Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08537.t1 | XP_013446579.1 | 96 | 349 | 7 | 1 | 1 | 342 | 1 | 349 | 8.00E-170 | 606.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08537.t1 | Q9BQ67 | 42.4 | 370 | 197 | 9 | 31 | 392 | 29 | 390 | 2.4e-66 | 254.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08537.t1 | A0A072TTT6 | 96.0 | 349 | 7 | 1 | 1 | 342 | 1 | 349 | 5.7e-170 | 606.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene08537 | 0.805539 | 1.27E-49 | -1.69E-46 |
| MS.gene049255 | MS.gene08537 | 0.80823 | 3.43E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene08537 | 0.828052 | 1.11E-54 | -1.69E-46 |
| MS.gene050277 | MS.gene08537 | 0.835464 | 1.65E-56 | -1.69E-46 |
| MS.gene050877 | MS.gene08537 | 0.839857 | 1.23E-57 | -1.69E-46 |
| MS.gene050916 | MS.gene08537 | 0.830234 | 3.29E-55 | -1.69E-46 |
| MS.gene051791 | MS.gene08537 | 0.821533 | 3.84E-53 | -1.69E-46 |
| MS.gene052947 | MS.gene08537 | 0.818874 | 1.56E-52 | -1.69E-46 |
| MS.gene053122 | MS.gene08537 | 0.80519 | 1.50E-49 | -1.69E-46 |
| MS.gene055808 | MS.gene08537 | 0.840381 | 9.00E-58 | -1.69E-46 |
| MS.gene056257 | MS.gene08537 | 0.820323 | 7.29E-53 | -1.69E-46 |
| MS.gene056631 | MS.gene08537 | 0.809983 | 1.44E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene08537 | 0.847231 | 1.32E-59 | -1.69E-46 |
| MS.gene058030 | MS.gene08537 | 0.827725 | 1.34E-54 | -1.69E-46 |
| MS.gene05978 | MS.gene08537 | 0.832204 | 1.08E-55 | -1.69E-46 |
| MS.gene06001 | MS.gene08537 | 0.815261 | 1.01E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene08537 | 0.801588 | 8.39E-49 | -1.69E-46 |
| MS.gene060830 | MS.gene08537 | 0.800875 | 1.17E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27317 | MS.gene08537 | PPI |
| MS.gene07852 | MS.gene08537 | PPI |
| MS.gene53345 | MS.gene08537 | PPI |
| MS.gene053297 | MS.gene08537 | PPI |
| MS.gene08537 | MS.gene24284 | PPI |
| MS.gene26959 | MS.gene08537 | PPI |
| MS.gene011268 | MS.gene08537 | PPI |
| MS.gene052717 | MS.gene08537 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08537.t1 | MTR_8g080700 | 96.594 | 411 | 6 | 2 | 1 | 404 | 1 | 410 | 0.0 | 808 |
| MS.gene08537.t1 | MTR_5g024090 | 74.217 | 415 | 86 | 9 | 1 | 404 | 1 | 405 | 0.0 | 568 |
| MS.gene08537.t1 | MTR_2g039250 | 32.806 | 253 | 138 | 9 | 156 | 384 | 159 | 403 | 7.65e-25 | 106 |
| MS.gene08537.t1 | MTR_4g096880 | 27.913 | 369 | 202 | 13 | 52 | 396 | 29 | 357 | 1.51e-24 | 104 |
| MS.gene08537.t1 | MTR_4g073080 | 30.769 | 247 | 147 | 8 | 154 | 396 | 113 | 339 | 1.95e-22 | 98.6 |
| MS.gene08537.t1 | MTR_2g100090 | 27.820 | 266 | 143 | 9 | 156 | 384 | 118 | 371 | 2.27e-19 | 90.1 |
| MS.gene08537.t1 | MTR_2g016160 | 27.957 | 186 | 114 | 7 | 209 | 388 | 99 | 270 | 2.06e-14 | 73.9 |
| MS.gene08537.t1 | MTR_1g054300 | 33.548 | 155 | 91 | 7 | 229 | 383 | 339 | 481 | 9.45e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08537.t1 | AT2G19540 | 67.519 | 391 | 115 | 5 | 23 | 403 | 20 | 408 | 0.0 | 517 |
| MS.gene08537.t1 | AT5G58230 | 28.455 | 369 | 200 | 13 | 52 | 396 | 29 | 357 | 6.26e-26 | 108 |
| MS.gene08537.t1 | AT2G16780 | 28.514 | 249 | 162 | 5 | 154 | 400 | 115 | 349 | 1.21e-25 | 107 |
| MS.gene08537.t1 | AT4G35050 | 28.514 | 249 | 162 | 6 | 154 | 400 | 116 | 350 | 1.37e-24 | 105 |
| MS.gene08537.t1 | AT4G29730 | 28.889 | 270 | 154 | 8 | 156 | 395 | 145 | 406 | 1.81e-22 | 99.4 |
| MS.gene08537.t1 | AT4G29730 | 28.889 | 270 | 154 | 8 | 156 | 395 | 145 | 406 | 1.81e-22 | 99.4 |
| MS.gene08537.t1 | AT2G19520 | 30.502 | 259 | 142 | 8 | 156 | 384 | 165 | 415 | 2.57e-22 | 99.4 |
| MS.gene08537.t1 | AT4G29730 | 28.889 | 270 | 154 | 8 | 156 | 395 | 145 | 406 | 3.18e-22 | 99.0 |
| MS.gene08537.t1 | AT1G29260 | 27.957 | 186 | 114 | 7 | 209 | 388 | 98 | 269 | 7.64e-13 | 69.3 |
| MS.gene08537.t1 | AT4G34460 | 26.230 | 183 | 130 | 4 | 208 | 387 | 141 | 321 | 1.98e-11 | 65.5 |
| MS.gene08537.t1 | AT4G34460 | 26.230 | 183 | 130 | 4 | 208 | 387 | 146 | 326 | 2.01e-11 | 65.5 |
| MS.gene08537.t1 | AT4G34460 | 26.230 | 183 | 130 | 4 | 208 | 387 | 146 | 326 | 2.34e-11 | 65.5 |
| MS.gene08537.t1 | AT4G34460 | 26.230 | 183 | 130 | 4 | 208 | 387 | 84 | 264 | 3.08e-11 | 64.3 |
Find 103 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAAGTATCCAATATTTC+TGG | 0.186014 | 4.2:+14010929 | MS.gene08537:CDS |
| CAGAATATGGGACCTTTCTT+TGG | 0.220480 | 4.2:+14014306 | MS.gene08537:intron |
| ATATTGGATGGCCTTGTCTT+AGG | 0.248468 | 4.2:+14009866 | MS.gene08537:CDS |
| AAATCTTCTTGGAATTCTAT+TGG | 0.257950 | 4.2:+14010902 | MS.gene08537:CDS |
| TCAGGAGCGTTACTTGTTCT+TGG | 0.258707 | 4.2:-14014369 | None:intergenic |
| CTGCCCAAGATGCACATATA+TGG | 0.270395 | 4.2:-14011237 | None:intergenic |
| TGGATAAAAGCATTGCAATA+TGG | 0.287928 | 4.2:+14013250 | MS.gene08537:CDS |
| CACACAGTGTATTTCATTAC+AGG | 0.300493 | 4.2:+14010488 | MS.gene08537:CDS |
| TGCAATATGGGATACTCGTT+TGG | 0.310651 | 4.2:+14013263 | MS.gene08537:CDS |
| AATCTTCTTGGAATTCTATT+GGG | 0.321921 | 4.2:+14010903 | MS.gene08537:CDS |
| GGCGGCGGCGCCACAGGTTC+CGG | 0.327760 | 4.2:+14009753 | MS.gene08537:CDS |
| CTGTCAGTATGTCCAGTAAA+AGG | 0.330541 | 4.2:-14013046 | None:intergenic |
| GACATGAGCTCTCATCTTAA+TGG | 0.333584 | 4.2:+14012721 | MS.gene08537:CDS |
| GACTGGAGTCCTCTTGTTCC+AGG | 0.347996 | 4.2:+14012838 | MS.gene08537:CDS |
| GCAATATGGGATACTCGTTT+GGG | 0.354043 | 4.2:+14013264 | MS.gene08537:CDS |
| TGCCGGTGGTCCTACTTTGC+AGG | 0.355683 | 4.2:+14011054 | MS.gene08537:CDS |
