AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07826

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07826.t1 MTR_8g018400 98.547 413 6 0 1 413 1 413 0.0 841
MS.gene07826.t1 MTR_2g099620 94.431 413 23 0 1 413 1 413 0.0 813
MS.gene07826.t1 MTR_2g039960 92.736 413 30 0 1 413 1 413 0.0 798
MS.gene07826.t1 MTR_4g125970 91.283 413 36 0 1 413 1 413 0.0 786
MS.gene07826.t1 MTR_4g125970 91.283 413 36 0 1 413 18 430 0.0 785
MS.gene07826.t1 MTR_2g099620 94.430 395 22 0 19 413 3 397 0.0 774
MS.gene07826.t1 MTR_2g438110 64.075 373 134 0 41 413 34 406 0.0 510
MS.gene07826.t1 MTR_1g046570 62.183 394 112 5 56 413 6 398 2.58e-166 472
MS.gene07826.t1 MTR_8g018370 66.185 346 90 4 71 413 3 324 9.67e-154 437
MS.gene07826.t1 MTR_7g076820 41.033 368 213 4 40 406 149 513 3.73e-87 274
MS.gene07826.t1 MTR_7g076800 40.489 368 215 4 40 406 140 504 7.37e-86 271
MS.gene07826.t1 MTR_7g076830 40.489 368 215 4 40 406 142 506 8.11e-86 271
MS.gene07826.t1 MTR_1g012420 38.859 368 219 6 47 409 53 419 1.43e-75 241
MS.gene07826.t1 MTR_3g107420 39.674 368 216 6 47 409 53 419 2.34e-75 241
MS.gene07826.t1 MTR_4g010565 38.859 368 219 6 47 409 130 496 5.09e-73 237
MS.gene07826.t1 MTR_3g467550 35.467 375 220 5 40 396 116 486 2.66e-67 224
MS.gene07826.t1 MTR_8g018350 65.089 169 45 5 252 413 15 176 6.34e-66 208
MS.gene07826.t1 MTR_3g467550 35.326 368 216 5 47 396 92 455 2.66e-65 218
MS.gene07826.t1 MTR_2g100230 35.440 364 221 3 41 394 96 455 1.27e-63 212
MS.gene07826.t1 MTR_1g061970 34.673 398 222 12 41 405 80 472 5.16e-63 211
MS.gene07826.t1 MTR_4g049910 33.506 385 228 9 41 405 55 431 2.24e-61 205
MS.gene07826.t1 MTR_8g018330 59.524 168 57 4 252 413 15 177 8.32e-61 195
MS.gene07826.t1 MTR_4g134170 31.765 425 249 7 10 397 247 667 9.84e-61 209
MS.gene07826.t1 MTR_3g449250 34.324 370 232 5 45 406 94 460 2.47e-60 205
MS.gene07826.t1 MTR_3g449250 34.324 370 232 5 45 406 94 460 4.18e-60 205
MS.gene07826.t1 MTR_7g109720 33.795 361 232 4 41 394 232 592 6.20e-60 208
MS.gene07826.t1 MTR_0915s0010 39.437 284 168 4 54 336 2 282 1.35e-59 196
MS.gene07826.t1 MTR_5g090120 34.043 376 235 6 45 411 85 456 3.87e-59 202
MS.gene07826.t1 MTR_6g005320 32.220 419 244 8 15 397 213 627 3.45e-58 201
MS.gene07826.t1 MTR_3g083690 33.077 390 238 6 40 407 144 532 3.79e-58 200
MS.gene07826.t1 MTR_6g082080 33.154 371 244 3 41 408 10 379 4.72e-58 196
MS.gene07826.t1 MTR_7g056830 33.154 371 244 3 41 408 10 379 7.90e-58 196
MS.gene07826.t1 MTR_4g105100 34.435 363 232 3 41 397 202 564 9.03e-58 199
MS.gene07826.t1 MTR_4g079320 32.708 373 241 5 42 407 20 389 2.50e-56 198
MS.gene07826.t1 MTR_4g114120 32.908 392 234 6 42 407 141 529 1.88e-55 194
MS.gene07826.t1 MTR_3g467550 34.821 336 197 5 40 357 116 447 3.36e-55 189
MS.gene07826.t1 MTR_2g066050 33.889 360 233 2 41 395 53 412 5.03e-54 187
MS.gene07826.t1 MTR_1g054630 32.152 395 234 8 40 407 153 540 7.08e-54 189
MS.gene07826.t1 MTR_2g007000 33.333 384 240 6 41 412 504 883 1.02e-53 192
MS.gene07826.t1 MTR_1g026830 29.820 389 254 8 41 413 147 532 4.78e-53 186
MS.gene07826.t1 MTR_2g032630 33.149 362 235 4 41 396 496 856 2.73e-52 188
MS.gene07826.t1 MTR_1g095810 29.820 389 254 8 41 413 145 530 3.06e-52 184
MS.gene07826.t1 MTR_6g005550 31.579 380 249 5 41 412 165 541 2.02e-51 184
MS.gene07826.t1 MTR_3g049990 32.902 386 240 7 25 396 133 513 3.05e-50 181
MS.gene07826.t1 MTR_5g027840 33.062 369 229 6 28 384 95 457 6.31e-50 176
MS.gene07826.t1 MTR_6g033070 31.319 364 238 6 41 394 140 501 1.99e-47 170
MS.gene07826.t1 MTR_2g041140 32.115 383 244 7 27 396 124 503 3.07e-46 169
MS.gene07826.t1 MTR_2g055850 30.707 368 232 12 40 391 90 450 2.35e-40 151
MS.gene07826.t1 MTR_6g056080 30.199 351 218 6 45 380 115 453 2.68e-40 152
MS.gene07826.t1 MTR_4g112340 29.970 337 217 8 50 372 106 437 8.08e-40 150
MS.gene07826.t1 MTR_3g071620 28.571 364 232 7 47 383 22 384 1.75e-39 149
MS.gene07826.t1 MTR_4g105100 32.686 309 202 3 41 343 202 510 1.87e-39 148
MS.gene07826.t1 MTR_2g063080 25.708 424 250 7 41 402 109 529 3.19e-39 148
MS.gene07826.t1 MTR_7g100820 27.225 382 269 5 34 412 130 505 4.75e-39 148
MS.gene07826.t1 MTR_7g057250 26.862 443 234 10 39 399 161 595 8.27e-38 145
MS.gene07826.t1 MTR_8g027780 27.919 394 237 11 42 406 107 482 7.28e-37 141
MS.gene07826.t1 MTR_1g102410 28.099 363 226 5 49 380 52 410 5.73e-36 139
MS.gene07826.t1 MTR_8g027770 27.665 394 238 9 42 406 202 577 8.14e-36 139
MS.gene07826.t1 MTR_1g083130 26.650 409 245 8 41 397 26 431 1.34e-35 138
MS.gene07826.t1 MTR_8g027775 28.497 386 245 10 42 406 103 478 2.58e-35 137
MS.gene07826.t1 MTR_8g097000 27.226 393 246 10 42 406 289 669 3.97e-34 135
MS.gene07826.t1 MTR_4g068990 29.155 343 222 11 68 395 102 438 6.37e-34 134
MS.gene07826.t1 MTR_5g092560 27.989 368 240 11 68 413 102 466 4.96e-32 129
MS.gene07826.t1 MTR_6g039840 28.272 382 242 10 41 396 110 485 5.85e-32 128
MS.gene07826.t1 MTR_3g107420 41.146 192 110 3 47 235 53 244 1.87e-31 122
MS.gene07826.t1 MTR_4g112320 29.615 260 173 6 117 372 2 255 1.48e-29 119
MS.gene07826.t1 MTR_8g027780 27.353 340 208 10 42 352 107 436 1.17e-26 111
