AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052695

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052695.t1 MTR_8g018400 98.789 413 5 0 1 413 1 413 0.0 842
MS.gene052695.t1 MTR_2g099620 94.673 413 22 0 1 413 1 413 0.0 814
MS.gene052695.t1 MTR_2g039960 92.978 413 29 0 1 413 1 413 0.0 798
MS.gene052695.t1 MTR_4g125970 91.525 413 35 0 1 413 1 413 0.0 786
MS.gene052695.t1 MTR_4g125970 91.525 413 35 0 1 413 18 430 0.0 785
MS.gene052695.t1 MTR_2g099620 95.165 393 19 0 21 413 5 397 0.0 774
MS.gene052695.t1 MTR_2g438110 64.343 373 133 0 41 413 34 406 0.0 511
MS.gene052695.t1 MTR_1g046570 62.183 394 112 5 56 413 6 398 1.74e-166 473
MS.gene052695.t1 MTR_8g018370 66.185 346 90 4 71 413 3 324 7.95e-154 438
MS.gene052695.t1 MTR_7g076820 41.033 368 213 4 40 406 149 513 2.85e-87 275
MS.gene052695.t1 MTR_7g076830 40.489 368 215 4 40 406 142 506 6.69e-86 271
MS.gene052695.t1 MTR_7g076800 40.489 368 215 4 40 406 140 504 6.91e-86 271
MS.gene052695.t1 MTR_1g012420 39.130 368 218 6 47 409 53 419 1.05e-75 242
MS.gene052695.t1 MTR_3g107420 39.946 368 215 6 47 409 53 419 1.46e-75 241
MS.gene052695.t1 MTR_4g010565 39.130 368 218 6 47 409 130 496 3.33e-73 238
MS.gene052695.t1 MTR_3g467550 35.733 375 219 5 40 396 116 486 1.88e-67 224
MS.gene052695.t1 MTR_8g018350 65.089 169 45 5 252 413 15 176 6.21e-66 208
MS.gene052695.t1 MTR_3g467550 35.598 368 215 5 47 396 92 455 1.86e-65 218
MS.gene052695.t1 MTR_2g100230 35.165 364 222 3 41 394 96 455 1.78e-63 212
MS.gene052695.t1 MTR_1g061970 34.925 398 221 12 41 405 80 472 2.98e-63 211
MS.gene052695.t1 MTR_4g049910 33.766 385 227 9 41 405 55 431 1.28e-61 206
MS.gene052695.t1 MTR_8g018330 59.524 168 57 4 252 413 15 177 7.89e-61 195
MS.gene052695.t1 MTR_4g134170 31.529 425 250 7 10 397 247 667 1.95e-60 208
MS.gene052695.t1 MTR_3g449250 34.324 370 232 5 45 406 94 460 2.09e-60 205
MS.gene052695.t1 MTR_3g449250 34.324 370 232 5 45 406 94 460 3.73e-60 205
MS.gene052695.t1 MTR_7g109720 34.072 361 231 4 41 394 232 592 4.09e-60 208
MS.gene052695.t1 MTR_0915s0010 39.437 284 168 4 54 336 2 282 9.36e-60 196
MS.gene052695.t1 MTR_5g090120 34.043 376 235 6 45 411 85 456 3.64e-59 202
MS.gene052695.t1 MTR_3g083690 33.333 390 237 6 40 407 144 532 2.78e-58 201
MS.gene052695.t1 MTR_6g082080 33.154 371 244 3 41 408 10 379 3.55e-58 196
MS.gene052695.t1 MTR_6g005320 31.981 419 245 8 15 397 213 627 6.00e-58 201
MS.gene052695.t1 MTR_7g056830 33.154 371 244 3 41 408 10 379 7.58e-58 196
MS.gene052695.t1 MTR_4g105100 34.160 363 233 3 41 397 202 564 1.42e-57 199
MS.gene052695.t1 MTR_4g079320 32.708 373 241 5 42 407 20 389 3.62e-56 197
MS.gene052695.t1 MTR_4g114120 33.163 392 233 6 42 407 141 529 1.44e-55 194
MS.gene052695.t1 MTR_3g467550 35.119 336 196 5 40 357 116 447 2.40e-55 189
MS.gene052695.t1 MTR_2g066050 33.889 360 233 2 41 395 53 412 2.84e-54 188
MS.gene052695.t1 MTR_1g054630 32.405 395 233 8 40 407 153 540 4.55e-54 189
MS.gene052695.t1 MTR_2g007000 33.594 384 239 6 41 412 504 883 6.32e-54 193
MS.gene052695.t1 MTR_1g026830 30.077 389 253 8 41 413 147 532 3.37e-53 187
MS.gene052695.t1 MTR_1g095810 30.077 389 253 8 41 413 145 530 1.85e-52 184
MS.gene052695.t1 MTR_2g032630 32.873 362 236 4 41 396 496 856 4.89e-52 187
MS.gene052695.t1 MTR_6g005550 31.316 380 250 5 41 412 165 541 3.72e-51 183
MS.gene052695.t1 MTR_3g049990 32.902 386 240 7 25 396 133 513 2.14e-50 181
MS.gene052695.t1 MTR_5g027840 33.333 369 228 6 28 384 95 457 4.22e-50 177
MS.gene052695.t1 MTR_6g033070 31.593 364 237 6 41 394 140 501 1.11e-47 171
MS.gene052695.t1 MTR_2g041140 32.115 383 244 7 27 396 124 503 2.16e-46 170
MS.gene052695.t1 MTR_6g056080 30.484 351 217 6 45 380 115 453 1.98e-40 152
MS.gene052695.t1 MTR_2g055850 30.707 368 232 12 40 391 90 450 2.17e-40 151
MS.gene052695.t1 MTR_4g112340 30.267 337 216 8 50 372 106 437 5.54e-40 150
MS.gene052695.t1 MTR_3g071620 28.846 364 231 7 47 383 22 384 1.14e-39 149
MS.gene052695.t1 MTR_2g063080 25.708 424 250 7 41 402 109 529 2.43e-39 148
MS.gene052695.t1 MTR_4g105100 32.362 309 203 3 41 343 202 510 2.79e-39 147
MS.gene052695.t1 MTR_7g100820 27.487 382 268 5 34 412 130 505 3.64e-39 149
MS.gene052695.t1 MTR_7g057250 26.637 443 235 10 39 399 161 595 1.38e-37 145
MS.gene052695.t1 MTR_8g027780 27.919 394 237 11 42 406 107 482 9.78e-37 141
MS.gene052695.t1 MTR_1g102410 28.375 363 225 5 49 380 52 410 4.12e-36 140
MS.gene052695.t1 MTR_8g027770 27.665 394 238 9 42 406 202 577 1.10e-35 139
MS.gene052695.t1 MTR_1g083130 26.650 409 245 8 41 397 26 431 1.88e-35 138
MS.gene052695.t1 MTR_8g027775 28.238 386 246 10 42 406 103 478 2.12e-35 137
MS.gene052695.t1 MTR_4g068990 29.446 343 221 11 68 395 102 438 4.49e-34 135
MS.gene052695.t1 MTR_8g097000 27.226 393 246 10 42 406 289 669 5.22e-34 134
MS.gene052695.t1 MTR_5g092560 28.261 368 239 11 68 413 102 466 3.31e-32 129
MS.gene052695.t1 MTR_6g039840 28.272 382 242 10 41 396 110 485 4.41e-32 129
MS.gene052695.t1 MTR_3g107420 41.146 192 110 3 47 235 53 244 1.99e-31 122
