Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24425.t1 | XP_003589160.1 | 96.9 | 647 | 20 | 0 | 1 | 647 | 1 | 647 | 0.00E+00 | 1133.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24425.t1 | P42731 | 68.7 | 652 | 174 | 6 | 1 | 645 | 1 | 629 | 3.0e-228 | 792.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24425.t1 | G7I2E2 | 96.9 | 647 | 20 | 0 | 1 | 647 | 1 | 647 | 0.0e+00 | 1133.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene24425 | -0.827137 | 1.85E-54 | -1.69E-46 |
| MS.gene049419 | MS.gene24425 | 0.804255 | 2.36E-49 | -1.69E-46 |
| MS.gene051122 | MS.gene24425 | -0.802471 | 5.52E-49 | -1.69E-46 |
| MS.gene051924 | MS.gene24425 | 0.811502 | 6.78E-51 | -1.69E-46 |
| MS.gene051926 | MS.gene24425 | 0.826138 | 3.20E-54 | -1.69E-46 |
| MS.gene052176 | MS.gene24425 | -0.817629 | 2.99E-52 | -1.69E-46 |
| MS.gene052389 | MS.gene24425 | -0.812947 | 3.28E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene24425 | -0.801852 | 7.40E-49 | -1.69E-46 |
| MS.gene052677 | MS.gene24425 | -0.8044 | 2.20E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene24425 | -0.817945 | 2.53E-52 | -1.69E-46 |
| MS.gene055453 | MS.gene24425 | 0.806382 | 8.45E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene24425 | -0.841579 | 4.36E-58 | -1.69E-46 |
| MS.gene057156 | MS.gene24425 | 0.846329 | 2.33E-59 | -1.69E-46 |
| MS.gene05761 | MS.gene24425 | -0.822296 | 2.56E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene24425 | -0.808782 | 2.62E-50 | -1.69E-46 |
| MS.gene060879 | MS.gene24425 | -0.808385 | 3.18E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24425.t1 | MTR_1g019150 | 98.300 | 647 | 11 | 0 | 1 | 647 | 1 | 647 | 0.0 | 1311 |
| MS.gene24425.t1 | MTR_4g085540 | 75.000 | 644 | 153 | 5 | 1 | 638 | 1 | 642 | 0.0 | 942 |
| MS.gene24425.t1 | MTR_3g102040 | 73.558 | 624 | 143 | 6 | 25 | 647 | 17 | 619 | 0.0 | 904 |
| MS.gene24425.t1 | MTR_3g102040 | 35.473 | 296 | 173 | 4 | 112 | 406 | 16 | 294 | 3.84e-47 | 176 |
| MS.gene24425.t1 | MTR_1g097440 | 56.615 | 650 | 255 | 15 | 9 | 645 | 10 | 645 | 0.0 | 691 |
| MS.gene24425.t1 | MTR_6g040190 | 51.033 | 629 | 258 | 13 | 21 | 629 | 14 | 612 | 0.0 | 576 |
| MS.gene24425.t1 | MTR_7g102730 | 44.127 | 630 | 302 | 11 | 23 | 626 | 1 | 606 | 2.04e-160 | 475 |
| MS.gene24425.t1 | MTR_6g040070 | 58.747 | 383 | 149 | 7 | 106 | 483 | 1 | 379 | 8.11e-144 | 437 |
| MS.gene24425.t1 | MTR_6g040070 | 36.934 | 287 | 162 | 5 | 33 | 302 | 16 | 300 | 3.52e-47 | 178 |
| MS.gene24425.t1 | MTR_6g040070 | 33.005 | 203 | 113 | 5 | 32 | 215 | 105 | 303 | 4.32e-22 | 101 |
| MS.gene24425.t1 | MTR_1g061870 | 42.630 | 441 | 225 | 4 | 33 | 469 | 16 | 432 | 6.07e-114 | 352 |
| MS.gene24425.t1 | MTR_1g061870 | 35.889 | 287 | 164 | 4 | 120 | 404 | 15 | 283 | 8.98e-45 | 167 |
| MS.gene24425.t1 | MTR_1g061870 | 29.570 | 186 | 118 | 2 | 32 | 205 | 194 | 378 | 3.30e-21 | 98.2 |
| MS.gene24425.t1 | MTR_1g020080 | 28.975 | 283 | 191 | 6 | 122 | 400 | 99 | 375 | 7.06e-30 | 123 |
| MS.gene24425.t1 | MTR_1g020080 | 27.376 | 263 | 167 | 7 | 33 | 276 | 98 | 355 | 4.14e-23 | 102 |
| MS.gene24425.t1 | MTR_3g065190 | 37.791 | 172 | 104 | 3 | 32 | 201 | 25 | 195 | 1.39e-29 | 121 |
| MS.gene24425.t1 | MTR_3g065190 | 30.000 | 200 | 127 | 5 | 113 | 309 | 18 | 207 | 1.95e-18 | 88.2 |
| MS.gene24425.t1 | MTR_3g065190 | 31.122 | 196 | 114 | 5 | 207 | 399 | 21 | 198 | 6.80e-18 | 86.7 |
| MS.gene24425.t1 | MTR_3g101370 | 27.152 | 302 | 205 | 8 | 107 | 399 | 76 | 371 | 5.57e-26 | 111 |
| MS.gene24425.t1 | MTR_3g101370 | 25.758 | 264 | 171 | 7 | 33 | 276 | 94 | 352 | 4.21e-20 | 93.6 |
| MS.gene24425.t1 | MTR_2g022950 | 28.137 | 263 | 162 | 9 | 33 | 273 | 61 | 318 | 7.31e-24 | 104 |
| MS.gene24425.t1 | MTR_2g022950 | 25.188 | 266 | 186 | 9 | 122 | 380 | 62 | 321 | 1.90e-19 | 91.7 |
| MS.gene24425.t1 | MTR_3g109090 | 27.143 | 280 | 163 | 7 | 33 | 279 | 45 | 316 | 1.80e-22 | 100 |
| MS.gene24425.t1 | MTR_3g109090 | 25.084 | 299 | 197 | 7 | 112 | 392 | 36 | 325 | 3.74e-18 | 87.8 |
| MS.gene24425.t1 | MTR_3g109090 | 27.143 | 280 | 163 | 7 | 33 | 279 | 61 | 332 | 2.76e-22 | 100 |
| MS.gene24425.t1 | MTR_3g109090 | 25.084 | 299 | 197 | 7 | 112 | 392 | 52 | 341 | 5.53e-18 | 87.4 |
| MS.gene24425.t1 | MTR_2g097960 | 24.534 | 322 | 197 | 8 | 33 | 314 | 16 | 331 | 3.13e-22 | 100 |
| MS.gene24425.t1 | MTR_2g097960 | 24.870 | 193 | 128 | 5 | 206 | 394 | 10 | 189 | 2.08e-12 | 70.1 |
| MS.gene24425.t1 | MTR_4g124940 | 26.667 | 300 | 190 | 8 | 112 | 392 | 38 | 326 | 6.53e-22 | 99.0 |
| MS.gene24425.t1 | MTR_4g124940 | 25.818 | 275 | 162 | 7 | 33 | 274 | 47 | 312 | 2.72e-19 | 90.9 |
| MS.gene24425.t1 | MTR_4g131970 | 26.950 | 282 | 170 | 10 | 14 | 273 | 64 | 331 | 9.42e-22 | 98.6 |
| MS.gene24425.t1 | MTR_4g131970 | 25.455 | 275 | 193 | 8 | 112 | 380 | 66 | 334 | 6.76e-20 | 92.8 |
| MS.gene24425.t1 | MTR_1723s0010 | 68.421 | 57 | 18 | 0 | 29 | 85 | 22 | 78 | 1.07e-20 | 87.0 |
| MS.gene24425.t1 | MTR_0989s0020 | 63.380 | 71 | 25 | 1 | 567 | 636 | 11 | 81 | 2.41e-20 | 86.3 |
| MS.gene24425.t1 | MTR_1889s0010 | 54.286 | 70 | 32 | 0 | 18 | 87 | 6 | 75 | 4.06e-19 | 82.8 |
| MS.gene24425.t1 | MTR_4g086600 | 26.282 | 312 | 180 | 10 | 122 | 399 | 118 | 413 | 6.77e-19 | 90.5 |
| MS.gene24425.t1 | MTR_4g086600 | 25.795 | 283 | 166 | 8 | 33 | 276 | 117 | 394 | 1.22e-17 | 86.7 |
| MS.gene24425.t1 | MTR_4g086600 | 30.256 | 195 | 122 | 6 | 205 | 394 | 110 | 295 | 1.81e-14 | 76.6 |
| MS.gene24425.t1 | MTR_8g022050 | 26.374 | 273 | 163 | 7 | 33 | 274 | 63 | 328 | 1.98e-18 | 88.6 |
| MS.gene24425.t1 | MTR_8g022050 | 26.335 | 281 | 173 | 9 | 111 | 372 | 57 | 322 | 1.94e-16 | 82.4 |
| MS.gene24425.t1 | MTR_8g022050 | 25.824 | 182 | 115 | 4 | 212 | 392 | 63 | 225 | 7.93e-12 | 68.2 |
| MS.gene24425.t1 | MTR_2g022950 | 28.824 | 170 | 112 | 4 | 33 | 193 | 61 | 230 | 8.14e-18 | 84.3 |
| MS.gene24425.t1 | MTR_2g022950 | 28.824 | 170 | 112 | 4 | 33 | 193 | 61 | 230 | 4.84e-17 | 82.4 |
| MS.gene24425.t1 | MTR_1g020080 | 29.167 | 168 | 112 | 4 | 33 | 193 | 98 | 265 | 2.42e-16 | 80.9 |
| MS.gene24425.t1 | MTR_1g020080 | 27.320 | 194 | 137 | 4 | 122 | 311 | 99 | 292 | 7.48e-15 | 76.3 |
| MS.gene24425.t1 | MTR_7g118120 | 27.407 | 405 | 229 | 18 | 109 | 500 | 93 | 445 | 5.01e-16 | 81.6 |
| MS.gene24425.t1 | MTR_7g118120 | 22.677 | 269 | 189 | 5 | 32 | 292 | 104 | 361 | 3.67e-14 | 75.9 |
| MS.gene24425.t1 | MTR_7g094660 | 23.877 | 423 | 270 | 13 | 14 | 395 | 316 | 727 | 1.80e-15 | 80.9 |
| MS.gene24425.t1 | MTR_7g094660 | 25.946 | 185 | 113 | 5 | 26 | 192 | 635 | 813 | 6.75e-11 | 66.2 |
| MS.gene24425.t1 | MTR_8g076100 | 24.219 | 256 | 172 | 8 | 34 | 278 | 420 | 664 | 4.35e-15 | 79.7 |
| MS.gene24425.t1 | MTR_8g076100 | 24.219 | 256 | 172 | 8 | 34 | 278 | 420 | 664 | 7.24e-15 | 79.0 |
| MS.gene24425.t1 | MTR_8g076100 | 24.219 | 256 | 172 | 8 | 34 | 278 | 420 | 664 | 1.21e-14 | 78.2 |
| MS.gene24425.t1 | MTR_3g027140 | 30.500 | 200 | 128 | 6 | 184 | 380 | 34 | 225 | 1.79e-14 | 73.9 |
| MS.gene24425.t1 | MTR_3g027140 | 25.146 | 171 | 116 | 3 | 34 | 192 | 62 | 232 | 1.93e-11 | 65.1 |
| MS.gene24425.t1 | MTR_4g052940 | 24.590 | 244 | 168 | 6 | 32 | 269 | 110 | 343 | 2.23e-14 | 76.6 |
| MS.gene24425.t1 | MTR_8g007390 | 23.622 | 254 | 171 | 7 | 34 | 276 | 217 | 458 | 2.25e-14 | 77.0 |
| MS.gene24425.t1 | MTR_8g007390 | 23.622 | 254 | 171 | 7 | 34 | 276 | 216 | 457 | 2.35e-14 | 77.0 |
| MS.gene24425.t1 | MTR_0913s0010 | 63.333 | 60 | 21 | 1 | 571 | 629 | 1 | 60 | 2.39e-14 | 68.6 |
| MS.gene24425.t1 | MTR_3g101370 | 26.627 | 169 | 116 | 4 | 33 | 193 | 94 | 262 | 2.73e-14 | 74.3 |