MS.gene07826.t1 MTR_5g069330 26.221 389 267 7 36 413 2 381 2.51e-26 110
MS.gene07826.t1 MTR_5g069330 26.302 384 263 7 41 413 3 377 3.31e-26 109
MS.gene07826.t1 MTR_4g131750 25.964 389 241 12 49 399 90 469 1.37e-24 105
MS.gene07826.t1 MTR_0427s0010 31.169 231 109 8 198 405 3 206 2.88e-24 100
MS.gene07826.t1 MTR_3g118120 26.718 393 250 11 24 383 120 507 6.45e-24 104
MS.gene07826.t1 MTR_6g039840 28.618 304 194 8 110 396 12 309 1.01e-23 103
MS.gene07826.t1 MTR_4g077370 37.634 186 113 1 41 223 250 435 9.31e-23 100
MS.gene07826.t1 MTR_4g077370 35.079 191 96 4 41 223 2 172 8.69e-17 82.4
MS.gene07826.t1 MTR_4g068990 29.911 224 144 6 181 395 8 227 2.05e-21 96.7
MS.gene07826.t1 MTR_5g077690 23.238 383 215 6 79 389 71 446 5.87e-21 95.1
MS.gene07826.t1 MTR_1g022305 25.294 340 182 11 63 395 26 300 4.44e-20 92.4
MS.gene07826.t1 MTR_5g092560 29.493 217 145 5 181 390 8 223 8.64e-20 91.7
MS.gene07826.t1 MTR_8g032230 37.681 138 79 2 41 174 10 144 7.65e-18 80.9
MS.gene07826.t1 MTR_4g459350 31.183 186 118 5 41 217 41 225 7.76e-18 83.6
MS.gene07826.t1 MTR_8g042690 21.859 398 285 11 24 404 1 389 2.25e-17 84.3
MS.gene07826.t1 MTR_4g059460 31.183 186 118 5 41 217 44 228 4.33e-17 84.0
MS.gene07826.t1 MTR_4g059460 36.082 97 61 1 310 406 392 487 3.85e-14 74.7
MS.gene07826.t1 MTR_2g043360 30.645 186 119 5 41 217 41 225 1.49e-16 82.0
MS.gene07826.t1 MTR_2g043360 36.082 97 61 1 310 406 389 484 9.02e-15 76.6
MS.gene07826.t1 MTR_2g043360 36.082 97 61 1 310 406 271 366 8.43e-15 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07826.t1 AT1G54270 91.063 414 34 2 1 413 1 412 0.0 780
MS.gene07826.t1 AT3G13920 90.821 414 35 2 1 413 1 412 0.0 778
MS.gene07826.t1 AT1G54270 89.855 414 34 3 1 413 1 407 0.0 763
MS.gene07826.t1 AT1G72730 87.440 414 51 1 1 413 1 414 0.0 761
MS.gene07826.t1 AT3G13920 89.614 414 35 3 1 413 1 407 0.0 760
MS.gene07826.t1 AT3G13920 92.784 388 27 1 27 413 15 402 0.0 747
MS.gene07826.t1 AT3G13920 90.840 393 33 2 1 392 1 391 0.0 735
MS.gene07826.t1 AT3G13920 90.840 393 33 2 1 392 5 395 0.0 735
MS.gene07826.t1 AT3G19760 62.468 389 139 1 25 413 27 408 2.14e-179 506
MS.gene07826.t1 AT1G51380 58.266 369 154 0 41 409 23 391 1.38e-161 460
MS.gene07826.t1 AT1G51380 57.937 252 106 0 41 292 23 274 1.03e-106 316
MS.gene07826.t1 AT3G61240 38.575 407 243 6 6 409 89 491 3.56e-88 276
MS.gene07826.t1 AT3G61240 38.575 407 243 6 6 409 89 491 3.56e-88 276
MS.gene07826.t1 AT4G00660 39.623 371 220 4 40 409 131 498 3.75e-87 274
MS.gene07826.t1 AT4G00660 39.623 371 220 4 40 409 131 498 3.75e-87 274
MS.gene07826.t1 AT2G45810 39.241 395 223 7 14 407 141 519 8.53e-86 271
MS.gene07826.t1 AT1G51380 55.450 211 94 0 41 251 23 233 2.75e-81 252
MS.gene07826.t1 AT1G51380 55.450 211 94 0 41 251 23 233 5.27e-81 251
MS.gene07826.t1 AT5G11170 37.692 390 236 7 26 409 31 419 1.53e-74 239
MS.gene07826.t1 AT5G11200 37.692 390 236 7 26 409 31 419 1.53e-74 239
MS.gene07826.t1 AT5G11170 38.576 337 201 6 78 409 1 336 7.32e-68 219
MS.gene07826.t1 AT3G53110 35.000 400 232 11 33 407 81 477 1.82e-67 223
MS.gene07826.t1 AT5G11200 34.571 431 234 8 26 409 31 460 2.28e-66 219
MS.gene07826.t1 AT5G26742 35.000 420 244 10 9 413 80 485 1.30e-64 220
MS.gene07826.t1 AT5G26742 35.000 420 244 10 9 413 80 485 1.32e-64 220
MS.gene07826.t1 AT1G55150 34.722 360 229 2 41 394 100 459 4.19e-64 214
MS.gene07826.t1 AT1G55150 34.722 360 229 2 41 394 125 484 5.14e-64 214
MS.gene07826.t1 AT5G63120 35.171 381 235 3 42 413 167 544 3.36e-63 213
MS.gene07826.t1 AT5G26742 35.938 384 214 10 45 413 26 392 5.48e-63 214
MS.gene07826.t1 AT2G33730 32.624 423 248 7 10 397 274 694 1.98e-62 214
MS.gene07826.t1 AT3G22310 34.946 372 229 6 45 407 121 488 2.65e-62 211
MS.gene07826.t1 AT3G22310 34.946 372 229 6 45 407 121 488 3.50e-62 211
MS.gene07826.t1 AT3G22330 34.677 372 230 6 45 407 109 476 1.47e-61 209
MS.gene07826.t1 AT1G77030 31.989 372 245 4 42 407 30 399 2.14e-59 207
MS.gene07826.t1 AT2G47330 33.681 383 239 6 41 412 229 607 4.38e-58 202
MS.gene07826.t1 AT3G58570 32.997 397 243 7 33 406 136 532 5.59e-57 198
MS.gene07826.t1 AT3G58510 33.420 383 229 8 43 406 160 535 5.96e-57 197
MS.gene07826.t1 AT3G58510 33.420 383 229 8 43 406 160 535 5.96e-57 197
MS.gene07826.t1 AT3G58510 33.420 383 229 8 43 406 160 535 5.96e-57 197
MS.gene07826.t1 AT5G14610 33.071 381 242 6 41 412 170 546 7.51e-57 197
MS.gene07826.t1 AT5G14610 33.071 381 242 6 41 412 162 538 7.69e-57 197
MS.gene07826.t1 AT5G14610 33.071 381 242 6 41 412 162 538 8.74e-57 197
MS.gene07826.t1 AT1G20920 33.245 376 241 5 46 412 197 571 2.41e-56 199
MS.gene07826.t1 AT3G01540 34.817 382 234 10 41 412 159 535 5.18e-56 195
MS.gene07826.t1 AT3G01540 34.817 382 234 10 41 412 159 535 5.18e-56 195
MS.gene07826.t1 AT3G01540 34.817 382 234 10 41 412 159 535 5.18e-56 195
MS.gene07826.t1 AT3G01540 34.817 382 234 10 41 412 159 535 5.42e-56 195
MS.gene07826.t1 AT5G60990 32.242 397 243 7 36 413 5 394 5.43e-56 191
MS.gene07826.t1 AT3G06480 34.456 386 234 6 39 412 434 812 5.60e-56 199
