AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene37366

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37366.t1 MTR_8g018400 98.789 413 5 0 1 413 1 413 0.0 842
MS.gene37366.t1 MTR_2g099620 94.673 413 22 0 1 413 1 413 0.0 814
MS.gene37366.t1 MTR_2g039960 92.978 413 29 0 1 413 1 413 0.0 798
MS.gene37366.t1 MTR_4g125970 91.525 413 35 0 1 413 1 413 0.0 786
MS.gene37366.t1 MTR_4g125970 91.525 413 35 0 1 413 18 430 0.0 785
MS.gene37366.t1 MTR_2g099620 95.165 393 19 0 21 413 5 397 0.0 774
MS.gene37366.t1 MTR_2g438110 64.343 373 133 0 41 413 34 406 0.0 511
MS.gene37366.t1 MTR_1g046570 62.183 394 112 5 56 413 6 398 1.74e-166 473
MS.gene37366.t1 MTR_8g018370 66.185 346 90 4 71 413 3 324 7.95e-154 438
MS.gene37366.t1 MTR_7g076820 41.033 368 213 4 40 406 149 513 2.85e-87 275
MS.gene37366.t1 MTR_7g076830 40.489 368 215 4 40 406 142 506 6.69e-86 271
MS.gene37366.t1 MTR_7g076800 40.489 368 215 4 40 406 140 504 6.91e-86 271
MS.gene37366.t1 MTR_1g012420 39.130 368 218 6 47 409 53 419 1.05e-75 242
MS.gene37366.t1 MTR_3g107420 39.946 368 215 6 47 409 53 419 1.46e-75 241
MS.gene37366.t1 MTR_4g010565 39.130 368 218 6 47 409 130 496 3.33e-73 238
MS.gene37366.t1 MTR_3g467550 35.733 375 219 5 40 396 116 486 1.88e-67 224
MS.gene37366.t1 MTR_8g018350 65.089 169 45 5 252 413 15 176 6.21e-66 208
MS.gene37366.t1 MTR_3g467550 35.598 368 215 5 47 396 92 455 1.86e-65 218
MS.gene37366.t1 MTR_2g100230 35.165 364 222 3 41 394 96 455 1.78e-63 212
MS.gene37366.t1 MTR_1g061970 34.925 398 221 12 41 405 80 472 2.98e-63 211
MS.gene37366.t1 MTR_4g049910 33.766 385 227 9 41 405 55 431 1.28e-61 206
MS.gene37366.t1 MTR_8g018330 59.524 168 57 4 252 413 15 177 7.89e-61 195
MS.gene37366.t1 MTR_4g134170 31.529 425 250 7 10 397 247 667 1.95e-60 208
MS.gene37366.t1 MTR_3g449250 34.324 370 232 5 45 406 94 460 2.09e-60 205
MS.gene37366.t1 MTR_3g449250 34.324 370 232 5 45 406 94 460 3.73e-60 205
MS.gene37366.t1 MTR_7g109720 34.072 361 231 4 41 394 232 592 4.09e-60 208
MS.gene37366.t1 MTR_0915s0010 39.437 284 168 4 54 336 2 282 9.36e-60 196
MS.gene37366.t1 MTR_5g090120 34.043 376 235 6 45 411 85 456 3.64e-59 202
MS.gene37366.t1 MTR_3g083690 33.333 390 237 6 40 407 144 532 2.78e-58 201
MS.gene37366.t1 MTR_6g082080 33.154 371 244 3 41 408 10 379 3.55e-58 196
MS.gene37366.t1 MTR_6g005320 31.981 419 245 8 15 397 213 627 6.00e-58 201
MS.gene37366.t1 MTR_7g056830 33.154 371 244 3 41 408 10 379 7.58e-58 196
MS.gene37366.t1 MTR_4g105100 34.160 363 233 3 41 397 202 564 1.42e-57 199
MS.gene37366.t1 MTR_4g079320 32.708 373 241 5 42 407 20 389 3.62e-56 197
MS.gene37366.t1 MTR_4g114120 33.163 392 233 6 42 407 141 529 1.44e-55 194
MS.gene37366.t1 MTR_3g467550 35.119 336 196 5 40 357 116 447 2.40e-55 189
MS.gene37366.t1 MTR_2g066050 33.889 360 233 2 41 395 53 412 2.84e-54 188
MS.gene37366.t1 MTR_1g054630 32.405 395 233 8 40 407 153 540 4.55e-54 189
MS.gene37366.t1 MTR_2g007000 33.594 384 239 6 41 412 504 883 6.32e-54 193
MS.gene37366.t1 MTR_1g026830 30.077 389 253 8 41 413 147 532 3.37e-53 187
MS.gene37366.t1 MTR_1g095810 30.077 389 253 8 41 413 145 530 1.85e-52 184
MS.gene37366.t1 MTR_2g032630 32.873 362 236 4 41 396 496 856 4.89e-52 187
MS.gene37366.t1 MTR_6g005550 31.316 380 250 5 41 412 165 541 3.72e-51 183
MS.gene37366.t1 MTR_3g049990 32.902 386 240 7 25 396 133 513 2.14e-50 181
MS.gene37366.t1 MTR_5g027840 33.333 369 228 6 28 384 95 457 4.22e-50 177
MS.gene37366.t1 MTR_6g033070 31.593 364 237 6 41 394 140 501 1.11e-47 171
MS.gene37366.t1 MTR_2g041140 32.115 383 244 7 27 396 124 503 2.16e-46 170
MS.gene37366.t1 MTR_6g056080 30.484 351 217 6 45 380 115 453 1.98e-40 152
MS.gene37366.t1 MTR_2g055850 30.707 368 232 12 40 391 90 450 2.17e-40 151
MS.gene37366.t1 MTR_4g112340 30.267 337 216 8 50 372 106 437 5.54e-40 150
MS.gene37366.t1 MTR_3g071620 28.846 364 231 7 47 383 22 384 1.14e-39 149
MS.gene37366.t1 MTR_2g063080 25.708 424 250 7 41 402 109 529 2.43e-39 148
MS.gene37366.t1 MTR_4g105100 32.362 309 203 3 41 343 202 510 2.79e-39 147
MS.gene37366.t1 MTR_7g100820 27.487 382 268 5 34 412 130 505 3.64e-39 149
MS.gene37366.t1 MTR_7g057250 26.637 443 235 10 39 399 161 595 1.38e-37 145
MS.gene37366.t1 MTR_8g027780 27.919 394 237 11 42 406 107 482 9.78e-37 141
MS.gene37366.t1 MTR_1g102410 28.375 363 225 5 49 380 52 410 4.12e-36 140
MS.gene37366.t1 MTR_8g027770 27.665 394 238 9 42 406 202 577 1.10e-35 139
MS.gene37366.t1 MTR_1g083130 26.650 409 245 8 41 397 26 431 1.88e-35 138
MS.gene37366.t1 MTR_8g027775 28.238 386 246 10 42 406 103 478 2.12e-35 137
MS.gene37366.t1 MTR_4g068990 29.446 343 221 11 68 395 102 438 4.49e-34 135
MS.gene37366.t1 MTR_8g097000 27.226 393 246 10 42 406 289 669 5.22e-34 134
MS.gene37366.t1 MTR_5g092560 28.261 368 239 11 68 413 102 466 3.31e-32 129
MS.gene37366.t1 MTR_6g039840 28.272 382 242 10 41 396 110 485 4.41e-32 129
MS.gene37366.t1 MTR_3g107420 41.146 192 110 3 47 235 53 244 1.99e-31 122
MS.gene37366.t1 MTR_4g112320 30.000 260 172 6 117 372 2 255 9.83e-30 119