| MS.gene24425.t1 | MTR_3g101370 | 26.761 | 213 | 147 | 6 | 107 | 310 | 76 | 288 | 6.51e-14 | 73.6 |
| MS.gene24425.t1 | MTR_7g096260 | 24.156 | 385 | 251 | 8 | 34 | 382 | 194 | 573 | 7.82e-14 | 75.5 |
| MS.gene24425.t1 | MTR_7g096260 | 24.156 | 385 | 251 | 8 | 34 | 382 | 180 | 559 | 8.12e-14 | 75.1 |
| MS.gene24425.t1 | MTR_1g064230 | 29.016 | 193 | 108 | 4 | 25 | 192 | 81 | 269 | 9.45e-14 | 72.4 |
| MS.gene24425.t1 | MTR_1g056520 | 27.778 | 162 | 105 | 2 | 34 | 183 | 110 | 271 | 1.01e-13 | 72.8 |
| MS.gene24425.t1 | MTR_1g056520 | 30.151 | 199 | 127 | 5 | 196 | 390 | 93 | 283 | 1.18e-13 | 72.8 |
| MS.gene24425.t1 | MTR_7g106440 | 28.415 | 183 | 102 | 4 | 28 | 185 | 100 | 278 | 2.86e-13 | 71.6 |
| MS.gene24425.t1 | MTR_7g106440 | 30.457 | 197 | 130 | 5 | 198 | 390 | 95 | 288 | 7.01e-13 | 70.5 |
| MS.gene24425.t1 | MTR_3g075500 | 30.994 | 171 | 102 | 4 | 231 | 396 | 129 | 288 | 2.92e-13 | 71.2 |
| MS.gene24425.t1 | MTR_3g075500 | 27.059 | 170 | 112 | 3 | 34 | 192 | 111 | 279 | 3.52e-12 | 68.2 |
| MS.gene24425.t1 | MTR_3g075500 | 26.667 | 180 | 125 | 4 | 120 | 292 | 109 | 288 | 7.07e-11 | 63.9 |
| MS.gene24425.t1 | MTR_4g052940 | 24.590 | 244 | 168 | 6 | 32 | 269 | 110 | 343 | 7.73e-13 | 70.9 |
| MS.gene24425.t1 | MTR_4g104470 | 27.545 | 167 | 112 | 3 | 34 | 192 | 124 | 289 | 8.19e-13 | 70.1 |
| MS.gene24425.t1 | MTR_4g104470 | 28.342 | 187 | 119 | 4 | 213 | 396 | 124 | 298 | 3.67e-11 | 65.1 |
| MS.gene24425.t1 | MTR_7g107580 | 27.170 | 265 | 159 | 7 | 213 | 463 | 18 | 262 | 9.05e-13 | 70.5 |
| MS.gene24425.t1 | MTR_4g122650 | 25.773 | 194 | 124 | 5 | 210 | 398 | 87 | 265 | 1.61e-12 | 71.2 |
| MS.gene24425.t1 | MTR_4g122650 | 26.144 | 153 | 110 | 1 | 34 | 183 | 90 | 242 | 4.13e-11 | 66.6 |
| MS.gene24425.t1 | MTR_7g010360 | 23.828 | 256 | 179 | 7 | 19 | 269 | 339 | 583 | 1.62e-12 | 71.2 |
| MS.gene24425.t1 | MTR_7g107580 | 27.170 | 265 | 159 | 7 | 213 | 463 | 18 | 262 | 2.08e-12 | 70.1 |
| MS.gene24425.t1 | MTR_7g104800 | 25.306 | 245 | 162 | 8 | 32 | 269 | 101 | 331 | 4.66e-12 | 69.3 |
| MS.gene24425.t1 | MTR_3g084040 | 37.000 | 100 | 57 | 2 | 10 | 109 | 19 | 112 | 4.80e-12 | 64.7 |
| MS.gene24425.t1 | MTR_3g075500 | 27.778 | 162 | 105 | 3 | 34 | 184 | 111 | 271 | 7.16e-12 | 66.6 |
| MS.gene24425.t1 | MTR_3g075500 | 31.818 | 154 | 89 | 4 | 231 | 379 | 129 | 271 | 1.86e-11 | 65.5 |
| MS.gene24425.t1 | MTR_3g055990 | 30.000 | 180 | 109 | 6 | 213 | 383 | 8 | 179 | 8.71e-12 | 68.2 |
| MS.gene24425.t1 | MTR_3g055990 | 30.000 | 180 | 109 | 6 | 213 | 383 | 8 | 179 | 9.02e-12 | 68.2 |
| MS.gene24425.t1 | MTR_7g094670 | 23.571 | 420 | 251 | 13 | 17 | 390 | 889 | 1284 | 1.57e-11 | 68.6 |
| MS.gene24425.t1 | MTR_7g105260 | 38.272 | 81 | 49 | 1 | 115 | 194 | 27 | 107 | 3.11e-11 | 62.0 |
| MS.gene24425.t1 | MTR_5g097580 | 27.717 | 184 | 107 | 6 | 116 | 279 | 2 | 179 | 3.80e-11 | 66.2 |
| MS.gene24425.t1 | MTR_5g097580 | 27.717 | 184 | 107 | 6 | 116 | 279 | 2 | 179 | 4.04e-11 | 66.2 |
| MS.gene24425.t1 | MTR_7g107580 | 27.068 | 266 | 159 | 8 | 213 | 463 | 18 | 263 | 5.32e-11 | 65.5 |
| MS.gene24425.t1 | MTR_4g063560 | 35.802 | 81 | 51 | 1 | 115 | 194 | 28 | 108 | 6.12e-11 | 60.5 |
| MS.gene24425.t1 | MTR_2g026180 | 23.864 | 176 | 115 | 4 | 34 | 190 | 6 | 181 | 9.65e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24425.t1 | AT4G34110 | 67.791 | 652 | 180 | 6 | 1 | 645 | 1 | 629 | 0.0 | 853 |
| MS.gene24425.t1 | AT1G49760 | 67.195 | 631 | 187 | 7 | 31 | 647 | 44 | 668 | 0.0 | 815 |
| MS.gene24425.t1 | AT1G49760 | 67.195 | 631 | 187 | 7 | 31 | 647 | 44 | 668 | 0.0 | 815 |
| MS.gene24425.t1 | AT2G23350 | 64.603 | 630 | 193 | 10 | 32 | 646 | 46 | 660 | 0.0 | 791 |
| MS.gene24425.t1 | AT1G22760 | 54.160 | 637 | 264 | 13 | 2 | 625 | 23 | 644 | 0.0 | 609 |
| MS.gene24425.t1 | AT1G71770 | 53.175 | 630 | 270 | 12 | 31 | 643 | 58 | 679 | 0.0 | 597 |
| MS.gene24425.t1 | AT1G71770 | 53.175 | 630 | 270 | 12 | 31 | 643 | 58 | 679 | 0.0 | 597 |
| MS.gene24425.t1 | AT2G36660 | 39.448 | 616 | 300 | 13 | 30 | 626 | 22 | 583 | 9.85e-130 | 395 |
| MS.gene24425.t1 | AT1G34140 | 46.819 | 393 | 178 | 8 | 90 | 473 | 1 | 371 | 5.39e-111 | 340 |
| MS.gene24425.t1 | AT1G34140 | 34.629 | 283 | 168 | 4 | 33 | 300 | 32 | 312 | 2.20e-44 | 164 |
| MS.gene24425.t1 | AT1G34140 | 29.703 | 202 | 119 | 4 | 30 | 212 | 117 | 314 | 3.55e-22 | 99.8 |
| MS.gene24425.t1 | AT3G16380 | 42.995 | 414 | 222 | 7 | 33 | 437 | 22 | 430 | 2.69e-100 | 317 |
| MS.gene24425.t1 | AT3G16380 | 33.333 | 186 | 108 | 2 | 31 | 201 | 201 | 385 | 6.08e-23 | 103 |
| MS.gene24425.t1 | AT2G18510 | 36.047 | 172 | 107 | 3 | 32 | 201 | 25 | 195 | 1.11e-27 | 115 |
| MS.gene24425.t1 | AT2G18510 | 29.592 | 196 | 117 | 5 | 207 | 399 | 21 | 198 | 4.69e-16 | 80.9 |
| MS.gene24425.t1 | AT2G18510 | 25.683 | 183 | 128 | 4 | 113 | 292 | 18 | 195 | 2.70e-14 | 75.5 |
| MS.gene24425.t1 | AT1G47490 | 29.021 | 286 | 190 | 8 | 122 | 399 | 103 | 383 | 1.10e-25 | 110 |
| MS.gene24425.t1 | AT1G47490 | 26.493 | 268 | 168 | 8 | 33 | 276 | 102 | 364 | 4.16e-19 | 90.9 |
| MS.gene24425.t1 | AT1G47490 | 28.713 | 202 | 117 | 5 | 33 | 215 | 198 | 391 | 1.15e-15 | 80.1 |
| MS.gene24425.t1 | AT1G47500 | 28.866 | 291 | 184 | 10 | 122 | 399 | 105 | 385 | 2.97e-23 | 103 |
| MS.gene24425.t1 | AT1G47500 | 25.746 | 268 | 170 | 8 | 33 | 276 | 104 | 366 | 2.83e-18 | 88.2 |
| MS.gene24425.t1 | AT1G47500 | 29.208 | 202 | 116 | 5 | 33 | 215 | 200 | 393 | 1.09e-15 | 80.5 |
| MS.gene24425.t1 | AT5G54900 | 26.792 | 265 | 168 | 9 | 33 | 276 | 61 | 320 | 2.07e-22 | 100 |
| MS.gene24425.t1 | AT5G54900 | 24.910 | 277 | 195 | 10 | 110 | 380 | 51 | 320 | 5.81e-19 | 89.7 |
| MS.gene24425.t1 | AT5G54900 | 28.409 | 176 | 103 | 4 | 33 | 190 | 155 | 325 | 1.97e-13 | 72.8 |
| MS.gene24425.t1 | AT1G11650 | 28.409 | 264 | 164 | 10 | 33 | 276 | 63 | 321 | 2.56e-22 | 100 |
| MS.gene24425.t1 | AT1G11650 | 24.221 | 289 | 208 | 7 | 121 | 404 | 63 | 345 | 4.41e-19 | 90.5 |
| MS.gene24425.t1 | AT4G27000 | 25.856 | 263 | 171 | 8 | 33 | 276 | 81 | 338 | 9.64e-22 | 98.6 |
| MS.gene24425.t1 | AT4G27000 | 22.968 | 283 | 208 | 7 | 121 | 399 | 81 | 357 | 1.28e-17 | 86.3 |
| MS.gene24425.t1 | AT4G27000 | 27.411 | 197 | 124 | 6 | 203 | 394 | 72 | 254 | 9.67e-13 | 70.9 |
| MS.gene24425.t1 | AT5G41690 | 21.477 | 447 | 260 | 9 | 33 | 391 | 69 | 512 | 5.69e-21 | 97.8 |
| MS.gene24425.t1 | AT5G41690 | 21.477 | 447 | 260 | 9 | 33 | 391 | 69 | 512 | 5.69e-21 | 97.8 |
| MS.gene24425.t1 | AT5G41690 | 21.477 | 447 | 260 | 9 | 33 | 391 | 69 | 512 | 5.69e-21 | 97.8 |
| MS.gene24425.t1 | AT1G11650 | 28.455 | 246 | 151 | 10 | 33 | 258 | 63 | 303 | 2.77e-20 | 92.4 |
| MS.gene24425.t1 | AT1G11650 | 25.403 | 248 | 174 | 7 | 121 | 363 | 63 | 304 | 3.80e-17 | 83.2 |
| MS.gene24425.t1 | AT5G19350 | 24.453 | 274 | 172 | 7 | 33 | 276 | 25 | 293 | 6.33e-20 | 93.2 |
| MS.gene24425.t1 | AT5G19350 | 24.088 | 274 | 189 | 5 | 121 | 380 | 25 | 293 | 5.85e-18 | 87.4 |
| MS.gene24425.t1 | AT5G19350 | 26.984 | 189 | 104 | 4 | 33 | 192 | 117 | 300 | 1.42e-13 | 73.6 |
| MS.gene24425.t1 | AT5G19350 | 23.741 | 278 | 173 | 7 | 33 | 276 | 25 | 297 | 1.33e-19 | 92.4 |
| MS.gene24425.t1 | AT5G19350 | 24.101 | 278 | 188 | 6 | 121 | 380 | 25 | 297 | 1.61e-18 | 89.0 |
| MS.gene24425.t1 | AT5G19350 | 26.425 | 193 | 104 | 4 | 33 | 192 | 117 | 304 | 4.02e-13 | 72.4 |
| MS.gene24425.t1 | AT5G19350 | 24.017 | 229 | 142 | 7 | 209 | 425 | 22 | 230 | 4.89e-12 | 68.9 |
| MS.gene24425.t1 | AT1G49600 | 27.206 | 272 | 180 | 9 | 122 | 380 | 121 | 387 | 2.09e-19 | 92.0 |