MS.gene07826.t1 AT2G42520 33.750 400 235 9 33 404 149 546 7.34e-56 194
MS.gene07826.t1 AT2G42520 33.750 400 235 9 33 404 149 546 7.34e-56 194
MS.gene07826.t1 AT2G42520 33.750 400 235 9 33 404 149 546 7.34e-56 194
MS.gene07826.t1 AT1G20920 33.509 379 236 6 46 412 535 909 7.35e-55 196
MS.gene07826.t1 AT1G20920 33.509 379 236 6 46 412 535 909 7.35e-55 196
MS.gene07826.t1 AT1G20920 33.509 379 236 6 46 412 535 909 7.35e-55 196
MS.gene07826.t1 AT1G20920 33.509 379 236 6 46 412 535 909 7.35e-55 196
MS.gene07826.t1 AT1G20920 33.509 379 236 6 46 412 535 909 7.35e-55 196
MS.gene07826.t1 AT1G20920 33.509 379 236 6 46 412 535 909 7.35e-55 196
MS.gene07826.t1 AT1G16280 32.632 380 240 5 30 396 43 419 1.47e-53 186
MS.gene07826.t1 AT5G14610 32.153 367 236 6 55 412 45 407 5.98e-53 184
MS.gene07826.t1 AT5G14610 32.153 367 236 6 55 412 45 407 5.98e-53 184
MS.gene07826.t1 AT4G16630 33.156 377 243 4 29 396 153 529 2.10e-52 187
MS.gene07826.t1 AT3G02065 32.603 365 233 5 41 394 111 473 3.43e-52 182
MS.gene07826.t1 AT3G02065 32.603 365 233 5 41 394 111 473 3.43e-52 182
MS.gene07826.t1 AT5G14610 31.842 380 246 6 42 412 231 606 6.65e-52 185
MS.gene07826.t1 AT4G33370 30.155 388 252 8 41 412 98 482 5.56e-51 180
MS.gene07826.t1 AT5G11200 30.735 449 245 10 26 409 31 478 8.39e-51 178
MS.gene07826.t1 AT5G51280 30.435 391 247 8 41 412 147 531 1.32e-50 180
MS.gene07826.t1 AT1G28180 32.682 358 218 6 63 410 5 349 5.87e-50 173
MS.gene07826.t1 AT1G31970 33.333 357 223 5 41 384 117 471 6.11e-50 177
MS.gene07826.t1 AT3G02065 33.131 329 207 5 77 394 10 336 1.90e-47 166
MS.gene07826.t1 AT3G09620 32.181 376 210 8 46 409 403 745 2.79e-47 174
MS.gene07826.t1 AT3G09620 32.181 376 210 8 46 409 402 744 3.19e-47 174
MS.gene07826.t1 AT3G18600 30.851 376 250 6 41 408 90 463 2.94e-46 167
MS.gene07826.t1 AT1G12770 27.182 401 230 6 41 381 111 509 1.25e-45 166
MS.gene07826.t1 AT1G12770 27.182 401 230 6 41 381 111 509 1.25e-45 166
MS.gene07826.t1 AT3G09720 29.319 382 261 5 34 412 138 513 2.80e-45 164
MS.gene07826.t1 AT3G09720 29.319 382 261 5 34 412 138 513 2.80e-45 164
MS.gene07826.t1 AT5G63120 34.727 311 191 3 42 343 167 474 1.31e-43 159
MS.gene07826.t1 AT5G63120 34.727 311 191 3 42 343 167 474 1.31e-43 159
MS.gene07826.t1 AT5G63120 34.727 311 191 3 42 343 167 474 1.31e-43 159
MS.gene07826.t1 AT5G63120 34.727 311 191 3 42 343 167 474 1.32e-43 159
MS.gene07826.t1 AT5G62190 31.117 376 231 9 55 411 111 477 1.28e-42 159
MS.gene07826.t1 AT5G65900 29.805 359 244 5 41 391 155 513 1.34e-42 158
MS.gene07826.t1 AT5G05450 29.609 358 227 7 50 383 26 382 1.16e-41 155
MS.gene07826.t1 AT1G71370 30.114 352 230 7 47 383 23 373 3.50e-41 153
MS.gene07826.t1 AT5G14610 31.627 332 214 6 41 363 170 497 1.05e-40 151
MS.gene07826.t1 AT3G06480 32.822 326 200 6 39 352 434 752 4.43e-39 149
MS.gene07826.t1 AT5G63630 29.167 384 245 8 42 406 56 431 7.92e-37 141
MS.gene07826.t1 AT5G08610 29.442 394 231 10 42 406 384 759 2.31e-36 142
MS.gene07826.t1 AT5G08620 28.894 398 240 9 42 412 82 463 3.63e-36 139
MS.gene07826.t1 AT5G63630 29.167 384 245 8 42 406 250 625 7.06e-36 140
MS.gene07826.t1 AT2G07750 26.799 403 254 11 35 407 368 759 2.00e-34 136
MS.gene07826.t1 AT1G63250 28.150 373 230 9 35 377 321 685 6.39e-34 134
MS.gene07826.t1 AT5G54910 28.030 396 260 13 17 396 49 435 1.72e-32 130
MS.gene07826.t1 AT4G34910 26.277 411 246 8 41 397 47 454 5.35e-32 128
MS.gene07826.t1 AT2G40700 25.280 447 252 13 41 406 31 476 3.31e-30 123
MS.gene07826.t1 AT3G16840 26.196 439 237 11 39 400 190 618 4.04e-30 123
MS.gene07826.t1 AT3G16840 26.196 439 237 11 39 400 189 617 4.31e-30 123
MS.gene07826.t1 AT4G09730 26.289 388 250 9 37 396 109 488 4.09e-29 120
MS.gene07826.t1 AT5G19210 27.506 389 232 13 49 399 85 461 7.84e-29 117
MS.gene07826.t1 AT1G71280 29.167 312 181 9 47 345 24 308 2.22e-28 114
MS.gene07826.t1 AT1G71280 29.167 312 181 9 47 345 24 308 1.78e-27 114
MS.gene07826.t1 AT3G06980 28.158 380 231 13 41 383 375 749 2.02e-26 112
MS.gene07826.t1 AT4G15850 25.389 386 212 13 79 394 74 453 6.34e-25 107
MS.gene07826.t1 AT5G19210 25.625 320 178 12 123 399 2 304 2.90e-15 76.6
MS.gene07826.t1 AT5G19210 25.625 320 178 12 123 399 2 304 2.90e-15 76.6
MS.gene07826.t1 AT1G28180 34.959 123 63 3 63 177 5 118 3.64e-11 60.8

Find 103 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCGAGCACTTGGTGATTTCC+TGG 0.285082 8.3:+72222387 MS.gene07826:CDS
GTTGAGCTAGCTCCCTTGTT+GGG 0.301077 8.3:-72222348 None:intergenic
CTAGTAATCTCAAGGGCTTC+AGG 0.311812 8.3:-72223407 None:intergenic
TCAGTGCCAGGCCTTGGTTT+TGG 0.316764 8.3:+72222324 MS.gene07826:CDS
GCATCAAATTGTGATCCTTC+TGG 0.320747 8.3:-72221391 None:intergenic
AAGGAACAATTCCCCTTTGC+TGG 0.322871 8.3:-72222201 None:intergenic
TTGCATAAAGATGTTTGTTC+TGG 0.341471 8.3:+72222546 MS.gene07826:CDS
CAACAGGCTCAGTCTGGAAC+TGG 0.352918 8.3:+72222247 MS.gene07826:CDS
TGGTGATTTCCTGGGTGTTA+AGG 0.370414 8.3:+72222396 MS.gene07826:CDS
CGTGACGAGCTGACCCTTGA+AGG 0.374139 8.3:+72223467 MS.gene07826:CDS
CGATGTGCAGCAGGTGTCTT+TGG 0.375487 8.3:+72223763 MS.gene07826:CDS