MS.gene052695.t1 MTR_4g112320 30.000 260 172 6 117 372 2 255 9.83e-30 119
MS.gene052695.t1 MTR_8g027780 27.353 340 208 10 42 352 107 436 1.48e-26 111
MS.gene052695.t1 MTR_5g069330 26.478 389 266 7 36 413 2 381 1.67e-26 110
MS.gene052695.t1 MTR_5g069330 26.562 384 262 7 41 413 3 377 1.90e-26 110
MS.gene052695.t1 MTR_4g131750 25.964 389 241 12 49 399 90 469 9.83e-25 106
MS.gene052695.t1 MTR_0427s0010 31.602 231 108 8 198 405 3 206 1.80e-24 100
MS.gene052695.t1 MTR_3g118120 26.434 401 241 13 24 383 120 507 5.82e-24 104
MS.gene052695.t1 MTR_6g039840 28.618 304 194 8 110 396 12 309 8.60e-24 103
MS.gene052695.t1 MTR_4g077370 37.634 186 113 1 41 223 250 435 9.13e-23 100
MS.gene052695.t1 MTR_4g077370 35.079 191 96 4 41 223 2 172 8.45e-17 82.4
MS.gene052695.t1 MTR_4g068990 30.357 224 143 6 181 395 8 227 1.46e-21 97.1
MS.gene052695.t1 MTR_5g077690 23.238 383 215 6 79 389 71 446 3.63e-21 95.9
MS.gene052695.t1 MTR_1g022305 25.294 340 182 11 63 395 26 300 4.61e-20 92.4
MS.gene052695.t1 MTR_5g092560 29.954 217 144 5 181 390 8 223 6.10e-20 92.4
MS.gene052695.t1 MTR_8g032230 37.681 138 79 2 41 174 10 144 7.21e-18 81.3
MS.gene052695.t1 MTR_4g459350 31.183 186 118 5 41 217 41 225 7.54e-18 83.6
MS.gene052695.t1 MTR_8g042690 22.111 398 284 11 24 404 1 389 1.48e-17 84.7
MS.gene052695.t1 MTR_4g059460 31.183 186 118 5 41 217 44 228 4.36e-17 83.6
MS.gene052695.t1 MTR_4g059460 36.082 97 61 1 310 406 392 487 3.99e-14 74.7
MS.gene052695.t1 MTR_2g043360 30.645 186 119 5 41 217 41 225 1.40e-16 82.0
MS.gene052695.t1 MTR_2g043360 36.082 97 61 1 310 406 389 484 8.94e-15 76.6
MS.gene052695.t1 MTR_2g043360 36.082 97 61 1 310 406 271 366 8.43e-15 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052695.t1 AT1G54270 91.304 414 33 2 1 413 1 412 0.0 780
MS.gene052695.t1 AT3G13920 91.063 414 34 2 1 413 1 412 0.0 778
MS.gene052695.t1 AT1G54270 90.097 414 33 3 1 413 1 407 0.0 763
MS.gene052695.t1 AT1G72730 87.681 414 50 1 1 413 1 414 0.0 762
MS.gene052695.t1 AT3G13920 89.855 414 34 3 1 413 1 407 0.0 761
MS.gene052695.t1 AT3G13920 93.041 388 26 1 27 413 15 402 0.0 748
MS.gene052695.t1 AT3G13920 91.094 393 32 2 1 392 1 391 0.0 736
MS.gene052695.t1 AT3G13920 91.094 393 32 2 1 392 5 395 0.0 736
MS.gene052695.t1 AT3G19760 62.725 389 138 1 25 413 27 408 1.41e-179 506
MS.gene052695.t1 AT1G51380 58.537 369 153 0 41 409 23 391 8.45e-162 461
MS.gene052695.t1 AT1G51380 58.333 252 105 0 41 292 23 274 5.26e-107 317
MS.gene052695.t1 AT3G61240 38.575 407 243 6 6 409 89 491 4.66e-88 276
MS.gene052695.t1 AT3G61240 38.575 407 243 6 6 409 89 491 4.66e-88 276
MS.gene052695.t1 AT4G00660 39.623 371 220 4 40 409 131 498 5.29e-87 273
MS.gene052695.t1 AT4G00660 39.623 371 220 4 40 409 131 498 5.29e-87 273
MS.gene052695.t1 AT2G45810 39.241 395 223 7 14 407 141 519 7.58e-86 271
MS.gene052695.t1 AT1G51380 55.924 211 93 0 41 251 23 233 1.45e-81 253
MS.gene052695.t1 AT1G51380 55.924 211 93 0 41 251 23 233 3.11e-81 252
MS.gene052695.t1 AT5G11170 37.949 390 235 7 26 409 31 419 7.72e-75 239
MS.gene052695.t1 AT5G11200 37.949 390 235 7 26 409 31 419 7.72e-75 239
MS.gene052695.t1 AT5G11170 38.872 337 200 6 78 409 1 336 5.03e-68 219
MS.gene052695.t1 AT3G53110 35.250 400 231 11 33 407 81 477 1.25e-67 223
MS.gene052695.t1 AT5G11200 34.339 431 235 8 26 409 31 460 1.48e-66 219
MS.gene052695.t1 AT5G26742 35.000 420 244 10 9 413 80 485 1.24e-64 220
MS.gene052695.t1 AT5G26742 35.000 420 244 10 9 413 80 485 1.26e-64 220
MS.gene052695.t1 AT1G55150 34.444 360 230 2 41 394 100 459 6.95e-64 213
MS.gene052695.t1 AT1G55150 34.444 360 230 2 41 394 125 484 7.99e-64 214
MS.gene052695.t1 AT5G26742 35.938 384 214 10 45 413 26 392 5.10e-63 214
MS.gene052695.t1 AT5G63120 34.908 381 236 3 42 413 167 544 5.60e-63 213
MS.gene052695.t1 AT3G22310 34.946 372 229 6 45 407 121 488 1.80e-62 212
MS.gene052695.t1 AT3G22310 34.946 372 229 6 45 407 121 488 2.38e-62 212
MS.gene052695.t1 AT2G33730 32.388 423 249 7 10 397 274 694 3.61e-62 213
MS.gene052695.t1 AT3G22330 34.677 372 230 6 45 407 109 476 1.08e-61 210
MS.gene052695.t1 AT1G77030 31.989 372 245 4 42 407 30 399 2.56e-59 207
MS.gene052695.t1 AT2G47330 33.943 383 238 6 41 412 229 607 2.51e-58 203
MS.gene052695.t1 AT3G58570 33.249 397 242 7 33 406 136 532 3.49e-57 198
MS.gene052695.t1 AT3G58510 33.681 383 228 8 43 406 160 535 3.71e-57 198
MS.gene052695.t1 AT3G58510 33.681 383 228 8 43 406 160 535 3.71e-57 198
MS.gene052695.t1 AT3G58510 33.681 383 228 8 43 406 160 535 3.71e-57 198
MS.gene052695.t1 AT5G14610 32.808 381 243 6 41 412 170 546 1.19e-56 197
MS.gene052695.t1 AT5G14610 32.808 381 243 6 41 412 162 538 1.41e-56 197
MS.gene052695.t1 AT5G14610 32.808 381 243 6 41 412 162 538 1.60e-56 197
MS.gene052695.t1 AT1G20920 33.511 376 240 5 46 412 197 571 1.99e-56 199
MS.gene052695.t1 AT5G60990 32.242 397 243 7 36 413 5 394 3.46e-56 192
MS.gene052695.t1 AT2G42520 34.000 400 234 9 33 404 149 546 5.13e-56 195
MS.gene052695.t1 AT2G42520 34.000 400 234 9 33 404 149 546 5.13e-56 195