| MS.gene24425.t1 | AT1G49600 | 26.374 | 273 | 167 | 7 | 33 | 276 | 120 | 387 | 3.05e-18 | 88.2 |
| MS.gene24425.t1 | AT1G49600 | 30.189 | 212 | 113 | 6 | 33 | 216 | 214 | 418 | 1.28e-14 | 77.0 |
| MS.gene24425.t1 | AT1G54080 | 28.369 | 282 | 166 | 9 | 111 | 372 | 58 | 323 | 2.67e-19 | 91.3 |
| MS.gene24425.t1 | AT1G54080 | 28.495 | 186 | 113 | 3 | 208 | 392 | 60 | 226 | 2.55e-15 | 79.0 |
| MS.gene24425.t1 | AT1G49600 | 27.206 | 272 | 180 | 9 | 122 | 380 | 121 | 387 | 2.84e-19 | 91.7 |
| MS.gene24425.t1 | AT1G49600 | 26.374 | 273 | 167 | 7 | 33 | 276 | 120 | 387 | 2.56e-18 | 88.6 |
| MS.gene24425.t1 | AT1G49600 | 27.206 | 272 | 180 | 9 | 122 | 380 | 121 | 387 | 2.84e-19 | 91.7 |
| MS.gene24425.t1 | AT1G49600 | 26.374 | 273 | 167 | 7 | 33 | 276 | 120 | 387 | 2.56e-18 | 88.6 |
| MS.gene24425.t1 | AT1G45100 | 22.739 | 387 | 258 | 10 | 30 | 381 | 62 | 442 | 2.89e-19 | 92.0 |
| MS.gene24425.t1 | AT1G45100 | 25.342 | 292 | 173 | 6 | 25 | 274 | 151 | 439 | 2.76e-16 | 82.4 |
| MS.gene24425.t1 | AT3G14100 | 26.199 | 271 | 162 | 6 | 33 | 272 | 60 | 323 | 5.96e-19 | 90.5 |
| MS.gene24425.t1 | AT3G14100 | 27.660 | 282 | 168 | 10 | 111 | 372 | 54 | 319 | 9.68e-18 | 86.7 |
| MS.gene24425.t1 | AT3G14100 | 29.121 | 182 | 109 | 3 | 212 | 392 | 60 | 222 | 2.68e-15 | 79.0 |
| MS.gene24425.t1 | AT3G19130 | 25.714 | 280 | 165 | 8 | 33 | 276 | 109 | 381 | 1.28e-18 | 89.4 |
| MS.gene24425.t1 | AT3G19130 | 27.240 | 279 | 176 | 9 | 122 | 380 | 110 | 381 | 1.90e-18 | 89.0 |
| MS.gene24425.t1 | AT1G17370 | 26.619 | 278 | 173 | 7 | 111 | 372 | 49 | 311 | 1.53e-18 | 89.0 |
| MS.gene24425.t1 | AT1G17370 | 25.556 | 270 | 162 | 7 | 33 | 272 | 55 | 315 | 3.55e-17 | 84.7 |
| MS.gene24425.t1 | AT1G17370 | 27.473 | 182 | 112 | 3 | 212 | 392 | 55 | 217 | 1.16e-12 | 70.9 |
| MS.gene24425.t1 | AT1G17370 | 27.758 | 281 | 169 | 10 | 111 | 372 | 49 | 314 | 2.13e-18 | 88.6 |
| MS.gene24425.t1 | AT1G17370 | 24.723 | 271 | 166 | 6 | 33 | 272 | 55 | 318 | 9.50e-17 | 83.6 |
| MS.gene24425.t1 | AT1G17370 | 27.473 | 182 | 112 | 3 | 212 | 392 | 55 | 217 | 1.36e-12 | 70.5 |
| MS.gene24425.t1 | AT1G54080 | 27.622 | 286 | 167 | 9 | 111 | 372 | 58 | 327 | 5.56e-18 | 87.4 |
| MS.gene24425.t1 | AT1G54080 | 28.947 | 190 | 111 | 4 | 208 | 392 | 60 | 230 | 3.76e-15 | 78.6 |
| MS.gene24425.t1 | AT2G15500 | 33.333 | 171 | 47 | 4 | 267 | 437 | 29 | 132 | 4.24e-17 | 78.6 |
| MS.gene24425.t1 | AT3G19350 | 51.389 | 72 | 35 | 0 | 560 | 631 | 23 | 94 | 1.04e-16 | 76.6 |
| MS.gene24425.t1 | AT4G00830 | 26.861 | 309 | 189 | 12 | 96 | 397 | 95 | 373 | 5.85e-16 | 81.6 |
| MS.gene24425.t1 | AT4G00830 | 24.542 | 273 | 184 | 7 | 32 | 295 | 116 | 375 | 2.39e-11 | 67.0 |
| MS.gene24425.t1 | AT4G00830 | 26.861 | 309 | 189 | 12 | 96 | 397 | 95 | 373 | 5.85e-16 | 81.6 |
| MS.gene24425.t1 | AT4G00830 | 24.542 | 273 | 184 | 7 | 32 | 295 | 116 | 375 | 2.39e-11 | 67.0 |
| MS.gene24425.t1 | AT4G00830 | 26.861 | 309 | 189 | 12 | 96 | 397 | 95 | 373 | 5.85e-16 | 81.6 |
| MS.gene24425.t1 | AT4G00830 | 24.542 | 273 | 184 | 7 | 32 | 295 | 116 | 375 | 2.39e-11 | 67.0 |
| MS.gene24425.t1 | AT2G37220 | 28.191 | 188 | 107 | 3 | 34 | 194 | 93 | 279 | 1.38e-15 | 78.2 |
| MS.gene24425.t1 | AT2G37220 | 25.871 | 201 | 126 | 3 | 117 | 294 | 88 | 288 | 7.45e-13 | 70.1 |
| MS.gene24425.t1 | AT3G52150 | 31.765 | 170 | 110 | 4 | 213 | 380 | 78 | 243 | 1.59e-15 | 77.4 |
| MS.gene24425.t1 | AT3G52150 | 28.421 | 190 | 117 | 5 | 111 | 286 | 69 | 253 | 2.63e-13 | 70.9 |
| MS.gene24425.t1 | AT3G52150 | 26.590 | 173 | 113 | 3 | 34 | 192 | 78 | 250 | 3.86e-13 | 70.5 |
| MS.gene24425.t1 | AT3G52150 | 31.765 | 170 | 110 | 4 | 213 | 380 | 78 | 243 | 1.59e-15 | 77.4 |
| MS.gene24425.t1 | AT3G52150 | 28.421 | 190 | 117 | 5 | 111 | 286 | 69 | 253 | 2.63e-13 | 70.9 |
| MS.gene24425.t1 | AT3G52150 | 26.590 | 173 | 113 | 3 | 34 | 192 | 78 | 250 | 3.86e-13 | 70.5 |
| MS.gene24425.t1 | AT4G00830 | 26.948 | 308 | 182 | 12 | 96 | 397 | 95 | 365 | 8.45e-15 | 77.8 |
| MS.gene24425.t1 | AT4G00830 | 26.948 | 308 | 182 | 12 | 96 | 397 | 95 | 365 | 8.45e-15 | 77.8 |
| MS.gene24425.t1 | AT2G35410 | 27.660 | 188 | 117 | 3 | 213 | 392 | 97 | 273 | 3.06e-14 | 74.7 |
| MS.gene24425.t1 | AT2G44710 | 21.951 | 287 | 201 | 7 | 5 | 280 | 102 | 376 | 3.14e-14 | 76.6 |
| MS.gene24425.t1 | AT2G44710 | 21.951 | 287 | 201 | 7 | 5 | 280 | 187 | 461 | 4.45e-14 | 76.3 |
| MS.gene24425.t1 | AT2G44710 | 21.951 | 287 | 201 | 7 | 5 | 280 | 187 | 461 | 4.45e-14 | 76.3 |
| MS.gene24425.t1 | AT4G16280 | 28.662 | 157 | 105 | 3 | 31 | 182 | 119 | 273 | 4.74e-14 | 75.9 |
| MS.gene24425.t1 | AT4G16280 | 25.000 | 220 | 137 | 6 | 182 | 396 | 99 | 295 | 1.64e-13 | 73.9 |
| MS.gene24425.t1 | AT1G01080 | 26.702 | 191 | 125 | 5 | 115 | 291 | 103 | 292 | 4.93e-14 | 73.6 |
| MS.gene24425.t1 | AT1G01080 | 26.562 | 192 | 125 | 5 | 115 | 291 | 103 | 293 | 5.32e-14 | 73.6 |
| MS.gene24425.t1 | AT4G00830 | 24.938 | 401 | 235 | 16 | 120 | 493 | 116 | 477 | 6.74e-14 | 75.1 |
| MS.gene24425.t1 | AT3G52380 | 24.855 | 173 | 114 | 3 | 34 | 190 | 118 | 290 | 6.81e-14 | 73.9 |
| MS.gene24425.t1 | AT3G52380 | 29.570 | 186 | 115 | 5 | 122 | 294 | 118 | 300 | 3.04e-13 | 71.6 |
| MS.gene24425.t1 | AT3G52380 | 28.261 | 184 | 128 | 3 | 213 | 394 | 118 | 299 | 1.08e-11 | 67.0 |
| MS.gene24425.t1 | AT4G16280 | 28.662 | 157 | 105 | 3 | 31 | 182 | 44 | 198 | 8.74e-14 | 75.1 |
| MS.gene24425.t1 | AT4G16280 | 25.000 | 220 | 137 | 6 | 182 | 396 | 24 | 220 | 2.67e-13 | 73.6 |
| MS.gene24425.t1 | AT4G16280 | 28.662 | 157 | 105 | 3 | 31 | 182 | 119 | 273 | 1.00e-13 | 75.1 |
| MS.gene24425.t1 | AT4G16280 | 25.000 | 220 | 137 | 6 | 182 | 396 | 99 | 295 | 3.09e-13 | 73.6 |
| MS.gene24425.t1 | AT3G13224 | 28.488 | 172 | 119 | 3 | 120 | 289 | 19 | 188 | 7.83e-13 | 70.9 |
| MS.gene24425.t1 | AT3G13224 | 25.444 | 169 | 103 | 4 | 213 | 376 | 21 | 171 | 2.07e-11 | 66.6 |
| MS.gene24425.t1 | AT3G13224 | 28.824 | 170 | 117 | 3 | 122 | 289 | 12 | 179 | 8.93e-13 | 70.5 |
| MS.gene24425.t1 | AT3G13224 | 25.444 | 169 | 103 | 4 | 213 | 376 | 12 | 162 | 1.95e-11 | 66.6 |
| MS.gene24425.t1 | AT1G47490 | 27.485 | 171 | 114 | 5 | 33 | 193 | 102 | 272 | 9.97e-13 | 70.1 |
| MS.gene24425.t1 | AT1G47490 | 27.957 | 186 | 127 | 6 | 122 | 300 | 103 | 288 | 2.40e-12 | 68.9 |
| MS.gene24425.t1 | AT1G60000 | 24.719 | 178 | 129 | 2 | 20 | 192 | 73 | 250 | 1.52e-12 | 68.6 |
| MS.gene24425.t1 | AT1G17640 | 27.094 | 203 | 137 | 6 | 109 | 302 | 55 | 255 | 1.64e-12 | 70.1 |
| MS.gene24425.t1 | AT1G17640 | 27.094 | 203 | 137 | 6 | 109 | 302 | 55 | 255 | 1.64e-12 | 70.1 |
| MS.gene24425.t1 | AT1G17640 | 27.094 | 203 | 137 | 6 | 109 | 302 | 55 | 255 | 1.64e-12 | 70.1 |
| MS.gene24425.t1 | AT2G16940 | 27.381 | 168 | 104 | 3 | 33 | 184 | 42 | 207 | 2.47e-12 | 69.7 |
| MS.gene24425.t1 | AT2G16940 | 27.381 | 168 | 104 | 3 | 33 | 184 | 42 | 207 | 2.47e-12 | 69.7 |
| MS.gene24425.t1 | AT1G01080 | 27.168 | 173 | 111 | 5 | 115 | 273 | 103 | 274 | 3.42e-12 | 68.2 |
| MS.gene24425.t1 | AT1G47500 | 26.901 | 171 | 115 | 5 | 33 | 193 | 104 | 274 | 4.01e-12 | 68.2 |
| MS.gene24425.t1 | AT2G16940 | 27.381 | 168 | 104 | 3 | 33 | 184 | 183 | 348 | 4.29e-12 | 69.7 |
| MS.gene24425.t1 | AT5G55550 | 30.168 | 179 | 114 | 5 | 213 | 383 | 8 | 183 | 8.05e-12 | 68.2 |
| MS.gene24425.t1 | AT5G55550 | 30.168 | 179 | 114 | 5 | 213 | 383 | 8 | 183 | 8.05e-12 | 68.2 |
| MS.gene24425.t1 | AT5G55550 | 30.168 | 179 | 114 | 5 | 213 | 383 | 8 | 183 | 8.05e-12 | 68.2 |
| MS.gene24425.t1 | AT5G55550 | 30.168 | 179 | 114 | 5 | 213 | 383 | 8 | 183 | 8.05e-12 | 68.2 |