TGTTCCTTTCTGCAAAGGTC+TGG 0.389951 8.3:+72222216 MS.gene07826:CDS
GCAACTGCCAGGCAAAATTC+AGG 0.391968 8.3:+72223358 MS.gene07826:CDS
CTTTGATGCAATGGGGCTGC+TGG 0.392582 8.3:+72221603 MS.gene07826:CDS
TGTTGAGCTAGCTCCCTTGT+TGG 0.396681 8.3:-72222349 None:intergenic
TTCACGTGGTTTCAAGGATC+AGG 0.397596 8.3:+72222588 MS.gene07826:CDS
CACACTGTCGTTGGAACTCC+AGG 0.399453 8.3:+72222481 MS.gene07826:CDS
CTGAAGCCCTTGAGATTACT+AGG 0.401600 8.3:+72223408 MS.gene07826:CDS
AGCAAATCAGCAACATTTGA+TGG 0.401883 8.3:-72223950 None:intergenic
TGATGATATCCCTAGTGTTC+TGG 0.402762 8.3:-72223676 None:intergenic
ATTAGTTCAGTGCCAGGCCT+TGG 0.405157 8.3:+72222318 MS.gene07826:CDS
AAAATTGCTTGATACCTTCA+AGG 0.420605 8.3:-72223481 None:intergenic
AATGCTTTCACGTGGTTTCA+AGG 0.431053 8.3:+72222582 MS.gene07826:CDS
TATGATAGCTTTGATGCAAT+GGG 0.435993 8.3:+72221595 MS.gene07826:CDS
GTGATTCAACAGGCTCAGTC+TGG 0.448350 8.3:+72222241 MS.gene07826:CDS
ATATCATCATGCGTGAGTTT+CGG 0.448555 8.3:+72223690 MS.gene07826:CDS
CTTCACAGGCTTGCCACTGA+TGG 0.452513 8.3:+72221541 MS.gene07826:intron
TCAGCTCGTCACGCTTTATG+AGG 0.453448 8.3:-72223457 None:intergenic
ATTGGTCGTAGTGGGCGATT+CGG 0.462471 8.3:+72223833 MS.gene07826:CDS
AGGTCTGGATGTGATTCAAC+AGG 0.474852 8.3:+72222231 MS.gene07826:CDS
GCCTTCTGCGATCCAGCAAA+GGG 0.477334 8.3:+72222189 MS.gene07826:CDS
AAGGTCCATGCTTGTGTTGG+TGG 0.489722 8.3:+72222415 MS.gene07826:CDS
GAAAACTATCTCCACCGTAT+TGG 0.495070 8.3:+72223815 MS.gene07826:CDS
AAGACAGCAACATTCTGCTC+TGG 0.497997 8.3:+72222271 MS.gene07826:CDS
TCTCATAACCACCGACCTCT+TGG 0.503780 8.3:+72223730 MS.gene07826:CDS
CCGTGGTATCGATGTGCAGC+AGG 0.506103 8.3:+72223754 MS.gene07826:CDS
ATTCTACAATGTGATTATAG+AGG 0.506162 8.3:+72223922 MS.gene07826:CDS
GAGAAGGTTATGCGAGCACT+TGG 0.508066 8.3:+72222376 MS.gene07826:CDS
CTGCGAGGCATATATGCTTA+CGG 0.509659 8.3:+72221634 MS.gene07826:CDS
TTATGGATTAGTTCAGTGCC+AGG 0.515771 8.3:+72222312 MS.gene07826:CDS
CGCTTTATGAGGATTCTCAC+TGG 0.517906 8.3:-72223446 None:intergenic
CCCCTTTGCTGGATCGCAGA+AGG 0.518165 8.3:-72222190 None:intergenic
TTGAGCTAGCTCCCTTGTTG+GGG 0.518225 8.3:-72222347 None:intergenic
GGAATTGTTCCTTTCTGCAA+AGG 0.520763 8.3:+72222211 MS.gene07826:CDS
TATGAGAACTCGAGAAGAGC+CGG 0.524126 8.3:-72223714 None:intergenic
TCAACGTCGATAAGGAAGAA+TGG 0.527838 8.3:+72223507 MS.gene07826:CDS
AGTGGGCGATTCGGAAGAAA+AGG 0.528669 8.3:+72223842 MS.gene07826:CDS
GTTAAGGTCCATGCTTGTGT+TGG 0.529918 8.3:+72222412 MS.gene07826:CDS
TTGGGGCCAAAACCAAGGCC+TGG 0.530111 8.3:-72222330 None:intergenic
TGTGAATACCAGGCGGAAAG+TGG 0.532599 8.3:+72223589 MS.gene07826:CDS
GTGACATGGACCAGAACACT+AGG 0.533768 8.3:+72223666 MS.gene07826:CDS
GGCCTTCTGCGATCCAGCAA+AGG 0.537117 8.3:+72222188 MS.gene07826:CDS
ATATGATAGCTTTGATGCAA+TGG 0.538319 8.3:+72221594 MS.gene07826:CDS
GAGCCAGTCCACTTTCCGCC+TGG 0.540700 8.3:-72223597 None:intergenic
CTCCACCGTATTGGTCGTAG+TGG 0.543762 8.3:+72223824 MS.gene07826:CDS
CATACAGTCTCGGCCACTCA+TGG 0.544977 8.3:+72223644 MS.gene07826:CDS
CGACAGTGTGAACACCAGCT+TGG 0.545095 8.3:-72222468 None:intergenic
ATACCAGGCGGAAAGTGGAC+TGG 0.545618 8.3:+72223594 MS.gene07826:CDS
CGAGCACTTGGTGATTTCCT+GGG 0.547351 8.3:+72222388 MS.gene07826:CDS
AGGTCCATGCTTGTGTTGGT+GGG 0.553229 8.3:+72222416 MS.gene07826:CDS
TGAACTTCCTAGTAATCTCA+AGG 0.555172 8.3:-72223415 None:intergenic
TTCACAGGCTTGCCACTGAT+GGG 0.561668 8.3:+72221542 MS.gene07826:intron
AACAGGCTCAGTCTGGAACT+GGG 0.561973 8.3:+72222248 MS.gene07826:CDS
ATCGCCCACTACGACCAATA+CGG 0.565807 8.3:-72223829 None:intergenic
ACATCCAGACCTTTGCAGAA+AGG 0.567685 8.3:-72222220 None:intergenic
ATCATGCGTGAGTTTCGGTC+CGG 0.573408 8.3:+72223695 MS.gene07826:CDS
AACATGTCAAACACACGCCC+TGG 0.573687 8.3:-72222499 None:intergenic
CTCGGCCACTCATGGTGACA+TGG 0.586484 8.3:+72223652 MS.gene07826:CDS
AATAGATGATGCTAGAATGT+TGG 0.588211 8.3:+72223886 MS.gene07826:CDS
CTGCCAGGCAAAATTCAGGT+TGG 0.595132 8.3:+72223362 MS.gene07826:CDS
CCTTGTTGGGGCCAAAACCA+AGG 0.596913 8.3:-72222335 None:intergenic
AAATTGCTTGATACCTTCAA+GGG 0.597265 8.3:-72223480 None:intergenic
GCGGAAAGTGGACTGGCTCA+CGG 0.597521 8.3:+72223601 MS.gene07826:CDS
GAAGAATTCTTGCCCATCAG+TGG 0.598468 8.3:-72221554 None:intergenic
TTGTCCCACCAACACAAGCA+TGG 0.598938 8.3:-72222420 None:intergenic
GATCAGCGCATTCTCCAAGC+TGG 0.599910 8.3:+72222454 MS.gene07826:CDS
CCTGCTGCACATCGATACCA+CGG 0.600509 8.3:-72223754 None:intergenic
GCTGGTGTTCACACTGTCGT+TGG 0.603283 8.3:+72222472 MS.gene07826:CDS
GATACCACGGGCCAAGAGGT+CGG 0.604438 8.3:-72223741 None:intergenic
AAGCAGAGATCATACAGTCT+CGG 0.606411 8.3:+72223634 MS.gene07826:CDS
CTGGTCCATGTCACCATGAG+TGG 0.606697 8.3:-72223657 None:intergenic
CTGCTGCACATCGATACCAC+GGG 0.609965 8.3:-72223753 None:intergenic
ACCACCGACCTCTTGGCCCG+TGG 0.610628 8.3:+72223737 MS.gene07826:CDS
ATGGCAGGTTTGGCTCCAGA+AGG 0.617096 8.3:+72221376 MS.gene07826:CDS
CATCGATACCACGGGCCAAG+AGG 0.618009 8.3:-72223745 None:intergenic
GGCGTGTGTTTGACATGTTG+CGG 0.627441 8.3:+72222503 MS.gene07826:CDS
TCCACCGTATTGGTCGTAGT+GGG 0.634791 8.3:+72223825 MS.gene07826:CDS
GCTAGCTCAACAAATTGAGA+AGG 0.636496 8.3:+72222360 MS.gene07826:CDS