MS.gene37366.t1 MTR_8g027780 27.353 340 208 10 42 352 107 436 1.48e-26 111
MS.gene37366.t1 MTR_5g069330 26.478 389 266 7 36 413 2 381 1.67e-26 110
MS.gene37366.t1 MTR_5g069330 26.562 384 262 7 41 413 3 377 1.90e-26 110
MS.gene37366.t1 MTR_4g131750 25.964 389 241 12 49 399 90 469 9.83e-25 106
MS.gene37366.t1 MTR_0427s0010 31.602 231 108 8 198 405 3 206 1.80e-24 100
MS.gene37366.t1 MTR_3g118120 26.434 401 241 13 24 383 120 507 5.82e-24 104
MS.gene37366.t1 MTR_6g039840 28.618 304 194 8 110 396 12 309 8.60e-24 103
MS.gene37366.t1 MTR_4g077370 37.634 186 113 1 41 223 250 435 9.13e-23 100
MS.gene37366.t1 MTR_4g077370 35.079 191 96 4 41 223 2 172 8.45e-17 82.4
MS.gene37366.t1 MTR_4g068990 30.357 224 143 6 181 395 8 227 1.46e-21 97.1
MS.gene37366.t1 MTR_5g077690 23.238 383 215 6 79 389 71 446 3.63e-21 95.9
MS.gene37366.t1 MTR_1g022305 25.294 340 182 11 63 395 26 300 4.61e-20 92.4
MS.gene37366.t1 MTR_5g092560 29.954 217 144 5 181 390 8 223 6.10e-20 92.4
MS.gene37366.t1 MTR_8g032230 37.681 138 79 2 41 174 10 144 7.21e-18 81.3
MS.gene37366.t1 MTR_4g459350 31.183 186 118 5 41 217 41 225 7.54e-18 83.6
MS.gene37366.t1 MTR_8g042690 22.111 398 284 11 24 404 1 389 1.48e-17 84.7
MS.gene37366.t1 MTR_4g059460 31.183 186 118 5 41 217 44 228 4.36e-17 83.6
MS.gene37366.t1 MTR_4g059460 36.082 97 61 1 310 406 392 487 3.99e-14 74.7
MS.gene37366.t1 MTR_2g043360 30.645 186 119 5 41 217 41 225 1.40e-16 82.0
MS.gene37366.t1 MTR_2g043360 36.082 97 61 1 310 406 389 484 8.94e-15 76.6
MS.gene37366.t1 MTR_2g043360 36.082 97 61 1 310 406 271 366 8.43e-15 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37366.t1 AT1G54270 91.304 414 33 2 1 413 1 412 0.0 780
MS.gene37366.t1 AT3G13920 91.063 414 34 2 1 413 1 412 0.0 778
MS.gene37366.t1 AT1G54270 90.097 414 33 3 1 413 1 407 0.0 763
MS.gene37366.t1 AT1G72730 87.681 414 50 1 1 413 1 414 0.0 762
MS.gene37366.t1 AT3G13920 89.855 414 34 3 1 413 1 407 0.0 761
MS.gene37366.t1 AT3G13920 93.041 388 26 1 27 413 15 402 0.0 748
MS.gene37366.t1 AT3G13920 91.094 393 32 2 1 392 1 391 0.0 736
MS.gene37366.t1 AT3G13920 91.094 393 32 2 1 392 5 395 0.0 736
MS.gene37366.t1 AT3G19760 62.725 389 138 1 25 413 27 408 1.41e-179 506
MS.gene37366.t1 AT1G51380 58.537 369 153 0 41 409 23 391 8.45e-162 461
MS.gene37366.t1 AT1G51380 58.333 252 105 0 41 292 23 274 5.26e-107 317
MS.gene37366.t1 AT3G61240 38.575 407 243 6 6 409 89 491 4.66e-88 276
MS.gene37366.t1 AT3G61240 38.575 407 243 6 6 409 89 491 4.66e-88 276
MS.gene37366.t1 AT4G00660 39.623 371 220 4 40 409 131 498 5.29e-87 273
MS.gene37366.t1 AT4G00660 39.623 371 220 4 40 409 131 498 5.29e-87 273
MS.gene37366.t1 AT2G45810 39.241 395 223 7 14 407 141 519 7.58e-86 271
MS.gene37366.t1 AT1G51380 55.924 211 93 0 41 251 23 233 1.45e-81 253
MS.gene37366.t1 AT1G51380 55.924 211 93 0 41 251 23 233 3.11e-81 252
MS.gene37366.t1 AT5G11170 37.949 390 235 7 26 409 31 419 7.72e-75 239
MS.gene37366.t1 AT5G11200 37.949 390 235 7 26 409 31 419 7.72e-75 239
MS.gene37366.t1 AT5G11170 38.872 337 200 6 78 409 1 336 5.03e-68 219
MS.gene37366.t1 AT3G53110 35.250 400 231 11 33 407 81 477 1.25e-67 223
MS.gene37366.t1 AT5G11200 34.339 431 235 8 26 409 31 460 1.48e-66 219
MS.gene37366.t1 AT5G26742 35.000 420 244 10 9 413 80 485 1.24e-64 220
MS.gene37366.t1 AT5G26742 35.000 420 244 10 9 413 80 485 1.26e-64 220
MS.gene37366.t1 AT1G55150 34.444 360 230 2 41 394 100 459 6.95e-64 213
MS.gene37366.t1 AT1G55150 34.444 360 230 2 41 394 125 484 7.99e-64 214
MS.gene37366.t1 AT5G26742 35.938 384 214 10 45 413 26 392 5.10e-63 214
MS.gene37366.t1 AT5G63120 34.908 381 236 3 42 413 167 544 5.60e-63 213
MS.gene37366.t1 AT3G22310 34.946 372 229 6 45 407 121 488 1.80e-62 212
MS.gene37366.t1 AT3G22310 34.946 372 229 6 45 407 121 488 2.38e-62 212
MS.gene37366.t1 AT2G33730 32.388 423 249 7 10 397 274 694 3.61e-62 213
MS.gene37366.t1 AT3G22330 34.677 372 230 6 45 407 109 476 1.08e-61 210
MS.gene37366.t1 AT1G77030 31.989 372 245 4 42 407 30 399 2.56e-59 207
MS.gene37366.t1 AT2G47330 33.943 383 238 6 41 412 229 607 2.51e-58 203
MS.gene37366.t1 AT3G58570 33.249 397 242 7 33 406 136 532 3.49e-57 198
MS.gene37366.t1 AT3G58510 33.681 383 228 8 43 406 160 535 3.71e-57 198
MS.gene37366.t1 AT3G58510 33.681 383 228 8 43 406 160 535 3.71e-57 198
MS.gene37366.t1 AT3G58510 33.681 383 228 8 43 406 160 535 3.71e-57 198
MS.gene37366.t1 AT5G14610 32.808 381 243 6 41 412 170 546 1.19e-56 197
MS.gene37366.t1 AT5G14610 32.808 381 243 6 41 412 162 538 1.41e-56 197
MS.gene37366.t1 AT5G14610 32.808 381 243 6 41 412 162 538 1.60e-56 197
MS.gene37366.t1 AT1G20920 33.511 376 240 5 46 412 197 571 1.99e-56 199
MS.gene37366.t1 AT5G60990 32.242 397 243 7 36 413 5 394 3.46e-56 192
MS.gene37366.t1 AT2G42520 34.000 400 234 9 33 404 149 546 5.13e-56 195
MS.gene37366.t1 AT2G42520 34.000 400 234 9 33 404 149 546 5.13e-56 195
MS.gene37366.t1 AT2G42520 34.000 400 234 9 33 404 149 546 5.13e-56 195
MS.gene37366.t1 AT3G01540 34.555 382 235 10 41 412 159 535 8.35e-56 194
MS.gene37366.t1 AT3G06480 34.197 386 235 6 39 412 434 812 8.89e-56 199