| MS.gene24425.t1 | AT5G55550 | 30.168 | 179 | 114 | 5 | 213 | 383 | 8 | 183 | 8.05e-12 | 68.2 |
| MS.gene24425.t1 | AT2G16940 | 27.381 | 168 | 104 | 3 | 33 | 184 | 232 | 397 | 8.34e-12 | 68.9 |
| MS.gene24425.t1 | AT5G55550 | 30.168 | 179 | 114 | 5 | 213 | 383 | 8 | 183 | 1.07e-11 | 68.2 |
| MS.gene24425.t1 | AT5G55550 | 30.168 | 179 | 114 | 5 | 213 | 383 | 8 | 183 | 1.07e-11 | 68.2 |
| MS.gene24425.t1 | AT5G55550 | 30.168 | 179 | 114 | 5 | 213 | 383 | 8 | 183 | 1.07e-11 | 68.2 |
| MS.gene24425.t1 | AT5G55550 | 30.168 | 179 | 114 | 5 | 213 | 383 | 8 | 183 | 1.07e-11 | 68.2 |
| MS.gene24425.t1 | AT5G47620 | 27.222 | 180 | 114 | 5 | 213 | 383 | 8 | 179 | 1.31e-11 | 67.4 |
| MS.gene24425.t1 | AT5G47620 | 27.222 | 180 | 114 | 5 | 213 | 383 | 8 | 179 | 1.31e-11 | 67.4 |
| MS.gene24425.t1 | AT5G47620 | 27.222 | 180 | 114 | 5 | 213 | 383 | 8 | 179 | 1.31e-11 | 67.4 |
| MS.gene24425.t1 | AT5G50250 | 26.946 | 167 | 113 | 3 | 34 | 192 | 115 | 280 | 1.37e-11 | 66.2 |
| MS.gene24425.t1 | AT5G50250 | 28.571 | 161 | 102 | 4 | 237 | 396 | 141 | 289 | 1.55e-11 | 66.2 |
| MS.gene24425.t1 | AT4G19610 | 23.971 | 413 | 245 | 13 | 31 | 393 | 293 | 686 | 2.29e-11 | 67.8 |
| MS.gene24425.t1 | AT5G03580 | 37.805 | 82 | 51 | 0 | 316 | 397 | 18 | 99 | 2.83e-11 | 60.8 |
| MS.gene24425.t1 | AT4G24770 | 26.946 | 167 | 113 | 3 | 34 | 192 | 152 | 317 | 2.91e-11 | 65.9 |
| MS.gene24425.t1 | AT4G24770 | 26.946 | 167 | 113 | 3 | 34 | 192 | 152 | 317 | 2.91e-11 | 65.9 |
| MS.gene24425.t1 | AT2G47310 | 25.871 | 201 | 129 | 5 | 213 | 405 | 112 | 300 | 3.22e-11 | 66.6 |
| MS.gene24425.t1 | AT4G26650 | 28.205 | 195 | 114 | 8 | 206 | 383 | 7 | 192 | 3.93e-11 | 66.2 |
| MS.gene24425.t1 | AT4G26650 | 28.205 | 195 | 114 | 8 | 206 | 383 | 10 | 195 | 4.00e-11 | 66.2 |
| MS.gene24425.t1 | AT5G47620 | 28.351 | 194 | 116 | 7 | 213 | 383 | 8 | 201 | 4.42e-11 | 65.9 |
| MS.gene24425.t1 | AT3G13224 | 25.444 | 169 | 103 | 4 | 213 | 376 | 21 | 171 | 5.85e-11 | 63.5 |
| MS.gene24425.t1 | AT4G14300 | 28.333 | 180 | 116 | 7 | 213 | 383 | 8 | 183 | 8.18e-11 | 65.1 |
| MS.gene24425.t1 | AT4G14300 | 28.333 | 180 | 116 | 7 | 213 | 383 | 8 | 183 | 8.18e-11 | 65.1 |
| MS.gene24425.t1 | AT5G40490 | 27.108 | 166 | 102 | 5 | 213 | 376 | 44 | 192 | 9.85e-11 | 64.7 |
Find 163 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACAGTCCTCTGCTGTTC+AGG | 0.204464 | 1.1:+3895162 | None:intergenic |
| CTCTGAACAACAAATCTATT+AGG | 0.219365 | 1.1:-3899023 | MS.gene24425:CDS |
| AATGCAATTGATAAGTTAAA+TGG | 0.241081 | 1.1:-3897948 | MS.gene24425:CDS |
| AGTTTCAATGGCGCAGATTC+AGG | 0.270119 | 1.1:-3899435 | None:intergenic |
| TAATAAATGCAGGCTGGATT+TGG | 0.270901 | 1.1:-3895617 | MS.gene24425:intron |
| ACTCGTCGTTCGCTTGGTTA+TGG | 0.285708 | 1.1:-3899224 | MS.gene24425:CDS |
| GATCCTCTGCTGACACCATT+TGG | 0.296178 | 1.1:+3897321 | None:intergenic |
| TAAGGTTACCGGCATGCTTC+TGG | 0.306768 | 1.1:-3894967 | MS.gene24425:CDS |
| TATCAGCAGCAGCTTGTTCC+TGG | 0.324866 | 1.1:-3895593 | MS.gene24425:CDS |
| AAGGAAATGTTCTCTGAGTT+TGG | 0.327154 | 1.1:-3897477 | MS.gene24425:CDS |
| CTCTTGTATGGTTAGATGCT+TGG | 0.332525 | 1.1:-3895038 | MS.gene24425:intron |
| TTATTCAGCGGCTAGGGCTT+TGG | 0.337471 | 1.1:-3899064 | MS.gene24425:intron |
| CAGAATCCTCAGCCTCAAAT+TGG | 0.340771 | 1.1:+3897976 | None:intergenic |
| GGTTAGGGTTTGTAGGGATT+TGG | 0.342224 | 1.1:-3899249 | MS.gene24425:CDS |
| CAGACCTGCTGCTGCATCAT+TGG | 0.343150 | 1.1:+3895449 | None:intergenic |
| GATGGTAGGTCGAAGTGTTT+TGG | 0.349566 | 1.1:-3897732 | MS.gene24425:CDS |
| TCTGAACAACAAATCTATTA+GGG | 0.353328 | 1.1:-3899022 | MS.gene24425:CDS |
| ATCCTCTGCTGACACCATTT+GGG | 0.353883 | 1.1:+3897322 | None:intergenic |
| CTTCCGTAAATAACTCTGAT+AGG | 0.359452 | 1.1:+3897820 | None:intergenic |
| AAACCTATCAGAGTTATTTA+CGG | 0.360802 | 1.1:-3897823 | MS.gene24425:CDS |
| TGGTTTCGGTTAGGGTTTGT+AGG | 0.361667 | 1.1:-3899256 | MS.gene24425:CDS |
| CTCTACCCTCCTGGTACTCC+TGG | 0.376806 | 1.1:-3896017 | MS.gene24425:CDS |
| CTTTGTTCCAATGGTTCAGC+AGG | 0.383917 | 1.1:-3895537 | MS.gene24425:CDS |
| TGGACAAGTGGTTTCGGTTA+GGG | 0.384091 | 1.1:-3899264 | MS.gene24425:CDS |
| AGGAGGGTAGAGTGGCATTC+GGG | 0.388711 | 1.1:+3896028 | None:intergenic |
| ACCCATGCCCATTCATGCTT+TGG | 0.389513 | 1.1:-3895208 | MS.gene24425:CDS |
| TCAATCAAATGCAATACTTC+AGG | 0.395049 | 1.1:+3894933 | None:intergenic |
| TTGGACAAGTGGTTTCGGTT+AGG | 0.396239 | 1.1:-3899265 | MS.gene24425:CDS |
| GCATCATTGGCACTTGCTGT+GGG | 0.397308 | 1.1:+3895462 | None:intergenic |
| AAAATGAATTTGGAGCTTAT+GGG | 0.402355 | 1.1:-3897788 | MS.gene24425:CDS |
| ACTTGTGGAGGCATCATAGC+TGG | 0.406997 | 1.1:+3895960 | None:intergenic |
| TACGATCACTTTAATCAAGT+TGG | 0.414109 | 1.1:-3899284 | MS.gene24425:CDS |
| TCAAGTTGGACAAGTGGTTT+CGG | 0.415703 | 1.1:-3899270 | MS.gene24425:CDS |
| TGCTGTAGCCAAAGCATGAA+TGG | 0.417507 | 1.1:+3895200 | None:intergenic |
| TTGGCTACTCGTCGTTCGCT+TGG | 0.419741 | 1.1:-3899230 | MS.gene24425:CDS |
| CACCAGGGCGCTGACCTTGT+TGG | 0.423565 | 1.1:+3895513 | None:intergenic |
| TGTTGGCCCTGCTGAACCAT+TGG | 0.424438 | 1.1:+3895530 | None:intergenic |
| ACTTTAGCCTTGAGAGCATC+TGG | 0.424674 | 1.1:+3894906 | None:intergenic |
| CAGGAGGGTAGAGTGGCATT+CGG | 0.428140 | 1.1:+3896027 | None:intergenic |
| AATGGTGTCAGCAGAGGATC+TGG | 0.430305 | 1.1:-3897318 | MS.gene24425:CDS |
| GATTCAGCAGCTAAGGTTAC+CGG | 0.435182 | 1.1:-3894978 | MS.gene24425:CDS |
| TGCATCATTGGCACTTGCTG+TGG | 0.436359 | 1.1:+3895461 | None:intergenic |
| TGGCAAACCTCCCATGTCAT+AGG | 0.438185 | 1.1:+3895248 | None:intergenic |
| AGATAGAAGAGCAAGATTGC+AGG | 0.438389 | 1.1:-3897096 | MS.gene24425:intron |
| TTGTTGTTTATTCAGCGGCT+AGG | 0.443885 | 1.1:-3899071 | MS.gene24425:intron |
| CTTGGACAACAATTTATGTA+TGG | 0.445463 | 1.1:-3895993 | MS.gene24425:CDS |
| GGACCTCCTCGGCGTCCACC+AGG | 0.449158 | 1.1:+3895497 | None:intergenic |
| ACAGAAGGTGTAATTGCAAC+AGG | 0.450131 | 1.1:+3896056 | None:intergenic |
| GTGCCGCTCTTGCGACTACT+AGG | 0.451348 | 1.1:+3898979 | None:intergenic |
| CGTGTTTATCGCTACCCTCC+TGG | 0.451898 | 1.1:-3895324 | MS.gene24425:CDS |
| GGTGGACGCCGAGGAGGTCC+TGG | 0.452687 | 1.1:-3895494 | MS.gene24425:CDS |
| GCCAAGCTACTTTGTTCCAA+TGG | 0.453307 | 1.1:-3895546 | MS.gene24425:CDS |
| CTTGTTCCTGGGATGAGACC+TGG | 0.460712 | 1.1:-3895581 | MS.gene24425:CDS |
| CCGTTTGAAGGTGCTGGAAT+CGG | 0.466182 | 1.1:+3899392 | None:intergenic |
| CCTCCTGGTACTCCTGGTCT+TGG | 0.467154 | 1.1:-3896011 | MS.gene24425:CDS |
| AATGACAAGCAGGTGTTTGT+GGG | 0.470614 | 1.1:-3897915 | MS.gene24425:CDS |
| ACAGCTCTTGATGCTTCCTC+TGG | 0.471511 | 1.1:+3897276 | None:intergenic |
| GGTTTCGGTTAGGGTTTGTA+GGG | 0.477071 | 1.1:-3899255 | MS.gene24425:CDS |
| TCTGGTCAGTCTAAAGGCTA+TGG | 0.478122 | 1.1:-3898005 | MS.gene24425:CDS |
| TACCGGCATGCTTCTGGAGA+TGG | 0.481524 | 1.1:-3894961 | MS.gene24425:CDS |
| ATCATTGGCACTTGCTGTGG+GGG | 0.483844 | 1.1:+3895464 | None:intergenic |
| TGTTAATTTCACTAACCCTC+AGG | 0.485000 | 1.1:-3899198 | MS.gene24425:CDS |
| CAATGACAAGCAGGTGTTTG+TGG | 0.487408 | 1.1:-3897916 | MS.gene24425:CDS |
| GAAACGACGCTGCCGTTTGA+AGG | 0.492756 | 1.1:+3899380 | None:intergenic |
| CTTGTGGAGGCATCATAGCT+GGG | 0.501490 | 1.1:+3895961 | None:intergenic |
| TGTTGTTTATTCAGCGGCTA+GGG | 0.503322 | 1.1:-3899070 | MS.gene24425:intron |
| TAGCGATAAACACGTTGCCT+TGG | 0.505854 | 1.1:+3895333 | None:intergenic |
| TGTCCAAGACCAGGAGTACC+AGG | 0.506114 | 1.1:+3896008 | None:intergenic |
| TTACAGTCCTCTGCTGTTCA+GGG | 0.507255 | 1.1:+3895163 | None:intergenic |
| GATGGTTCTGGTCAGTCTAA+AGG | 0.507826 | 1.1:-3898011 | MS.gene24425:CDS |