| ACGTCTCTTCCCAGAAATAT+TGG | 0.357236 | 4.2:-14010939 | None:intergenic |
| TTCGGCGGCGGCGGCGCCAC+AGG | 0.362085 | 4.2:+14009747 | MS.gene08537:CDS |
| CCAAGGAGTTGATGCAGTTC+AGG | 0.373931 | 4.2:+14012771 | MS.gene08537:CDS |
| CAGGAGCGTTACTTGTTCTT+GGG | 0.378959 | 4.2:-14014368 | None:intergenic |
| CCCAGGCTGAGAAATCTTCT+TGG | 0.387294 | 4.2:+14010891 | MS.gene08537:intron |
| TGAAACTGATGACTCTGAAA+TGG | 0.392830 | 4.2:+14010979 | MS.gene08537:CDS |
| ATCAACTCCTTGGACACCTT+CGG | 0.400128 | 4.2:-14012761 | None:intergenic |
| TCGTGATCTCAGACTGCTTA+AGG | 0.409527 | 4.2:+14013488 | MS.gene08537:CDS |
| GAGTCATCAGTTTCACGTTT+AGG | 0.409980 | 4.2:-14010971 | None:intergenic |
| GGATAAAAGCATTGCAATAT+GGG | 0.421297 | 4.2:+14013251 | MS.gene08537:CDS |
| ATGGGACCTTTCTTTGGAAA+AGG | 0.423598 | 4.2:+14014312 | MS.gene08537:CDS |
| TGCCCAAGATGCACATATAT+GGG | 0.425064 | 4.2:-14011236 | None:intergenic |
| TGTGCATCTTGGGCAGAATC+TGG | 0.430129 | 4.2:+14011244 | MS.gene08537:CDS |
| GGCTAGTTGTATGTTGGCGT+CGG | 0.431422 | 4.2:+14013440 | MS.gene08537:CDS |
| TCCCCATATATGTGCATCTT+GGG | 0.431645 | 4.2:+14011234 | MS.gene08537:CDS |
| TTTGTGCCATGGAGCGTATC+CGG | 0.432906 | 4.2:-14011210 | None:intergenic |
| TGAATCATCTTCGGCGGCGG+CGG | 0.433527 | 4.2:+14009738 | MS.gene08537:CDS |
| TCACGAAGGGTTGTATTAAC+CGG | 0.436353 | 4.2:+14011191 | MS.gene08537:intron |
| TTAAAGTATCCAATATTTCT+GGG | 0.447355 | 4.2:+14010930 | MS.gene08537:CDS |
| TCCACACGAAGCTTCTTCAT+TGG | 0.452856 | 4.2:+14014048 | MS.gene08537:CDS |
| ATCCCCATATATGTGCATCT+TGG | 0.460743 | 4.2:+14011233 | MS.gene08537:CDS |
| CCTGAACTGCATCAACTCCT+TGG | 0.464940 | 4.2:-14012771 | None:intergenic |
| TGGATGTGATTGGATGCTTA+TGG | 0.478480 | 4.2:-14014015 | None:intergenic |
| TTTGGAAAAGGACGAGGAAG+AGG | 0.483191 | 4.2:+14014324 | MS.gene08537:CDS |
| GCTAGTTGTATGTTGGCGTC+GGG | 0.490510 | 4.2:+14013441 | MS.gene08537:CDS |
| TTGGCGTCGGGTAGTGATGA+TGG | 0.493276 | 4.2:+14013453 | MS.gene08537:CDS |
| ATGAAGGCTATGCTATAGAC+TGG | 0.496426 | 4.2:+14012821 | MS.gene08537:CDS |
| CCGGTAAAAGTGTGGCAACC+TGG | 0.501960 | 4.2:+14009772 | MS.gene08537:CDS |
| TGAATGTATTGTCATGGAAC+AGG | 0.507712 | 4.2:+14013328 | MS.gene08537:CDS |
| AATCCTTTGCCACAGAATAT+GGG | 0.508159 | 4.2:+14014294 | MS.gene08537:intron |
| CTCCACTCAATGGATGTGAT+TGG | 0.514101 | 4.2:-14014025 | None:intergenic |
| GTTCCAGGGAGGCTTGTATC+CGG | 0.514187 | 4.2:+14012853 | MS.gene08537:CDS |
| GGCAGAATCTGGTCATGTGC+AGG | 0.520350 | 4.2:+14011255 | MS.gene08537:CDS |
| CCTTTCTTTGGAAAAGGACG+AGG | 0.522730 | 4.2:+14014318 | MS.gene08537:CDS |
| TTCTGGGAAGAGACGTGAGC+TGG | 0.529788 | 4.2:+14010946 | MS.gene08537:CDS |
| GAAACGGAGTGAATCATCTT+CGG | 0.530490 | 4.2:+14009729 | MS.gene08537:intron |
| GACGAAGAAGAAGGTGGTGC+CGG | 0.530693 | 4.2:+14011037 | MS.gene08537:CDS |
| CGGCATAAAACATCGTCAAA+AGG | 0.531323 | 4.2:+14009582 | MS.gene08537:CDS |
| GATAGTGAAGACGAAGAAGA+AGG | 0.533242 | 4.2:+14011028 | MS.gene08537:CDS |
| GAGGGTGTTACCTGCAAAGT+AGG | 0.537218 | 4.2:-14011064 | None:intergenic |
| GCAACCTGGTGTGGATAAGT+TGG | 0.537432 | 4.2:+14009786 | MS.gene08537:CDS |
| ACAGAAACCGAAGGTGTCCA+AGG | 0.538288 | 4.2:+14012754 | MS.gene08537:CDS |
| CAATAATAGTATTTATCTGT+GGG | 0.539902 | 4.2:+14012985 | MS.gene08537:CDS |
| TTACCGGATACAAGCCTCCC+TGG | 0.543277 | 4.2:-14012856 | None:intergenic |
| AAATTTAAGCACAAAGATGA+AGG | 0.546613 | 4.2:+14012805 | MS.gene08537:CDS |
| TTCGTGTGGACTCCACTCAA+TGG | 0.553277 | 4.2:-14014035 | None:intergenic |
| GAGTGAATCATCTTCGGCGG+CGG | 0.557113 | 4.2:+14009735 | MS.gene08537:CDS |
| GCAATAATAGTATTTATCTG+TGG | 0.558281 | 4.2:+14012984 | MS.gene08537:CDS |
| TTCCATGTTGCAGCAGATGT+AGG | 0.568203 | 4.2:-14013010 | None:intergenic |
| TGGAGAGAATTGTAAGCAGA+AGG | 0.568749 | 4.2:-14009835 | None:intergenic |
| ACAAGCCTCCCTGGAACAAG+AGG | 0.572225 | 4.2:-14012847 | None:intergenic |
| TGTGCTTGAAAAGACGCAGC+TGG | 0.573745 | 4.2:-14013294 | None:intergenic |
| TAGGTTGGCTAGTTGTATGT+TGG | 0.574859 | 4.2:+14013434 | MS.gene08537:intron |
| GCCATCCAATATGAAAAGCA+TGG | 0.576629 | 4.2:-14009855 | None:intergenic |
| TCTTCCAACTTATCCACACC+AGG | 0.583170 | 4.2:-14009790 | None:intergenic |
| AGCCTACATCTGCTGCAACA+TGG | 0.586634 | 4.2:+14013008 | MS.gene08537:CDS |
| TTCTGTTCGAACTAAACCCA+TGG | 0.588801 | 4.2:-14010459 | None:intergenic |
| AAAAGTGTGGCAACCTGGTG+TGG | 0.591077 | 4.2:+14009777 | MS.gene08537:CDS |
| CTTACGTAGTTGATTATCAG+CGG | 0.592999 | 4.2:-14014080 | None:intergenic |
| GTATTTCATTACAGGGACAC+AGG | 0.601861 | 4.2:+14010496 | MS.gene08537:CDS |
| CTGATGTGAATGTATTGTCA+TGG | 0.604527 | 4.2:+14013322 | MS.gene08537:CDS |
| TACCTGCAAAGTAGGACCAC+CGG | 0.605560 | 4.2:-14011056 | None:intergenic |
| TGGCGTCGGGTAGTGATGAT+GGG | 0.605656 | 4.2:+14013454 | MS.gene08537:CDS |
| TATTAACCGGATACGCTCCA+TGG | 0.608736 | 4.2:+14011204 | MS.gene08537:CDS |
| ACACAGTGTATTTCATTACA+GGG | 0.609707 | 4.2:+14010489 | MS.gene08537:CDS |
| GGAAAAGGACGAGGAAGAGG+AGG | 0.612345 | 4.2:+14014327 | MS.gene08537:CDS |
| GAAGAAGAAGGTGGTGCCGG+TGG | 0.612395 | 4.2:+14011040 | MS.gene08537:CDS |
| ACTGATGACTCTGAAATGGA+TGG | 0.615606 | 4.2:+14010983 | MS.gene08537:CDS |
| CACAGGTTCCGGTAAAAGTG+TGG | 0.622299 | 4.2:+14009764 | MS.gene08537:CDS |
| ACTGGAGTCCTCTTGTTCCA+GGG | 0.624385 | 4.2:+14012839 | MS.gene08537:CDS |
| GTATTCAAAATGCGCTACCA+CGG | 0.630470 | 4.2:-14013993 | None:intergenic |
| AAAGGCAAAGAGCAAGAACA+AGG | 0.634436 | 4.2:+14009600 | MS.gene08537:CDS |