MS.gene052695.t1 AT2G42520 34.000 400 234 9 33 404 149 546 5.13e-56 195
MS.gene052695.t1 AT3G01540 34.555 382 235 10 41 412 159 535 8.35e-56 194
MS.gene052695.t1 AT3G06480 34.197 386 235 6 39 412 434 812 8.89e-56 199
MS.gene052695.t1 AT3G01540 34.555 382 235 10 41 412 159 535 8.92e-56 194
MS.gene052695.t1 AT3G01540 34.555 382 235 10 41 412 159 535 8.92e-56 194
MS.gene052695.t1 AT3G01540 34.555 382 235 10 41 412 159 535 8.92e-56 194
MS.gene052695.t1 AT1G20920 33.773 379 235 6 46 412 535 909 5.79e-55 196
MS.gene052695.t1 AT1G20920 33.773 379 235 6 46 412 535 909 5.79e-55 196
MS.gene052695.t1 AT1G20920 33.773 379 235 6 46 412 535 909 5.79e-55 196
MS.gene052695.t1 AT1G20920 33.773 379 235 6 46 412 535 909 5.79e-55 196
MS.gene052695.t1 AT1G20920 33.773 379 235 6 46 412 535 909 5.79e-55 196
MS.gene052695.t1 AT1G20920 33.773 379 235 6 46 412 535 909 5.79e-55 196
MS.gene052695.t1 AT1G16280 32.632 380 240 5 30 396 43 419 1.01e-53 186
MS.gene052695.t1 AT5G14610 31.880 367 237 6 55 412 45 407 1.30e-52 184
MS.gene052695.t1 AT5G14610 31.880 367 237 6 55 412 45 407 1.30e-52 184
MS.gene052695.t1 AT4G16630 33.156 377 243 4 29 396 153 529 1.64e-52 187
MS.gene052695.t1 AT3G02065 32.329 365 234 5 41 394 111 473 5.20e-52 182
MS.gene052695.t1 AT3G02065 32.329 365 234 5 41 394 111 473 5.20e-52 182
MS.gene052695.t1 AT5G14610 31.579 380 247 6 42 412 231 606 1.04e-51 184
MS.gene052695.t1 AT4G33370 30.412 388 251 8 41 412 98 482 4.25e-51 180
MS.gene052695.t1 AT5G11200 30.958 449 244 10 26 409 31 478 5.42e-51 179
MS.gene052695.t1 AT5G51280 30.691 391 246 8 41 412 147 531 9.50e-51 180
MS.gene052695.t1 AT1G28180 32.402 358 219 6 63 410 5 349 1.15e-49 172
MS.gene052695.t1 AT1G31970 33.053 357 224 5 41 384 117 471 1.25e-49 176
MS.gene052695.t1 AT3G09620 32.447 376 209 8 46 409 403 745 1.85e-47 174
MS.gene052695.t1 AT3G09620 32.447 376 209 8 46 409 402 744 2.13e-47 174
MS.gene052695.t1 AT3G02065 32.827 329 208 5 77 394 10 336 2.74e-47 166
MS.gene052695.t1 AT3G18600 31.117 376 249 6 41 408 90 463 1.94e-46 168
MS.gene052695.t1 AT1G12770 27.431 401 229 6 41 381 111 509 9.38e-46 166
MS.gene052695.t1 AT1G12770 27.431 401 229 6 41 381 111 509 9.38e-46 166
MS.gene052695.t1 AT3G09720 29.058 382 262 5 34 412 138 513 4.90e-45 164
MS.gene052695.t1 AT3G09720 29.058 382 262 5 34 412 138 513 4.90e-45 164
MS.gene052695.t1 AT5G63120 34.405 311 192 3 42 343 167 474 2.09e-43 158
MS.gene052695.t1 AT5G63120 34.405 311 192 3 42 343 167 474 2.09e-43 158
MS.gene052695.t1 AT5G63120 34.405 311 192 3 42 343 167 474 2.09e-43 158
MS.gene052695.t1 AT5G63120 34.405 311 192 3 42 343 167 474 2.23e-43 158
MS.gene052695.t1 AT5G62190 31.383 376 230 9 55 411 111 477 7.31e-43 159
MS.gene052695.t1 AT5G65900 30.084 359 243 5 41 391 155 513 9.16e-43 159
MS.gene052695.t1 AT5G05450 29.888 358 226 7 50 383 26 382 7.68e-42 155
MS.gene052695.t1 AT1G71370 30.114 352 230 7 47 383 23 373 2.27e-41 154
MS.gene052695.t1 AT5G14610 31.325 332 215 6 41 363 170 497 2.23e-40 150
MS.gene052695.t1 AT3G06480 32.515 326 201 6 39 352 434 752 6.55e-39 149
MS.gene052695.t1 AT5G63630 29.167 384 245 8 42 406 56 431 7.92e-37 141
MS.gene052695.t1 AT5G08610 29.442 394 231 10 42 406 384 759 3.27e-36 141
MS.gene052695.t1 AT5G08620 28.894 398 240 9 42 412 82 463 5.27e-36 139
MS.gene052695.t1 AT5G63630 29.167 384 245 8 42 406 250 625 6.30e-36 140
MS.gene052695.t1 AT2G07750 26.799 403 254 11 35 407 368 759 2.13e-34 136
MS.gene052695.t1 AT1G63250 28.150 373 230 9 35 377 321 685 8.39e-34 134
MS.gene052695.t1 AT5G54910 28.283 396 259 13 17 396 49 435 9.98e-33 130
MS.gene052695.t1 AT4G34910 26.277 411 246 8 41 397 47 454 6.60e-32 128
MS.gene052695.t1 AT2G40700 25.280 447 252 13 41 406 31 476 4.44e-30 122
MS.gene052695.t1 AT4G09730 26.289 388 250 9 37 396 109 488 3.42e-29 120
MS.gene052695.t1 AT5G19210 27.506 389 232 13 49 399 85 461 6.09e-29 118
MS.gene052695.t1 AT1G71280 29.167 312 181 9 47 345 24 308 2.24e-28 114
MS.gene052695.t1 AT1G71280 29.167 312 181 9 47 345 24 308 1.75e-27 114
MS.gene052695.t1 AT3G06980 28.158 380 231 13 41 383 375 749 1.55e-26 112
MS.gene052695.t1 AT4G15850 25.648 386 211 13 79 394 74 453 4.04e-25 107
MS.gene052695.t1 AT3G16840 31.980 197 110 4 39 211 190 386 1.29e-18 89.0
MS.gene052695.t1 AT3G16840 31.980 197 110 4 39 211 189 385 1.36e-18 88.6
MS.gene052695.t1 AT5G19210 25.625 320 178 12 123 399 2 304 2.43e-15 77.0
MS.gene052695.t1 AT5G19210 25.625 320 178 12 123 399 2 304 2.43e-15 77.0
MS.gene052695.t1 AT1G28180 34.959 123 63 3 63 177 5 118 3.64e-11 60.8

Find 103 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGAACAATTCCCCTTTGC+TGG 0.293854 8.1:-79805165 None:intergenic
GTTGAGCTAGCTCCCTTGTT+GGG 0.301077 8.1:-79805312 None:intergenic
CTAGTAATCTCAAGGGCTTC+AGG 0.311812 8.1:-79806353 None:intergenic
TGGTGATTTCCTTGGTGTTA+AGG 0.320580 8.1:+79805360 MS.gene052695:CDS
GCATCAAATTGTGATCCTTC+TGG 0.320747 8.1:-79804342 None:intergenic
TCAGTGCCAGGCTTTGGTTT+TGG 0.326291 8.1:+79805288 MS.gene052695:CDS