| CATCAAAACAGCACTAGTAA+TGG | 0.509723 | 1.1:+3897764 | None:intergenic |
| AAAATAGCAACTGATGGTTC+TGG | 0.512739 | 1.1:-3898023 | MS.gene24425:CDS |
| CAGATTATGCGAGACCCAAA+TGG | 0.514056 | 1.1:-3897336 | MS.gene24425:CDS |
| AGTGCCAATGATGCAGCAGC+AGG | 0.515523 | 1.1:-3895453 | MS.gene24425:intron |
| TCTTGAATGTTGCTGCGACC+AGG | 0.516671 | 1.1:+3895306 | None:intergenic |
| GGCATTCGGGGCGCAACAGA+AGG | 0.519691 | 1.1:+3896041 | None:intergenic |
| TGGCACAATTACTTCGTACA+AGG | 0.519922 | 1.1:-3897457 | MS.gene24425:intron |
| GAAGGTGCTGGAATCGGTGC+CGG | 0.524445 | 1.1:+3899398 | None:intergenic |
| CTAATAGATTTGTTGTTCAG+AGG | 0.526125 | 1.1:+3899024 | None:intergenic |
| GGCCAACAAGGTCAGCGCCC+TGG | 0.527805 | 1.1:-3895515 | MS.gene24425:CDS |
| GTTGTTGACCAGGACCTCCT+CGG | 0.528383 | 1.1:+3895486 | None:intergenic |
| TTGCAGCTTGGAGAGATGAA+TGG | 0.529066 | 1.1:-3897170 | MS.gene24425:intron |
| TCTGTAGTAGACAAATTTCA+AGG | 0.530372 | 1.1:-3897552 | MS.gene24425:CDS |
| GGCTAAAGTTGCTGAAGCCA+TGG | 0.530907 | 1.1:-3894892 | MS.gene24425:CDS |
| ACGCTGCCGTTTGAAGGTGC+TGG | 0.534574 | 1.1:+3899386 | None:intergenic |
| GTATCCGCTAGTAGATCAGC+TGG | 0.539041 | 1.1:-3895006 | MS.gene24425:CDS |
| GCTGTAGCCAAAGCATGAAT+GGG | 0.539748 | 1.1:+3895201 | None:intergenic |
| CATCATTGGCACTTGCTGTG+GGG | 0.539865 | 1.1:+3895463 | None:intergenic |
| AGTGAGGCTAGTTGATCCGC+CGG | 0.541519 | 1.1:+3894831 | None:intergenic |
| TGAGTCACCAGATGCTCTCA+AGG | 0.542342 | 1.1:-3894913 | MS.gene24425:CDS |
| AAGGTTTGAGCAGACTGTAA+AGG | 0.546711 | 1.1:-3897577 | MS.gene24425:CDS |
| GGAACATGATTCAGCAGCTA+AGG | 0.546851 | 1.1:-3894985 | MS.gene24425:CDS |
| ATCAGCAGCAGCTTGTTCCT+GGG | 0.547574 | 1.1:-3895592 | MS.gene24425:CDS |
| CCGATTCCAGCACCTTCAAA+CGG | 0.550647 | 1.1:-3899392 | MS.gene24425:CDS |
| CGCCCTGGTGGACGCCGAGG+AGG | 0.553565 | 1.1:-3895500 | MS.gene24425:CDS |
| AACATTTCTCAAAACCTCCA+TGG | 0.553981 | 1.1:+3894875 | None:intergenic |
| ACCATTGGAACAAAGTAGCT+TGG | 0.559188 | 1.1:+3895545 | None:intergenic |
| GACCTCCTCGGCGTCCACCA+GGG | 0.561701 | 1.1:+3895498 | None:intergenic |
| GTCCATCTCCAGAAGCATGC+CGG | 0.562964 | 1.1:+3894959 | None:intergenic |
| TGTTGCTGTTGCACAGCGAA+AGG | 0.568244 | 1.1:-3897120 | MS.gene24425:CDS |
| CTTTAATCAAGTTGGACAAG+TGG | 0.569030 | 1.1:-3899276 | MS.gene24425:CDS |
| CGAATGCCACTCTACCCTCC+TGG | 0.569240 | 1.1:-3896026 | MS.gene24425:CDS |
| GACGTCGTAACGAACTGATT+CGG | 0.574989 | 1.1:+3899353 | None:intergenic |
| TATGATAATCATACTTGTGG+AGG | 0.575760 | 1.1:+3895948 | None:intergenic |
| ACAGTCCTCTGCTGTTCAGG+GGG | 0.577307 | 1.1:+3895165 | None:intergenic |
| GATGACAAGGAGTGGTATGT+TGG | 0.578166 | 1.1:-3897642 | MS.gene24425:CDS |
| GGAGTACCAGGAGGGTAGAG+TGG | 0.578299 | 1.1:+3896020 | None:intergenic |
| AGATGCTGCTAAAGCTGTTG+AGG | 0.579437 | 1.1:-3897685 | MS.gene24425:CDS |
| GCCCCTGTGCAAAACATTGG+TGG | 0.580664 | 1.1:-3895282 | MS.gene24425:CDS |
| GTATGGTTAGATGCTTGGAG+AGG | 0.583459 | 1.1:-3895033 | MS.gene24425:intron |
| ATGGTTCAGCAGGGCCAACA+AGG | 0.583994 | 1.1:-3895527 | MS.gene24425:CDS |
| CCTGGGATGAGACCTGGTGG+TGG | 0.588301 | 1.1:-3895575 | MS.gene24425:CDS |
| GGAACAAAGTAGCTTGGCAT+AGG | 0.588556 | 1.1:+3895551 | None:intergenic |
| AGCCAAAGCATGAATGGGCA+TGG | 0.590578 | 1.1:+3895206 | None:intergenic |
| AATTTCACTAACCCTCAGGA+TGG | 0.592051 | 1.1:-3899194 | MS.gene24425:intron |
| GTTACGACGTCGTTGTACGT+TGG | 0.592079 | 1.1:-3899341 | MS.gene24425:CDS |
| AACGAAACTAACCATCCTGA+GGG | 0.595204 | 1.1:+3899183 | None:intergenic |
| CCACCACCAGGTCTCATCCC+AGG | 0.598755 | 1.1:+3895575 | None:intergenic |
| TCAAATGCAATACTTCAGGC+TGG | 0.601392 | 1.1:+3894937 | None:intergenic |
| CAACAATTTATGTATGGCCA+AGG | 0.601992 | 1.1:-3895987 | MS.gene24425:CDS |
| TCTTGCAAAATAGCAACTGA+TGG | 0.602362 | 1.1:-3898029 | MS.gene24425:CDS |
| AAAGCTGTTGAGGCATTGAA+TGG | 0.605011 | 1.1:-3897675 | MS.gene24425:CDS |
| TACAGTCCTCTGCTGTTCAG+GGG | 0.607977 | 1.1:+3895164 | None:intergenic |
| GAACGTGAGCAAGAGCTGAA+AGG | 0.610322 | 1.1:-3897600 | MS.gene24425:CDS |
| TTGTGGAGGCATCATAGCTG+GGG | 0.612919 | 1.1:+3895962 | None:intergenic |
| AAAGCATGAATGGGCATGGG+TGG | 0.613260 | 1.1:+3895210 | None:intergenic |
| ATAGAGATAACGTTCTCAGT+AGG | 0.613813 | 1.1:-3897872 | MS.gene24425:CDS |
| GTGAGCAAGAGCTGAAAGGA+AGG | 0.614410 | 1.1:-3897596 | MS.gene24425:CDS |
| AGAAATGTTACTCAACAGCA+AGG | 0.614788 | 1.1:-3894861 | MS.gene24425:CDS |
| TGAATGTTGCTGCGACCAGG+AGG | 0.615427 | 1.1:+3895309 | None:intergenic |
| CAGCGCCCTGGTGGACGCCG+AGG | 0.618945 | 1.1:-3895503 | MS.gene24425:CDS |
| GACCCAAATGGTGTCAGCAG+AGG | 0.620312 | 1.1:-3897324 | MS.gene24425:CDS |
| AGAGTCGTTGAGAGAGAGTG+AGG | 0.620798 | 1.1:+3894815 | None:intergenic |
| TGATGAGAGATGCTGATGGT+AGG | 0.623806 | 1.1:-3897746 | MS.gene24425:CDS |
| GGAGGGTAGAGTGGCATTCG+GGG | 0.625817 | 1.1:+3896029 | None:intergenic |
| TTTGTTCCAATGGTTCAGCA+GGG | 0.626797 | 1.1:-3895536 | MS.gene24425:CDS |
| GTGAGGCTAGTTGATCCGCC+GGG | 0.627783 | 1.1:+3894832 | None:intergenic |
| TGTGGAGGCATCATAGCTGG+GGG | 0.627960 | 1.1:+3895963 | None:intergenic |
| AATGCTGATCAATGACAAGC+AGG | 0.628720 | 1.1:-3897925 | MS.gene24425:CDS |
| TATCTCTATCTTGCTTACGT+AGG | 0.631591 | 1.1:+3897886 | None:intergenic |
| AGGAATGATGTCCTATGACA+TGG | 0.633264 | 1.1:-3895259 | MS.gene24425:CDS |
| GATGCCCCTGTGCAAAACAT+TGG | 0.633837 | 1.1:-3895285 | MS.gene24425:CDS |
| GCCAAAGCATGAATGGGCAT+GGG | 0.635175 | 1.1:+3895207 | None:intergenic |
| ATAAATTGTTGTCCAAGACC+AGG | 0.638542 | 1.1:+3895999 | None:intergenic |
| TCAGGTTCAGCATCAAACTC+CGG | 0.642673 | 1.1:-3899417 | MS.gene24425:CDS |
| TCAACAGCAAGGAAACAGCC+CGG | 0.646568 | 1.1:-3894850 | MS.gene24425:CDS |
| CAACGAAACTAACCATCCTG+AGG | 0.649245 | 1.1:+3899182 | None:intergenic |
| CCTGTGCAAAACATTGGTGG+AGG | 0.654336 | 1.1:-3895279 | MS.gene24425:CDS |
| GTTCCTGGGATGAGACCTGG+TGG | 0.655055 | 1.1:-3895578 | MS.gene24425:CDS |
| TGTGCAACAGCAACATAGAG+AGG | 0.660072 | 1.1:+3897128 | None:intergenic |
| GATCCTAGTAGTCGCAAGAG+CGG | 0.660494 | 1.1:-3898982 | MS.gene24425:CDS |
| GGAATGATGTCCTATGACAT+GGG | 0.661604 | 1.1:-3895258 | MS.gene24425:CDS |
| CTTGGCATAGGACCACCACC+AGG | 0.662106 | 1.1:+3895563 | None:intergenic |
| GAATGTTGCTGCGACCAGGA+GGG | 0.664998 | 1.1:+3895310 | None:intergenic |
| TAAAGTTGCTGAAGCCATGG+AGG | 0.667343 | 1.1:-3894889 | MS.gene24425:CDS |
| CAAGACCAGGAGTACCAGGA+GGG | 0.671251 | 1.1:+3896012 | None:intergenic |
| GGTGGTACAACATCACGAAG+TGG | 0.685790 | 1.1:+3895228 | None:intergenic |
| TGTTCCAGCTGATCTACTAG+CGG | 0.690170 | 1.1:+3895002 | None:intergenic |
| GTTGTACGTTGGTGATCTTG+AGG | 0.704303 | 1.1:-3899330 | MS.gene24425:CDS |
| CAACAAGGTCAGCGCCCTGG+TGG | 0.709951 | 1.1:-3895512 | MS.gene24425:CDS |
| ATGATGTCCTATGACATGGG+AGG | 0.725560 | 1.1:-3895255 | MS.gene24425:CDS |
| CCAAGACCAGGAGTACCAGG+AGG | 0.726994 | 1.1:+3896011 | None:intergenic |
| ACAGCAAGGAAACAGCCCGG+CGG | 0.789531 | 1.1:-3894847 | MS.gene24425:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAGAAATAAGAAAAAA+AGG | + | chr1.1:3898071-3898090 | None:intergenic | 10.0% |
| !! | TATAAGAAATAAGAAAAAAA+GGG | + | chr1.1:3898070-3898089 | None:intergenic | 10.0% |
| !!! | TTTTTTTCTTATTTCTTATA+TGG | - | chr1.1:3898070-3898089 | MS.gene24425:CDS | 10.0% |
| !! | ATAAGAAATAAGAAAAAAAG+GGG | + | chr1.1:3898069-3898088 | None:intergenic | 15.0% |
| !! | ATTATGAATATTTATCACAT+TGG | - | chr1.1:3895390-3895409 | MS.gene24425:intron | 15.0% |
| !!! | ATTTTATATGTTTTGTGATT+AGG | - | chr1.1:3895104-3895123 | MS.gene24425:intron | 15.0% |