GCCCACTACGACCAATACGG+TGG 0.644384 8.3:-72223826 None:intergenic
GTGTGTTTGACATGTTGCGG+AGG 0.646901 8.3:+72222506 MS.gene07826:CDS
ACACTGTCGTTGGAACTCCA+GGG 0.656152 8.3:+72222482 MS.gene07826:CDS
GAACTTCCTAGTAATCTCAA+GGG 0.668909 8.3:-72223414 None:intergenic
GTAATCTCAAGGGCTTCAGG+TGG 0.671800 8.3:-72223404 None:intergenic
TGACATGGACCAGAACACTA+GGG 0.676762 8.3:+72223667 MS.gene07826:CDS
TGGTGGGACAAGTGTTCGTG+AGG 0.680915 8.3:+72222432 MS.gene07826:CDS
ACCACGGGCCAAGAGGTCGG+TGG 0.685004 8.3:-72223738 None:intergenic
AAGCATGGACCTTAACACCC+AGG 0.689849 8.3:-72222405 None:intergenic
CTGCTGGAAAATCTTCTGCG+AGG 0.693207 8.3:+72221619 MS.gene07826:CDS
ATCATATACTTCATCATACG+AGG 0.700751 8.3:-72221578 None:intergenic
TGATGGCAAGAGTCTCGTAG+AGG 0.710662 8.3:-72223550 None:intergenic
CCTTCTGCGATCCAGCAAAG+GGG 0.714817 8.3:+72222190 MS.gene07826:CDS
GCTGATGAAATGCTTTCACG+TGG 0.720414 8.3:+72222574 MS.gene07826:CDS
ATGATAGCTTTGATGCAATG+GGG 0.761244 8.3:+72221596 MS.gene07826:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG - chr8.3:72222705-72222724 None:intergenic 0.0%
!! AAAAAAAAAAAAAAAAAAAA+GGG - chr8.3:72222705-72222724 None:intergenic 0.0%
!! TATTAAAAAAAATAAGACAT+AGG + chr8.3:72223157-72223176 MS.gene07826:intron 10.0%
!!! TTATTGTTTTGTAATTAAAT+TGG + chr8.3:72221904-72221923 MS.gene07826:intron 10.0%
!!! TTCTTCTTTGTTTTAAATTT+CGG - chr8.3:72223121-72223140 None:intergenic 15.0%
!! AAAAGAGAAAAATAATCATG+CGG - chr8.3:72223184-72223203 None:intergenic 20.0%
!! GTCAAATTACAAGAAAAAAA+AGG - chr8.3:72221507-72221526 None:intergenic 20.0%
!! TATATATTTAAACATGCACA+AGG + chr8.3:72222789-72222808 MS.gene07826:intron 20.0%
!! TGTGTTTCAAAATTATTTAC+CGG + chr8.3:72221965-72221984 MS.gene07826:intron 20.0%
!!! GTTTTGTAATTAAATTGGAA+TGG + chr8.3:72221909-72221928 MS.gene07826:intron 20.0%
! AAGAATAAGCACGTAAAATA+AGG - chr8.3:72221681-72221700 None:intergenic 25.0%
! AAGCACTTTATAATTTGAAC+AGG - chr8.3:72221793-72221812 None:intergenic 25.0%
! ACCACTTTATGAATGAAAAA+TGG - chr8.3:72222827-72222846 None:intergenic 25.0%
! AGAATAAGCACGTAAAATAA+GGG - chr8.3:72221680-72221699 None:intergenic 25.0%
! AGCACTTTATAATTTGAACA+GGG - chr8.3:72221792-72221811 None:intergenic 25.0%
! ATATAAAAGACTCAAACAGA+GGG - chr8.3:72222774-72222793 None:intergenic 25.0%
! ATGAATGAAAAATGGATGAA+AGG - chr8.3:72222819-72222838 None:intergenic 25.0%
! ATGGAATTAGTTAAGTCAAA+AGG - chr8.3:72222637-72222656 None:intergenic 25.0%
! ATTCTACAATGTGATTATAG+AGG + chr8.3:72223922-72223941 MS.gene07826:CDS 25.0%
! TAAAACGTAATATGTTGTTC+TGG + chr8.3:72221879-72221898 MS.gene07826:intron 25.0%
! TATATAAAAGACTCAAACAG+AGG - chr8.3:72222775-72222794 None:intergenic 25.0%
! TTACGTGCTTATTCTTATTA+TGG + chr8.3:72221685-72221704 MS.gene07826:intron 25.0%
! TTGAATGGAAAATTGGAAAA+AGG + chr8.3:72223063-72223082 MS.gene07826:intron 25.0%
!! ACATATTACGTTTTACTAGA+AGG - chr8.3:72221874-72221893 None:intergenic 25.0%
!! ATGGTTTTTGAATGGAAAAT+TGG + chr8.3:72223056-72223075 MS.gene07826:intron 25.0%
!!! ATGTTTTACCTTGTTTTGAA+AGG + chr8.3:72222157-72222176 MS.gene07826:intron 25.0%
!!! TCCATTTTTCATTCATAAAG+TGG + chr8.3:72222823-72222842 MS.gene07826:intron 25.0%
AAAATTGCTTGATACCTTCA+AGG - chr8.3:72223484-72223503 None:intergenic 30.0%
AAATTGCTTGATACCTTCAA+GGG - chr8.3:72223483-72223502 None:intergenic 30.0%
AATAGATGATGCTAGAATGT+TGG + chr8.3:72223886-72223905 MS.gene07826:CDS 30.0%
AATGAGTACATCTTTCATGA+AGG + chr8.3:72222060-72222079 MS.gene07826:intron 30.0%
AGTTTATGTTCCATCTTACA+TGG + chr8.3:72223289-72223308 MS.gene07826:intron 30.0%
ATCATATACTTCATCATACG+AGG - chr8.3:72221581-72221600 None:intergenic 30.0%
CTGGAAGAGAAATGATAAAA+TGG + chr8.3:72221988-72222007 MS.gene07826:intron 30.0%
GAATAAGCACGTAAAATAAG+GGG - chr8.3:72221679-72221698 None:intergenic 30.0%
GAATTAGTTAAGTCAAAAGG+TGG - chr8.3:72222634-72222653 None:intergenic 30.0%
GTGCTTATTCTTATTATGGT+AGG + chr8.3:72221689-72221708 MS.gene07826:intron 30.0%
TATAAAAGACTCAAACAGAG+GGG - chr8.3:72222773-72222792 None:intergenic 30.0%
TCTCAAAACCTTTCAAAACA+AGG - chr8.3:72222168-72222187 None:intergenic 30.0%
TGCATGGTTTCAAAGATAAA+GGG + chr8.3:72223095-72223114 MS.gene07826:intron 30.0%
TTGCATAAAGATGTTTGTTC+TGG + chr8.3:72222546-72222565 MS.gene07826:CDS 30.0%
TTTAGTAAGAATGTCTCATG+CGG + chr8.3:72222735-72222754 MS.gene07826:intron 30.0%
TTTCAAAATTATTTACCGGC+TGG + chr8.3:72221969-72221988 MS.gene07826:intron 30.0%
TTTCATAATGCCATGTAAGA+TGG - chr8.3:72223302-72223321 None:intergenic 30.0%
! ATTTTATGTCAACGTCGATA+AGG + chr8.3:72223499-72223518 MS.gene07826:CDS 30.0%
! GGCATTATGAAAACTTTTGT+TGG + chr8.3:72223310-72223329 MS.gene07826:intron 30.0%
! GTGATTTTGTAAGCACTAAT+AGG - chr8.3:72223018-72223037 None:intergenic 30.0%
! TCAATTAGGACTAGTGTTAA+AGG + chr8.3:72222938-72222957 MS.gene07826:intron 30.0%
!! AAGATTTACACTCTAGAATC+TGG + chr8.3:72221721-72221740 MS.gene07826:intron 30.0%
!! ATATGATAGCTTTGATGCAA+TGG + chr8.3:72221594-72221613 MS.gene07826:CDS 30.0%
!! TATGATAGCTTTGATGCAAT+GGG + chr8.3:72221595-72221614 MS.gene07826:CDS 30.0%