MS.gene37366.t1 AT3G01540 34.555 382 235 10 41 412 159 535 8.92e-56 194
MS.gene37366.t1 AT3G01540 34.555 382 235 10 41 412 159 535 8.92e-56 194
MS.gene37366.t1 AT3G01540 34.555 382 235 10 41 412 159 535 8.92e-56 194
MS.gene37366.t1 AT1G20920 33.773 379 235 6 46 412 535 909 5.79e-55 196
MS.gene37366.t1 AT1G20920 33.773 379 235 6 46 412 535 909 5.79e-55 196
MS.gene37366.t1 AT1G20920 33.773 379 235 6 46 412 535 909 5.79e-55 196
MS.gene37366.t1 AT1G20920 33.773 379 235 6 46 412 535 909 5.79e-55 196
MS.gene37366.t1 AT1G20920 33.773 379 235 6 46 412 535 909 5.79e-55 196
MS.gene37366.t1 AT1G20920 33.773 379 235 6 46 412 535 909 5.79e-55 196
MS.gene37366.t1 AT1G16280 32.632 380 240 5 30 396 43 419 1.01e-53 186
MS.gene37366.t1 AT5G14610 31.880 367 237 6 55 412 45 407 1.30e-52 184
MS.gene37366.t1 AT5G14610 31.880 367 237 6 55 412 45 407 1.30e-52 184
MS.gene37366.t1 AT4G16630 33.156 377 243 4 29 396 153 529 1.64e-52 187
MS.gene37366.t1 AT3G02065 32.329 365 234 5 41 394 111 473 5.20e-52 182
MS.gene37366.t1 AT3G02065 32.329 365 234 5 41 394 111 473 5.20e-52 182
MS.gene37366.t1 AT5G14610 31.579 380 247 6 42 412 231 606 1.04e-51 184
MS.gene37366.t1 AT4G33370 30.412 388 251 8 41 412 98 482 4.25e-51 180
MS.gene37366.t1 AT5G11200 30.958 449 244 10 26 409 31 478 5.42e-51 179
MS.gene37366.t1 AT5G51280 30.691 391 246 8 41 412 147 531 9.50e-51 180
MS.gene37366.t1 AT1G28180 32.402 358 219 6 63 410 5 349 1.15e-49 172
MS.gene37366.t1 AT1G31970 33.053 357 224 5 41 384 117 471 1.25e-49 176
MS.gene37366.t1 AT3G09620 32.447 376 209 8 46 409 403 745 1.85e-47 174
MS.gene37366.t1 AT3G09620 32.447 376 209 8 46 409 402 744 2.13e-47 174
MS.gene37366.t1 AT3G02065 32.827 329 208 5 77 394 10 336 2.74e-47 166
MS.gene37366.t1 AT3G18600 31.117 376 249 6 41 408 90 463 1.94e-46 168
MS.gene37366.t1 AT1G12770 27.431 401 229 6 41 381 111 509 9.38e-46 166
MS.gene37366.t1 AT1G12770 27.431 401 229 6 41 381 111 509 9.38e-46 166
MS.gene37366.t1 AT3G09720 29.058 382 262 5 34 412 138 513 4.90e-45 164
MS.gene37366.t1 AT3G09720 29.058 382 262 5 34 412 138 513 4.90e-45 164
MS.gene37366.t1 AT5G63120 34.405 311 192 3 42 343 167 474 2.09e-43 158
MS.gene37366.t1 AT5G63120 34.405 311 192 3 42 343 167 474 2.09e-43 158
MS.gene37366.t1 AT5G63120 34.405 311 192 3 42 343 167 474 2.09e-43 158
MS.gene37366.t1 AT5G63120 34.405 311 192 3 42 343 167 474 2.23e-43 158
MS.gene37366.t1 AT5G62190 31.383 376 230 9 55 411 111 477 7.31e-43 159
MS.gene37366.t1 AT5G65900 30.084 359 243 5 41 391 155 513 9.16e-43 159
MS.gene37366.t1 AT5G05450 29.888 358 226 7 50 383 26 382 7.68e-42 155
MS.gene37366.t1 AT1G71370 30.114 352 230 7 47 383 23 373 2.27e-41 154
MS.gene37366.t1 AT5G14610 31.325 332 215 6 41 363 170 497 2.23e-40 150
MS.gene37366.t1 AT3G06480 32.515 326 201 6 39 352 434 752 6.55e-39 149
MS.gene37366.t1 AT5G63630 29.167 384 245 8 42 406 56 431 7.92e-37 141
MS.gene37366.t1 AT5G08610 29.442 394 231 10 42 406 384 759 3.27e-36 141
MS.gene37366.t1 AT5G08620 28.894 398 240 9 42 412 82 463 5.27e-36 139
MS.gene37366.t1 AT5G63630 29.167 384 245 8 42 406 250 625 6.30e-36 140
MS.gene37366.t1 AT2G07750 26.799 403 254 11 35 407 368 759 2.13e-34 136
MS.gene37366.t1 AT1G63250 28.150 373 230 9 35 377 321 685 8.39e-34 134
MS.gene37366.t1 AT5G54910 28.283 396 259 13 17 396 49 435 9.98e-33 130
MS.gene37366.t1 AT4G34910 26.277 411 246 8 41 397 47 454 6.60e-32 128
MS.gene37366.t1 AT2G40700 25.280 447 252 13 41 406 31 476 4.44e-30 122
MS.gene37366.t1 AT4G09730 26.289 388 250 9 37 396 109 488 3.42e-29 120
MS.gene37366.t1 AT5G19210 27.506 389 232 13 49 399 85 461 6.09e-29 118
MS.gene37366.t1 AT1G71280 29.167 312 181 9 47 345 24 308 2.24e-28 114
MS.gene37366.t1 AT1G71280 29.167 312 181 9 47 345 24 308 1.75e-27 114
MS.gene37366.t1 AT3G06980 28.158 380 231 13 41 383 375 749 1.55e-26 112
MS.gene37366.t1 AT4G15850 25.648 386 211 13 79 394 74 453 4.04e-25 107
MS.gene37366.t1 AT3G16840 31.980 197 110 4 39 211 190 386 1.29e-18 89.0
MS.gene37366.t1 AT3G16840 31.980 197 110 4 39 211 189 385 1.36e-18 88.6
MS.gene37366.t1 AT5G19210 25.625 320 178 12 123 399 2 304 2.43e-15 77.0
MS.gene37366.t1 AT5G19210 25.625 320 178 12 123 399 2 304 2.43e-15 77.0
MS.gene37366.t1 AT1G28180 34.959 123 63 3 63 177 5 118 3.64e-11 60.8

Find 103 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCGAGCACTTGGTGATTTCC+TGG 0.285082 8.4:-74631784 MS.gene37366:CDS
GTTGAGCTAGCTCCCTTGTT+GGG 0.301077 8.4:+74631823 None:intergenic
CTAGTAATCTCAAGGGCTTC+AGG 0.311812 8.4:+74630758 None:intergenic
TCAGTGCCAGGCCTTGGTTT+TGG 0.316764 8.4:-74631847 MS.gene37366:CDS
GCATCAAATTGTGATCCTTC+TGG 0.320747 8.4:+74632780 None:intergenic
AAGGAACAATTCCCCTTTGC+TGG 0.322871 8.4:+74631970 None:intergenic
TTGCATAAAGATGTTTGTTC+TGG 0.341471 8.4:-74631625 MS.gene37366:CDS
CAACAGGCTCAGTCTGGAAC+TGG 0.352918 8.4:-74631924 MS.gene37366:CDS
TGGTGATTTCCTGGGTGTTA+AGG 0.370414 8.4:-74631775 MS.gene37366:CDS
CGTGACGAGCTGACCCTTGA+AGG 0.374139 8.4:-74630698 MS.gene37366:CDS
CGATGTGCAGCAGGTGTCTT+TGG 0.375487 8.4:-74630402 MS.gene37366:CDS