| !!! | TGATAAATTTTGAACTAAAT+TGG | + | chr1.1:3898590-3898609 | None:intergenic | 15.0% |
| !!! | TTTTATATGTTTTGTGATTA+GGG | - | chr1.1:3895105-3895124 | MS.gene24425:intron | 15.0% |
| !! | AAACAATTGTAAGCTAATAA+TGG | + | chr1.1:3895673-3895692 | None:intergenic | 20.0% |
| !! | AAATATGATAATCATACTTG+TGG | + | chr1.1:3898298-3898317 | None:intergenic | 20.0% |
| !! | AATGCAATTGATAAGTTAAA+TGG | - | chr1.1:3896292-3896311 | MS.gene24425:intron | 20.0% |
| !! | CACTATTATCATACAATATA+TGG | + | chr1.1:3897417-3897436 | None:intergenic | 20.0% |
| !! | CTTATCTTTGTAGAATTTAT+AGG | - | chr1.1:3895318-3895337 | MS.gene24425:CDS | 20.0% |
| !! | TACTATCAATTTAGTGTTTA+AGG | - | chr1.1:3895488-3895507 | MS.gene24425:CDS | 20.0% |
| !! | TTTATCCATAGTTTAATCAA+TGG | - | chr1.1:3895892-3895911 | MS.gene24425:intron | 20.0% |
| !!! | AATTGTTTTGTATATGGTAT+AGG | - | chr1.1:3895685-3895704 | MS.gene24425:intron | 20.0% |
| !!! | ACACTAAATTGATAGTAAAT+TGG | + | chr1.1:3895485-3895504 | None:intergenic | 20.0% |
| !!! | ATGGGTTAAAAGAATTTAAT+TGG | + | chr1.1:3896877-3896896 | None:intergenic | 20.0% |
| !!! | GAATTTATGAAAATAGCTTT+TGG | + | chr1.1:3895813-3895832 | None:intergenic | 20.0% |
| !!! | GTTGTTTTTAGAATCTATAT+TGG | - | chr1.1:3895707-3895726 | MS.gene24425:intron | 20.0% |
| !!! | TCATGAATCTTTTTTTCATT+GGG | - | chr1.1:3897444-3897463 | MS.gene24425:intron | 20.0% |
| !!! | TTCATGAATCTTTTTTTCAT+TGG | - | chr1.1:3897443-3897462 | MS.gene24425:intron | 20.0% |
| !!! | TTTCATGTTTAAGTTAATCA+AGG | + | chr1.1:3897361-3897380 | None:intergenic | 20.0% |
| ! | AAAAAAAGATTCATGAAGCT+AGG | + | chr1.1:3897440-3897459 | None:intergenic | 25.0% |
| ! | AAACCTATCAGAGTTATTTA+CGG | - | chr1.1:3896417-3896436 | MS.gene24425:intron | 25.0% |
| ! | AACAAAATAACAGCTGAATA+TGG | + | chr1.1:3898327-3898346 | None:intergenic | 25.0% |
| ! | ACAAGAGAAAATATCAGTAA+AGG | + | chr1.1:3899189-3899208 | None:intergenic | 25.0% |
| ! | ACATAAATTTAGTGACTGTT+TGG | + | chr1.1:3895838-3895857 | None:intergenic | 25.0% |
| ! | AGTCACTAAATTTATGTCAA+TGG | - | chr1.1:3895841-3895860 | MS.gene24425:intron | 25.0% |
| ! | ATCACTTCAATAATAAATGC+AGG | - | chr1.1:3898613-3898632 | MS.gene24425:intron | 25.0% |
| ! | CAAAACATGTTATATGTGAA+GGG | + | chr1.1:3898501-3898520 | None:intergenic | 25.0% |
| ! | CATAAATTTAGTGACTGTTT+GGG | + | chr1.1:3895837-3895856 | None:intergenic | 25.0% |
| ! | CATAGTTTAATCAATGGAAT+TGG | - | chr1.1:3895898-3895917 | MS.gene24425:intron | 25.0% |
| ! | CTCAGATGTTTATTTCAAAA+AGG | + | chr1.1:3895559-3895578 | None:intergenic | 25.0% |
| ! | GATGACTTGAAAAATGAATT+TGG | - | chr1.1:3896442-3896461 | MS.gene24425:intron | 25.0% |
| ! | TATACTCATCTTTCATATTG+AGG | - | chr1.1:3898847-3898866 | MS.gene24425:intron | 25.0% |
| ! | TCTGAACAACAAATCTATTA+GGG | - | chr1.1:3895218-3895237 | MS.gene24425:CDS | 25.0% |
| ! | TTTGTTGCCAAATTAAAGAT+AGG | - | chr1.1:3897720-3897739 | MS.gene24425:CDS | 25.0% |
| !! | AAAAATGAATTTGGAGCTTA+TGG | - | chr1.1:3896451-3896470 | MS.gene24425:intron | 25.0% |
| !! | AAAATGAATTTGGAGCTTAT+GGG | - | chr1.1:3896452-3896471 | MS.gene24425:intron | 25.0% |
| !! | CAAACCAATGTTATTTAACT+CGG | + | chr1.1:3897987-3898006 | None:intergenic | 25.0% |
| !! | CAATTCCATTGATTAAACTA+TGG | + | chr1.1:3895900-3895919 | None:intergenic | 25.0% |
| !! | GCTAATATTTCTGCAAATTT+GGG | - | chr1.1:3899113-3899132 | MS.gene24425:intron | 25.0% |
| !! | TACTGATATTTTCTCTTGTA+TGG | - | chr1.1:3899190-3899209 | MS.gene24425:intron | 25.0% |
| !! | TGCTAATATTTCTGCAAATT+TGG | - | chr1.1:3899112-3899131 | MS.gene24425:intron | 25.0% |
| !! | TTTTCCGAGTTAAATAACAT+TGG | - | chr1.1:3897980-3897999 | MS.gene24425:CDS | 25.0% |
| !!! | CACTGCTAATATTTTTATCA+AGG | - | chr1.1:3895281-3895300 | MS.gene24425:CDS | 25.0% |
| !!! | GCTTACAATTGTTTTGTATA+TGG | - | chr1.1:3895679-3895698 | MS.gene24425:intron | 25.0% |
| !!! | GTTGTTTTTAGAAGCTATAT+TGG | - | chr1.1:3895747-3895766 | MS.gene24425:intron | 25.0% |
| !!! | TTTTGAAATAAACATCTGAG+AGG | - | chr1.1:3895559-3895578 | MS.gene24425:CDS | 25.0% |
| !!! | TTTTGTTGTTGTTTATTCAG+CGG | - | chr1.1:3895164-3895183 | MS.gene24425:intron | 25.0% |
| AAAACAAAGTCAAGATGAAC+AGG | + | chr1.1:3898420-3898439 | None:intergenic | 30.0% | |
| AAATTAAAGATAGGAGTGGT+GGG | - | chr1.1:3897729-3897748 | MS.gene24425:CDS | 30.0% | |
| AATTTATAGGCAGTTTAGTC+AGG | - | chr1.1:3895331-3895350 | MS.gene24425:CDS | 30.0% | |
| ACAAGAAACTTTGTAAGAGA+GGG | - | chr1.1:3897234-3897253 | MS.gene24425:intron | 30.0% | |
| ACAAGACATATACAACTAAG+TGG | + | chr1.1:3895995-3896014 | None:intergenic | 30.0% | |
| ACTATATAGAGTAAGGGAAA+TGG | + | chr1.1:3898045-3898064 | None:intergenic | 30.0% | |
| ATAACTTCTGAACTACTCTT+AGG | + | chr1.1:3897179-3897198 | None:intergenic | 30.0% | |
| ATGTAAAATTTGAGAGAAGC+AGG | - | chr1.1:3895531-3895550 | MS.gene24425:CDS | 30.0% | |
| CAGAAATATTAGCAGCAAAA+AGG | + | chr1.1:3899106-3899125 | None:intergenic | 30.0% | |
| CATTACTGATGAAAAACTCA+AGG | - | chr1.1:3896744-3896763 | MS.gene24425:intron | 30.0% | |
| CTCTGAACAACAAATCTATT+AGG | - | chr1.1:3895217-3895236 | MS.gene24425:CDS | 30.0% | |
| CTTAATTACTTTCTTCATGC+AGG | - | chr1.1:3898141-3898160 | MS.gene24425:intron | 30.0% | |
| CTTGATTTATGTGAGTAGTT+TGG | - | chr1.1:3896047-3896066 | MS.gene24425:CDS | 30.0% | |
| CTTGGACAACAATTTATGTA+TGG | - | chr1.1:3898247-3898266 | MS.gene24425:intron | 30.0% | |
| GAACTTGTATCTCAAAAACT+TGG | - | chr1.1:3896714-3896733 | MS.gene24425:intron | 30.0% | |
| GCAAAACATGTTATATGTGA+AGG | + | chr1.1:3898502-3898521 | None:intergenic | 30.0% | |
| TACAAGAAACTTTGTAAGAG+AGG | - | chr1.1:3897233-3897252 | MS.gene24425:intron | 30.0% | |
| TACGATCACTTTAATCAAGT+TGG | - | chr1.1:3894956-3894975 | MS.gene24425:CDS | 30.0% | |
| TATGATAATCATACTTGTGG+AGG | + | chr1.1:3898295-3898314 | None:intergenic | 30.0% | |
| TATGGTCTATGATATGTTTG+CGG | - | chr1.1:3898088-3898107 | MS.gene24425:CDS | 30.0% | |
| TCAATCAAATGCAATACTTC+AGG | + | chr1.1:3899310-3899329 | None:intergenic | 30.0% | |
| TCTGTAGTAGACAAATTTCA+AGG | - | chr1.1:3896688-3896707 | MS.gene24425:intron | 30.0% | |
| TGTAAAATTTGAGAGAAGCA+GGG | - | chr1.1:3895532-3895551 | MS.gene24425:CDS | 30.0% | |
| TTATACTGATGCAAAACTGT+GGG | - | chr1.1:3898454-3898473 | MS.gene24425:intron | 30.0% | |
| ! | AATGGAATTGGAATTAGTCT+TGG | - | chr1.1:3895910-3895929 | MS.gene24425:intron | 30.0% |
| ! | AGCTGTAAGTCTAAAACTAT+TGG | - | chr1.1:3896981-3897000 | MS.gene24425:intron | 30.0% |
| ! | AGTTTTGCATCAGTATAACA+AGG | + | chr1.1:3898452-3898471 | None:intergenic | 30.0% |
| ! | ATGTTTTGTGATTAGGGTTT+TGG | - | chr1.1:3895111-3895130 | MS.gene24425:intron | 30.0% |
| ! | CTTGAGTTTTTCATCAGTAA+TGG | + | chr1.1:3896746-3896765 | None:intergenic | 30.0% |
| ! | TGTAAGTCTAAAACTATTGG+TGG | - | chr1.1:3896984-3897003 | MS.gene24425:intron | 30.0% |
| !! | ATAATCTCCTGTATCGATTT+CGG | + | chr1.1:3895375-3895394 | None:intergenic | 30.0% |
| !! | CTAATAGATTTGTTGTTCAG+AGG | + | chr1.1:3895219-3895238 | None:intergenic | 30.0% |
| !! | CTTTTAACTGATATCTGTGT+CGG | - | chr1.1:3896820-3896839 | MS.gene24425:intron | 30.0% |
| !! | TGGTAAAAAAGTTGATGACA+AGG | - | chr1.1:3896585-3896604 | MS.gene24425:intron | 30.0% |
| !!! | CATGACACTTTTTCTTCTTT+CGG | - | chr1.1:3896178-3896197 | MS.gene24425:intron | 30.0% |
| !!! | CTTGACTTTGTTTTACTTGT+GGG | - | chr1.1:3898426-3898445 | MS.gene24425:intron | 30.0% |
| !!! | TCTTGACTTTGTTTTACTTG+TGG | - | chr1.1:3898425-3898444 | MS.gene24425:intron | 30.0% |
| AAAACTCATCAACTCAGTTG+GGG | + | chr1.1:3897964-3897983 | None:intergenic | 35.0% | |
