intergenic 50.0%
AAGGTCCATGCTTGTGTTGG+TGG + chr8.2:75956889-75956908 MS.gene011242:CDS 50.0%
ACACTGTGGTTGGAACTCCA+GGG + chr8.2:75956956-75956975 MS.gene011242:CDS 50.0%
ATCACAGGCTTGCCACTGAT+GGG + chr8.2:75956010-75956029 MS.gene011242:intron 50.0%
ATCGCCCACTACGACCTATA+CGG - chr8.2:75958441-75958460 None:intergenic 50.0%
CCTTCTGCAATCCAGCAAAG+GGG + chr8.2:75956664-75956683 MS.gene011242:CDS 50.0%
CGCTTTACGAGGATTCTCAC+TGG - chr8.2:75958058-75958077 None:intergenic 50.0%
CTGCCTGGCAAAATTCAGGT+TGG + chr8.2:75957971-75957990 MS.gene011242:CDS 50.0%
GAGAAGGTTATGCGAGCTCT+TGG + chr8.2:75956850-75956869 MS.gene011242:CDS 50.0%
GCAACTGCCTGGCAAAATTC+AGG + chr8.2:75957967-75957986 MS.gene011242:CDS 50.0%
GCCTTCTGCAATCCAGCAAA+GGG + chr8.2:75956663-75956682 MS.gene011242:CDS 50.0%
GGCGTGTGTTTGACATGTTG+CGG + chr8.2:75956977-75956996 MS.gene011242:CDS 50.0%
GTAATCTCAAGGGCTTCAGG+TGG - chr8.2:75958016-75958035 None:intergenic 50.0%
GTGACATGGACCAGAACACT+AGG + chr8.2:75958275-75958294 MS.gene011242:CDS 50.0%
GTGATTCAACAGGCTCAGTC+TGG + chr8.2:75956715-75956734 MS.gene011242:CDS 50.0%
GTGTGTTTGACATGTTGCGG+AGG + chr8.2:75956980-75956999 MS.gene011242:CDS 50.0%
GTTGAGCAAGCTCCCTTGTT+GGG - chr8.2:75956825-75956844 None:intergenic 50.0%
TCCACCGTATAGGTCGTAGT+GGG + chr8.2:75958434-75958453 MS.gene011242:CDS 50.0%
TCTCATAACCACCGACCTCT+TGG + chr8.2:75958339-75958358 MS.gene011242:CDS 50.0%
TGTGAATACCAGGCGGAAAG+TGG + chr8.2:75958198-75958217 MS.gene011242:CDS 50.0%
TGTTGAGCAAGCTCCCTTGT+TGG - chr8.2:75956826-75956845 None:intergenic 50.0%
TTGAGCAAGCTCCCTTGTTG+GGG - chr8.2:75956824-75956843 None:intergenic 50.0%
TTGTCCCACCAACACAAGCA+TGG - chr8.2:75956897-75956916 None:intergenic 50.0%
! AACAGGCTCAGTCTGGAACT+GGG + chr8.2:75956722-75956741 MS.gene011242:CDS 50.0%
! AGGTCCATGCTTGTGTTGGT+GGG + chr8.2:75956890-75956909 MS.gene011242:CDS 50.0%
! CGAGCTCTTGGTGATTTCCT+TGG + chr8.2:75956862-75956881 MS.gene011242:CDS 50.0%
! CGTGGTAGTTTGGTGAAGCA+TGG + chr8.2:75957149-75957168 MS.gene011242:intron 50.0%
! GAATTTTGCCAGGCAGTTGC+TGG - chr8.2:75957967-75957986 None:intergenic 50.0%
!! ATAGGTCGTAGTGGGCGATT+TGG + chr8.2:75958442-75958461 MS.gene011242:CDS 50.0%
!! TTTGGTTCTGGCCCCAACAA+GGG + chr8.2:75956810-75956829 MS.gene011242:CDS 50.0%