TGTTCCTTTCTGCAAAGGTC+TGG 0.389951 8.4:-74631955 MS.gene37366:CDS
GCAACTGCCAGGCAAAATTC+AGG 0.391968 8.4:-74630807 MS.gene37366:CDS
CTTTGATGCAATGGGGCTGC+TGG 0.392582 8.4:-74632568 MS.gene37366:CDS
TGTTGAGCTAGCTCCCTTGT+TGG 0.396681 8.4:+74631822 None:intergenic
TTCACGTGGTTTCAAGGATC+AGG 0.397596 8.4:-74631583 MS.gene37366:intron
CACACTGTCGTTGGAACTCC+AGG 0.399453 8.4:-74631690 MS.gene37366:CDS
CTGAAGCCCTTGAGATTACT+AGG 0.401600 8.4:-74630757 MS.gene37366:CDS
AGCAAATCAGCAACATTTGA+TGG 0.401883 8.4:+74630215 None:intergenic
TGATGATATCCCTAGTGTTC+TGG 0.402762 8.4:+74630489 None:intergenic
ATTAGTTCAGTGCCAGGCCT+TGG 0.405157 8.4:-74631853 MS.gene37366:CDS
AAAATTGCTTGATACCTTCA+AGG 0.420605 8.4:+74630684 None:intergenic
AATGCTTTCACGTGGTTTCA+AGG 0.431053 8.4:-74631589 MS.gene37366:CDS
TATGATAGCTTTGATGCAAT+GGG 0.435993 8.4:-74632576 MS.gene37366:CDS
GTGATTCAACAGGCTCAGTC+TGG 0.448350 8.4:-74631930 MS.gene37366:CDS
ATATCATCATGCGTGAGTTT+CGG 0.448555 8.4:-74630475 MS.gene37366:CDS
CTTCACAGGCTTGCCACTGA+TGG 0.452513 8.4:-74632630 MS.gene37366:intron
ATTGGTCGTAGTGGGCGATT+CGG 0.462471 8.4:-74630332 MS.gene37366:CDS
AGGTCTGGATGTGATTCAAC+AGG 0.474852 8.4:-74631940 MS.gene37366:CDS
GCCTTCTGCGATCCAGCAAA+GGG 0.477334 8.4:-74631982 MS.gene37366:CDS
AAGGTCCATGCTTGTGTTGG+TGG 0.489722 8.4:-74631756 MS.gene37366:CDS
GAAAACTATCTCCACCGTAT+TGG 0.495070 8.4:-74630350 MS.gene37366:CDS
AAGACAGCAACATTCTGCTC+TGG 0.497997 8.4:-74631900 MS.gene37366:CDS
TCTCATAACCACCGACCTCT+TGG 0.503780 8.4:-74630435 MS.gene37366:CDS
CCGTGGTATCGATGTGCAGC+AGG 0.506103 8.4:-74630411 MS.gene37366:CDS
ATTCTACAATGTGATTATAG+AGG 0.506162 8.4:-74630243 MS.gene37366:CDS
GAGAAGGTTATGCGAGCACT+TGG 0.508066 8.4:-74631795 MS.gene37366:CDS
CTGCGAGGCATATATGCTTA+CGG 0.509659 8.4:-74632537 MS.gene37366:intron
TTATGGATTAGTTCAGTGCC+AGG 0.515771 8.4:-74631859 MS.gene37366:CDS
CCCCTTTGCTGGATCGCAGA+AGG 0.518165 8.4:+74631981 None:intergenic
TTGAGCTAGCTCCCTTGTTG+GGG 0.518225 8.4:+74631824 None:intergenic
GGAATTGTTCCTTTCTGCAA+AGG 0.520763 8.4:-74631960 MS.gene37366:CDS
TATGAGAACTCGAGAAGAGC+CGG 0.524126 8.4:+74630451 None:intergenic
TCAACGTCGATAAGGAAGAA+TGG 0.527838 8.4:-74630658 MS.gene37366:CDS
AGTGGGCGATTCGGAAGAAA+AGG 0.528669 8.4:-74630323 MS.gene37366:CDS
GTTAAGGTCCATGCTTGTGT+TGG 0.529918 8.4:-74631759 MS.gene37366:CDS
TTGGGGCCAAAACCAAGGCC+TGG 0.530111 8.4:+74631841 None:intergenic
TGTGAATACCAGGCGGAAAG+TGG 0.532599 8.4:-74630576 MS.gene37366:CDS
GTGACATGGACCAGAACACT+AGG 0.533768 8.4:-74630499 MS.gene37366:CDS
GGCCTTCTGCGATCCAGCAA+AGG 0.537117 8.4:-74631983 MS.gene37366:CDS
ATATGATAGCTTTGATGCAA+TGG 0.538319 8.4:-74632577 MS.gene37366:CDS
CGCTTTACGAGGATTCTCAC+TGG 0.538645 8.4:+74630719 None:intergenic
GAGCCAGTCCACTTTCCGCC+TGG 0.540700 8.4:+74630568 None:intergenic
CTCCACCGTATTGGTCGTAG+TGG 0.543762 8.4:-74630341 MS.gene37366:CDS
CATACAGTCTCGGCCACTCA+TGG 0.544977 8.4:-74630521 MS.gene37366:CDS
CGACAGTGTGAACACCAGCT+TGG 0.545095 8.4:+74631703 None:intergenic
ATACCAGGCGGAAAGTGGAC+TGG 0.545618 8.4:-74630571 MS.gene37366:CDS
CGAGCACTTGGTGATTTCCT+GGG 0.547351 8.4:-74631783 MS.gene37366:CDS
AGGTCCATGCTTGTGTTGGT+GGG 0.553229 8.4:-74631755 MS.gene37366:CDS
TGAACTTCCTAGTAATCTCA+AGG 0.555172 8.4:+74630750 None:intergenic
TTCACAGGCTTGCCACTGAT+GGG 0.561668 8.4:-74632629 MS.gene37366:intron
AACAGGCTCAGTCTGGAACT+GGG 0.561973 8.4:-74631923 MS.gene37366:CDS
ATCGCCCACTACGACCAATA+CGG 0.565807 8.4:+74630336 None:intergenic
ACATCCAGACCTTTGCAGAA+AGG 0.567685 8.4:+74631951 None:intergenic
ATCATGCGTGAGTTTCGGTC+CGG 0.573408 8.4:-74630470 MS.gene37366:CDS
AACATGTCAAACACACGCCC+TGG 0.573687 8.4:+74631672 None:intergenic
CTCGGCCACTCATGGTGACA+TGG 0.586484 8.4:-74630513 MS.gene37366:CDS
AATAGATGATGCTAGAATGT+TGG 0.588211 8.4:-74630279 MS.gene37366:CDS
CTGCCAGGCAAAATTCAGGT+TGG 0.595132 8.4:-74630803 MS.gene37366:CDS
CCTTGTTGGGGCCAAAACCA+AGG 0.596913 8.4:+74631836 None:intergenic
AAATTGCTTGATACCTTCAA+GGG 0.597265 8.4:+74630685 None:intergenic
GCGGAAAGTGGACTGGCTCA+CGG 0.597521 8.4:-74630564 MS.gene37366:CDS
GAAGAATTCTTGCCCATCAG+TGG 0.598468 8.4:+74632617 None:intergenic
TTGTCCCACCAACACAAGCA+TGG 0.598938 8.4:+74631751 None:intergenic
GATCAGCGCATTCTCCAAGC+TGG 0.599910 8.4:-74631717 MS.gene37366:CDS
CCTGCTGCACATCGATACCA+CGG 0.600509 8.4:+74630411 None:intergenic
GCTGGTGTTCACACTGTCGT+TGG 0.603283 8.4:-74631699 MS.gene37366:CDS
GATACCACGGGCCAAGAGGT+CGG 0.604438 8.4:+74630424 None:intergenic
AAGCAGAGATCATACAGTCT+CGG 0.606411 8.4:-74630531 MS.gene37366:CDS
CTGGTCCATGTCACCATGAG+TGG 0.606697 8.4:+74630508 None:intergenic
CTGCTGCACATCGATACCAC+GGG 0.609965 8.4:+74630412 None:intergenic
ACCACCGACCTCTTGGCCCG+TGG 0.610628 8.4:-74630428 MS.gene37366:CDS
ATGGCAGGTTTGGCTCCAGA+AGG 0.617096 8.4:-74632795 MS.gene37366:CDS
CATCGATACCACGGGCCAAG+AGG 0.618009 8.4:+74630420 None:intergenic
GGCGTGTGTTTGACATGTTG+CGG 0.627441 8.4:-74631668 MS.gene37366:CDS
TCCACCGTATTGGTCGTAGT+GGG 0.634791 8.4:-74630340 MS.gene37366:CDS
GCTAGCTCAACAAATTGAGA+AGG 0.636496 8.4:-74631811 MS.gene37366:CDS