ATCAAGCTGTTGCAAAATTC+CGG 0.337314 8.1:-79805254 None:intergenic
CAACAGGCTCAGTCTGGAAC+TGG 0.352918 8.1:+79805211 MS.gene052695:CDS
CGATGTGCAGCAGGTGTCTT+TGG 0.375487 8.1:+79806709 MS.gene052695:CDS
TGTTGAGCTAGCTCCCTTGT+TGG 0.388522 8.1:-79805313 None:intergenic
TGTTCCTTTCTGCAAAGGTC+TGG 0.389951 8.1:+79805180 MS.gene052695:CDS
GCAACTGCCAGGCAAAATTC+AGG 0.391968 8.1:+79806304 MS.gene052695:CDS
CTTTGATGCAATGGGGCTGC+TGG 0.392582 8.1:+79804554 MS.gene052695:CDS
TTCACGTGGTTTCAAGGATC+AGG 0.397596 8.1:+79805552 MS.gene052695:CDS
CACACTGTCGTTGGAACTCC+AGG 0.399453 8.1:+79805445 MS.gene052695:CDS
ATTAGTTCAGTGCCAGGCTT+TGG 0.399710 8.1:+79805282 MS.gene052695:CDS
CTGAAGCCCTTGAGATTACT+AGG 0.401600 8.1:+79806354 MS.gene052695:CDS
AGCAAATCAGCAACATTTGA+TGG 0.401883 8.1:-79806896 None:intergenic
TGATGATATCCCTAGTGTTC+TGG 0.402762 8.1:-79806622 None:intergenic
CGTGACGAGCTAACCCTTGA+AGG 0.407890 8.1:+79806413 MS.gene052695:CDS
CGAGCTCTTGGTGATTTCCT+TGG 0.412365 8.1:+79805352 MS.gene052695:CDS
AATGCTTTCACGTGGTTTCA+AGG 0.431053 8.1:+79805546 MS.gene052695:CDS
AAAACTGCTTGATACCTTCA+AGG 0.434126 8.1:-79806427 None:intergenic
GTGATTCAACAGGCTCAGTC+TGG 0.448350 8.1:+79805205 MS.gene052695:CDS
ATATCATCATGCGTGAGTTT+CGG 0.448555 8.1:+79806636 MS.gene052695:CDS
CTTCACAGGCTTGCCACTGA+TGG 0.452513 8.1:+79804492 MS.gene052695:intron
GAGAAGGTTATGCGAGCTCT+TGG 0.461408 8.1:+79805340 MS.gene052695:CDS
ATTGGTCGTAGTGGGCGATT+CGG 0.462471 8.1:+79806779 MS.gene052695:CDS
GCCTTCTGCAATCCAGCAAA+GGG 0.463425 8.1:+79805153 MS.gene052695:CDS
AGGTCTGGATGTGATTCAAC+AGG 0.474852 8.1:+79805195 MS.gene052695:CDS
CCCCTTTGCTGGATTGCAGA+AGG 0.475034 8.1:-79805154 None:intergenic
GAAAACTATCTCCACCGTAT+TGG 0.495070 8.1:+79806761 MS.gene052695:CDS
TATGATAGCTTTGATGCAAT+GGG 0.502817 8.1:+79804546 MS.gene052695:CDS
GACATCTTCCAGCAACTGCC+AGG 0.503674 8.1:+79806293 MS.gene052695:CDS
TCTCATAACCACCGACCTCT+TGG 0.503780 8.1:+79806676 MS.gene052695:CDS
CCGTGGTATCGATGTGCAGC+AGG 0.506103 8.1:+79806700 MS.gene052695:CDS
ATTCTACAATGTGATTATAG+AGG 0.506162 8.1:+79806868 MS.gene052695:CDS
TTATGGATTAGTTCAGTGCC+AGG 0.507436 8.1:+79805276 MS.gene052695:CDS
CTGCGAGGCATATATGCTTA+CGG 0.509659 8.1:+79804585 MS.gene052695:CDS
TTGAGCTAGCTCCCTTGTTG+GGG 0.518069 8.1:-79805311 None:intergenic
GGAATTGTTCCTTTCTGCAA+AGG 0.520763 8.1:+79805175 MS.gene052695:CDS
TATGAGAACTCGAGAAGAGC+CGG 0.524126 8.1:-79806660 None:intergenic
TCAATGTCGATAAGGAAGAA+TGG 0.524682 8.1:+79806453 MS.gene052695:CDS
AGTGGGCGATTCGGAAGAAA+AGG 0.528669 8.1:+79806788 MS.gene052695:CDS
TGTGAATACCAGGCGGAAAG+TGG 0.532599 8.1:+79806535 MS.gene052695:CDS
GTGACATGGACCAGAACACT+AGG 0.533768 8.1:+79806612 MS.gene052695:CDS
CGCTTTACGAGGATTCTCAC+TGG 0.538645 8.1:-79806392 None:intergenic
TTGCATAAAGATGTTTGTGC+TGG 0.538711 8.1:+79805510 MS.gene052695:CDS
GAGCCAGTCCACTTTCCGCC+TGG 0.540700 8.1:-79806543 None:intergenic
CTCCACCGTATTGGTCGTAG+TGG 0.543762 8.1:+79806770 MS.gene052695:CDS
CATACAGTCTCGGCCACTCA+TGG 0.544977 8.1:+79806590 MS.gene052695:CDS
CGACAGTGTGAACACCAGCT+TGG 0.545095 8.1:-79805432 None:intergenic
ATACCAGGCGGAAAGTGGAC+TGG 0.545618 8.1:+79806540 MS.gene052695:CDS
AAGGTCCATGCTTGTGTCGG+TGG 0.548362 8.1:+79805379 MS.gene052695:CDS
GGCCTTCTGCAATCCAGCAA+AGG 0.549743 8.1:+79805152 MS.gene052695:CDS
TTGGGGCCAAAACCAAAGCC+TGG 0.554251 8.1:-79805294 None:intergenic
TGAACTTCCTAGTAATCTCA+AGG 0.555172 8.1:-79806361 None:intergenic
AAGACAGCAACATTCTGCTC+CGG 0.555779 8.1:+79805235 MS.gene052695:CDS
TTCACAGGCTTGCCACTGAT+GGG 0.561668 8.1:+79804493 MS.gene052695:intron
AACAGGCTCAGTCTGGAACT+GGG 0.561973 8.1:+79805212 MS.gene052695:CDS
ATCGCCCACTACGACCAATA+CGG 0.565807 8.1:-79806775 None:intergenic
ACATCCAGACCTTTGCAGAA+AGG 0.567685 8.1:-79805184 None:intergenic
ATCATGCGTGAGTTTCGGTC+CGG 0.573408 8.1:+79806641 MS.gene052695:CDS
AACATGTCAAACACACGCCC+TGG 0.573687 8.1:-79805463 None:intergenic
CTCGGCCACTCATGGTGACA+TGG 0.586484 8.1:+79806598 MS.gene052695:CDS
AGGTCCATGCTTGTGTCGGT+GGG 0.588205 8.1:+79805380 MS.gene052695:CDS
AATAGATGATGCTAGAATGT+TGG 0.588211 8.1:+79806832 MS.gene052695:CDS
CTGCCAGGCAAAATTCAGGT+TGG 0.595132 8.1:+79806308 MS.gene052695:CDS
AAACTGCTTGATACCTTCAA+GGG 0.596650 8.1:-79806426 None:intergenic
GCGGAAAGTGGACTGGCTCA+CGG 0.597521 8.1:+79806547 MS.gene052695:CDS
TTGTCCCACCGACACAAGCA+TGG 0.598267 8.1:-79805384 None:intergenic
GAAGAATTCTTGCCCATCAG+TGG 0.598468 8.1:-79804505 None:intergenic
GATCAGCGCATTCTCCAAGC+TGG 0.599910 8.1:+79805418 MS.gene052695:CDS
GTATGATAGCTTTGATGCAA+TGG 0.599998 8.1:+79804545 MS.gene052695:CDS
CCTGCTGCACATCGATACCA+CGG 0.600509 8.1:-79806700 None:intergenic
GCTGGTGTTCACACTGTCGT+TGG 0.603283 8.1:+79805436 MS.gene052695:CDS
GATACCACGGGCCAAGAGGT+CGG 0.604438 8.1:-79806687 None:intergenic
AAGCAGAGATCATACAGTCT+CGG 0.606411 8.1:+79806580 MS.gene052695:CDS
CTGGTCCATGTCACCATGAG+TGG 0.606697 8.1:-79806603 None:intergenic
TTAGCTCGTCACGCTTTACG+AGG 0.609509 8.1:-79806403 None:intergenic
CTGCTGCACATCGATACCAC+GGG 0.609965 8.1:-79806699 None:intergenic