| ATCCAATCACATCCATTGAG+TGG | 0.634447 | 4.2:+14014023 | MS.gene08537:CDS |
| GGAGTCCTCTTGTTCCAGGG+AGG | 0.636093 | 4.2:+14012842 | MS.gene08537:CDS |
| TGACTCTGAAATGGATGGTG+AGG | 0.638725 | 4.2:+14010988 | MS.gene08537:CDS |
| GCCAATGAAGAAGCTTCGTG+TGG | 0.638913 | 4.2:-14014049 | None:intergenic |
| TGAATAGGAAGGAGATTCCG+TGG | 0.641695 | 4.2:+14013976 | MS.gene08537:intron |
| TGGTGAGGATAGTGATAGCG+AGG | 0.651927 | 4.2:+14011003 | MS.gene08537:CDS |
| GTAATGAAATACACTGTGTG+TGG | 0.652047 | 4.2:-14010485 | None:intergenic |
| GCCCAAGATGCACATATATG+GGG | 0.653392 | 4.2:-14011235 | None:intergenic |
| AACTAATTGAAGATGACTCG+CGG | 0.660356 | 4.2:+14009562 | None:intergenic |
| TTTGTTCTTTACCTAAGACA+AGG | 0.662595 | 4.2:-14009877 | None:intergenic |
| AGTGAAGACGAAGAAGAAGG+TGG | 0.675905 | 4.2:+14011031 | MS.gene08537:CDS |
| ACGGAGTGAATCATCTTCGG+CGG | 0.677615 | 4.2:+14009732 | MS.gene08537:CDS |
| CAATATGGGATACTCGTTTG+GGG | 0.693736 | 4.2:+14013265 | MS.gene08537:CDS |
| TATGGGATACTCGTTTGGGG+AGG | 0.701784 | 4.2:+14013268 | MS.gene08537:CDS |
| CTAGCAGAGACAGAAACCGA+AGG | 0.726742 | 4.2:+14012745 | MS.gene08537:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAACAAAAACAAAATAGT+CGG | - | chr4.2:14013928-14013947 | None:intergenic | 15.0% |
| !! | AATATTATCTATACTAATGT+TGG | - | chr4.2:14012238-14012257 | None:intergenic | 15.0% |
| !! | ATTTCAAAGATTAACTTATA+AGG | - | chr4.2:14012138-14012157 | None:intergenic | 15.0% |
| !!! | AAGTTCATTATTTTTTGAAT+AGG | + | chr4.2:14013961-14013980 | MS.gene08537:intron | 15.0% |
| !!! | ATAAGTTAATCTTTGAAATA+TGG | + | chr4.2:14012139-14012158 | MS.gene08537:intron | 15.0% |
| !!! | TCATGATTTATTTTTTGTTT+GGG | + | chr4.2:14010405-14010424 | MS.gene08537:intron | 15.0% |
| !!! | TTTTGAAAAAATTGAAGAAA+CGG | + | chr4.2:14009713-14009732 | MS.gene08537:intron | 15.0% |
| !! | AAGTAAAAATTCATATGAAG+AGG | - | chr4.2:14011086-14011105 | None:intergenic | 20.0% |
| !! | AATCCAAAGTAAGAAAAATA+AGG | - | chr4.2:14014260-14014279 | None:intergenic | 20.0% |
| !! | AGTAAAAATTCATATGAAGA+GGG | - | chr4.2:14011085-14011104 | None:intergenic | 20.0% |
| !! | ATAAATCCCTGAAATTTATT+AGG | - | chr4.2:14014157-14014176 | None:intergenic | 20.0% |
| !! | CAATAATAGTATTTATCTGT+GGG | + | chr4.2:14012985-14013004 | MS.gene08537:CDS | 20.0% |
| !! | TAATGATGTAATATGCTATT+AGG | - | chr4.2:14013714-14013733 | None:intergenic | 20.0% |
| !! | TATAGTACTAAACAAACTAT+GGG | - | chr4.2:14012165-14012184 | None:intergenic | 20.0% |
| !! | TTATAGTACTAAACAAACTA+TGG | - | chr4.2:14012166-14012185 | None:intergenic | 20.0% |
| !! | TTGAACAAAAATATACAACT+CGG | - | chr4.2:14012668-14012687 | None:intergenic | 20.0% |
| !!! | AGAAAGTTTACAATTTTGTA+TGG | - | chr4.2:14013552-14013571 | None:intergenic | 20.0% |
| !!! | CATGATTTATTTTTTGTTTG+GGG | + | chr4.2:14010406-14010425 | MS.gene08537:intron | 20.0% |
| !!! | GAGTTAATTTTTTTAATCGA+CGG | + | chr4.2:14011346-14011365 | MS.gene08537:intron | 20.0% |
| !!! | GCAACATATTGAAATTTTTA+AGG | + | chr4.2:14012541-14012560 | MS.gene08537:intron | 20.0% |
| !!! | GTCATGATTTATTTTTTGTT+TGG | + | chr4.2:14010404-14010423 | MS.gene08537:intron | 20.0% |
| !!! | TAGAATTTTTTGTCCTTTAA+TGG | + | chr4.2:14010653-14010672 | MS.gene08537:intron | 20.0% |
| !!! | TAGTATAGATAATATTTCTG+CGG | + | chr4.2:14012242-14012261 | MS.gene08537:intron | 20.0% |
| !!! | TCATTATTTTTTGAATAGGA+AGG | + | chr4.2:14013965-14013984 | MS.gene08537:intron | 20.0% |
| !!! | TTAAAGTATCCAATATTTCT+GGG | + | chr4.2:14010930-14010949 | MS.gene08537:CDS | 20.0% |
| !!! | TTAAGGTTCTTAAATTTTAG+CGG | + | chr4.2:14012558-14012577 | MS.gene08537:intron | 20.0% |
| !!! | TTTAAAGTATCCAATATTTC+TGG | + | chr4.2:14010929-14010948 | MS.gene08537:CDS | 20.0% |
| !!! | TTTGTATGGTTTTTCTATAT+GGG | - | chr4.2:14013538-14013557 | None:intergenic | 20.0% |
| !!! | TTTTGTATGGTTTTTCTATA+TGG | - | chr4.2:14013539-14013558 | None:intergenic | 20.0% |
| ! | AAAACTCAAAAGTCCATTAA+AGG | - | chr4.2:14010669-14010688 | None:intergenic | 25.0% |
| ! | AAATCTTCTTGGAATTCTAT+TGG | + | chr4.2:14010902-14010921 | MS.gene08537:CDS | 25.0% |
| ! | AAATTTAAGCACAAAGATGA+AGG | + | chr4.2:14012805-14012824 | MS.gene08537:CDS | 25.0% |
| ! | AAGAATTATGACATTGTGAT+TGG | + | chr4.2:14010205-14010224 | MS.gene08537:intron | 25.0% |
| ! | AATCATTCAACTGTTAATGT+GGG | - | chr4.2:14011838-14011857 | None:intergenic | 25.0% |
| ! | AATCTTCTTGGAATTCTATT+GGG | + | chr4.2:14010903-14010922 | MS.gene08537:CDS | 25.0% |
| ! | AATGAAATACAACAGATATG+AGG | - | chr4.2:14013406-14013425 | None:intergenic | 25.0% |
| ! | ACGAATTCCTAATAAATTTC+AGG | + | chr4.2:14014147-14014166 | MS.gene08537:intron | 25.0% |
| ! | ATAATTCAATGTAGTCACTT+GGG | + | chr4.2:14010098-14010117 | MS.gene08537:intron | 25.0% |
| ! | ATCAACTACGTAAGTAAATA+CGG | + | chr4.2:14014089-14014108 | MS.gene08537:intron | 25.0% |
| ! | CATATTTCATACTATGTTAG+TGG | + | chr4.2:14011432-14011451 | MS.gene08537:intron | 25.0% |
| ! | CGAATTCCTAATAAATTTCA+GGG | + | chr4.2:14014148-14014167 | MS.gene08537:intron | 25.0% |
| ! | CGTAATAAATTTGTAGATCT+GGG | + | chr4.2:14012699-14012718 | MS.gene08537:intron | 25.0% |
| ! | GCAATAATAGTATTTATCTG+TGG | + | chr4.2:14012984-14013003 | MS.gene08537:CDS | 25.0% |
| ! | GTTTCTCTCATATTATCTTT+GGG | + | chr4.2:14014180-14014199 | MS.gene08537:intron | 25.0% |
| ! | TAAATTTAGCTACATGATTG+TGG | + | chr4.2:14012024-14012043 | MS.gene08537:intron | 25.0% |
| ! | TAACAGCAAAATTACTGTAT+AGG | + | chr4.2:14013579-14013598 | MS.gene08537:intron | 25.0% |