GCCCACTACGACCAATACGG+TGG 0.644384 8.4:+74630339 None:intergenic
GTGTGTTTGACATGTTGCGG+AGG 0.646901 8.4:-74631665 MS.gene37366:CDS
ACACTGTCGTTGGAACTCCA+GGG 0.656152 8.4:-74631689 MS.gene37366:CDS
TCAGCTCGTCACGCTTTACG+AGG 0.661195 8.4:+74630708 None:intergenic
GAACTTCCTAGTAATCTCAA+GGG 0.668909 8.4:+74630751 None:intergenic
GTAATCTCAAGGGCTTCAGG+TGG 0.671800 8.4:+74630761 None:intergenic
TGACATGGACCAGAACACTA+GGG 0.676762 8.4:-74630498 MS.gene37366:CDS
TGGTGGGACAAGTGTTCGTG+AGG 0.680915 8.4:-74631739 MS.gene37366:CDS
ACCACGGGCCAAGAGGTCGG+TGG 0.685004 8.4:+74630427 None:intergenic
AAGCATGGACCTTAACACCC+AGG 0.689849 8.4:+74631766 None:intergenic
CTGCTGGAAAATCTTCTGCG+AGG 0.693207 8.4:-74632552 MS.gene37366:CDS
ATCATATACTTCATCATACG+AGG 0.700751 8.4:+74632593 None:intergenic
TGATGGCAAGAGTCTCGTAG+AGG 0.710662 8.4:+74630615 None:intergenic
CCTTCTGCGATCCAGCAAAG+GGG 0.714817 8.4:-74631981 MS.gene37366:CDS
GCTGATGAAATGCTTTCACG+TGG 0.720414 8.4:-74631597 MS.gene37366:CDS
ATGATAGCTTTGATGCAATG+GGG 0.761244 8.4:-74632575 MS.gene37366:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAAAAAAAATAAGACAT+AGG - chr8.4:74631998-74632017 MS.gene37366:intron 10.0%
!!! TTATTGTTTTGTAATTAAAT+TGG - chr8.4:74630739-74630758 MS.gene37366:CDS 10.0%
!!! TTCTTCTTTGTTTTAAATTT+CGG + chr8.4:74631962-74631981 None:intergenic 15.0%
!! AAAAGAGAAAAATAATCATG+CGG + chr8.4:74632025-74632044 None:intergenic 20.0%
!! GTCAAATTACAAGAAAAAAA+AGG + chr8.4:74630342-74630361 None:intergenic 20.0%
!! TATATATTTAAACATGCACA+AGG - chr8.4:74631630-74631649 MS.gene37366:CDS 20.0%
!! TGTGTTTCAAAATTATTTAC+CGG - chr8.4:74630800-74630819 MS.gene37366:CDS 20.0%
!!! GTTTTGTAATTAAATTGGAA+TGG - chr8.4:74630744-74630763 MS.gene37366:CDS 20.0%
! AAGAATAAGCACGTAAAATA+AGG + chr8.4:74630516-74630535 None:intergenic 25.0%
! AAGCACTTTATAATTTGAAC+AGG + chr8.4:74630628-74630647 None:intergenic 25.0%
! ACCACATTATGAATGAAAAA+TGG + chr8.4:74631668-74631687 None:intergenic 25.0%
! AGAATAAGCACGTAAAATAA+GGG + chr8.4:74630515-74630534 None:intergenic 25.0%
! AGCACTTTATAATTTGAACA+GGG + chr8.4:74630627-74630646 None:intergenic 25.0%
! ATATAAAAGACTCAAACAGA+GGG + chr8.4:74631615-74631634 None:intergenic 25.0%
! ATGAATGAAAAATGGATGAA+AGG + chr8.4:74631660-74631679 None:intergenic 25.0%
! ATGGAATTAGTTAAGTCAAA+AGG + chr8.4:74631472-74631491 None:intergenic 25.0%
! ATTCTACAATGTGATTATAG+AGG - chr8.4:74632763-74632782 MS.gene37366:CDS 25.0%
! TAAAACGTAATATGTTGTTC+TGG - chr8.4:74630714-74630733 MS.gene37366:CDS 25.0%
! TATATAAAAGACTCAAACAG+AGG + chr8.4:74631616-74631635 None:intergenic 25.0%
! TTACGTGCTTATTCTTATTA+TGG - chr8.4:74630520-74630539 MS.gene37366:CDS 25.0%
! TTGAATGGAAAATTGGAAAA+AGG - chr8.4:74631904-74631923 MS.gene37366:CDS 25.0%
!! ACATATTACGTTTTACTAGA+AGG + chr8.4:74630709-74630728 None:intergenic 25.0%
!! ATGGTTTTTGAATGGAAAAT+TGG - chr8.4:74631897-74631916 MS.gene37366:CDS 25.0%
!! TGCATGTTTTCAAAGATAAA+GGG - chr8.4:74631936-74631955 MS.gene37366:CDS 25.0%
!!! ATGTTTTACCTTGTTTTGAA+AGG - chr8.4:74630992-74631011 MS.gene37366:intron 25.0%
!!! TCCATTTTTCATTCATAATG+TGG - chr8.4:74631664-74631683 MS.gene37366:CDS 25.0%
AAAATTGCTTGATACCTTCA+AGG + chr8.4:74632325-74632344 None:intergenic 30.0%
AAATTGCTTGATACCTTCAA+GGG + chr8.4:74632324-74632343 None:intergenic 30.0%
AATAGATGATGCTAGAATGT+TGG - chr8.4:74632727-74632746 MS.gene37366:intron 30.0%
AGTTTATGTTCCATCTTACA+TGG - chr8.4:74632130-74632149 MS.gene37366:intron 30.0%
ATCATATACTTCATCATACG+AGG + chr8.4:74630416-74630435 None:intergenic 30.0%
CTGGAAGAGAAATGATAAAA+TGG - chr8.4:74630823-74630842 MS.gene37366:CDS 30.0%
GAATAAGCACGTAAAATAAG+GGG + chr8.4:74630514-74630533 None:intergenic 30.0%
GAATTAGTTAAGTCAAAAGG+TGG + chr8.4:74631469-74631488 None:intergenic 30.0%
GTGCTTATTCTTATTATGGT+AGG - chr8.4:74630524-74630543 MS.gene37366:CDS 30.0%
TATAAAAGACTCAAACAGAG+GGG + chr8.4:74631614-74631633 None:intergenic 30.0%
TCTCAAAACCTTTCAAAACA+AGG + chr8.4:74631003-74631022 None:intergenic 30.0%
TTGCATAAAGATGTTTGTTC+TGG - chr8.4:74631381-74631400 MS.gene37366:intron 30.0%
TTTAGTAAGAATGTCTCATG+CGG - chr8.4:74631576-74631595 MS.gene37366:intron 30.0%
TTTCAAAATTATTTACCGGC+TGG - chr8.4:74630804-74630823 MS.gene37366:CDS 30.0%
TTTCATAATGCCATGTAAGA+TGG + chr8.4:74632143-74632162 None:intergenic 30.0%
! ATTTTATGTCAACGTCGATA+AGG - chr8.4:74632340-74632359 MS.gene37366:intron 30.0%
! GGCATTATGAAAACTTTTGT+TGG - chr8.4:74632151-74632170 MS.gene37366:intron 30.0%
! GTGATTTTGTAAGCACTAAT+AGG + chr8.4:74631859-74631878 None:intergenic 30.0%
! GTGCATGTTTTCAAAGATAA+AGG - chr8.4:74631935-74631954 MS.gene37366:CDS 30.0%
! TATCTTTGAAAACATGCACA+CGG + chr8.4:74631934-74631953 None:intergenic 30.0%
! TCAATTAGGACTAGTGTTAA+AGG - chr8.4:74631779-74631798 MS.gene37366:CDS 30.0%
!! AAGATTTACACTCTAGAATC+TGG - chr8.4:74630556-74630575 MS.gene37366:CDS 30.0%
!! ATATGATAGCTTTGATGCAA+TGG - chr8.4:74630429-74630448 MS.gene37366:CDS 30.0%
!! TATGATAGCTTTGATGCAAT+GGG - chr8.4:74630430-74630449 MS.gene37366:CDS 30.0%
!!! TTGTTTTGAAAGGTTTTGAG+AGG - chr8.4:74631002-74631021 MS.gene37366:intron 30.0%