ATACCAGGCGGAAAGTGGAC+TGG + chr8.2:75958203-75958222 MS.gene011242:CDS 55.0%
CACACTGTGGTTGGAACTCC+AGG + chr8.2:75956955-75956974 MS.gene011242:CDS 55.0%
CATACAGTCTCGGCCACTCA+CGG + chr8.2:75958253-75958272 MS.gene011242:CDS 55.0%
CATCACAGGCTTGCCACTGA+TGG + chr8.2:75956009-75956028 MS.gene011242:intron 55.0%
CCAAGCTGGTGTTCACACTG+TGG + chr8.2:75956942-75956961 MS.gene011242:CDS 55.0%
CCACAGTGTGAACACCAGCT+TGG - chr8.2:75956945-75956964 None:intergenic 55.0%
CCCCTTTGCTGGATTGCAGA+AGG - chr8.2:75956667-75956686 None:intergenic 55.0%
CCTGCTGCACATCGATACCA+CGG - chr8.2:75958366-75958385 None:intergenic 55.0%
CGATGTGCAGCAGGTGTCTT+TGG + chr8.2:75958372-75958391 MS.gene011242:CDS 55.0%
CTCCACCGTATAGGTCGTAG+TGG + chr8.2:75958433-75958452 MS.gene011242:CDS 55.0%
CTGCTGCACATCGATACCAC+GGG - chr8.2:75958365-75958384 None:intergenic 55.0%
GACATCTTCCAGCAACTGCC+TGG + chr8.2:75957956-75957975 MS.gene011242:CDS 55.0%
GATCAGCGCATTCTCCAAGC+TGG + chr8.2:75956928-75956947 MS.gene011242:CDS 55.0%
GCTGGTGTTCACACTGTGGT+TGG + chr8.2:75956946-75956965 MS.gene011242:CDS 55.0%
GGCCTTCTGCAATCCAGCAA+AGG + chr8.2:75956662-75956681 MS.gene011242:CDS 55.0%
TCAGCTCGTCACGCTTTACG+AGG - chr8.2:75958069-75958088 None:intergenic 55.0%
TGGTGGGACAAGTGTTCGTG+AGG + chr8.2:75956906-75956925 MS.gene011242:CDS 55.0%
! ATGGCAGGTTTGGCTCCAGA+AGG + chr8.2:75955845-75955864 MS.gene011242:CDS 55.0%
! CAACAGGCTCAGTCTGGAAC+TGG + chr8.2:75956721-75956740 MS.gene011242:CDS 55.0%
! TCAGTGCCAGGCTTTGGTTC+TGG + chr8.2:75956798-75956817 MS.gene011242:CDS 55.0%
! TGATGGCGAGAGTCTCGTAG+AGG - chr8.2:75958162-75958181 None:intergenic 55.0%
!! CTTTGGTTCTGGCCCCAACA+AGG + chr8.2:75956809-75956828 MS.gene011242:CDS 55.0%
CATCGATACCACGGGCCAAG+AGG - chr8.2:75958357-75958376 None:intergenic 60.0%
CGTGACGAGCTGACCCTTGA+AGG + chr8.2:75958076-75958095 MS.gene011242:CDS 60.0%
CTGGTCCATGTCACCGTGAG+TGG - chr8.2:75958269-75958288 None:intergenic 60.0%
GATACCACGGGCCAAGAGGT+CGG - chr8.2:75958353-75958372 None:intergenic 60.0%
GCCCACTACGACCTATACGG+TGG - chr8.2:75958438-75958457 None:intergenic 60.0%
TTGGGGCCAGAACCAAAGCC+TGG - chr8.2:75956807-75956826 None:intergenic 60.0%