ACCACCGACCTCTTGGCCCG+TGG 0.610628 8.1:+79806683 MS.gene052695:CDS
ATGGCAGGTTTGGCTCCAGA+AGG 0.617096 8.1:+79804327 MS.gene052695:CDS
CATCGATACCACGGGCCAAG+AGG 0.618009 8.1:-79806691 None:intergenic
GGCGTGTGTTTGACATGTTG+CGG 0.627441 8.1:+79805467 MS.gene052695:CDS
GTTAAGGTCCATGCTTGTGT+CGG 0.630178 8.1:+79805376 MS.gene052695:CDS
TCCACCGTATTGGTCGTAGT+GGG 0.634791 8.1:+79806771 MS.gene052695:CDS
CGGTGGGACAAGTGTACGTG+AGG 0.636343 8.1:+79805396 MS.gene052695:CDS
GCCCACTACGACCAATACGG+TGG 0.644384 8.1:-79806772 None:intergenic
GTGTGTTTGACATGTTGCGG+AGG 0.646901 8.1:+79805470 MS.gene052695:CDS
GCTAGCTCAACAGATTGAGA+AGG 0.652657 8.1:+79805324 MS.gene052695:CDS
ACACTGTCGTTGGAACTCCA+GGG 0.656152 8.1:+79805446 MS.gene052695:CDS
GAACTTCCTAGTAATCTCAA+GGG 0.668909 8.1:-79806360 None:intergenic
GTAATCTCAAGGGCTTCAGG+TGG 0.671800 8.1:-79806350 None:intergenic
TGACATGGACCAGAACACTA+GGG 0.676762 8.1:+79806613 MS.gene052695:CDS
ACCACGGGCCAAGAGGTCGG+TGG 0.685004 8.1:-79806684 None:intergenic
CTGCTGGAAAATCTTCTGCG+AGG 0.693207 8.1:+79804570 MS.gene052695:CDS
ATCATACACTTCATCATACG+AGG 0.697193 8.1:-79804529 None:intergenic
AAGCATGGACCTTAACACCA+AGG 0.708929 8.1:-79805369 None:intergenic
CCTTCTGCAATCCAGCAAAG+GGG 0.710070 8.1:+79805154 MS.gene052695:CDS
GCTGATGAAATGCTTTCACG+TGG 0.720414 8.1:+79805538 MS.gene052695:CDS
TGATGGCGAGAGTCTCGTAG+AGG 0.723309 8.1:-79806496 None:intergenic
ATGATAGCTTTGATGCAATG+GGG 0.760055 8.1:+79804547 MS.gene052695:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATCTTTGTTTTAAATTT+CGG - chr8.1:79806068-79806087 None:intergenic 10.0%
!! ATAAAGTGGTTATAATTTAT+TGG + chr8.1:79804753-79804772 MS.gene052695:intron 15.0%
!! GAATGAATAAAAAAAGAAAA+AGG - chr8.1:79806146-79806165 None:intergenic 15.0%
!! TAATTACAAAACAATAAATC+TGG - chr8.1:79804846-79804865 None:intergenic 15.0%
!! CGACTAAATAAAAAAGAAAA+AGG - chr8.1:79805667-79805686 None:intergenic 20.0%
!! CTAGAAAAGAAATAATACAA+CGG + chr8.1:79804966-79804985 MS.gene052695:intron 20.0%
!! GTCAAATTACAAGAAAAAAA+AGG - chr8.1:79804458-79804477 None:intergenic 20.0%
!!! AATATTACGTTTTACTAGAA+GGG - chr8.1:79804812-79804831 None:intergenic 20.0%
!!! ATCTTTTATCTTGTTTTGAA+AGG + chr8.1:79805121-79805140 MS.gene052695:intron 20.0%
!!! GTTTTGTAATTATATTGCAA+TGG + chr8.1:79804854-79804873 MS.gene052695:intron 20.0%
!!! TAATATTACGTTTTACTAGA+AGG - chr8.1:79804813-79804832 None:intergenic 20.0%
!!! TGTATTATTTCTTTTCTAGT+CGG - chr8.1:79804965-79804984 None:intergenic 20.0%
! AACCACTTTATAATTTCAAC+AGG - chr8.1:79804744-79804763 None:intergenic 25.0%
! AAGAATAAGCACGTAAAATA+AGG - chr8.1:79804632-79804651 None:intergenic 25.0%
! AATATAAAAGACTGAAACAG+TGG - chr8.1:79805719-79805738 None:intergenic 25.0%
! ACCACTTTATAATTTCAACA+GGG - chr8.1:79804743-79804762 None:intergenic 25.0%
! AGAATAAGCACGTAAAATAA+GGG - chr8.1:79804631-79804650 None:intergenic 25.0%
! ATATAAAAGACTGAAACAGT+GGG - chr8.1:79805718-79805737 None:intergenic 25.0%
! ATGGAATTAGAAAAGTCAAA+AGG - chr8.1:79805601-79805620 None:intergenic 25.0%
! ATTCTACAATGTGATTATAG+AGG + chr8.1:79806868-79806887 MS.gene052695:CDS 25.0%
! TCAATTAGGATTTGTGTTAA+AGG + chr8.1:79805885-79805904 MS.gene052695:intron 25.0%
! TTACGTGCTTATTCTTATTA+TGG + chr8.1:79804636-79804655 MS.gene052695:intron 25.0%
! TTGAACGGAAAATTGAAAAA+AGG + chr8.1:79806010-79806029 MS.gene052695:intron 25.0%
!! TTATATTGCAATGGTAATGA+TGG + chr8.1:79804863-79804882 MS.gene052695:intron 25.0%
AATAGATGATGCTAGAATGT+TGG + chr8.1:79806832-79806851 MS.gene052695:CDS 30.0%
AATGAGTACATCTTTCATGA+AGG + chr8.1:79805030-79805049 MS.gene052695:intron 30.0%
ACAAATCCTAATTGAGAACT+CGG - chr8.1:79805880-79805899 None:intergenic 30.0%
ACCACTTTATGATTGGAAAA+TGG - chr8.1:79805776-79805795 None:intergenic 30.0%
ATGATTGGAAAATGGATGAA+AGG - chr8.1:79805768-79805787 None:intergenic 30.0%
ATTTGTGTTAAAGGAAAGCA+GGG + chr8.1:79805894-79805913 MS.gene052695:intron 30.0%
GAATAAGCACGTAAAATAAG+GGG - chr8.1:79804630-79804649 None:intergenic 30.0%
GAATTAGAAAAGTCAAAAGG+TGG - chr8.1:79805598-79805617 None:intergenic 30.0%
GTGCTTATTCTTATTATGGT+AGG + chr8.1:79804640-79804659 MS.gene052695:intron 30.0%
TATAAAAGACTGAAACAGTG+GGG - chr8.1:79805717-79805736 None:intergenic 30.0%
TCCCTGTTGAAATTATAAAG+TGG + chr8.1:79804739-79804758 MS.gene052695:intron 30.0%
TTTAGTCGAAATGTCTTATG+CGG + chr8.1:79805679-79805698 MS.gene052695:intron 30.0%
TTTCATAATGCCATGTAAGA+TGG - chr8.1:79806248-79806267 None:intergenic 30.0%
! ATGATTTTGTATGCGCTAAA+AGG - chr8.1:79805965-79805984 None:intergenic 30.0%
! ATTTTGCAACAGCTTGATTA+TGG + chr8.1:79805259-79805278 MS.gene052695:CDS 30.0%
! GGCATTATGAAAACTTTTGT+TGG + chr8.1:79806256-79806275 MS.gene052695:intron 30.0%
! GTGCATGTTTTCAAAGATAA+AGG + chr8.1:79806041-79806060 MS.gene052695:intron 30.0%
! GTTTTATGTCAATGTCGATA+AGG + chr8.1:79806445-79806464 MS.gene052695:CDS 30.0%
! TATCTTTGAAAACATGCACA+AGG - chr8.1:79806040-79806059 None:intergenic 30.0%
! TCCATTTTCCAATCATAAAG+TGG + chr8.1:79805772-79805791 MS.gene052695:intron 30.0%