AAAAATGACACTCTGAGTGA+TGG + chr8.4:74632411-74632430 None:intergenic 35.0%
AATGAGTGCATCTTTCATGA+AGG - chr8.4:74630895-74630914 MS.gene37366:intron 35.0%
ACAAATCAGGAGAGATTAAG+GGG - chr8.4:74631826-74631845 MS.gene37366:CDS 35.0%
ACGTAAGTTATATATCCCAC+GGG - chr8.4:74631726-74631745 MS.gene37366:CDS 35.0%
ACTAGTCCTAATTGAGAACT+CGG + chr8.4:74631774-74631793 None:intergenic 35.0%
ACTAGTGTTAAAGGAAAGCA+TGG - chr8.4:74631788-74631807 MS.gene37366:CDS 35.0%
AGCAAATCAGCAACATTTGA+TGG + chr8.4:74632794-74632813 None:intergenic 35.0%
ATAAAAGACTCAAACAGAGG+GGG + chr8.4:74631613-74631632 None:intergenic 35.0%
ATATCATCATGCGTGAGTTT+CGG - chr8.4:74632531-74632550 MS.gene37366:intron 35.0%
CAATTTCCGAGTTCTCAATT+AGG - chr8.4:74631765-74631784 MS.gene37366:CDS 35.0%
CACAAATCAGGAGAGATTAA+GGG - chr8.4:74631825-74631844 MS.gene37366:CDS 35.0%
CATAAACTTTCAGCTAGACA+TGG + chr8.4:74632118-74632137 None:intergenic 35.0%
CCATTCAAAAACCATTGACA+TGG + chr8.4:74631892-74631911 None:intergenic 35.0%
CTAATTGAGAACTCGGAAAT+TGG + chr8.4:74631767-74631786 None:intergenic 35.0%
CTTACAAAATCACCCATTAG+TGG - chr8.4:74631866-74631885 MS.gene37366:CDS 35.0%
GAACTTCCTAGTAATCTCAA+GGG + chr8.4:74632258-74632277 None:intergenic 35.0%
GACACTGTGTTTACAAACAA+TGG + chr8.4:74631491-74631510 None:intergenic 35.0%
GACGTAAGTTATATATCCCA+CGG - chr8.4:74631725-74631744 MS.gene37366:CDS 35.0%
GTCTTGTACATTAACTTCAC+AGG - chr8.4:74630362-74630381 MS.gene37366:CDS 35.0%
TATATGCTTACGGTATGTAC+TGG - chr8.4:74630479-74630498 MS.gene37366:CDS 35.0%
TCACAAATCAGGAGAGATTA+AGG - chr8.4:74631824-74631843 MS.gene37366:CDS 35.0%
TGAACTTCCTAGTAATCTCA+AGG + chr8.4:74632259-74632278 None:intergenic 35.0%
TTCATGATAACTGTAGCAAC+TGG + chr8.4:74630960-74630979 None:intergenic 35.0%
TTTATCATTTCTCTTCCAGC+CGG + chr8.4:74630822-74630841 None:intergenic 35.0%
! ATTTTGCAGCAGCTTGATTA+TGG - chr8.4:74631130-74631149 MS.gene37366:intron 35.0%
! CCATGTCAATGGTTTTTGAA+TGG - chr8.4:74631889-74631908 MS.gene37366:CDS 35.0%
! CTAGTGTTAAAGGAAAGCAT+GGG - chr8.4:74631789-74631808 MS.gene37366:CDS 35.0%
! GAAGGCATAAATCACAAATC+AGG - chr8.4:74631813-74631832 MS.gene37366:CDS 35.0%
!! ATGATAGCTTTGATGCAATG+GGG - chr8.4:74630431-74630450 MS.gene37366:CDS 35.0%
!! TCATTTTTGTGAATACCAGG+CGG - chr8.4:74632423-74632442 MS.gene37366:intron 35.0%
!! TTACACTCTAGAATCTGGAT+TGG - chr8.4:74630561-74630580 MS.gene37366:CDS 35.0%
!!! AGATAGTTTTCAGGTTGAGT+TGG + chr8.4:74632647-74632666 None:intergenic 35.0%
!!! GATAGTTTTCAGGTTGAGTT+GGG + chr8.4:74632646-74632665 None:intergenic 35.0%
!!! GTGTCATTTTTGTGAATACC+AGG - chr8.4:74632420-74632439 MS.gene37366:intron 35.0%
AAGCAGAGATCATACAGTCT+CGG - chr8.4:74632475-74632494 MS.gene37366:intron 40.0%
AATGCTTTCACGTGGTTTCA+AGG - chr8.4:74631417-74631436 MS.gene37366:intron 40.0%
ATTGAGAACTCGGAAATTGG+AGG + chr8.4:74631764-74631783 None:intergenic 40.0%
CGTAAGTTATATATCCCACG+GGG - chr8.4:74631727-74631746 MS.gene37366:CDS 40.0%
GAAAACTATCTCCACCGTAT+TGG - chr8.4:74632656-74632675 MS.gene37366:intron 40.0%
GCATCAAATTGTGATCCTTC+TGG + chr8.4:74630229-74630248 None:intergenic 40.0%
GCTAGCTCAACAAATTGAGA+AGG - chr8.4:74631195-74631214 MS.gene37366:intron 40.0%
GGAATTGTTCCTTTCTGCAA+AGG - chr8.4:74631046-74631065 MS.gene37366:intron 40.0%
GTAGCAATGTGTCTGTTACA+TGG - chr8.4:74631686-74631705 MS.gene37366:CDS 40.0%
TCAACGTCGATAAGGAAGAA+TGG - chr8.4:74632348-74632367 MS.gene37366:intron 40.0%
TGATGATATCCCTAGTGTTC+TGG + chr8.4:74632520-74632539 None:intergenic 40.0%
TGTTTGTAAACACAGTGTCG+TGG - chr8.4:74631492-74631511 MS.gene37366:intron 40.0%
TTGAGAACTCGGAAATTGGA+GGG + chr8.4:74631763-74631782 None:intergenic 40.0%
! ATACGGTGGAGATAGTTTTC+AGG + chr8.4:74632656-74632675 None:intergenic 40.0%
! TTAAAGGAAAGCATGGGAGA+AGG - chr8.4:74631795-74631814 MS.gene37366:CDS 40.0%
!! TTATGGATTAGTTCAGTGCC+AGG - chr8.4:74631147-74631166 MS.gene37366:intron 40.0%
AACACAGTGTCGTGGTAGTT+TGG - chr8.4:74631500-74631519 MS.gene37366:intron 45.0%
AAGACAGCAACATTCTGCTC+TGG - chr8.4:74631106-74631125 MS.gene37366:intron 45.0%
AAGGAACAATTCCCCTTTGC+TGG + chr8.4:74631039-74631058 None:intergenic 45.0%
ACATCCAGACCTTTGCAGAA+AGG + chr8.4:74631058-74631077 None:intergenic 45.0%
ACCATTGACATGGCCACTAA+TGG + chr8.4:74631882-74631901 None:intergenic 45.0%
AGGTCTGGATGTGATTCAAC+AGG - chr8.4:74631066-74631085 MS.gene37366:intron 45.0%
CCATTGACATGGCCACTAAT+GGG + chr8.4:74631881-74631900 None:intergenic 45.0%
CTAGTAATCTCAAGGGCTTC+AGG + chr8.4:74632251-74632270 None:intergenic 45.0%
CTGAAGCCCTTGAGATTACT+AGG - chr8.4:74632249-74632268 MS.gene37366:intron 45.0%
CTGCGAGGCATATATGCTTA+CGG - chr8.4:74630469-74630488 MS.gene37366:CDS 45.0%
GAAGAATTCTTGCCCATCAG+TGG + chr8.4:74630392-74630411 None:intergenic 45.0%
GCTGATGAAATGCTTTCACG+TGG - chr8.4:74631409-74631428 MS.gene37366:intron 45.0%
GTTAAGGTCCATGCTTGTGT+TGG - chr8.4:74631247-74631266 MS.gene37366:intron 45.0%
TATGAGAACTCGAGAAGAGC+CGG + chr8.4:74632558-74632577 None:intergenic 45.0%
TGACATGGACCAGAACACTA+GGG - chr8.4:74632508-74632527 MS.gene37366:intron 45.0%