!! CCGTGGTATCGATGTGCAGC+AGG + chr8.2:75958363-75958382 MS.gene011242:CDS 60.0%
!! GCGGAAAGTGGACTGGCTCA+CGG + chr8.2:75958210-75958229 MS.gene011242:CDS 60.0%
CTCGGCCACTCACGGTGACA+TGG + chr8.2:75958261-75958280 MS.gene011242:CDS 65.0%
GAGCCAGTCCACTTTCCGCC+TGG - chr8.2:75958209-75958228 None:intergenic 65.0%
ACCACCGACCTCTTGGCCCG+TGG + chr8.2:75958346-75958365 MS.gene011242:CDS 70.0%
ACCACGGGCCAAGAGGTCGG+TGG - chr8.2:75958350-75958369 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 75955845 75958585 75955845 ID=MS.gene011242
chr8.2 mRNA 75955845 75958585 75955845 ID=MS.gene011242.t1;Parent=MS.gene011242
chr8.2 exon 75955845 75955912 75955845 ID=MS.gene011242.t1.exon1;Parent=MS.gene011242.t1
chr8.2 CDS 75955845 75955912 75955845 ID=cds.MS.gene011242.t1;Parent=MS.gene011242.t1
chr8.2 exon 75956017 75956123 75956017 ID=MS.gene011242.t1.exon2;Parent=MS.gene011242.t1
chr8.2 CDS 75956017 75956123 75956017 ID=cds.MS.gene011242.t1;Parent=MS.gene011242.t1
chr8.2 exon 75956653 75957083 75956653 ID=MS.gene011242.t1.exon3;Parent=MS.gene011242.t1
chr8.2 CDS 75956653 75957083 75956653 ID=cds.MS.gene011242.t1;Parent=MS.gene011242.t1
chr8.2 exon 75957950 75958585 75957950 ID=MS.gene011242.t1.exon4;Parent=MS.gene011242.t1
chr8.2 CDS 75957950 75958585 75957950 ID=cds.MS.gene011242.t1;Parent=MS.gene011242.t1
Gene Sequence

>MS.gene011242

ATGGCAGGTTTGGCTCCAGAAGGATCACAATTTGATGCTAATCATTATGACTCTAAGATGAATGAACTGTGTGTTTCTGTCCTTCATATTCTTTACTATTAATTATGATTGAATTTGTTATTCATGTACCTTTTTTTCCTGTAATTTGACGTCTTGTACATTAACATCACAGGCTTGCCACTGATGGGCAAGAATTCTTCACCTCGTATGATGAAGTATATGATAGCTTTGATGCAATGGGGCTGCAAGAAAATCTTCTGCGAGGCATATATGCTTACGGTATGTACTGGAAAATTGACCCCCTTATTTTAAGTGCTTATTCTTGTTATGGTAGCTCAGTAAGCAAGGTTTACACTGTAGAATCTGGATTGGACCTAATGTGTTTTGAATTTTGATATATTTGATGTATTCTCCCTGTTCAAATTATAAAGTGCTTATAATATATTGATGCAATCAACTCTTCAAGATCTTTTGACAAAAATTTAATACTAATCCCTTCTAGTAAAACGTAATATTATTATGTTGTTCTGGATTTATTGTTTTGTAATTATATTGCAATGGTAATGTGATTGAATCAATTATTTTAGATATAACTGTGTTTCAAAATTATTTACCGGCTGGAAGAGAAATGATAAAATGGACAAATGTGATTGAATCAAATAATTTTCTAAATTTTTTAATGTTTTAAAAATGAGTACATCTTTCATGAAGGCATCACTAATATACATGTTAAAAATAAATATTACTCTTGCTAGTTGCTACAGTTATCATGAAATCATGTGTGTCATGTTTTACCTTGTTTTGAAAGGTTTTGAGAGGCCTTCTGCAATCCAGCAAAGGGGAATTGTTCCTTTCTGCAAAGGTCTGGATGTGATTCAACAGGCTCAGTCTGGAACTGGGAAGACAGCAACATTCTGCTCTGGAATTTTGCAGCAGCTTGATTATGGATTAGTTCAGTGCCAGGCTTTGGTTCTGGCCCCAACAAGGGAGCTTGCTCAACAGATTGAGAAGGTTATGCGAGCTCTTGGTGATTTCCTTGGTGTTAAGGTCCATGCTTGTGTTGGTGGGACAAGTGTTCGTGAGGATCAGCGCATTCTCCAAGCTGGTGTTCACACTGTGGTTGGAACTCCAGGGCGTGTGTTTGACATGTTGCGGAGGCAGTCTCTACGCTCAGATTGCATAAAGATGTTTGTTCTGGATGAAGCTGATGAAATGCTTTCACGTGGTTTCAAGGATCAGGTTCGTCAATATGCTCATTTTCCACCTTTTGACTTTACCAATTCCATTGTTTGTAAACACAGTTTCGTGGTAGTTTGGTGAAGCATGGATTTCCTTTTTTTCTCTTTTTTATTTAGTAAAAATGTCTCGTGTGGTTCTTTTTCTTCCCCCACTGTTTCAGTCTTTTATACTCCCTCCGGTCCTTATTATAAGAAAAAGTTGACTTTTTAGATTCGTAGAATAATTAATGTATCTTATTGGAAATATAGACTAGATACATCACTTGCACAATGAACCAAAAAAGTTAATTGTTTCTTATAATAAGGACCGGAGGGAGTATTTTTAAACATGCACAAGGTTTTCACTTCATCCATTTTCCATTTATAAAGTGGTTGCTATGTCTGTTACATGGATGAGGAAGCTGTAACGACATGAGTTATATATCCCACAAGGACTTGCATTTCCCTTCAATTTCCGAGTTCTCAATTAGGATTTGTGTTAAAGGAAAGCAGGGGAGAAGGCATAAATCACAAATCAGGAGAGATTAAGGGGGGCTATTATCCTATTAGTGCATACAAAATCACCCATTAGTGGCCATTTCAATGGTTTTTGAACGGAAAATTGAAAAAAGGAAAACCGTGTGCATGTTTTCGAAGTTAAAAGACTGAAATTTAAAATAATGAAGATAAAAAACACTAATTTGTTACCAAAAAAAAAAAGATATAGGACCGCATGATTATTTTTCCCTTTTCTTTATTTATTCATTCGTTTACTATAAAATGAAAAAGAAGTAAGTTTTACTAACTGAATCTTAATGAAGCCATGTCTAGCTAAAAGTTTATGTTCCATCTTACATGACATTATGAAAACTTTTGTTGGTGTTGCAGATCTATGACATCTTCCAGCAACTGCCTGGCAAAATTCAGGTTGGAGTATTTTCTGCTACAATGCCACCTGAAGCCCTTGAGATTACTAGGAAGTTCATGAATAAGCCAGTGAGAATCCTCGTAAAGCGTGACGAGCTGACCCTTGAAGGTATCAAGCAGTTTTATGTCAATGTCGATAAGGAAGAATGGAAGCTTGAGACATTATGCGACCTCTACGAGACTCTCGCCATCACTCAGAGTGTCATTTTTGTGAATACCAGGCGGAAAGTGGACTGGCTCACGGATAAGATGCGAAGCAGAGATCATACAGTCTCGGCCACTCACGGTGACATGGACCAGAACACTAGGGATATCATCATGCGAGAGTTTCGGTTTGGCTCTTCTCGAGTTCTCATAACCACCGACCTCTTGGCCCGTGGTATCGATGTGCAGCAGGTGTCTTTGGTCATAAACTATGATCTCCCAACTCAACCTGAAAACTATCTCCACCGTATAGGTCGTAGTGGGCGATTTGGAAGAAAAGGTGTTTCTATTAACTTTGTGACAATAGATGATGCTAGAATGTTGGCTGATATTCAGAAATTCTACAATGTGATTATAGAGGAGCTGCCATCAAATGTTGCTGATTTGCTCTGA
Protein sequence

>MS.gene011242.t1

MAGLAPEGSQFDANHYDSKMNELLATDGQEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDFLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQQLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRFGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTIDDARMLADIQKFYNVIIEELPSNVADLL