! TTGCTGCAGTTTTTGTATTT+TGG + chr8.1:79804913-79804932 MS.gene052695:intron 30.0%
!! AAGATTTACACTCTAGAATC+TGG + chr8.1:79804672-79804691 MS.gene052695:intron 30.0%
!! TATGATAGCTTTGATGCAAT+GGG + chr8.1:79804546-79804565 MS.gene052695:CDS 30.0%
!!! TTGTTTTGAAAGGTTTTGAG+AGG + chr8.1:79805131-79805150 MS.gene052695:intron 30.0%
AAAAATGACACTCTGAGTGA+TGG - chr8.1:79806516-79806535 None:intergenic 35.0%
AAAACTGCTTGATACCTTCA+AGG - chr8.1:79806430-79806449 None:intergenic 35.0%
AAACTGCTTGATACCTTCAA+GGG - chr8.1:79806429-79806448 None:intergenic 35.0%
ACAAATCAGGAGAGATTAAG+GGG + chr8.1:79805932-79805951 MS.gene052695:intron 35.0%
ACGACACTGTTTACAAACAA+TGG - chr8.1:79805620-79805639 None:intergenic 35.0%
AGCAAATCAGCAACATTTGA+TGG - chr8.1:79806899-79806918 None:intergenic 35.0%
ATAAAAGACTGAAACAGTGG+GGG - chr8.1:79805716-79805735 None:intergenic 35.0%
ATATCATCATGCGTGAGTTT+CGG + chr8.1:79806636-79806655 MS.gene052695:CDS 35.0%
ATCAAGCTGTTGCAAAATTC+CGG - chr8.1:79805257-79805276 None:intergenic 35.0%
ATCATACACTTCATCATACG+AGG - chr8.1:79804532-79804551 None:intergenic 35.0%
ATTGTTTGTAAACAGTGTCG+TGG + chr8.1:79805619-79805638 MS.gene052695:intron 35.0%
CAATTTCCGAGTTCTCAATT+AGG + chr8.1:79805871-79805890 MS.gene052695:intron 35.0%
CACAAATCAGGAGAGATTAA+GGG + chr8.1:79805931-79805950 MS.gene052695:intron 35.0%
CATAAACGTTTAGCTAGACA+TGG - chr8.1:79806223-79806242 None:intergenic 35.0%
CATTGCTACCACTTTATGAT+TGG - chr8.1:79805783-79805802 None:intergenic 35.0%
CGTTTATGTTCCATCTTACA+TGG + chr8.1:79806235-79806254 MS.gene052695:intron 35.0%
CTAATTGAGAACTCGGAAAT+TGG - chr8.1:79805873-79805892 None:intergenic 35.0%
GAACTTCCTAGTAATCTCAA+GGG - chr8.1:79806363-79806382 None:intergenic 35.0%
GATGTGAGTTATATATCCCA+CGG + chr8.1:79805831-79805850 MS.gene052695:intron 35.0%
GATTTGTGTTAAAGGAAAGC+AGG + chr8.1:79805893-79805912 MS.gene052695:intron 35.0%
GTCTTGTACATTAACTTCAC+AGG + chr8.1:79804478-79804497 MS.gene052695:intron 35.0%
TATATGCTTACGGTATGTAC+TGG + chr8.1:79804595-79804614 MS.gene052695:intron 35.0%
TCAATGTCGATAAGGAAGAA+TGG + chr8.1:79806453-79806472 MS.gene052695:CDS 35.0%
TCACAAATCAGGAGAGATTA+AGG + chr8.1:79805930-79805949 MS.gene052695:intron 35.0%
TGAACTTCCTAGTAATCTCA+AGG - chr8.1:79806364-79806383 None:intergenic 35.0%
TTGCATAAAGATGTTTGTGC+TGG + chr8.1:79805510-79805529 MS.gene052695:CDS 35.0%
TTTGTGTTAAAGGAAAGCAG+GGG + chr8.1:79805895-79805914 MS.gene052695:intron 35.0%
! CCATGTCAATGGTTTTTGAA+CGG + chr8.1:79805995-79806014 MS.gene052695:intron 35.0%
! GAAGGCATATATCACAAATC+AGG + chr8.1:79805919-79805938 MS.gene052695:intron 35.0%
! TTTTGAACATGCACAACACA+AGG + chr8.1:79805738-79805757 MS.gene052695:intron 35.0%
!! ATGATAGCTTTGATGCAATG+GGG + chr8.1:79804547-79804566 MS.gene052695:CDS 35.0%
!! GTATGATAGCTTTGATGCAA+TGG + chr8.1:79804545-79804564 MS.gene052695:CDS 35.0%
!! TCATTTTTGTGAATACCAGG+CGG + chr8.1:79806528-79806547 MS.gene052695:CDS 35.0%
!! TTACACTCTAGAATCTGGAT+TGG + chr8.1:79804677-79804696 MS.gene052695:intron 35.0%
!!! AGATAGTTTTCAGGTTGAGT+TGG - chr8.1:79806752-79806771 None:intergenic 35.0%
!!! GATAGTTTTCAGGTTGAGTT+GGG - chr8.1:79806751-79806770 None:intergenic 35.0%
!!! GTGTCATTTTTGTGAATACC+AGG + chr8.1:79806525-79806544 MS.gene052695:CDS 35.0%
AAGCAGAGATCATACAGTCT+CGG + chr8.1:79806580-79806599 MS.gene052695:CDS 40.0%
AATGCTTTCACGTGGTTTCA+AGG + chr8.1:79805546-79805565 MS.gene052695:CDS 40.0%
ATTGAGAACTCGGAAATTGG+AGG - chr8.1:79805870-79805889 None:intergenic 40.0%
CCGTTCAAAAACCATTGACA+TGG - chr8.1:79805998-79806017 None:intergenic 40.0%
GAAAACTATCTCCACCGTAT+TGG + chr8.1:79806761-79806780 MS.gene052695:CDS 40.0%
GCATCAAATTGTGATCCTTC+TGG - chr8.1:79804345-79804364 None:intergenic 40.0%
GGAATTGTTCCTTTCTGCAA+AGG + chr8.1:79805175-79805194 MS.gene052695:CDS 40.0%
TGATGATATCCCTAGTGTTC+TGG - chr8.1:79806625-79806644 None:intergenic 40.0%
TGGTAGCAATGTCTGTTACA+TGG + chr8.1:79805792-79805811 MS.gene052695:intron 40.0%
TTGAGAACTCGGAAATTGGA+GGG - chr8.1:79805869-79805888 None:intergenic 40.0%
! ATACGGTGGAGATAGTTTTC+AGG - chr8.1:79806761-79806780 None:intergenic 40.0%
!! TGGTGATTTCCTTGGTGTTA+AGG + chr8.1:79805360-79805379 MS.gene052695:CDS 40.0%
!! TTATGGATTAGTTCAGTGCC+AGG + chr8.1:79805276-79805295 MS.gene052695:CDS 40.0%
AAGACAGCAACATTCTGCTC+CGG + chr8.1:79805235-79805254 MS.gene052695:CDS 45.0%
AAGCATGGACCTTAACACCA+AGG - chr8.1:79805372-79805391 None:intergenic 45.0%
AAGGAACAATTCCCCTTTGC+TGG - chr8.1:79805168-79805187 None:intergenic 45.0%
ACATCCAGACCTTTGCAGAA+AGG - chr8.1:79805187-79805206 None:intergenic 45.0%
ACCATTGACATGGCGACTAA+TGG - chr8.1:79805988-79806007 None:intergenic 45.0%
AGGTCTGGATGTGATTCAAC+AGG + chr8.1:79805195-79805214 MS.gene052695:CDS 45.0%
ATTAGTTCAGTGCCAGGCTT+TGG + chr8.1:79805282-79805301 MS.gene052695:CDS 45.0%
CTAGTAATCTCAAGGGCTTC+AGG - chr8.1:79806356-79806375 None:intergenic 45.0%
CTGAAGCCCTTGAGATTACT+AGG + chr8.1:79806354-79806373 MS.gene052695:CDS 45.0%
CTGCGAGGCATATATGCTTA+CGG + chr8.1:79804585-79804604 MS.gene052695:CDS 45.0%