TGGTGATTTCCTGGGTGTTA+AGG - chr8.4:74631231-74631250 MS.gene37366:intron 45.0%
TGTTCCTTTCTGCAAAGGTC+TGG - chr8.4:74631051-74631070 MS.gene37366:intron 45.0%
TTCACGTGGTTTCAAGGATC+AGG - chr8.4:74631423-74631442 MS.gene37366:intron 45.0%
! ACTCCAACCTGAATTTTGCC+TGG + chr8.4:74632209-74632228 None:intergenic 45.0%
!! AAGAAAAAAAAAAAAAAAAA+AGG + chr8.4:74631541-74631560 None:intergenic 5.0%
!! AGAAAAAAAAAAAAAAAAAA+GGG + chr8.4:74631540-74631559 None:intergenic 5.0%
AACATGTCAAACACACGCCC+TGG + chr8.4:74631337-74631356 None:intergenic 50.0%
AAGCATGGACCTTAACACCC+AGG + chr8.4:74631243-74631262 None:intergenic 50.0%
AAGGTCCATGCTTGTGTTGG+TGG - chr8.4:74631250-74631269 MS.gene37366:intron 50.0%
ACACTGTCGTTGGAACTCCA+GGG - chr8.4:74631317-74631336 MS.gene37366:intron 50.0%
ATCATGCGTGAGTTTCGGTC+CGG - chr8.4:74632536-74632555 MS.gene37366:intron 50.0%
ATCGCCCACTACGACCAATA+CGG + chr8.4:74632673-74632692 None:intergenic 50.0%
ATTAGTTCAGTGCCAGGCCT+TGG - chr8.4:74631153-74631172 MS.gene37366:intron 50.0%
CCCATTAGTGGCCATGTCAA+TGG - chr8.4:74631878-74631897 MS.gene37366:CDS 50.0%
CGCTTTACGAGGATTCTCAC+TGG + chr8.4:74632290-74632309 None:intergenic 50.0%
CTGCCAGGCAAAATTCAGGT+TGG - chr8.4:74632203-74632222 MS.gene37366:intron 50.0%
CTGCTGGAAAATCTTCTGCG+AGG - chr8.4:74630454-74630473 MS.gene37366:CDS 50.0%
GAGAAGGTTATGCGAGCACT+TGG - chr8.4:74631211-74631230 MS.gene37366:intron 50.0%
GCAACTGCCAGGCAAAATTC+AGG - chr8.4:74632199-74632218 MS.gene37366:intron 50.0%
GGCGTGTGTTTGACATGTTG+CGG - chr8.4:74631338-74631357 MS.gene37366:intron 50.0%
GTAATCTCAAGGGCTTCAGG+TGG + chr8.4:74632248-74632267 None:intergenic 50.0%
GTGACATGGACCAGAACACT+AGG - chr8.4:74632507-74632526 MS.gene37366:intron 50.0%
GTGATTCAACAGGCTCAGTC+TGG - chr8.4:74631076-74631095 MS.gene37366:intron 50.0%
GTGTGTTTGACATGTTGCGG+AGG - chr8.4:74631341-74631360 MS.gene37366:intron 50.0%
GTTGAGCTAGCTCCCTTGTT+GGG + chr8.4:74631186-74631205 None:intergenic 50.0%
TCTCATAACCACCGACCTCT+TGG - chr8.4:74632571-74632590 MS.gene37366:CDS 50.0%
TGATGGCAAGAGTCTCGTAG+AGG + chr8.4:74632394-74632413 None:intergenic 50.0%
TGTGAATACCAGGCGGAAAG+TGG - chr8.4:74632430-74632449 MS.gene37366:intron 50.0%
TGTTGAGCTAGCTCCCTTGT+TGG + chr8.4:74631187-74631206 None:intergenic 50.0%
TTCACAGGCTTGCCACTGAT+GGG - chr8.4:74630377-74630396 MS.gene37366:CDS 50.0%
TTGAGCTAGCTCCCTTGTTG+GGG + chr8.4:74631185-74631204 None:intergenic 50.0%
TTGTCCCACCAACACAAGCA+TGG + chr8.4:74631258-74631277 None:intergenic 50.0%
! AACAGGCTCAGTCTGGAACT+GGG - chr8.4:74631083-74631102 MS.gene37366:intron 50.0%
! AGGTCCATGCTTGTGTTGGT+GGG - chr8.4:74631251-74631270 MS.gene37366:intron 50.0%
! AGTGGGCGATTCGGAAGAAA+AGG - chr8.4:74632683-74632702 MS.gene37366:intron 50.0%
! CGAGCACTTGGTGATTTCCT+GGG - chr8.4:74631223-74631242 MS.gene37366:intron 50.0%
! CGTGGTAGTTTGGTGAAGCA+TGG - chr8.4:74631510-74631529 MS.gene37366:intron 50.0%
! GAATTTTGCCTGGCAGTTGC+TGG + chr8.4:74632199-74632218 None:intergenic 50.0%
! GACATTTTCCAGCAACTGCC+AGG - chr8.4:74632188-74632207 MS.gene37366:intron 50.0%
! TCCACCGTATTGGTCGTAGT+GGG - chr8.4:74632666-74632685 MS.gene37366:intron 50.0%
!! ATTGGTCGTAGTGGGCGATT+CGG - chr8.4:74632674-74632693 MS.gene37366:intron 50.0%
!!! CTTGGTTTTGGCCCCAACAA+GGG - chr8.4:74631171-74631190 MS.gene37366:intron 50.0%
AGGGTAATGCAAGTCCCCGT+GGG + chr8.4:74631744-74631763 None:intergenic 55.0%
ATACCAGGCGGAAAGTGGAC+TGG - chr8.4:74632435-74632454 MS.gene37366:intron 55.0%
CACACTGTCGTTGGAACTCC+AGG - chr8.4:74631316-74631335 MS.gene37366:intron 55.0%
CATACAGTCTCGGCCACTCA+TGG - chr8.4:74632485-74632504 MS.gene37366:intron 55.0%
CCTGCTGCACATCGATACCA+CGG + chr8.4:74632598-74632617 None:intergenic 55.0%
CCTTCTGCGATCCAGCAAAG+GGG - chr8.4:74631025-74631044 MS.gene37366:intron 55.0%
CCTTGTTGGGGCCAAAACCA+AGG + chr8.4:74631173-74631192 None:intergenic 55.0%
CGACAGTGTGAACACCAGCT+TGG + chr8.4:74631306-74631325 None:intergenic 55.0%
CGATGTGCAGCAGGTGTCTT+TGG - chr8.4:74632604-74632623 MS.gene37366:CDS 55.0%
CTGCTGCACATCGATACCAC+GGG + chr8.4:74632597-74632616 None:intergenic 55.0%
CTGGTCCATGTCACCATGAG+TGG + chr8.4:74632501-74632520 None:intergenic 55.0%
CTTCACAGGCTTGCCACTGA+TGG - chr8.4:74630376-74630395 MS.gene37366:CDS 55.0%
CTTTGATGCAATGGGGCTGC+TGG - chr8.4:74630438-74630457 MS.gene37366:CDS 55.0%
GATCAGCGCATTCTCCAAGC+TGG - chr8.4:74631289-74631308 MS.gene37366:intron 55.0%
GCCTTCTGCGATCCAGCAAA+GGG - chr8.4:74631024-74631043 MS.gene37366:intron 55.0%
GCTGGTGTTCACACTGTCGT+TGG - chr8.4:74631307-74631326 MS.gene37366:intron 55.0%
TCAGCTCGTCACGCTTTACG+AGG + chr8.4:74632301-74632320 None:intergenic 55.0%
TGGTGGGACAAGTGTTCGTG+AGG - chr8.4:74631267-74631286 MS.gene37366:intron 55.0%
! ATGGCAGGTTTGGCTCCAGA+AGG - chr8.4:74630211-74630230 MS.gene37366:CDS 55.0%
! CAACAGGCTCAGTCTGGAAC+TGG - chr8.4:74631082-74631101 MS.gene37366:intron 55.0%
! CTCCACCGTATTGGTCGTAG+TGG - chr8.4:74632665-74632684 MS.gene37366:intron 55.0%
! GCGAGCACTTGGTGATTTCC+TGG - chr8.4:74631222-74631241 MS.gene37366:intron 55.0%