| ! | TAATATGCTATTAGGACATA+AGG | - | chr4.2:14013706-14013725 | None:intergenic | 25.0% |
| ! | TAGAATGTATAAGATTGAAG+TGG | + | chr4.2:14011995-14012014 | MS.gene08537:intron | 25.0% |
| ! | TCAAAATGACAAAATATGTG+TGG | - | chr4.2:14011951-14011970 | None:intergenic | 25.0% |
| ! | TCATTGTCAAAGTAGATATA+AGG | + | chr4.2:14012929-14012948 | MS.gene08537:intron | 25.0% |
| ! | TGTTTCTCTCATATTATCTT+TGG | + | chr4.2:14014179-14014198 | MS.gene08537:intron | 25.0% |
| ! | TTATCTATACTAATGTTGGT+AGG | - | chr4.2:14012234-14012253 | None:intergenic | 25.0% |
| !! | ATTGAAAAAACTCCTTTTAC+TGG | + | chr4.2:14013034-14013053 | MS.gene08537:CDS | 25.0% |
| !! | TCTTGTGTGTTTTCTTTTAT+AGG | + | chr4.2:14010534-14010553 | MS.gene08537:intron | 25.0% |
| !! | TTAAACTATGAGCAACTTTT+TGG | - | chr4.2:14011399-14011418 | None:intergenic | 25.0% |
| !! | TTGTGCTTAAATTTTTGTAG+TGG | - | chr4.2:14012799-14012818 | None:intergenic | 25.0% |
| !!! | AATAAAACCCATTATTTTGC+TGG | + | chr4.2:14009932-14009951 | MS.gene08537:intron | 25.0% |
| !!! | ATTCTGCTTTTTATTTTCTG+TGG | + | chr4.2:14009669-14009688 | MS.gene08537:intron | 25.0% |
| !!! | GGACTTTATTGTTTTTGTTA+TGG | + | chr4.2:14012049-14012068 | MS.gene08537:intron | 25.0% |
| !!! | TTCTGCTTTTTATTTTCTGT+GGG | + | chr4.2:14009670-14009689 | MS.gene08537:intron | 25.0% |
| !!! | TTGAACCAAGTTATTTCTAT+TGG | + | chr4.2:14011581-14011600 | MS.gene08537:intron | 25.0% |
| !!! | TTTTTCTTGTTTCAATGTTG+TGG | + | chr4.2:14011614-14011633 | MS.gene08537:intron | 25.0% |
| AAAATAAGCCCAATGATTAC+CGG | - | chr4.2:14012875-14012894 | None:intergenic | 30.0% | |
| AAAGCTAGTAAAACATGACT+AGG | - | chr4.2:14010815-14010834 | None:intergenic | 30.0% | |
| AACAAAAACAAAATAGTCGG+CGG | - | chr4.2:14013925-14013944 | None:intergenic | 30.0% | |
| AATAAAGTGCGAGATCAAAA+GGG | - | chr4.2:14009652-14009671 | None:intergenic | 30.0% | |
| ACACAGTGTATTTCATTACA+GGG | + | chr4.2:14010489-14010508 | MS.gene08537:CDS | 30.0% | |
| ACTTCTTTGATAGAAAGAGA+TGG | - | chr4.2:14012625-14012644 | None:intergenic | 30.0% | |
| AGGATAAATTATTCTGTTCC+AGG | + | chr4.2:14012331-14012350 | MS.gene08537:intron | 30.0% | |
| ATCATTCAACTGTTAATGTG+GGG | - | chr4.2:14011837-14011856 | None:intergenic | 30.0% | |
| ATGTTGATCTTCATGTTTGT+AGG | + | chr4.2:14012956-14012975 | MS.gene08537:intron | 30.0% | |
| ATGTTGCAATTGCAATACTT+AGG | - | chr4.2:14012396-14012415 | None:intergenic | 30.0% | |
| CAATCATTCAACTGTTAATG+TGG | - | chr4.2:14011839-14011858 | None:intergenic | 30.0% | |
| CATAATTCAATGTAGTCACT+TGG | + | chr4.2:14010097-14010116 | MS.gene08537:intron | 30.0% | |
| CTGATCCAATAGAAATAACT+TGG | - | chr4.2:14011589-14011608 | None:intergenic | 30.0% | |
| CTTAGTAGAACATTGTCAAA+GGG | - | chr4.2:14011791-14011810 | None:intergenic | 30.0% | |
| GATAACTCCAGCAAAATAAT+GGG | - | chr4.2:14009942-14009961 | None:intergenic | 30.0% | |
| GATGCTTTAATTGTCTTATC+TGG | + | chr4.2:14013657-14013676 | MS.gene08537:intron | 30.0% | |
| GCGTAATAAATTTGTAGATC+TGG | + | chr4.2:14012698-14012717 | MS.gene08537:intron | 30.0% | |
| GCTTTAACCAAACATTTACT+TGG | - | chr4.2:14011313-14011332 | None:intergenic | 30.0% | |
| GTAAGAAAAATAAGGCAGTT+TGG | - | chr4.2:14014252-14014271 | None:intergenic | 30.0% | |
| GTAGTAAATGAGCCATTATT+TGG | + | chr4.2:14011456-14011475 | MS.gene08537:intron | 30.0% | |
| TAGAATGAAAATTGAGTCGA+TGG | - | chr4.2:14013378-14013397 | None:intergenic | 30.0% | |
| TCCTTCAAAAATGCATTTCT+GGG | - | chr4.2:14013823-14013842 | None:intergenic | 30.0% | |
| TCTTAGTAGAACATTGTCAA+AGG | - | chr4.2:14011792-14011811 | None:intergenic | 30.0% | |
| TGATAACTCCAGCAAAATAA+TGG | - | chr4.2:14009943-14009962 | None:intergenic | 30.0% | |
| TGTATTTCATTGTACTGAGT+AGG | + | chr4.2:14013415-14013434 | MS.gene08537:intron | 30.0% | |
| TGTCATAATTCTTGTGAAAG+AGG | - | chr4.2:14010198-14010217 | None:intergenic | 30.0% | |
| TGTTGATCTTCATGTTTGTA+GGG | + | chr4.2:14012957-14012976 | MS.gene08537:intron | 30.0% | |
| TTCCTTCAAAAATGCATTTC+TGG | - | chr4.2:14013824-14013843 | None:intergenic | 30.0% | |
| TTTCACAATTAATGTCTGCA+TGG | - | chr4.2:14012090-14012109 | None:intergenic | 30.0% | |
| TTTGTTCTTTACCTAAGACA+AGG | - | chr4.2:14009880-14009899 | None:intergenic | 30.0% | |
| ! | AGGAACTTTTTATCGGAAAA+TGG | - | chr4.2:14013686-14013705 | None:intergenic | 30.0% |
| ! | AGTTGATCTTACTGACATTT+TGG | + | chr4.2:14011136-14011155 | MS.gene08537:intron | 30.0% |
| ! | GGACATAAGGAACTTTTTAT+CGG | - | chr4.2:14013693-14013712 | None:intergenic | 30.0% |
| ! | TATTGCAATGCTTTTATCCA+CGG | - | chr4.2:14013250-14013269 | None:intergenic | 30.0% |
| ! | TGACATAGAATTGGTAACAT+TGG | - | chr4.2:14010231-14010250 | None:intergenic | 30.0% |
| !! | AGTATCTCGTTTGATTTGAT+AGG | + | chr4.2:14012311-14012330 | MS.gene08537:intron | 30.0% |
| !! | AGTTATTTCTATTGGATCAG+AGG | + | chr4.2:14011589-14011608 | MS.gene08537:intron | 30.0% |
| !! | GGATAAAAGCATTGCAATAT+GGG | + | chr4.2:14013251-14013270 | MS.gene08537:CDS | 30.0% |
| !! | GTAACGGAAAAGTTGATATT+GGG | + | chr4.2:14010610-14010629 | MS.gene08537:intron | 30.0% |
| !! | GTTATTTCTATTGGATCAGA+GGG | + | chr4.2:14011590-14011609 | MS.gene08537:intron | 30.0% |
| !! | TGGATAAAAGCATTGCAATA+TGG | + | chr4.2:14013250-14013269 | MS.gene08537:CDS | 30.0% |
| !!! | AGTTTTAAAAACCCTATGAC+TGG | + | chr4.2:14011280-14011299 | MS.gene08537:intron | 30.0% |
| !!! | CTGCCTTATTTTTCTTACTT+TGG | + | chr4.2:14014254-14014273 | MS.gene08537:intron | 30.0% |