!!! TTGTTTTGAAAGGTTTTGAG+AGG + chr8.3:72222167-72222186 MS.gene07826:intron 30.0%
AAAAATGACACTCTGAGTGA+TGG - chr8.3:72223570-72223589 None:intergenic 35.0%
ACAAATCAGGAGAGATTAAG+GGG + chr8.3:72222985-72223004 MS.gene07826:intron 35.0%
ACGTAAGTTATATATCCCAC+GGG + chr8.3:72222885-72222904 MS.gene07826:intron 35.0%
ACTAGTCCTAATTGAGAACT+CGG - chr8.3:72222933-72222952 None:intergenic 35.0%
ACTAGTGTTAAAGGAAAGCA+TGG + chr8.3:72222947-72222966 MS.gene07826:intron 35.0%
AGCAAATCAGCAACATTTGA+TGG - chr8.3:72223953-72223972 None:intergenic 35.0%
ATAAAAGACTCAAACAGAGG+GGG - chr8.3:72222772-72222791 None:intergenic 35.0%
ATATCATCATGCGTGAGTTT+CGG + chr8.3:72223690-72223709 MS.gene07826:CDS 35.0%
CAATTTCCGAGTTCTCAATT+AGG + chr8.3:72222924-72222943 MS.gene07826:intron 35.0%
CACAAATCAGGAGAGATTAA+GGG + chr8.3:72222984-72223003 MS.gene07826:intron 35.0%
CATAAACTTTCAGCTAGACA+TGG - chr8.3:72223277-72223296 None:intergenic 35.0%
CCATTCAAAAACCATTGACA+TGG - chr8.3:72223051-72223070 None:intergenic 35.0%
CTAATTGAGAACTCGGAAAT+TGG - chr8.3:72222926-72222945 None:intergenic 35.0%
CTTACAAAATCACCCATTAG+TGG + chr8.3:72223025-72223044 MS.gene07826:intron 35.0%
GAACTTCCTAGTAATCTCAA+GGG - chr8.3:72223417-72223436 None:intergenic 35.0%
GACACTGTGTTTACAAACAA+TGG - chr8.3:72222656-72222675 None:intergenic 35.0%
GACGTAAGTTATATATCCCA+CGG + chr8.3:72222884-72222903 MS.gene07826:intron 35.0%
GTCTTGTACATTAACTTCAC+AGG + chr8.3:72221527-72221546 MS.gene07826:intron 35.0%
GTGCATGGTTTCAAAGATAA+AGG + chr8.3:72223094-72223113 MS.gene07826:intron 35.0%
TATATGCTTACGGTATGTAC+TGG + chr8.3:72221644-72221663 MS.gene07826:intron 35.0%
TCACAAATCAGGAGAGATTA+AGG + chr8.3:72222983-72223002 MS.gene07826:intron 35.0%
TGAACTTCCTAGTAATCTCA+AGG - chr8.3:72223418-72223437 None:intergenic 35.0%
TTCATGATAACTGTAGCAAC+TGG - chr8.3:72222125-72222144 None:intergenic 35.0%
TTTATCATTTCTCTTCCAGC+CGG - chr8.3:72221987-72222006 None:intergenic 35.0%
! ATTTTGCAGCAGCTTGATTA+TGG + chr8.3:72222295-72222314 MS.gene07826:CDS 35.0%
! CCATGTCAATGGTTTTTGAA+TGG + chr8.3:72223048-72223067 MS.gene07826:intron 35.0%
! CTAGTGTTAAAGGAAAGCAT+GGG + chr8.3:72222948-72222967 MS.gene07826:intron 35.0%
! GAAGGCATAAATCACAAATC+AGG + chr8.3:72222972-72222991 MS.gene07826:intron 35.0%
!! ATGATAGCTTTGATGCAATG+GGG + chr8.3:72221596-72221615 MS.gene07826:CDS 35.0%
!! TATCTTTGAAACCATGCACA+CGG - chr8.3:72223093-72223112 None:intergenic 35.0%
!! TCATTTTTGTGAATACCAGG+CGG + chr8.3:72223582-72223601 MS.gene07826:CDS 35.0%
!! TTACACTCTAGAATCTGGAT+TGG + chr8.3:72221726-72221745 MS.gene07826:intron 35.0%
!!! AGATAGTTTTCAGGTTGAGT+TGG - chr8.3:72223806-72223825 None:intergenic 35.0%
!!! GATAGTTTTCAGGTTGAGTT+GGG - chr8.3:72223805-72223824 None:intergenic 35.0%
!!! GTGTCATTTTTGTGAATACC+AGG + chr8.3:72223579-72223598 MS.gene07826:CDS 35.0%
AAAAAGGAAAACCGTGTGCA+TGG + chr8.3:72223079-72223098 MS.gene07826:intron 40.0%
AAGCAGAGATCATACAGTCT+CGG + chr8.3:72223634-72223653 MS.gene07826:CDS 40.0%
AATGCTTTCACGTGGTTTCA+AGG + chr8.3:72222582-72222601 MS.gene07826:CDS 40.0%
ATTGAGAACTCGGAAATTGG+AGG - chr8.3:72222923-72222942 None:intergenic 40.0%
CGTAAGTTATATATCCCACG+GGG + chr8.3:72222886-72222905 MS.gene07826:intron 40.0%
GAAAACTATCTCCACCGTAT+TGG + chr8.3:72223815-72223834 MS.gene07826:CDS 40.0%
GCATCAAATTGTGATCCTTC+TGG - chr8.3:72221394-72221413 None:intergenic 40.0%
GCTAGCTCAACAAATTGAGA+AGG + chr8.3:72222360-72222379 MS.gene07826:CDS 40.0%
GGAATTGTTCCTTTCTGCAA+AGG + chr8.3:72222211-72222230 MS.gene07826:CDS 40.0%
GTAGCAATGTGTCTGTTACA+TGG + chr8.3:72222845-72222864 MS.gene07826:intron 40.0%
TCAACGTCGATAAGGAAGAA+TGG + chr8.3:72223507-72223526 MS.gene07826:CDS 40.0%
TGATGATATCCCTAGTGTTC+TGG - chr8.3:72223679-72223698 None:intergenic 40.0%
TGTTTGTAAACACAGTGTCG+TGG + chr8.3:72222657-72222676 MS.gene07826:intron 40.0%
TTGAGAACTCGGAAATTGGA+GGG - chr8.3:72222922-72222941 None:intergenic 40.0%
! ATACGGTGGAGATAGTTTTC+AGG - chr8.3:72223815-72223834 None:intergenic 40.0%
! TTAAAGGAAAGCATGGGAGA+AGG + chr8.3:72222954-72222973 MS.gene07826:intron 40.0%
!! TTATGGATTAGTTCAGTGCC+AGG + chr8.3:72222312-72222331 MS.gene07826:CDS 40.0%
AACACAGTGTCGTGGTAGTT+TGG + chr8.3:72222665-72222684 MS.gene07826:intron 45.0%
AAGACAGCAACATTCTGCTC+TGG + chr8.3:72222271-72222290 MS.gene07826:CDS 45.0%
AAGGAACAATTCCCCTTTGC+TGG - chr8.3:72222204-72222223 None:intergenic 45.0%
ACATCCAGACCTTTGCAGAA+AGG - chr8.3:72222223-72222242 None:intergenic 45.0%
ACCATTGACATGGCCACTAA+TGG - chr8.3:72223041-72223060 None:intergenic 45.0%
AGGTCTGGATGTGATTCAAC+AGG + chr8.3:72222231-72222250 MS.gene07826:CDS 45.0%
CCATTGACATGGCCACTAAT+GGG - chr8.3:72223040-72223059 None:intergenic 45.0%
CGCTTTATGAGGATTCTCAC+TGG - chr8.3:72223449-72223468 None:intergenic 45.0%
CTAGTAATCTCAAGGGCTTC+AGG - chr8.3:72223410-72223429 None:intergenic 45.0%
CTGAAGCCCTTGAGATTACT+AGG + chr8.3:72223408-72223427 MS.gene07826:CDS 45.0%
CTGCGAGGCATATATGCTTA+CGG + chr8.3:72221634-72221653 MS.gene07826:CDS 45.0%
GAAGAATTCTTGCCCATCAG+TGG - chr8.3:72221557-72221576 None:intergenic 45.0%