| AAAATAGCAACTGATGGTTC+TGG | - | chr1.1:3896217-3896236 | MS.gene24425:intron | 35.0% | |
| AAATAACAGCTGAATATGGC+AGG | + | chr1.1:3898323-3898342 | None:intergenic | 35.0% | |
| AACATTTCTCAAAACCTCCA+TGG | + | chr1.1:3899368-3899387 | None:intergenic | 35.0% | |
| AAGGAAATGTTCTCTGAGTT+TGG | - | chr1.1:3896763-3896782 | MS.gene24425:intron | 35.0% | |
| ACCTACTTGTCGTTAAATGT+AGG | + | chr1.1:3895418-3895437 | None:intergenic | 35.0% | |
| AGAAATGTTACTCAACAGCA+AGG | - | chr1.1:3899379-3899398 | MS.gene24425:CDS | 35.0% | |
| ATAAATTGTTGTCCAAGACC+AGG | + | chr1.1:3898244-3898263 | None:intergenic | 35.0% | |
| ATAGAGATAACGTTCTCAGT+AGG | - | chr1.1:3896368-3896387 | MS.gene24425:intron | 35.0% | |
| CAAATTAAAGATAGGAGTGG+TGG | - | chr1.1:3897728-3897747 | MS.gene24425:CDS | 35.0% | |
| CAACAATTTATGTATGGCCA+AGG | - | chr1.1:3898253-3898272 | MS.gene24425:intron | 35.0% | |
| CACCACTCCTATCTTTAATT+TGG | + | chr1.1:3897730-3897749 | None:intergenic | 35.0% | |
| CATCAAAACAGCACTAGTAA+TGG | + | chr1.1:3896479-3896498 | None:intergenic | 35.0% | |
| CATTTCAATTGAACTGAACC+TGG | - | chr1.1:3896092-3896111 | MS.gene24425:intron | 35.0% | |
| CCTACTTGTCGTTAAATGTA+GGG | + | chr1.1:3895417-3895436 | None:intergenic | 35.0% | |
| CGCATAATCTGCAGTATTAT+GGG | + | chr1.1:3896895-3896914 | None:intergenic | 35.0% | |
| CTTAAATAAGCCAGTCAAAC+AGG | - | chr1.1:3895869-3895888 | MS.gene24425:intron | 35.0% | |
| CTTCAATAATAAATGCAGGC+TGG | - | chr1.1:3898617-3898636 | MS.gene24425:intron | 35.0% | |
| CTTCCGTAAATAACTCTGAT+AGG | + | chr1.1:3896423-3896442 | None:intergenic | 35.0% | |
| GAAAACTCATCAACTCAGTT+GGG | + | chr1.1:3897965-3897984 | None:intergenic | 35.0% | |
| GTTATACTGATGCAAAACTG+TGG | - | chr1.1:3898453-3898472 | MS.gene24425:intron | 35.0% | |
| TAATAAATGCAGGCTGGATT+TGG | - | chr1.1:3898623-3898642 | MS.gene24425:intron | 35.0% | |
| TATCTCTATCTTGCTTACGT+AGG | + | chr1.1:3896357-3896376 | None:intergenic | 35.0% | |
| TATGGATAAACCTGTTTGAC+TGG | + | chr1.1:3895882-3895901 | None:intergenic | 35.0% | |
| TCGCATAATCTGCAGTATTA+TGG | + | chr1.1:3896896-3896915 | None:intergenic | 35.0% | |
| TCTTGCAAAATAGCAACTGA+TGG | - | chr1.1:3896211-3896230 | MS.gene24425:intron | 35.0% | |
| TGCAAACCATAAAAAACGAG+AGG | + | chr1.1:3897330-3897349 | None:intergenic | 35.0% | |
| TGCCAAATTAAAGATAGGAG+TGG | - | chr1.1:3897725-3897744 | MS.gene24425:CDS | 35.0% | |
| TGTTAATTTCACTAACCCTC+AGG | - | chr1.1:3895042-3895061 | MS.gene24425:intron | 35.0% | |
| TTTCTGCTCTATGATTGTTG+TGG | - | chr1.1:3899156-3899175 | MS.gene24425:intron | 35.0% | |
| ! | AGGCACAATTTTCACAAATG+AGG | - | chr1.1:3898161-3898180 | MS.gene24425:intron | 35.0% |
| ! | TTTGACTTTGACTAACGTCT+TGG | - | chr1.1:3897936-3897955 | MS.gene24425:CDS | 35.0% |
| !! | AAAAAGTTGATGACAAGGAG+TGG | - | chr1.1:3896590-3896609 | MS.gene24425:intron | 35.0% |
| !! | CTTTAATCAAGTTGGACAAG+TGG | - | chr1.1:3894964-3894983 | MS.gene24425:CDS | 35.0% |
| !! | TCCTATTTGAGAGTGCTTAA+AGG | - | chr1.1:3895589-3895608 | MS.gene24425:CDS | 35.0% |
| !! | TTAGGGTTTTGGTGAAATTG+TGG | - | chr1.1:3895122-3895141 | MS.gene24425:intron | 35.0% |
| !! | TTCATATTGAGGTACTGACA+GGG | - | chr1.1:3898858-3898877 | MS.gene24425:intron | 35.0% |
| !! | TTTCATATTGAGGTACTGAC+AGG | - | chr1.1:3898857-3898876 | MS.gene24425:intron | 35.0% |
| !!! | CAGAAACCTCTCGTTTTTTA+TGG | - | chr1.1:3897321-3897340 | MS.gene24425:CDS | 35.0% |
| !!! | CTATGGTTTTGTCCAATTTG+AGG | - | chr1.1:3896252-3896271 | MS.gene24425:intron | 35.0% |
| !!! | GTTGGTTTTTATGCTGTTGT+TGG | - | chr1.1:3896114-3896133 | MS.gene24425:intron | 35.0% |
| !!! | TTTTTTAATGCTGCAGACGT+TGG | - | chr1.1:3896851-3896870 | MS.gene24425:intron | 35.0% |
| AAACTTTGTAAGAGAGGGTC+TGG | - | chr1.1:3897239-3897258 | MS.gene24425:intron | 40.0% | |
| AACGAAACTAACCATCCTGA+GGG | + | chr1.1:3895060-3895079 | None:intergenic | 40.0% | |
| AAGGTTTGAGCAGACTGTAA+AGG | - | chr1.1:3896663-3896682 | MS.gene24425:intron | 40.0% | |
| AATGACAAGCAGGTGTTTGT+GGG | - | chr1.1:3896325-3896344 | MS.gene24425:intron | 40.0% | |
| AATGCTGATCAATGACAAGC+AGG | - | chr1.1:3896315-3896334 | MS.gene24425:intron | 40.0% | |
| AATTTCACTAACCCTCAGGA+TGG | - | chr1.1:3895046-3895065 | MS.gene24425:intron | 40.0% | |
| ACCATTGGAACAAAGTAGCT+TGG | + | chr1.1:3898698-3898717 | None:intergenic | 40.0% | |
| AGACATTCTCACAGTATGCA+AGG | + | chr1.1:3897505-3897524 | None:intergenic | 40.0% | |
| AGATAGAAGAGCAAGATTGC+AGG | - | chr1.1:3897144-3897163 | MS.gene24425:CDS | 40.0% | |
| AGGAATGATGTCCTATGACA+TGG | - | chr1.1:3898981-3899000 | MS.gene24425:CDS | 40.0% | |
| AGTCGAATTTGGACCTTGAA+AGG | - | chr1.1:3897573-3897592 | MS.gene24425:CDS | 40.0% | |
| CAACAGCATAAAAACCAACC+AGG | + | chr1.1:3896113-3896132 | None:intergenic | 40.0% | |
| CCAAACTTTCCCACCAAAAT+TGG | - | chr1.1:3897540-3897559 | MS.gene24425:CDS | 40.0% | |
| CCACTGAAGAACTAGATAGT+GGG | - | chr1.1:3895950-3895969 | MS.gene24425:intron | 40.0% | |
| CCCTACATTTAACGACAAGT+AGG | - | chr1.1:3895414-3895433 | MS.gene24425:intron | 40.0% | |
| CTCTTGTATGGTTAGATGCT+TGG | - | chr1.1:3899202-3899221 | MS.gene24425:CDS | 40.0% | |
| GCCTTTAAGCACTCTCAAAT+AGG | + | chr1.1:3895593-3895612 | None:intergenic | 40.0% | |
| GGAAAACTCATCAACTCAGT+TGG | + | chr1.1:3897966-3897985 | None:intergenic | 40.0% | |
| GGAATGATGTCCTATGACAT+GGG | - | chr1.1:3898982-3899001 | MS.gene24425:CDS | 40.0% | |
| GTCTATGATATGTTTGCGGA+GGG | - | chr1.1:3898092-3898111 | MS.gene24425:CDS | 40.0% | |
| TCAAATGCAATACTTCAGGC+TGG | + | chr1.1:3899306-3899325 | None:intergenic | 40.0% | |
| TCAATTGAACTGAACCTGGT+TGG | - | chr1.1:3896096-3896115 | MS.gene24425:intron | 40.0% | |
| TCCACTGAAGAACTAGATAG+TGG | - | chr1.1:3895949-3895968 | MS.gene24425:intron | 40.0% | |
| TGGCACAATTACTTCGTACA+AGG | - | chr1.1:3896783-3896802 | MS.gene24425:intron | 40.0% | |
| TTTGTCTCCGAAATCGATAC+AGG | - | chr1.1:3895365-3895384 | MS.gene24425:intron | 40.0% | |
| TTTGTTCCAATGGTTCAGCA+GGG | - | chr1.1:3898704-3898723 | MS.gene24425:intron | 40.0% | |
| ! | ACAGAAGGTGTAATTGCAAC+AGG | + | chr1.1:3898187-3898206 | None:intergenic | 40.0% |
| ! | GTTGTTGGTTGTGCAGAATT+TGG | - | chr1.1:3896129-3896148 | MS.gene24425:intron | 40.0% |
| ! | TGGGTTCAGTTCTCATGTTT+TGG | - | chr1.1:3899132-3899151 | MS.gene24425:intron | 40.0% |
| ! | TGTTGCATTTTCAACTCCAG+AGG | - | chr1.1:3896948-3896967 | MS.gene24425:intron | 40.0% |
| ! | TGTTGTTTATTCAGCGGCTA+GGG | - | chr1.1:3895170-3895189 | MS.gene24425:CDS | 40.0% |
| ! | TTTTTGCTCAGATGCTTCCA+AGG | - | chr1.1:3898890-3898909 | MS.gene24425:intron | 40.0% |
| !! | AAAGCTGTTGAGGCATTGAA+TGG | - | chr1.1:3896565-3896584 | MS.gene24425:intron | 40.0% |
| !! | AAGGGGCACTATATAGAGTA+AGG | + | chr1.1:3898052-3898071 | None:intergenic | 40.0% |
| !! | ACATGTTTTGCTGTGTATGC+TGG | - | chr1.1:3898511-3898530 | MS.gene24425:intron | 40.0% |
| !! | AGGGGCACTATATAGAGTAA+GGG | + | chr1.1:3898051-3898070 | None:intergenic | 40.0% |
| !! | AGTGCTTAAAGGCTGATTTG+AGG | - | chr1.1:3895600-3895619 | MS.gene24425:CDS | 40.0% |
| !! | CCAATTTTGGTGGGAAAGTT+TGG | + | chr1.1:3897543-3897562 | None:intergenic | 40.0% |
| !! | CTTATTTTCCCTTGCAAGTG+AGG | - | chr1.1:3897661-3897680 | MS.gene24425:CDS | 40.0% |
| !! | GTTTTGATGAGAGATGCTGA+TGG | - | chr1.1:3896490-3896509 | MS.gene24425:intron | 40.0% |
| !! | TCAAGTTGGACAAGTGGTTT+CGG | - | chr1.1:3894970-3894989 | MS.gene24425:CDS | 40.0% |
| !! | TTGTTGTTTATTCAGCGGCT+AGG | - | chr1.1:3895169-3895188 | MS.gene24425:CDS | 40.0% |