GAAGAATTCTTGCCCATCAG+TGG - chr8.1:79804508-79804527 None:intergenic 45.0%
GCTAGCTCAACAGATTGAGA+AGG + chr8.1:79805324-79805343 MS.gene052695:CDS 45.0%
GCTGATGAAATGCTTTCACG+TGG + chr8.1:79805538-79805557 MS.gene052695:CDS 45.0%
GTTAAGGTCCATGCTTGTGT+CGG + chr8.1:79805376-79805395 MS.gene052695:CDS 45.0%
TAAACAGTGTCGTGGCAGTT+TGG + chr8.1:79805627-79805646 MS.gene052695:intron 45.0%
TATGAGAACTCGAGAAGAGC+CGG - chr8.1:79806663-79806682 None:intergenic 45.0%
TCCATTAGTCGCCATGTCAA+TGG + chr8.1:79805984-79806003 MS.gene052695:intron 45.0%
TGACATGGACCAGAACACTA+GGG + chr8.1:79806613-79806632 MS.gene052695:CDS 45.0%
TGTTCCTTTCTGCAAAGGTC+TGG + chr8.1:79805180-79805199 MS.gene052695:CDS 45.0%
TTAAAGGAAAGCAGGGGAGA+AGG + chr8.1:79805901-79805920 MS.gene052695:intron 45.0%
TTCACGTGGTTTCAAGGATC+AGG + chr8.1:79805552-79805571 MS.gene052695:CDS 45.0%
! ACTCCAACCTGAATTTTGCC+TGG - chr8.1:79806314-79806333 None:intergenic 45.0%
!!! TTTGGTTTTGGCCCCAACAA+GGG + chr8.1:79805300-79805319 MS.gene052695:CDS 45.0%
AACATGTCAAACACACGCCC+TGG - chr8.1:79805466-79805485 None:intergenic 50.0%
ACACTGTCGTTGGAACTCCA+GGG + chr8.1:79805446-79805465 MS.gene052695:CDS 50.0%
AGGGAAATACAAGTCGCCGT+GGG - chr8.1:79805850-79805869 None:intergenic 50.0%
ATCATGCGTGAGTTTCGGTC+CGG + chr8.1:79806641-79806660 MS.gene052695:CDS 50.0%
ATCGCCCACTACGACCAATA+CGG - chr8.1:79806778-79806797 None:intergenic 50.0%
CCTTCTGCAATCCAGCAAAG+GGG + chr8.1:79805154-79805173 MS.gene052695:CDS 50.0%
CGCTTTACGAGGATTCTCAC+TGG - chr8.1:79806395-79806414 None:intergenic 50.0%
CTGCCAGGCAAAATTCAGGT+TGG + chr8.1:79806308-79806327 MS.gene052695:CDS 50.0%
CTGCTGGAAAATCTTCTGCG+AGG + chr8.1:79804570-79804589 MS.gene052695:CDS 50.0%
GAGAAGGTTATGCGAGCTCT+TGG + chr8.1:79805340-79805359 MS.gene052695:CDS 50.0%
GCAACTGCCAGGCAAAATTC+AGG + chr8.1:79806304-79806323 MS.gene052695:CDS 50.0%
GCCTTCTGCAATCCAGCAAA+GGG + chr8.1:79805153-79805172 MS.gene052695:CDS 50.0%
GGCGTGTGTTTGACATGTTG+CGG + chr8.1:79805467-79805486 MS.gene052695:CDS 50.0%
GTAATCTCAAGGGCTTCAGG+TGG - chr8.1:79806353-79806372 None:intergenic 50.0%
GTGACATGGACCAGAACACT+AGG + chr8.1:79806612-79806631 MS.gene052695:CDS 50.0%
GTGATTCAACAGGCTCAGTC+TGG + chr8.1:79805205-79805224 MS.gene052695:CDS 50.0%
GTGTGTTTGACATGTTGCGG+AGG + chr8.1:79805470-79805489 MS.gene052695:CDS 50.0%
GTTGAGCTAGCTCCCTTGTT+GGG - chr8.1:79805315-79805334 None:intergenic 50.0%
TCTCATAACCACCGACCTCT+TGG + chr8.1:79806676-79806695 MS.gene052695:CDS 50.0%
TGTGAATACCAGGCGGAAAG+TGG + chr8.1:79806535-79806554 MS.gene052695:CDS 50.0%
TGTTGAGCTAGCTCCCTTGT+TGG - chr8.1:79805316-79805335 None:intergenic 50.0%
TTAGCTCGTCACGCTTTACG+AGG - chr8.1:79806406-79806425 None:intergenic 50.0%
TTCACAGGCTTGCCACTGAT+GGG + chr8.1:79804493-79804512 MS.gene052695:intron 50.0%
TTGAGCTAGCTCCCTTGTTG+GGG - chr8.1:79805314-79805333 None:intergenic 50.0%
! AACAGGCTCAGTCTGGAACT+GGG + chr8.1:79805212-79805231 MS.gene052695:CDS 50.0%
! AGTGGGCGATTCGGAAGAAA+AGG + chr8.1:79806788-79806807 MS.gene052695:CDS 50.0%
! CGAGCTCTTGGTGATTTCCT+TGG + chr8.1:79805352-79805371 MS.gene052695:CDS 50.0%
! GAATTTTGCCTGGCAGTTGC+TGG - chr8.1:79806304-79806323 None:intergenic 50.0%
! TCCACCGTATTGGTCGTAGT+GGG + chr8.1:79806771-79806790 MS.gene052695:CDS 50.0%
!! ATTGGTCGTAGTGGGCGATT+CGG + chr8.1:79806779-79806798 MS.gene052695:CDS 50.0%
!! TCAGTGCCAGGCTTTGGTTT+TGG + chr8.1:79805288-79805307 MS.gene052695:CDS 50.0%
!!! CTTTGGTTTTGGCCCCAACA+AGG + chr8.1:79805299-79805318 MS.gene052695:CDS 50.0%
AAGGTCCATGCTTGTGTCGG+TGG + chr8.1:79805379-79805398 MS.gene052695:CDS 55.0%
ATACCAGGCGGAAAGTGGAC+TGG + chr8.1:79806540-79806559 MS.gene052695:CDS 55.0%
CACACTGTCGTTGGAACTCC+AGG + chr8.1:79805445-79805464 MS.gene052695:CDS 55.0%
CATACAGTCTCGGCCACTCA+TGG + chr8.1:79806590-79806609 MS.gene052695:CDS 55.0%
CCCCTTTGCTGGATTGCAGA+AGG - chr8.1:79805157-79805176 None:intergenic 55.0%
CCTGCTGCACATCGATACCA+CGG - chr8.1:79806703-79806722 None:intergenic 55.0%
CGACAGTGTGAACACCAGCT+TGG - chr8.1:79805435-79805454 None:intergenic 55.0%
CGATGTGCAGCAGGTGTCTT+TGG + chr8.1:79806709-79806728 MS.gene052695:CDS 55.0%
CGTGACGAGCTAACCCTTGA+AGG + chr8.1:79806413-79806432 MS.gene052695:CDS 55.0%
CTGCTGCACATCGATACCAC+GGG - chr8.1:79806702-79806721 None:intergenic 55.0%
CTGGTCCATGTCACCATGAG+TGG - chr8.1:79806606-79806625 None:intergenic 55.0%
CTTCACAGGCTTGCCACTGA+TGG + chr8.1:79804492-79804511 MS.gene052695:intron 55.0%
CTTTGATGCAATGGGGCTGC+TGG + chr8.1:79804554-79804573 MS.gene052695:CDS 55.0%
GACATCTTCCAGCAACTGCC+AGG + chr8.1:79806293-79806312 MS.gene052695:CDS 55.0%
GAGGGAAATACAAGTCGCCG+TGG - chr8.1:79805851-79805870 None:intergenic 55.0%
GATCAGCGCATTCTCCAAGC+TGG + chr8.1:79805418-79805437 MS.gene052695:CDS 55.0%
GCTGGTGTTCACACTGTCGT+TGG + chr8.1:79805436-79805455 MS.gene052695:CDS 55.0%
GGCCTTCTGCAATCCAGCAA+AGG + chr8.1:79805152-79805171 MS.gene052695:CDS 55.0%
TTGGGGCCAAAACCAAAGCC+TGG - chr8.1:79805297-79805316 None:intergenic 55.0%
TTGTCCCACCGACACAAGCA+TGG - chr8.1:79805387-79805406 None:intergenic 55.0%