GCTGATGAAATGCTTTCACG+TGG + chr8.3:72222574-72222593 MS.gene07826:CDS 45.0%
GTTAAGGTCCATGCTTGTGT+TGG + chr8.3:72222412-72222431 MS.gene07826:CDS 45.0%
TATGAGAACTCGAGAAGAGC+CGG - chr8.3:72223717-72223736 None:intergenic 45.0%
TGACATGGACCAGAACACTA+GGG + chr8.3:72223667-72223686 MS.gene07826:CDS 45.0%
TGGTGATTTCCTGGGTGTTA+AGG + chr8.3:72222396-72222415 MS.gene07826:CDS 45.0%
TGTTCCTTTCTGCAAAGGTC+TGG + chr8.3:72222216-72222235 MS.gene07826:CDS 45.0%
TTCACGTGGTTTCAAGGATC+AGG + chr8.3:72222588-72222607 MS.gene07826:CDS 45.0%
! ACTCCAACCTGAATTTTGCC+TGG - chr8.3:72223368-72223387 None:intergenic 45.0%
AACATGTCAAACACACGCCC+TGG - chr8.3:72222502-72222521 None:intergenic 50.0%
AAGCATGGACCTTAACACCC+AGG - chr8.3:72222408-72222427 None:intergenic 50.0%
AAGGTCCATGCTTGTGTTGG+TGG + chr8.3:72222415-72222434 MS.gene07826:CDS 50.0%
ACACTGTCGTTGGAACTCCA+GGG + chr8.3:72222482-72222501 MS.gene07826:CDS 50.0%
ATCATGCGTGAGTTTCGGTC+CGG + chr8.3:72223695-72223714 MS.gene07826:CDS 50.0%
ATCGCCCACTACGACCAATA+CGG - chr8.3:72223832-72223851 None:intergenic 50.0%
ATTAGTTCAGTGCCAGGCCT+TGG + chr8.3:72222318-72222337 MS.gene07826:CDS 50.0%
CCCATTAGTGGCCATGTCAA+TGG + chr8.3:72223037-72223056 MS.gene07826:intron 50.0%
CTGCCAGGCAAAATTCAGGT+TGG + chr8.3:72223362-72223381 MS.gene07826:CDS 50.0%
CTGCTGGAAAATCTTCTGCG+AGG + chr8.3:72221619-72221638 MS.gene07826:CDS 50.0%
GAGAAGGTTATGCGAGCACT+TGG + chr8.3:72222376-72222395 MS.gene07826:CDS 50.0%
GCAACTGCCAGGCAAAATTC+AGG + chr8.3:72223358-72223377 MS.gene07826:CDS 50.0%
GGCGTGTGTTTGACATGTTG+CGG + chr8.3:72222503-72222522 MS.gene07826:CDS 50.0%
GTAATCTCAAGGGCTTCAGG+TGG - chr8.3:72223407-72223426 None:intergenic 50.0%
GTGACATGGACCAGAACACT+AGG + chr8.3:72223666-72223685 MS.gene07826:CDS 50.0%
GTGATTCAACAGGCTCAGTC+TGG + chr8.3:72222241-72222260 MS.gene07826:CDS 50.0%
GTGTGTTTGACATGTTGCGG+AGG + chr8.3:72222506-72222525 MS.gene07826:CDS 50.0%
GTTGAGCTAGCTCCCTTGTT+GGG - chr8.3:72222351-72222370 None:intergenic 50.0%
TCAGCTCGTCACGCTTTATG+AGG - chr8.3:72223460-72223479 None:intergenic 50.0%
TCTCATAACCACCGACCTCT+TGG + chr8.3:72223730-72223749 MS.gene07826:CDS 50.0%
TGATGGCAAGAGTCTCGTAG+AGG - chr8.3:72223553-72223572 None:intergenic 50.0%
TGTGAATACCAGGCGGAAAG+TGG + chr8.3:72223589-72223608 MS.gene07826:CDS 50.0%
TGTTGAGCTAGCTCCCTTGT+TGG - chr8.3:72222352-72222371 None:intergenic 50.0%
TTCACAGGCTTGCCACTGAT+GGG + chr8.3:72221542-72221561 MS.gene07826:intron 50.0%
TTGAGCTAGCTCCCTTGTTG+GGG - chr8.3:72222350-72222369 None:intergenic 50.0%
TTGTCCCACCAACACAAGCA+TGG - chr8.3:72222423-72222442 None:intergenic 50.0%
! AACAGGCTCAGTCTGGAACT+GGG + chr8.3:72222248-72222267 MS.gene07826:CDS 50.0%
! AGGTCCATGCTTGTGTTGGT+GGG + chr8.3:72222416-72222435 MS.gene07826:CDS 50.0%
! AGTGGGCGATTCGGAAGAAA+AGG + chr8.3:72223842-72223861 MS.gene07826:CDS 50.0%
! CGAGCACTTGGTGATTTCCT+GGG + chr8.3:72222388-72222407 MS.gene07826:CDS 50.0%
! CGTGGTAGTTTGGTGAAGCA+TGG + chr8.3:72222675-72222694 MS.gene07826:intron 50.0%
! GAATTTTGCCTGGCAGTTGC+TGG - chr8.3:72223358-72223377 None:intergenic 50.0%
! GACATTTTCCAGCAACTGCC+AGG + chr8.3:72223347-72223366 MS.gene07826:CDS 50.0%
! TCCACCGTATTGGTCGTAGT+GGG + chr8.3:72223825-72223844 MS.gene07826:CDS 50.0%
!! ATTGGTCGTAGTGGGCGATT+CGG + chr8.3:72223833-72223852 MS.gene07826:CDS 50.0%
!!! CTTGGTTTTGGCCCCAACAA+GGG + chr8.3:72222336-72222355 MS.gene07826:CDS 50.0%
AGGGTAATGCAAGTCCCCGT+GGG - chr8.3:72222903-72222922 None:intergenic 55.0%
ATACCAGGCGGAAAGTGGAC+TGG + chr8.3:72223594-72223613 MS.gene07826:CDS 55.0%
CACACTGTCGTTGGAACTCC+AGG + chr8.3:72222481-72222500 MS.gene07826:CDS 55.0%
CATACAGTCTCGGCCACTCA+TGG + chr8.3:72223644-72223663 MS.gene07826:CDS 55.0%
CCTGCTGCACATCGATACCA+CGG - chr8.3:72223757-72223776 None:intergenic 55.0%
CCTTCTGCGATCCAGCAAAG+GGG + chr8.3:72222190-72222209 MS.gene07826:CDS 55.0%
CCTTGTTGGGGCCAAAACCA+AGG - chr8.3:72222338-72222357 None:intergenic 55.0%
CGACAGTGTGAACACCAGCT+TGG - chr8.3:72222471-72222490 None:intergenic 55.0%
CGATGTGCAGCAGGTGTCTT+TGG + chr8.3:72223763-72223782 MS.gene07826:CDS 55.0%
CTGCTGCACATCGATACCAC+GGG - chr8.3:72223756-72223775 None:intergenic 55.0%
CTGGTCCATGTCACCATGAG+TGG - chr8.3:72223660-72223679 None:intergenic 55.0%
CTTCACAGGCTTGCCACTGA+TGG + chr8.3:72221541-72221560 MS.gene07826:intron 55.0%
CTTTGATGCAATGGGGCTGC+TGG + chr8.3:72221603-72221622 MS.gene07826:CDS 55.0%
GATCAGCGCATTCTCCAAGC+TGG + chr8.3:72222454-72222473 MS.gene07826:CDS 55.0%
GCCTTCTGCGATCCAGCAAA+GGG + chr8.3:72222189-72222208 MS.gene07826:CDS 55.0%
GCTGGTGTTCACACTGTCGT+TGG + chr8.3:72222472-72222491 MS.gene07826:CDS 55.0%
TGGTGGGACAAGTGTTCGTG+AGG + chr8.3:72222432-72222451 MS.gene07826:CDS 55.0%
! ATGGCAGGTTTGGCTCCAGA+AGG + chr8.3:72221376-72221395 MS.gene07826:CDS 55.0%
! CAACAGGCTCAGTCTGGAAC+TGG + chr8.3:72222247-72222266 MS.gene07826:CDS 55.0%
! CTCCACCGTATTGGTCGTAG+TGG + chr8.3:72223824-72223843 MS.gene07826:CDS 55.0%
! GCGAGCACTTGGTGATTTCC+TGG + chr8.3:72222387-72222406 MS.gene07826:CDS 55.0%