! TCAGTGCCAGGCCTTGGTTT+TGG - chr8.4:74631159-74631178 MS.gene37366:intron 55.0%
!!! CCTTGGTTTTGGCCCCAACA+AGG - chr8.4:74631170-74631189 MS.gene37366:intron 55.0%
CATCGATACCACGGGCCAAG+AGG + chr8.4:74632589-74632608 None:intergenic 60.0%
CCCCTTTGCTGGATCGCAGA+AGG + chr8.4:74631028-74631047 None:intergenic 60.0%
CGTGACGAGCTGACCCTTGA+AGG - chr8.4:74632308-74632327 MS.gene37366:intron 60.0%
CTCGGCCACTCATGGTGACA+TGG - chr8.4:74632493-74632512 MS.gene37366:intron 60.0%
GAGGGTAATGCAAGTCCCCG+TGG + chr8.4:74631745-74631764 None:intergenic 60.0%
GATACCACGGGCCAAGAGGT+CGG + chr8.4:74632585-74632604 None:intergenic 60.0%
GCCCACTACGACCAATACGG+TGG + chr8.4:74632670-74632689 None:intergenic 60.0%
GGCCTTCTGCGATCCAGCAA+AGG - chr8.4:74631023-74631042 MS.gene37366:intron 60.0%
TTGGGGCCAAAACCAAGGCC+TGG + chr8.4:74631168-74631187 None:intergenic 60.0%
!! CCGTGGTATCGATGTGCAGC+AGG - chr8.4:74632595-74632614 MS.gene37366:CDS 60.0%
!! GCGGAAAGTGGACTGGCTCA+CGG - chr8.4:74632442-74632461 MS.gene37366:intron 60.0%
GAGCCAGTCCACTTTCCGCC+TGG + chr8.4:74632441-74632460 None:intergenic 65.0%
ACCACCGACCTCTTGGCCCG+TGG - chr8.4:74632578-74632597 MS.gene37366:CDS 70.0%
ACCACGGGCCAAGAGGTCGG+TGG + chr8.4:74632582-74632601 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 74630211 74632817 74630211 ID=MS.gene37366
chr8.4 mRNA 74630211 74632817 74630211 ID=MS.gene37366.t1;Parent=MS.gene37366
chr8.4 exon 74632750 74632817 74632750 ID=MS.gene37366.t1.exon1;Parent=MS.gene37366.t1
chr8.4 CDS 74632750 74632817 74632750 ID=cds.MS.gene37366.t1;Parent=MS.gene37366.t1
chr8.4 exon 74632538 74632644 74632538 ID=MS.gene37366.t1.exon2;Parent=MS.gene37366.t1
chr8.4 CDS 74632538 74632644 74632538 ID=cds.MS.gene37366.t1;Parent=MS.gene37366.t1
chr8.4 exon 74631584 74632014 74631584 ID=MS.gene37366.t1.exon3;Parent=MS.gene37366.t1
chr8.4 CDS 74631584 74632014 74631584 ID=cds.MS.gene37366.t1;Parent=MS.gene37366.t1
chr8.4 exon 74630211 74630846 74630211 ID=MS.gene37366.t1.exon4;Parent=MS.gene37366.t1
chr8.4 CDS 74630211 74630846 74630211 ID=cds.MS.gene37366.t1;Parent=MS.gene37366.t1
Gene Sequence

>MS.gene37366

ATGGCAGGTTTGGCTCCAGAAGGATCACAATTTGATGCTAATCATTATGACTCTAAGATGAATGAACTGTTTGTTTCTGTGCTTCATATTCTTCACTGTTAATTATGATTGAATTTGTTATTCATGTACCTTTTTTTTCTTGTAATTTGACGTCTTGTACATTAACTTCACAGGCTTGCCACTGATGGGCAAGAATTCTTCACCTCGTATGATGAAGTATATGATAGCTTTGATGCAATGGGGCTGCTGGAAAATCTTCTGCGAGGCATATATGCTTACGGTATGTACTGGAAAATTGATCCCCTTATTTTACGTGCTTATTCTTATTATGGTAGGTCAGTAAGCAAGATTTACACTCTAGAATCTGGATTGGATCTAATGTGTTTTGAATTTTGATATATTTGATGTATTCTCCCTGTTCAAATTATAAAGTGCTTATAATATATTGATGCAATCAACTCTTCAAGATCTTTTGACAAAAATTTAATACTAATTCCTTCTAGTAAAACGTAATATGTTGTTCTGGATTTATTGTTTTGTAATTAAATTGGAATGGTAATGTGATTGAATCAATTATTTTAGATATAACTGTGTTTCAAAATTATTTACCGGCTGGAAGAGAAATGATAAAATGGACAAATGTGATTGAATCAAATAGTTTTCTAAATTTTTTAATGTTTTAAAAATGAGTGCATCTTTCATGAAGGCATCAATAATATATATGTTAAAAATAAACATTACTCTCGCCAGTTGCTACAGTTATCATGAAATCACGTGTGTCATGTTTTACCTTGTTTTGAAAGGTTTTGAGAGGCCTTCTGCGATCCAGCAAAGGGGAATTGTTCCTTTCTGCAAAGGTCTGGATGTGATTCAACAGGCTCAGTCTGGAACTGGGAAGACAGCAACATTCTGCTCTGGAATTTTGCAGCAGCTTGATTATGGATTAGTTCAGTGCCAGGCCTTGGTTTTGGCCCCAACAAGGGAGCTAGCTCAACAAATTGAGAAGGTTATGCGAGCACTTGGTGATTTCCTGGGTGTTAAGGTCCATGCTTGTGTTGGTGGGACAAGTGTTCGTGAGGATCAGCGCATTCTCCAAGCTGGTGTTCACACTGTCGTTGGAACTCCAGGGCGTGTGTTTGACATGTTGCGGAGGCAGTCTCTACGCTCAGATTGCATAAAGATGTTTGTTCTGGATGAAGCTGATGAAATGCTTTCACGTGGTTTCAAGGATCAGGTTCGTCAATATGCTCATTTTCCACCTTTTGACTTAACTAATTCCATTGTTTGTAAACACAGTGTCGTGGTAGTTTGGTGAAGCATGGATTTCCCTTTTTTTTTTTTTTTTTTCTTTTCTTTTCTTTTTTATTTAGTAAGAATGTCTCATGCGGTTCTTTATCTTCCCCCTCTGTTTGAGTCTTTTATATATTTAAACATGCACAAGGTTTTCCTTTCATCCATTTTTCATTCATAATGTGGTAGCAATGTGTCTGTTACATGGACGAGTCAGCTGTAACGACGTAAGTTATATATCCCACGGGGACTTGCATTACCCTCCAATTTCCGAGTTCTCAATTAGGACTAGTGTTAAAGGAAAGCATGGGAGAAGGCATAAATCACAAATCAGGAGAGATTAAGGGGCTATTATCCTATTAGTGCTTACAAAATCACCCATTAGTGGCCATGTCAATGGTTTTTGAATGGAAAATTGGAAAAAGGAAAACCGTGTGCATGTTTTCAAAGATAAAGGGCCGAAATTTAAAACAAAGAAGAAAAAAAGACTAATTTGTTATTAAAAAAAATAAGACATAGGACCGCATGATTATTTTTCTCTTTTCTTTATTCATTCATTCATTTATTTATAAAATGCAAAAGAAGTGTGCTTTATTAACTGAATCTTAATGCAGCCATGTCTAGCTGAAAGTTTATGTTCCATCTTACATGGCATTATGAAAACTTTTGTTGGTGTTGCAGATCTATGACATTTTCCAGCAACTGCCAGGCAAAATTCAGGTTGGAGTATTTTCTGCTACAATGCCACCTGAAGCCCTTGAGATTACTAGGAAGTTCATGAATAAGCCAGTGAGAATCCTCGTAAAGCGTGACGAGCTGACCCTTGAAGGTATCAAGCAATTTTATGTCAACGTCGATAAGGAAGAATGGAAGCTTGAGACATTATGCGACCTCTACGAGACTCTTGCCATCACTCAGAGTGTCATTTTTGTGAATACCAGGCGGAAAGTGGACTGGCTCACGGATAAGATGCGAAGCAGAGATCATACAGTCTCGGCCACTCATGGTGACATGGACCAGAACACTAGGGATATCATCATGCGTGAGTTTCGGTCCGGCTCTTCTCGAGTTCTCATAACCACCGACCTCTTGGCCCGTGGTATCGATGTGCAGCAGGTGTCTTTGGTCATAAACTATGATCTCCCAACTCAACCTGAAAACTATCTCCACCGTATTGGTCGTAGTGGGCGATTCGGAAGAAAAGGTGTTTCTATTAACTTTGTGACAATAGATGATGCTAGAATGTTGGCTGATATTCAGAAATTCTACAATGTGATTATAGAGGAGCTGCCATCAAATGTTGCTGATTTGCTCTGA
Protein sequence

>MS.gene37366.t1

MAGLAPEGSQFDANHYDSKMNELLATDGQEFFTSYDEVYDSFDAMGLLENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDFLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQQLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTIDDARMLADIQKFYNVIIEELPSNVADLL