| !!! | GAATGTTGTTATTTTGCCAT+GGG | + | chr4.2:14011732-14011751 | MS.gene08537:intron | 30.0% |
| !!! | TGAATGTTGTTATTTTGCCA+TGG | + | chr4.2:14011731-14011750 | MS.gene08537:intron | 30.0% |
| AAAGTGAGTATTTGAGAGCT+TGG | + | chr4.2:14011872-14011891 | MS.gene08537:intron | 35.0% | |
| AAGCAAACGCACAAAAATTG+TGG | - | chr4.2:14010352-14010371 | None:intergenic | 35.0% | |
| AATCCTTTGCCACAGAATAT+GGG | + | chr4.2:14014294-14014313 | MS.gene08537:intron | 35.0% | |
| ACACTGAAATGTTCCGAAAA+AGG | - | chr4.2:14013113-14013132 | None:intergenic | 35.0% | |
| ACCAAACATTTACTTGGCTA+AGG | - | chr4.2:14011307-14011326 | None:intergenic | 35.0% | |
| ACTGTTCATTACCGATCAAA+TGG | + | chr4.2:14010586-14010605 | MS.gene08537:intron | 35.0% | |
| ATAGCTCAAAGGATTCACAA+TGG | + | chr4.2:14011641-14011660 | MS.gene08537:intron | 35.0% | |
| CAAAAACATGAGGTTCTGTA+GGG | - | chr4.2:14013218-14013237 | None:intergenic | 35.0% | |
| CACACAGTGTATTTCATTAC+AGG | + | chr4.2:14010488-14010507 | MS.gene08537:CDS | 35.0% | |
| CATGCAACATATTATCAACG+AGG | - | chr4.2:14010868-14010887 | None:intergenic | 35.0% | |
| CTGATGTGAATGTATTGTCA+TGG | + | chr4.2:14013322-14013341 | MS.gene08537:CDS | 35.0% | |
| CTGGAGTTATCACTGTTAAA+TGG | + | chr4.2:14009951-14009970 | MS.gene08537:intron | 35.0% | |
| CTGTTCATTACCGATCAAAT+GGG | + | chr4.2:14010587-14010606 | MS.gene08537:intron | 35.0% | |
| CTTACGTAGTTGATTATCAG+CGG | - | chr4.2:14014083-14014102 | None:intergenic | 35.0% | |
| CTTGGGTAATGACAAAATCT+GGG | - | chr4.2:14011765-14011784 | None:intergenic | 35.0% | |
| GAATAAAGTGCGAGATCAAA+AGG | - | chr4.2:14009653-14009672 | None:intergenic | 35.0% | |
| GATACGACAGAAAAGTTGAA+GGG | - | chr4.2:14011484-14011503 | None:intergenic | 35.0% | |
| GTAATGAAATACACTGTGTG+TGG | - | chr4.2:14010488-14010507 | None:intergenic | 35.0% | |
| GTTGATCTTCATGTTTGTAG+GGG | + | chr4.2:14012958-14012977 | MS.gene08537:intron | 35.0% | |
| TAATCCTTTGCCACAGAATA+TGG | + | chr4.2:14014293-14014312 | MS.gene08537:intron | 35.0% | |
| TAGCTCAAAGGATTCACAAT+GGG | + | chr4.2:14011642-14011661 | MS.gene08537:intron | 35.0% | |
| TATTTGCAGAGTCCATGAAA+GGG | - | chr4.2:14014211-14014230 | None:intergenic | 35.0% | |
| TCATAGCTCTTGAATTGCAA+TGG | - | chr4.2:14010019-14010038 | None:intergenic | 35.0% | |
| TCATTCAACTGTTAATGTGG+GGG | - | chr4.2:14011836-14011855 | None:intergenic | 35.0% | |
| TCCTTAGCCAAGTAAATGTT+TGG | + | chr4.2:14011303-14011322 | MS.gene08537:intron | 35.0% | |
| TCTTTCCTACATGCTATTAG+TGG | + | chr4.2:14011507-14011526 | MS.gene08537:intron | 35.0% | |
| TGAATGTATTGTCATGGAAC+AGG | + | chr4.2:14013328-14013347 | MS.gene08537:CDS | 35.0% | |
| TGATACGACAGAAAAGTTGA+AGG | - | chr4.2:14011485-14011504 | None:intergenic | 35.0% | |
| TGTCTCATGAATCATCTTGA+AGG | + | chr4.2:14010558-14010577 | MS.gene08537:intron | 35.0% | |
| TGTTCATTACCGATCAAATG+GGG | + | chr4.2:14010588-14010607 | MS.gene08537:intron | 35.0% | |
| TTATTTGCAGAGTCCATGAA+AGG | - | chr4.2:14014212-14014231 | None:intergenic | 35.0% | |
| TTTAGCTACATGATTGTGGT+TGG | + | chr4.2:14012028-14012047 | MS.gene08537:intron | 35.0% | |
| TTTCATTGTACTGAGTAGGT+TGG | + | chr4.2:14013419-14013438 | MS.gene08537:intron | 35.0% | |
| ! | ACCCAGAAATGCATTTTTGA+AGG | + | chr4.2:14013819-14013838 | MS.gene08537:intron | 35.0% |
| ! | ATTGGTGACATTGGTAACAT+TGG | + | chr4.2:14010141-14010160 | MS.gene08537:intron | 35.0% |
| ! | CAGGTATAATTTTTGCCCTT+GGG | + | chr4.2:14012350-14012369 | MS.gene08537:intron | 35.0% |
| ! | GATATTTTACGTGACACCAT+GGG | + | chr4.2:14010443-14010462 | MS.gene08537:CDS | 35.0% |
| ! | GGTTTTTCTATATGGGCAAA+GGG | - | chr4.2:14013531-14013550 | None:intergenic | 35.0% |
| ! | GTTTTTCTATATGGGCAAAG+GGG | - | chr4.2:14013530-14013549 | None:intergenic | 35.0% |
| ! | TCCATGCTTTTCATATTGGA+TGG | + | chr4.2:14009854-14009873 | MS.gene08537:CDS | 35.0% |
| ! | TCTAATGAGTTGAAGTTTGC+TGG | + | chr4.2:14011972-14011991 | MS.gene08537:intron | 35.0% |
| ! | TCTCTCCATGCTTTTCATAT+TGG | + | chr4.2:14009850-14009869 | MS.gene08537:CDS | 35.0% |
| ! | TGAAACTGATGACTCTGAAA+TGG | + | chr4.2:14010979-14010998 | MS.gene08537:CDS | 35.0% |
| ! | TGACATAGAATTGGTGACAT+TGG | + | chr4.2:14010132-14010151 | MS.gene08537:intron | 35.0% |
| ! | TGGTTTTTCTATATGGGCAA+AGG | - | chr4.2:14013532-14013551 | None:intergenic | 35.0% |
| !! | ATACTAGCTCTGAACTTTGT+CGG | - | chr4.2:14012296-14012315 | None:intergenic | 35.0% |
| !! | GGTAACGGAAAAGTTGATAT+TGG | + | chr4.2:14010609-14010628 | MS.gene08537:intron | 35.0% |
| !! | TTAAATTTTAGCGGCAGCTA+AGG | + | chr4.2:14012567-14012586 | MS.gene08537:intron | 35.0% |
| !!! | AGGTATTCAGCATTGACTTT+TGG | + | chr4.2:14013348-14013367 | MS.gene08537:intron | 35.0% |
| !!! | GCAAATTGCACTGATTGTTT+TGG | + | chr4.2:14011706-14011725 | MS.gene08537:intron | 35.0% |
| AAAGGCAAAGAGCAAGAACA+AGG | + | chr4.2:14009600-14009619 | MS.gene08537:CDS | 40.0% | |
| AACATTGTCAAAGGGATGCT+TGG | - | chr4.2:14011783-14011802 | None:intergenic | 40.0% | |
| AAGAAAGGTCCCATATTCTG+TGG | - | chr4.2:14014306-14014325 | None:intergenic | 40.0% | |
| AAGGAACTTCTAGATGCACT+TGG | + | chr4.2:14013838-14013857 | MS.gene08537:intron | 40.0% | |
| ACATTGTCAAAGGGATGCTT+GGG | - | chr4.2:14011782-14011801 | None:intergenic | 40.0% | |
| ACGTCTCTTCCCAGAAATAT+TGG | - | chr4.2:14010942-14010961 | None:intergenic | 40.0% | |
| AGAGCTTGGAATTGTAACTG+AGG | + | chr4.2:14011886-14011905 | MS.gene08537:intron | 40.0% | |
| AGGATTCACAATGGGAATAG+AGG | + | chr4.2:14011650-14011669 | MS.gene08537:intron | 40.0% | |