! TCAGTGCCAGGCCTTGGTTT+TGG + chr8.3:72222324-72222343 MS.gene07826:CDS 55.0%
!!! CCTTGGTTTTGGCCCCAACA+AGG + chr8.3:72222335-72222354 MS.gene07826:CDS 55.0%
CATCGATACCACGGGCCAAG+AGG - chr8.3:72223748-72223767 None:intergenic 60.0%
CCCCTTTGCTGGATCGCAGA+AGG - chr8.3:72222193-72222212 None:intergenic 60.0%
CGTGACGAGCTGACCCTTGA+AGG + chr8.3:72223467-72223486 MS.gene07826:CDS 60.0%
CTCGGCCACTCATGGTGACA+TGG + chr8.3:72223652-72223671 MS.gene07826:CDS 60.0%
GAGGGTAATGCAAGTCCCCG+TGG - chr8.3:72222904-72222923 None:intergenic 60.0%
GATACCACGGGCCAAGAGGT+CGG - chr8.3:72223744-72223763 None:intergenic 60.0%
GCCCACTACGACCAATACGG+TGG - chr8.3:72223829-72223848 None:intergenic 60.0%
GGCCTTCTGCGATCCAGCAA+AGG + chr8.3:72222188-72222207 MS.gene07826:CDS 60.0%
TTGGGGCCAAAACCAAGGCC+TGG - chr8.3:72222333-72222352 None:intergenic 60.0%
!! CCGTGGTATCGATGTGCAGC+AGG + chr8.3:72223754-72223773 MS.gene07826:CDS 60.0%
!! GCGGAAAGTGGACTGGCTCA+CGG + chr8.3:72223601-72223620 MS.gene07826:CDS 60.0%
GAGCCAGTCCACTTTCCGCC+TGG - chr8.3:72223600-72223619 None:intergenic 65.0%
ACCACCGACCTCTTGGCCCG+TGG + chr8.3:72223737-72223756 MS.gene07826:CDS 70.0%
ACCACGGGCCAAGAGGTCGG+TGG - chr8.3:72223741-72223760 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 72221376 72223976 72221376 ID=MS.gene07826
chr8.3 mRNA 72221376 72223976 72221376 ID=MS.gene07826.t1;Parent=MS.gene07826
chr8.3 exon 72221376 72221443 72221376 ID=MS.gene07826.t1.exon1;Parent=MS.gene07826.t1
chr8.3 CDS 72221376 72221443 72221376 ID=cds.MS.gene07826.t1;Parent=MS.gene07826.t1
chr8.3 exon 72221549 72221655 72221549 ID=MS.gene07826.t1.exon2;Parent=MS.gene07826.t1
chr8.3 CDS 72221549 72221655 72221549 ID=cds.MS.gene07826.t1;Parent=MS.gene07826.t1
chr8.3 exon 72222179 72222609 72222179 ID=MS.gene07826.t1.exon3;Parent=MS.gene07826.t1
chr8.3 CDS 72222179 72222609 72222179 ID=cds.MS.gene07826.t1;Parent=MS.gene07826.t1
chr8.3 exon 72223341 72223976 72223341 ID=MS.gene07826.t1.exon4;Parent=MS.gene07826.t1
chr8.3 CDS 72223341 72223976 72223341 ID=cds.MS.gene07826.t1;Parent=MS.gene07826.t1
Gene Sequence

>MS.gene07826

ATGGCAGGTTTGGCTCCAGAAGGATCACAATTTGATGCTAATCATTATGACTCTAAGATGAATGAACTGTTTGTTTCTGTGCTTCATATTCTTCACTGTTAATTCTGATTGAATTTGTTATTCATGTACCTTTTTTTTCTTGTAATTTGACGTCTTGTACATTAACTTCACAGGCTTGCCACTGATGGGCAAGAATTCTTCACCTCGTATGATGAAGTATATGATAGCTTTGATGCAATGGGGCTGCTGGAAAATCTTCTGCGAGGCATATATGCTTACGGTATGTACTGGAAAATTGATCCCCTTATTTTACGTGCTTATTCTTATTATGGTAGGTCAGTAAGCAAGATTTACACTCTAGAATCTGGATTGGATCTAATGTGTTTTGAATTTTGATATATTTGATGTATTCTCCCTGTTCAAATTATAAAGTGCTTATAATATATTGATGCAATCAACTCTTCAAGATCTTTTGACAAAAATTTAATACTAATTCCTTCTAGTAAAACGTAATATGTTGTTCTGGATTTATTGTTTTGTAATTAAATTGGAATGGTAATGTGATTGAATCAATTATTTTAGATATAACTGTGTTTCAAAATTATTTACCGGCTGGAAGAGAAATGATAAAATGGACAAATGTGATTGAATCAAATAGTTTTCTAAATTTTTTAATGTTTTAAAAATGAGTACATCTTTCATGAAGGCATCAATAATATATATGTTAAAAATAAACATTACTCTCGCCAGTTGCTACAGTTATCATGAAATCACGTGTGTCATGTTTTACCTTGTTTTGAAAGGTTTTGAGAGGCCTTCTGCGATCCAGCAAAGGGGAATTGTTCCTTTCTGCAAAGGTCTGGATGTGATTCAACAGGCTCAGTCTGGAACTGGGAAGACAGCAACATTCTGCTCTGGAATTTTGCAGCAGCTTGATTATGGATTAGTTCAGTGCCAGGCCTTGGTTTTGGCCCCAACAAGGGAGCTAGCTCAACAAATTGAGAAGGTTATGCGAGCACTTGGTGATTTCCTGGGTGTTAAGGTCCATGCTTGTGTTGGTGGGACAAGTGTTCGTGAGGATCAGCGCATTCTCCAAGCTGGTGTTCACACTGTCGTTGGAACTCCAGGGCGTGTGTTTGACATGTTGCGGAGGCAGTCTCTACGCTCAGATTGCATAAAGATGTTTGTTCTGGATGAAGCTGATGAAATGCTTTCACGTGGTTTCAAGGATCAGGTTCGTCGATATGCTCATTTTCCACCTTTTGACTTAACTAATTCCATTGTTTGTAAACACAGTGTCGTGGTAGTTTGGTGAAGCATGGATTTCCCTTTTTTTTTTTTTTTTTTTTTTATTTTTTATTTAGTAAGAATGTCTCATGCGGTTCTTTATCTTCCCCCTCTGTTTGAGTCTTTTATATATTTAAACATGCACAAGGTTTTCCTTTCATCCATTTTTCATTCATAAAGTGGTAGCAATGTGTCTGTTACATGGACGAGTCAGCTGTAACGACGTAAGTTATATATCCCACGGGGACTTGCATTACCCTCCAATTTCCGAGTTCTCAATTAGGACTAGTGTTAAAGGAAAGCATGGGAGAAGGCATAAATCACAAATCAGGAGAGATTAAGGGGCTATTATCCTATTAGTGCTTACAAAATCACCCATTAGTGGCCATGTCAATGGTTTTTGAATGGAAAATTGGAAAAAGGAAAACCGTGTGCATGGTTTCAAAGATAAAGGGCCGAAATTTAAAACAAAGAAGAAAAAAAGACTAACTTGTTATTAAAAAAAATAAGACATAGGACCGCATGATTATTTTTCTCTTTTCTTTATTCATTCATTCATTTATTTATAAAATGCAAAAGAAGTGTGCTTTATTAACTGAATCTTAATGCAGCCATGTCTAGCTGAAAGTTTATGTTCCATCTTACATGGCATTATGAAAACTTTTGTTGGTGTTGCAGATCTATGACATTTTCCAGCAACTGCCAGGCAAAATTCAGGTTGGAGTATTTTCTGCTACAATGCCACCTGAAGCCCTTGAGATTACTAGGAAGTTCATGAATAAGCCAGTGAGAATCCTCATAAAGCGTGACGAGCTGACCCTTGAAGGTATCAAGCAATTTTATGTCAACGTCGATAAGGAAGAATGGAAGCTTGAGACATTATGCGACCTCTACGAGACTCTTGCCATCACTCAGAGTGTCATTTTTGTGAATACCAGGCGGAAAGTGGACTGGCTCACGGATAAGATGCGAAGCAGAGATCATACAGTCTCGGCCACTCATGGTGACATGGACCAGAACACTAGGGATATCATCATGCGTGAGTTTCGGTCCGGCTCTTCTCGAGTTCTCATAACCACCGACCTCTTGGCCCGTGGTATCGATGTGCAGCAGGTGTCTTTGGTCATAAACTATGATCTCCCAACTCAACCTGAAAACTATCTCCACCGTATTGGTCGTAGTGGGCGATTCGGAAGAAAAGGTGTTTCTATTAACTTTGTGACAATAGATGATGCTAGAATGTTGGCTGATATTCAGAAATTCTACAATGTGATTATAGAGGAGCTGCCATCAAATGTTGCTGATTTGCTCTGA
Protein sequence

>MS.gene07826.t1

MAGLAPEGSQFDANHYDSKMNELLATDGQEFFTSYDEVYDSFDAMGLLENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDFLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQQLPGKIQVGVFSATMPPEALEITRKFMNKPVRILIKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTIDDARMLADIQKFYNVIIEELPSNVADLL