! AGGTCCATGCTTGTGTCGGT+GGG + chr8.1:79805380-79805399 MS.gene052695:CDS 55.0%
! ATGGCAGGTTTGGCTCCAGA+AGG + chr8.1:79804327-79804346 MS.gene052695:CDS 55.0%
! CAACAGGCTCAGTCTGGAAC+TGG + chr8.1:79805211-79805230 MS.gene052695:CDS 55.0%
! CTCCACCGTATTGGTCGTAG+TGG + chr8.1:79806770-79806789 MS.gene052695:CDS 55.0%
! TGATGGCGAGAGTCTCGTAG+AGG - chr8.1:79806499-79806518 None:intergenic 55.0%
CATCGATACCACGGGCCAAG+AGG - chr8.1:79806694-79806713 None:intergenic 60.0%
CGGTGGGACAAGTGTACGTG+AGG + chr8.1:79805396-79805415 MS.gene052695:CDS 60.0%
CTCGGCCACTCATGGTGACA+TGG + chr8.1:79806598-79806617 MS.gene052695:CDS 60.0%
GATACCACGGGCCAAGAGGT+CGG - chr8.1:79806690-79806709 None:intergenic 60.0%
GCCCACTACGACCAATACGG+TGG - chr8.1:79806775-79806794 None:intergenic 60.0%
!! CCGTGGTATCGATGTGCAGC+AGG + chr8.1:79806700-79806719 MS.gene052695:CDS 60.0%
!! GCGGAAAGTGGACTGGCTCA+CGG + chr8.1:79806547-79806566 MS.gene052695:CDS 60.0%
GAGCCAGTCCACTTTCCGCC+TGG - chr8.1:79806546-79806565 None:intergenic 65.0%
ACCACCGACCTCTTGGCCCG+TGG + chr8.1:79806683-79806702 MS.gene052695:CDS 70.0%
ACCACGGGCCAAGAGGTCGG+TGG - chr8.1:79806687-79806706 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 79804327 79806922 79804327 ID=MS.gene052695
chr8.1 mRNA 79804327 79806922 79804327 ID=MS.gene052695.t1;Parent=MS.gene052695
chr8.1 exon 79804327 79804394 79804327 ID=MS.gene052695.t1.exon1;Parent=MS.gene052695.t1
chr8.1 CDS 79804327 79804394 79804327 ID=cds.MS.gene052695.t1;Parent=MS.gene052695.t1
chr8.1 exon 79804500 79804606 79804500 ID=MS.gene052695.t1.exon2;Parent=MS.gene052695.t1
chr8.1 CDS 79804500 79804606 79804500 ID=cds.MS.gene052695.t1;Parent=MS.gene052695.t1
chr8.1 exon 79805143 79805573 79805143 ID=MS.gene052695.t1.exon3;Parent=MS.gene052695.t1
chr8.1 CDS 79805143 79805573 79805143 ID=cds.MS.gene052695.t1;Parent=MS.gene052695.t1
chr8.1 exon 79806287 79806922 79806287 ID=MS.gene052695.t1.exon4;Parent=MS.gene052695.t1
chr8.1 CDS 79806287 79806922 79806287 ID=cds.MS.gene052695.t1;Parent=MS.gene052695.t1
Gene Sequence

>MS.gene052695

ATGGCAGGTTTGGCTCCAGAAGGATCACAATTTGATGCTAATCATTATGACTCTAAGATGAATGAACTGTTTGTTTCTGTGCTTCATATTCTTCACTGTTAATTATGATTGAATTTGTTATTCATGTACCTTTTTTTTCTTGTAATTTGACGTCTTGTACATTAACTTCACAGGCTTGCCACTGATGGGCAAGAATTCTTCACCTCGTATGATGAAGTGTATGATAGCTTTGATGCAATGGGGCTGCTGGAAAATCTTCTGCGAGGCATATATGCTTACGGTATGTACTGGAAAATTGATCCCCTTATTTTACGTGCTTATTCTTATTATGGTAGGTCAGTAAGCAAGATTTACACTCTAGAATCTGGATTGGATCTAATGTGTTTTGAATTTTGATATATTTGATCTATTCTCCCTGTTGAAATTATAAAGTGGTTATAATTTATTGGTGCAATCAACTCTTCAAGATCTTTAATACTAATCCCTTCTAGTAAAACGTAATATTATTATTTTGTTCCAGATTTATTGTTTTGTAATTATATTGCAATGGTAATGATGGACATCAACAATTTTCATTTTTTGCATATTGCTGCAGTTTTTGTATTTTGGATATAATTGTGTTTCAAAATTATTTACCGACTAGAAAAGAAATAATACAACGGACAAATGTGATTGAATCAAATAATTTTCTAAATTTTTTAAAAATGAGTACATCTTTCATGAAGGCATCAATAATATATATGTTAAAAAATAAATGTTACTATTGCTACAGTTATCATGAAATCATGTGTGTCATCTTTTATCTTGTTTTGAAAGGTTTTGAGAGGCCTTCTGCAATCCAGCAAAGGGGAATTGTTCCTTTCTGCAAAGGTCTGGATGTGATTCAACAGGCTCAGTCTGGAACTGGGAAGACAGCAACATTCTGCTCCGGAATTTTGCAACAGCTTGATTATGGATTAGTTCAGTGCCAGGCTTTGGTTTTGGCCCCAACAAGGGAGCTAGCTCAACAGATTGAGAAGGTTATGCGAGCTCTTGGTGATTTCCTTGGTGTTAAGGTCCATGCTTGTGTCGGTGGGACAAGTGTACGTGAGGATCAGCGCATTCTCCAAGCTGGTGTTCACACTGTCGTTGGAACTCCAGGGCGTGTGTTTGACATGTTGCGGAGGCAATCTCTACGCTCAGATTGCATAAAGATGTTTGTGCTGGATGAAGCTGATGAAATGCTTTCACGTGGTTTCAAGGATCAGGTTCGTCAATATGCTCATTTTCCACCTTTTGACTTTTCTAATTCCATTGTTTGTAAACAGTGTCGTGGCAGTTTGGTGAAGCATGAGTTTCCTTTTTCTTTTTTATTTAGTCGAAATGTCTTATGCGGTTCTTTATCTTCCCCCACTGTTTCAGTCTTTTATATTTTTGAACATGCACAACACAAGGTTTTCCTTTCATCCATTTTCCAATCATAAAGTGGTAGCAATGTCTGTTACATGGACGAAGCAGCTGTAACGATGTGAGTTATATATCCCACGGCGACTTGTATTTCCCTCCAATTTCCGAGTTCTCAATTAGGATTTGTGTTAAAGGAAAGCAGGGGAGAAGGCATATATCACAAATCAGGAGAGATTAAGGGGCTATTATCCTTTTAGCGCATACAAAATCATCCATTAGTCGCCATGTCAATGGTTTTTGAACGGAAAATTGAAAAAAGGAAAACCTTGTGCATGTTTTCAAAGATAAAGGACCGAAATTTAAAACAAAGATAAAAAAGACTAATTTGTTACAAAAAAAATAAAAGATATAGAAACACACGATTAGTTTTCCTTTTTCTTTTTTTATTCATTCATTTATTTATAAAATGCAAAAGAAGTGAGCTTTACTAACTGAATCTTAATGCAGCCATGTCTAGCTAAACGTTTATGTTCCATCTTACATGGCATTATGAAAACTTTTGTTGGTGTTGCAGATCTATGACATCTTCCAGCAACTGCCAGGCAAAATTCAGGTTGGAGTATTTTCTGCTACAATGCCACCTGAAGCCCTTGAGATTACTAGGAAGTTCATGAATAAGCCAGTGAGAATCCTCGTAAAGCGTGACGAGCTAACCCTTGAAGGTATCAAGCAGTTTTATGTCAATGTCGATAAGGAAGAATGGAAGCTTGAGACATTGTGCGACCTCTACGAGACTCTCGCCATCACTCAGAGTGTCATTTTTGTGAATACCAGGCGGAAAGTGGACTGGCTCACGGATAAGATGCGAAGCAGAGATCATACAGTCTCGGCCACTCATGGTGACATGGACCAGAACACTAGGGATATCATCATGCGTGAGTTTCGGTCCGGCTCTTCTCGAGTTCTCATAACCACCGACCTCTTGGCCCGTGGTATCGATGTGCAGCAGGTGTCTTTGGTCATAAACTATGATCTCCCAACTCAACCTGAAAACTATCTCCACCGTATTGGTCGTAGTGGGCGATTCGGAAGAAAAGGTGTTTCTATTAACTTTGTGACAATAGATGATGCTAGAATGTTGGCTGATATTCAGAAATTCTACAATGTGATTATAGAGGAGCTGCCATCAAATGTTGCTGATTTGCTCTGA
Protein sequence

>MS.gene052695.t1

MAGLAPEGSQFDANHYDSKMNELLATDGQEFFTSYDEVYDSFDAMGLLENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDFLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQQLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTIDDARMLADIQKFYNVIIEELPSNVADLL