| AGTAACCTCATTTGTACCCA+AGG | - | chr4.2:14012369-14012388 | None:intergenic | 40.0% | |
| ATACCGACACTTCTGATTGA+AGG | - | chr4.2:14010304-14010323 | None:intergenic | 40.0% | |
| ATCCAATCACATCCATTGAG+TGG | + | chr4.2:14014023-14014042 | MS.gene08537:CDS | 40.0% | |
| ATCCCCATATATGTGCATCT+TGG | + | chr4.2:14011233-14011252 | MS.gene08537:CDS | 40.0% | |
| ATGAAGGCTATGCTATAGAC+TGG | + | chr4.2:14012821-14012840 | MS.gene08537:CDS | 40.0% | |
| CAATATGGGATACTCGTTTG+GGG | + | chr4.2:14013265-14013284 | MS.gene08537:CDS | 40.0% | |
| CAGAATATGGGACCTTTCTT+TGG | + | chr4.2:14014306-14014325 | MS.gene08537:intron | 40.0% | |
| CCAAGGGCAAAAATTATACC+TGG | - | chr4.2:14012352-14012371 | None:intergenic | 40.0% | |
| CGGCATAAAACATCGTCAAA+AGG | + | chr4.2:14009582-14009601 | MS.gene08537:CDS | 40.0% | |
| CTGTCAGTATGTCCAGTAAA+AGG | - | chr4.2:14013049-14013068 | None:intergenic | 40.0% | |
| GAAACGGAGTGAATCATCTT+CGG | + | chr4.2:14009729-14009748 | MS.gene08537:intron | 40.0% | |
| GAATTCGTCCAACAATTCTG+TGG | - | chr4.2:14014135-14014154 | None:intergenic | 40.0% | |
| GACATGAGCTCTCATCTTAA+TGG | + | chr4.2:14012721-14012740 | MS.gene08537:CDS | 40.0% | |
| GAGCAAGAAGCAAAAACATG+AGG | - | chr4.2:14013228-14013247 | None:intergenic | 40.0% | |
| GAGTCATCAGTTTCACGTTT+AGG | - | chr4.2:14010974-14010993 | None:intergenic | 40.0% | |
| GATAGTGAAGACGAAGAAGA+AGG | + | chr4.2:14011028-14011047 | MS.gene08537:CDS | 40.0% | |
| GCAAAAACATGAGGTTCTGT+AGG | - | chr4.2:14013219-14013238 | None:intergenic | 40.0% | |
| GCAATATGGGATACTCGTTT+GGG | + | chr4.2:14013264-14013283 | MS.gene08537:CDS | 40.0% | |
| GCACTTGAGTGACATAGAAT+TGG | - | chr4.2:14010240-14010259 | None:intergenic | 40.0% | |
| GCCATCCAATATGAAAAGCA+TGG | - | chr4.2:14009858-14009877 | None:intergenic | 40.0% | |
| GCTTGGGTAATGACAAAATC+TGG | - | chr4.2:14011766-14011785 | None:intergenic | 40.0% | |
| GCTTGTATCCGGTAATCATT+GGG | + | chr4.2:14012864-14012883 | MS.gene08537:intron | 40.0% | |
| GGATTCACAATGGGAATAGA+GGG | + | chr4.2:14011651-14011670 | MS.gene08537:intron | 40.0% | |
| GTAACCTCATTTGTACCCAA+GGG | - | chr4.2:14012368-14012387 | None:intergenic | 40.0% | |
| GTATTCAAAATGCGCTACCA+CGG | - | chr4.2:14013996-14014015 | None:intergenic | 40.0% | |
| GTATTTCATTACAGGGACAC+AGG | + | chr4.2:14010496-14010515 | MS.gene08537:CDS | 40.0% | |
| TACACCATCCACAGAATTGT+TGG | + | chr4.2:14014124-14014143 | MS.gene08537:intron | 40.0% | |
| TCAACTTCAACACAGTCAAG+AGG | - | chr4.2:14011122-14011141 | None:intergenic | 40.0% | |
| TCACGAAGGGTTGTATTAAC+CGG | + | chr4.2:14011191-14011210 | MS.gene08537:intron | 40.0% | |
| TCAGACTGCTTAAGGTATGT+TGG | + | chr4.2:14013496-14013515 | MS.gene08537:intron | 40.0% | |
| TCCCCATATATGTGCATCTT+GGG | + | chr4.2:14011234-14011253 | MS.gene08537:CDS | 40.0% | |
| TGCAATATGGGATACTCGTT+TGG | + | chr4.2:14013263-14013282 | MS.gene08537:CDS | 40.0% | |
| TGCCCAAGATGCACATATAT+GGG | - | chr4.2:14011239-14011258 | None:intergenic | 40.0% | |
| TGGAGAGAATTGTAAGCAGA+AGG | - | chr4.2:14009838-14009857 | None:intergenic | 40.0% | |
| TGGATGTGATTGGATGCTTA+TGG | - | chr4.2:14014018-14014037 | None:intergenic | 40.0% | |
| TTACCGATCAAATGGGGTAA+CGG | + | chr4.2:14010594-14010613 | MS.gene08537:intron | 40.0% | |
| TTCTGTTCGAACTAAACCCA+TGG | - | chr4.2:14010462-14010481 | None:intergenic | 40.0% | |
| TTGTAACTGAGGACTCGATT+TGG | + | chr4.2:14011897-14011916 | MS.gene08537:intron | 40.0% | |
| TTTCCGTTACCCCATTTGAT+CGG | - | chr4.2:14010600-14010619 | None:intergenic | 40.0% | |
| ! | ACACCTTCAATCAGAAGTGT+CGG | + | chr4.2:14010298-14010317 | MS.gene08537:intron | 40.0% |
| ! | ATGGGACCTTTCTTTGGAAA+AGG | + | chr4.2:14014312-14014331 | MS.gene08537:CDS | 40.0% |
| ! | CCAGGTATAATTTTTGCCCT+TGG | + | chr4.2:14012349-14012368 | MS.gene08537:intron | 40.0% |
| ! | CGATATTTTACGTGACACCA+TGG | + | chr4.2:14010442-14010461 | MS.gene08537:CDS | 40.0% |
| ! | GTCGGTATTTAGAGTTCAAG+AGG | + | chr4.2:14010316-14010335 | MS.gene08537:intron | 40.0% |
| ! | TAGGTTGGCTAGTTGTATGT+TGG | + | chr4.2:14013434-14013453 | MS.gene08537:intron | 40.0% |
| ! | TATATGGGGATTTTGTGCCA+TGG | - | chr4.2:14011224-14011243 | None:intergenic | 40.0% |
| !! | ACTGATGACTCTGAAATGGA+TGG | + | chr4.2:14010983-14011002 | MS.gene08537:CDS | 40.0% |
| !! | AGTTGAAGGGTGCCAAATAA+TGG | - | chr4.2:14011471-14011490 | None:intergenic | 40.0% |
| !! | ATATTGGATGGCCTTGTCTT+AGG | + | chr4.2:14009866-14009885 | MS.gene08537:CDS | 40.0% |
| !! | CTTTGGGTTTTACCCTTTCA+TGG | + | chr4.2:14014196-14014215 | MS.gene08537:intron | 40.0% |
| !! | GTTCCGAAAAAGGTATTGCT+TGG | - | chr4.2:14013103-14013122 | None:intergenic | 40.0% |
| AGTGAAGACGAAGAAGAAGG+TGG | + | chr4.2:14011031-14011050 | MS.gene08537:CDS | 45.0% | |
| ATCAACTCCTTGGACACCTT+CGG | - | chr4.2:14012764-14012783 | None:intergenic | 45.0% | |
| CAAGAAGATTTCTCAGCCTG+GGG | - | chr4.2:14010893-14010912 | None:intergenic | 45.0% | |
| CACTAGCAGATAGCATCACA+AGG | - | chr4.2:14010729-14010748 | None:intergenic | 45.0% | |
| CCAAGAAGATTTCTCAGCCT+GGG | - | chr4.2:14010894-14010913 | None:intergenic | 45.0% | |
| CTCCACTCAATGGATGTGAT+TGG | - | chr4.2:14014028-14014047 | None:intergenic | 45.0% | |
| CTGCCCAAGATGCACATATA+TGG | - | chr4.2:14011240-14011259 | None:intergenic | 45.0% | |
| GCACTTGGGTGACATAGAAT+TGG | + | chr4.2:14010123-14010142 | MS.gene08537:intron | 45.0% | |
| GCCCAAGATGCACATATATG+GGG | - | chr4.2:14011238-14011257 | None:intergenic | 45.0% | |
| GGCTTGTATCCGGTAATCAT+TGG | + | chr4.2:14012863-14012882 | MS.gene08537:intron | 45.0% | |
| GTTGTGGCTGAATAGCTCAA+AGG | + | chr4.2:14011630-14011649 | MS.gene08537:intron | 45.0% | |
| TAATATGTTGCATGTGCCCC+AGG | + | chr4.2:14010874-14010893 | MS.gene08537:intron | 45.0% | |
| TACACCGACACAAGTGACTA+CGG | - | chr4.2:14010266-14010285 | None:intergenic | 45.0% | |
| TAGTCACTTGGGTAGCACTT+GGG | + | chr4.2:14010109-14010128 | MS.gene08537:intron | 45.0% | |
| TATTAACCGGATACGCTCCA+TGG | + | chr4.2:14011204-14011223 | MS.gene08537:CDS | 45.0% | |
| TATTATCTCCCGACCTGTTG+TGG | - | chr4.2:14012270-14012289 | None:intergenic | 45.0% | |
| TCCAAGAAGATTTCTCAGCC+TGG | - | chr4.2:14010895-14010914 | None:intergenic | 45.0% | |
| TCCACACGAAGCTTCTTCAT+TGG | + | chr4.2:14014048-14014067 | MS.gene08537:CDS | 45.0% | |
| TCGAGCCACTAATAGCATGT+AGG | - | chr4.2:14011515-14011534 | None:intergenic | 45.0% | |
| TCGTCCAACAATTCTGTGGA+TGG | - | chr4.2:14014131-14014150 | None:intergenic | 45.0% | |
| TCGTGATCTCAGACTGCTTA+AGG | + | chr4.2:14013488-14013507 | MS.gene08537:CDS | 45.0% | |
| TCTGTTCACACCTACAGTTG+CGG | + | chr4.2:14011160-14011179 | MS.gene08537:intron | 45.0% | |
| TCTTCCAACTTATCCACACC+AGG | - | chr4.2:14009793-14009812 | None:intergenic | 45.0% | |
| TGAATAGGAAGGAGATTCCG+TGG | + | chr4.2:14013976-14013995 | MS.gene08537:intron | 45.0% | |
| TGTTCAATGAACCCTTGCAG+TGG | + | chr4.2:14013190-14013209 | MS.gene08537:intron | 45.0% | |
| TTCCATGTTGCAGCAGATGT+AGG | - | chr4.2:14013013-14013032 | None:intergenic | 45.0% | |
| TTGGCTAAGGACCAGTCATA+GGG | - | chr4.2:14011294-14011313 | None:intergenic | 45.0% | |
| TTTGCCCTTGGGTACAAATG+AGG | + | chr4.2:14012361-14012380 | MS.gene08537:intron | 45.0% | |
| TTTGGAAAAGGACGAGGAAG+AGG | + | chr4.2:14014324-14014343 | MS.gene08537:CDS | 45.0% | |
| ! | CCGCCAAGCAATACCTTTTT+CGG | + | chr4.2:14013097-14013116 | MS.gene08537:intron | 45.0% |
| ! | CCTCGTCCTTTTCCAAAGAA+AGG | - | chr4.2:14014321-14014340 | None:intergenic | 45.0% |
| ! | CCTTTCTTTGGAAAAGGACG+AGG | + | chr4.2:14014318-14014337 | MS.gene08537:CDS | 45.0% |
| ! | TATTTCTGCGGTTCCACAAC+AGG | + | chr4.2:14012254-14012273 | MS.gene08537:intron | 45.0% |
| ! | TGTTGGTAGGTTCACAAGTC+AGG | - | chr4.2:14012221-14012240 | None:intergenic | 45.0% |
| !! | CCGAAAAAGGTATTGCTTGG+CGG | - | chr4.2:14013100-14013119 | None:intergenic | 45.0% |
| !! | TGACTCTGAAATGGATGGTG+AGG | + | chr4.2:14010988-14011007 | MS.gene08537:CDS | 45.0% |
| !! | TGCGTCTTTTCAAGCACACA+AGG | + | chr4.2:14013299-14013318 | MS.gene08537:CDS | 45.0% |
| !! | TGTTTTTGCTTCTTGCTCCG+TGG | + | chr4.2:14013230-14013249 | MS.gene08537:CDS | 45.0% |
| ACACCGACACAAGTGACTAC+GGG | - | chr4.2:14010265-14010284 | None:intergenic | 50.0% | |
| ACGGAGTGAATCATCTTCGG+CGG | + | chr4.2:14009732-14009751 | MS.gene08537:CDS | 50.0% | |
| ACTGGAGTCCTCTTGTTCCA+GGG | + | chr4.2:14012839-14012858 | MS.gene08537:CDS | 50.0% | |
| AGCCTACATCTGCTGCAACA+TGG | + | chr4.2:14013008-14013027 | MS.gene08537:CDS | 50.0% | |
| AGCGGCAGCTAAGGTTGTTA+AGG | + | chr4.2:14012576-14012595 | MS.gene08537:intron | 50.0% | |
| AGGTTCACAAGTCAGGTCGT+GGG | - | chr4.2:14012214-14012233 | None:intergenic | 50.0% | |
| CACAGGTTCCGGTAAAAGTG+TGG | + | chr4.2:14009764-14009783 | MS.gene08537:CDS | 50.0% | |
| CCCAGGCTGAGAAATCTTCT+TGG | + | chr4.2:14010891-14010910 | MS.gene08537:intron | 50.0% | |
| CCTGAACTGCATCAACTCCT+TGG | - | chr4.2:14012774-14012793 | None:intergenic | 50.0% | |
| CTACCCGTAGTCACTTGTGT+CGG | + | chr4.2:14010259-14010278 | MS.gene08537:intron | 50.0% | |
| CTAGCAGAGACAGAAACCGA+AGG | + | chr4.2:14012745-14012764 | MS.gene08537:CDS | 50.0% | |
| CTTGGCTAAGGACCAGTCAT+AGG | - | chr4.2:14011295-14011314 | None:intergenic | 50.0% | |
| GAGTTACCTTCCGCAACTGT+AGG | - | chr4.2:14011173-14011192 | None:intergenic | 50.0% | |
| GCAACCTGGTGTGGATAAGT+TGG | + | chr4.2:14009786-14009805 | MS.gene08537:CDS | 50.0% | |
| GCCAATGAAGAAGCTTCGTG+TGG | - | chr4.2:14014052-14014071 | None:intergenic | 50.0% | |
| GCCGATCACAATGTCACAAG+CGG | + | chr4.2:14010163-14010182 | MS.gene08537:intron | 50.0% | |
| GCCGCTTGTGACATTGTGAT+CGG | - | chr4.2:14010167-14010186 | None:intergenic | 50.0% | |
| GCGGCAGCTAAGGTTGTTAA+GGG | + | chr4.2:14012577-14012596 | MS.gene08537:intron | 50.0% | |
| GCTAGTTGTATGTTGGCGTC+GGG | + | chr4.2:14013441-14013460 | MS.gene08537:CDS | 50.0% | |
| GGTCCCATATTCTGTGGCAA+AGG | - | chr4.2:14014300-14014319 | None:intergenic | 50.0% | |
| GTAGTCACTTGGGTAGCACT+TGG | + | chr4.2:14010108-14010127 | MS.gene08537:intron | 50.0% | |
| TACCTGCAAAGTAGGACCAC+CGG | - | chr4.2:14011059-14011078 | None:intergenic | 50.0% | |
| TAGGTTCACAAGTCAGGTCG+TGG | - | chr4.2:14012215-14012234 | None:intergenic | 50.0% | |
| TATGGGATACTCGTTTGGGG+AGG | + | chr4.2:14013268-14013287 | MS.gene08537:CDS | 50.0% | |
| TGCGGAAGGTAACTCACGAA+GGG | + | chr4.2:14011178-14011197 | MS.gene08537:intron | 50.0% | |
| TGTGCATCTTGGGCAGAATC+TGG | + | chr4.2:14011244-14011263 | MS.gene08537:CDS | 50.0% | |
| TGTGCTTGAAAAGACGCAGC+TGG | - | chr4.2:14013297-14013316 | None:intergenic | 50.0% | |
| TTCACACCTACAGTTGCGGA+AGG | + | chr4.2:14011164-14011183 | MS.gene08537:intron | 50.0% | |
| TTCGTGTGGACTCCACTCAA+TGG | - | chr4.2:14014038-14014057 | None:intergenic | 50.0% | |
| TTGCGGAAGGTAACTCACGA+AGG | + | chr4.2:14011177-14011196 | MS.gene08537:intron | 50.0% | |
| TTTGTGCCATGGAGCGTATC+CGG | - | chr4.2:14011213-14011232 | None:intergenic | 50.0% | |
| ! | AAAAGTGTGGCAACCTGGTG+TGG | + | chr4.2:14009777-14009796 | MS.gene08537:CDS | 50.0% |
| ! | AAATCTGGGACATCAGCCCA+TGG | - | chr4.2:14011751-14011770 | None:intergenic | 50.0% |
| ! | CACACTTTTACCGGAACCTG+TGG | - | chr4.2:14009766-14009785 | None:intergenic | 50.0% |
| ! | CCAGGTTGCCACACTTTTAC+CGG | - | chr4.2:14009775-14009794 | None:intergenic | 50.0% |
| ! | CTTGTGTCGGTGTAGTACAC+TGG | + | chr4.2:14010272-14010291 | MS.gene08537:intron | 50.0% |
| ! | GGCTAGTTGTATGTTGGCGT+CGG | + | chr4.2:14013440-14013459 | MS.gene08537:CDS | 50.0% |
| ! | TGGTGAGGATAGTGATAGCG+AGG | + | chr4.2:14011003-14011022 | MS.gene08537:CDS | 50.0% |
| !! | ACAGAAACCGAAGGTGTCCA+AGG | + | chr4.2:14012754-14012773 | MS.gene08537:CDS | 50.0% |
| !! | CCAAGGAGTTGATGCAGTTC+AGG | + | chr4.2:14012771-14012790 | MS.gene08537:CDS | 50.0% |
| !! | CTAGCTCTGAACTTTGTCGG+AGG | - | chr4.2:14012293-14012312 | None:intergenic | 50.0% |
| !! | GAGGGTGTTACCTGCAAAGT+AGG | - | chr4.2:14011067-14011086 | None:intergenic | 50.0% |
| ACAAGCCTCCCTGGAACAAG+AGG | - | chr4.2:14012850-14012869 | None:intergenic | 55.0% | |
| GACGAAGAAGAAGGTGGTGC+CGG | + | chr4.2:14011037-14011056 | MS.gene08537:CDS | 55.0% | |
| GACTGGAGTCCTCTTGTTCC+AGG | + | chr4.2:14012838-14012857 | MS.gene08537:CDS | 55.0% | |
| GAGTGAATCATCTTCGGCGG+CGG | + | chr4.2:14009735-14009754 | MS.gene08537:CDS | 55.0% | |
| GGAAAAGGACGAGGAAGAGG+AGG | + | chr4.2:14014327-14014346 | MS.gene08537:CDS | 55.0% | |
| GGCAGAATCTGGTCATGTGC+AGG | + | chr4.2:14011255-14011274 | MS.gene08537:CDS | 55.0% | |
| GTTCCAGGGAGGCTTGTATC+CGG | + | chr4.2:14012853-14012872 | MS.gene08537:CDS | 55.0% | |
| TCTGCGGTTCCACAACAGGT+CGG | + | chr4.2:14012258-14012277 | MS.gene08537:intron | 55.0% | |
| TCTGTAGGGCTCCACTGCAA+GGG | - | chr4.2:14013204-14013223 | None:intergenic | 55.0% | |
| TTACCGGATACAAGCCTCCC+TGG | - | chr4.2:14012859-14012878 | None:intergenic | 55.0% | |
| TTCTGTAGGGCTCCACTGCA+AGG | - | chr4.2:14013205-14013224 | None:intergenic | 55.0% | |
| ! | CCGGTAAAAGTGTGGCAACC+TGG | + | chr4.2:14009772-14009791 | MS.gene08537:CDS | 55.0% |
| ! | TGGCGTCGGGTAGTGATGAT+GGG | + | chr4.2:14013454-14013473 | MS.gene08537:CDS | 55.0% |
| ! | TTCTGGGAAGAGACGTGAGC+TGG | + | chr4.2:14010946-14010965 | MS.gene08537:CDS | 55.0% |
| ! | TTGGCGTCGGGTAGTGATGA+TGG | + | chr4.2:14013453-14013472 | MS.gene08537:CDS | 55.0% |
| CTGCGGTTCCACAACAGGTC+GGG | + | chr4.2:14012259-14012278 | MS.gene08537:intron | 60.0% | |
| GGAGTCCTCTTGTTCCAGGG+AGG | + | chr4.2:14012842-14012861 | MS.gene08537:CDS | 60.0% | |
| TGAATCATCTTCGGCGGCGG+CGG | + | chr4.2:14009738-14009757 | MS.gene08537:CDS | 60.0% | |
| TGCCGGTGGTCCTACTTTGC+AGG | + | chr4.2:14011054-14011073 | MS.gene08537:CDS | 60.0% | |
| ! | GAAGAAGAAGGTGGTGCCGG+TGG | + | chr4.2:14011040-14011059 | MS.gene08537:CDS | 60.0% |
| ! | GGCGGCGGCGCCACAGGTTC+CGG | + | chr4.2:14009753-14009772 | MS.gene08537:CDS | 80.0% |
| ! | TTCGGCGGCGGCGGCGCCAC+AGG | + | chr4.2:14009747-14009766 | MS.gene08537:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 14009574 | 14014378 | 14009574 | ID=MS.gene08537 |
| chr4.2 | mRNA | 14009574 | 14014378 | 14009574 | ID=MS.gene08537.t1;Parent=MS.gene08537 |
| chr4.2 | exon | 14009574 | 14009621 | 14009574 | ID=MS.gene08537.t1.exon1;Parent=MS.gene08537.t1 |
| chr4.2 | CDS | 14009574 | 14009621 | 14009574 | ID=cds.MS.gene08537.t1;Parent=MS.gene08537.t1 |
| chr4.2 | exon | 14009730 | 14009887 | 14009730 | ID=MS.gene08537.t1.exon2;Parent=MS.gene08537.t1 |
| chr4.2 | CDS | 14009730 | 14009887 | 14009730 | ID=cds.MS.gene08537.t1;Parent=MS.gene08537.t1 |
| chr4.2 | exon | 14010439 | 14010517 | 14010439 | ID=MS.gene08537.t1.exon3;Parent=MS.gene08537.t1 |
| chr4.2 | CDS | 14010439 | 14010517 | 14010439 | ID=cds.MS.gene08537.t1;Parent=MS.gene08537.t1 |
| chr4.2 | exon | 14010896 | 14011075 | 14010896 | ID=MS.gene08537.t1.exon4;Parent=MS.gene08537.t1 |
| chr4.2 | CDS | 14010896 | 14011075 | 14010896 | ID=cds.MS.gene08537.t1;Parent=MS.gene08537.t1 |
| chr4.2 | exon | 14011199 | 14011276 | 14011199 | ID=MS.gene08537.t1.exon5;Parent=MS.gene08537.t1 |
| chr4.2 | CDS | 14011199 | 14011276 | 14011199 | ID=cds.MS.gene08537.t1;Parent=MS.gene08537.t1 |
| chr4.2 | exon | 14012715 | 14012874 | 14012715 | ID=MS.gene08537.t1.exon6;Parent=MS.gene08537.t1 |
| chr4.2 | CDS | 14012715 | 14012874 | 14012715 | ID=cds.MS.gene08537.t1;Parent=MS.gene08537.t1 |
| chr4.2 | exon | 14012978 | 14013084 | 14012978 | ID=MS.gene08537.t1.exon7;Parent=MS.gene08537.t1 |
| chr4.2 | CDS | 14012978 | 14013084 | 14012978 | ID=cds.MS.gene08537.t1;Parent=MS.gene08537.t1 |
| chr4.2 | exon | 14013210 | 14013349 | 14013210 | ID=MS.gene08537.t1.exon8;Parent=MS.gene08537.t1 |
| chr4.2 | CDS | 14013210 | 14013349 | 14013210 | ID=cds.MS.gene08537.t1;Parent=MS.gene08537.t1 |
| chr4.2 | exon | 14013437 | 14013509 | 14013437 | ID=MS.gene08537.t1.exon9;Parent=MS.gene08537.t1 |
| chr4.2 | CDS | 14013437 | 14013509 | 14013437 | ID=cds.MS.gene08537.t1;Parent=MS.gene08537.t1 |
| chr4.2 | exon | 14013983 | 14014101 | 14013983 | ID=MS.gene08537.t1.exon10;Parent=MS.gene08537.t1 |
| chr4.2 | CDS | 14013983 | 14014101 | 14013983 | ID=cds.MS.gene08537.t1;Parent=MS.gene08537.t1 |
| chr4.2 | exon | 14014309 | 14014378 | 14014309 | ID=MS.gene08537.t1.exon11;Parent=MS.gene08537.t1 |
| chr4.2 | CDS | 14014309 | 14014378 | 14014309 | ID=cds.MS.gene08537.t1;Parent=MS.gene08537.t1 |
| Gene Sequence |
| Protein sequence |