| !! | TTTTGTCCAATTTGAGGCTG+AGG | - | chr1.1:3896258-3896277 | MS.gene24425:intron | 40.0% |
| AGATGCTGCTAAAGCTGTTG+AGG | - | chr1.1:3896555-3896574 | MS.gene24425:intron | 45.0% | |
| AGTCTCACAGTATGCAAACC+CGG | + | chr1.1:3897643-3897662 | None:intergenic | 45.0% | |
| ATCCTCTGCTGACACCATTT+GGG | + | chr1.1:3896921-3896940 | None:intergenic | 45.0% | |
| ATGATGTCCTATGACATGGG+AGG | - | chr1.1:3898985-3899004 | MS.gene24425:CDS | 45.0% | |
| CAACGAAACTAACCATCCTG+AGG | + | chr1.1:3895061-3895080 | None:intergenic | 45.0% | |
| CAATGACAAGCAGGTGTTTG+TGG | - | chr1.1:3896324-3896343 | MS.gene24425:intron | 45.0% | |
| CAGAATCCTCAGCCTCAAAT+TGG | + | chr1.1:3896267-3896286 | None:intergenic | 45.0% | |
| CAGATTATGCGAGACCCAAA+TGG | - | chr1.1:3896904-3896923 | MS.gene24425:intron | 45.0% | |
| CTTTGTTCCAATGGTTCAGC+AGG | - | chr1.1:3898703-3898722 | MS.gene24425:intron | 45.0% | |
| GACGTCGTAACGAACTGATT+CGG | + | chr1.1:3894890-3894909 | None:intergenic | 45.0% | |
| GATGACAAGGAGTGGTATGT+TGG | - | chr1.1:3896598-3896617 | MS.gene24425:intron | 45.0% | |
| GATTCAGCAGCTAAGGTTAC+CGG | - | chr1.1:3899262-3899281 | MS.gene24425:CDS | 45.0% | |
| GCTGTAGCCAAAGCATGAAT+GGG | + | chr1.1:3899042-3899061 | None:intergenic | 45.0% | |
| GGAACAAAGTAGCTTGGCAT+AGG | + | chr1.1:3898692-3898711 | None:intergenic | 45.0% | |
| GGAACATGATTCAGCAGCTA+AGG | - | chr1.1:3899255-3899274 | MS.gene24425:CDS | 45.0% | |
| GGTCTATGATATGTTTGCGG+AGG | - | chr1.1:3898091-3898110 | MS.gene24425:CDS | 45.0% | |
| GGTTAGGGTTTGTAGGGATT+TGG | - | chr1.1:3894991-3895010 | MS.gene24425:CDS | 45.0% | |
| GGTTTCGGTTAGGGTTTGTA+GGG | - | chr1.1:3894985-3895004 | MS.gene24425:CDS | 45.0% | |
| GTATGGTTAGATGCTTGGAG+AGG | - | chr1.1:3899207-3899226 | MS.gene24425:CDS | 45.0% | |
| GTTTGCGGAGGGTTATTTGT+AGG | - | chr1.1:3898103-3898122 | MS.gene24425:intron | 45.0% | |
| TAAAGTTGCTGAAGCCATGG+AGG | - | chr1.1:3899351-3899370 | MS.gene24425:CDS | 45.0% | |
| TAGCGATAAACACGTTGCCT+TGG | + | chr1.1:3898910-3898929 | None:intergenic | 45.0% | |
| TCAGGTTCAGCATCAAACTC+CGG | - | chr1.1:3894823-3894842 | MS.gene24425:CDS | 45.0% | |
| TCTGGTCAGTCTAAAGGCTA+TGG | - | chr1.1:3896235-3896254 | MS.gene24425:intron | 45.0% | |
| TGATGAGAGATGCTGATGGT+AGG | - | chr1.1:3896494-3896513 | MS.gene24425:intron | 45.0% | |
| TGCTGTAGCCAAAGCATGAA+TGG | + | chr1.1:3899043-3899062 | None:intergenic | 45.0% | |
| TGGACAAGTGGTTTCGGTTA+GGG | - | chr1.1:3894976-3894995 | MS.gene24425:CDS | 45.0% | |
| TGGTTTCGGTTAGGGTTTGT+AGG | - | chr1.1:3894984-3895003 | MS.gene24425:CDS | 45.0% | |
| TGTGCAACAGCAACATAGAG+AGG | + | chr1.1:3897115-3897134 | None:intergenic | 45.0% | |
| TGTTCCAGCTGATCTACTAG+CGG | + | chr1.1:3899241-3899260 | None:intergenic | 45.0% | |
| TTACAGTCCTCTGCTGTTCA+GGG | + | chr1.1:3899080-3899099 | None:intergenic | 45.0% | |
| TTGCAGCTTGGAGAGATGAA+TGG | - | chr1.1:3897070-3897089 | MS.gene24425:intron | 45.0% | |
| TTGGACAAGTGGTTTCGGTT+AGG | - | chr1.1:3894975-3894994 | MS.gene24425:CDS | 45.0% | |
| TTTCCCACCAAAATTGGCAC+CGG | - | chr1.1:3897546-3897565 | MS.gene24425:CDS | 45.0% | |
| TTTGAACGCCTCACTTGCAA+GGG | + | chr1.1:3897672-3897691 | None:intergenic | 45.0% | |
| ! | ATGCGATGTTACTTGCAGCT+TGG | - | chr1.1:3897058-3897077 | MS.gene24425:intron | 45.0% |
| ! | CTCCACCAATGTTTTGCACA+GGG | + | chr1.1:3898963-3898982 | None:intergenic | 45.0% |
| ! | GCCAAGCTACTTTGTTCCAA+TGG | - | chr1.1:3898694-3898713 | MS.gene24425:intron | 45.0% |
| ! | TCCACCAATGTTTTGCACAG+GGG | + | chr1.1:3898962-3898981 | None:intergenic | 45.0% |
| !! | ACTTTAGCCTTGAGAGCATC+TGG | + | chr1.1:3899337-3899356 | None:intergenic | 45.0% |
| !! | AGGCTGATTTGAGGTCTGTT+TGG | - | chr1.1:3895609-3895628 | MS.gene24425:intron | 45.0% |
| !! | CCCACTATCTAGTTCTTCAG+TGG | + | chr1.1:3895953-3895972 | None:intergenic | 45.0% |
| !! | GATGGTAGGTCGAAGTGTTT+TGG | - | chr1.1:3896508-3896527 | MS.gene24425:intron | 45.0% |
| !! | GATGGTTCTGGTCAGTCTAA+AGG | - | chr1.1:3896229-3896248 | MS.gene24425:intron | 45.0% |
| !! | GTTGTACGTTGGTGATCTTG+AGG | - | chr1.1:3894910-3894929 | MS.gene24425:CDS | 45.0% |
| AAAGCATGAATGGGCATGGG+TGG | + | chr1.1:3899033-3899052 | None:intergenic | 50.0% | |
| ACAGCTCTTGATGCTTCCTC+TGG | + | chr1.1:3896967-3896986 | None:intergenic | 50.0% | |
| ACCCATGCCCATTCATGCTT+TGG | - | chr1.1:3899032-3899051 | MS.gene24425:CDS | 50.0% | |
| ACTCGTCGTTCGCTTGGTTA+TGG | - | chr1.1:3895016-3895035 | MS.gene24425:CDS | 50.0% | |
| AGAGTCGTTGAGAGAGAGTG+AGG | + | chr1.1:3899428-3899447 | None:intergenic | 50.0% | |
| AGCCAAAGCATGAATGGGCA+TGG | + | chr1.1:3899037-3899056 | None:intergenic | 50.0% | |
| CACAGTATGCAAACCCGGTT+GGG | + | chr1.1:3897638-3897657 | None:intergenic | 50.0% | |
| CCGATTCCAGCACCTTCAAA+CGG | - | chr1.1:3894848-3894867 | MS.gene24425:CDS | 50.0% | |
| CCTGTGCAAAACATTGGTGG+AGG | - | chr1.1:3898961-3898980 | MS.gene24425:CDS | 50.0% | |
| CTTACAGTCCTCTGCTGTTC+AGG | + | chr1.1:3899081-3899100 | None:intergenic | 50.0% | |
| CTTGGAGTGTGCTCCTTTCA+AGG | + | chr1.1:3897589-3897608 | None:intergenic | 50.0% | |
| CTTTGAACGCCTCACTTGCA+AGG | + | chr1.1:3897673-3897692 | None:intergenic | 50.0% | |
| GAACGTGAGCAAGAGCTGAA+AGG | - | chr1.1:3896640-3896659 | MS.gene24425:intron | 50.0% | |
| GATCCTAGTAGTCGCAAGAG+CGG | - | chr1.1:3895258-3895277 | MS.gene24425:CDS | 50.0% | |
| GATCCTCTGCTGACACCATT+TGG | + | chr1.1:3896922-3896941 | None:intergenic | 50.0% | |
| GATGCCCCTGTGCAAAACAT+TGG | - | chr1.1:3898955-3898974 | MS.gene24425:intron | 50.0% | |
| GCCAAAGCATGAATGGGCAT+GGG | + | chr1.1:3899036-3899055 | None:intergenic | 50.0% | |
| GGCTAAAGTTGCTGAAGCCA+TGG | - | chr1.1:3899348-3899367 | MS.gene24425:CDS | 50.0% | |
| GGTGGTACAACATCACGAAG+TGG | + | chr1.1:3899015-3899034 | None:intergenic | 50.0% | |
| GTATCCGCTAGTAGATCAGC+TGG | - | chr1.1:3899234-3899253 | MS.gene24425:CDS | 50.0% | |
| GTGAGCAAGAGCTGAAAGGA+AGG | - | chr1.1:3896644-3896663 | MS.gene24425:intron | 50.0% | |
| GTTACGACGTCGTTGTACGT+TGG | - | chr1.1:3894899-3894918 | MS.gene24425:CDS | 50.0% | |
| TAAGGTTACCGGCATGCTTC+TGG | - | chr1.1:3899273-3899292 | MS.gene24425:CDS | 50.0% | |
| TACAGTCCTCTGCTGTTCAG+GGG | + | chr1.1:3899079-3899098 | None:intergenic | 50.0% | |
| TCAACAGCAAGGAAACAGCC+CGG | - | chr1.1:3899390-3899409 | MS.gene24425:CDS | 50.0% | |
| TCACAGTATGCAAACCCGGT+TGG | + | chr1.1:3897639-3897658 | None:intergenic | 50.0% | |
| TCTTGAATGTTGCTGCGACC+AGG | + | chr1.1:3898937-3898956 | None:intergenic | 50.0% | |
| TGAGTCACCAGATGCTCTCA+AGG | - | chr1.1:3899327-3899346 | MS.gene24425:CDS | 50.0% | |
| TGGCAAACCTCCCATGTCAT+AGG | + | chr1.1:3898995-3899014 | None:intergenic | 50.0% | |
| TGTCGTTGTGTCCCTCTTGT+TGG | - | chr1.1:3897471-3897490 | MS.gene24425:CDS | 50.0% | |
| TTATTCAGCGGCTAGGGCTT+TGG | - | chr1.1:3895176-3895195 | MS.gene24425:CDS | 50.0% | |
| TTCCCACCAAAATTGGCACC+GGG | - | chr1.1:3897547-3897566 | MS.gene24425:CDS | 50.0% | |
| ! | AATGGTGTCAGCAGAGGATC+TGG | - | chr1.1:3896922-3896941 | MS.gene24425:intron | 50.0% |
| ! | ATCAGCAGCAGCTTGTTCCT+GGG | - | chr1.1:3898648-3898667 | MS.gene24425:intron | 50.0% |
| ! | CCTCCACCAATGTTTTGCAC+AGG | + | chr1.1:3898964-3898983 | None:intergenic | 50.0% |
| ! | TATCAGCAGCAGCTTGTTCC+TGG | - | chr1.1:3898647-3898666 | MS.gene24425:intron | 50.0% |
| ! | TGAGGCGTTCAAAGTATGCG+AGG | - | chr1.1:3897679-3897698 | MS.gene24425:CDS | 50.0% |
| ! | TGCATCATTGGCACTTGCTG+TGG | + | chr1.1:3898782-3898801 | None:intergenic | 50.0% |
| ! | TGTTGCTGTTGCACAGCGAA+AGG | - | chr1.1:3897120-3897139 | MS.gene24425:CDS | 50.0% |
| !! | ACTTGTGGAGGCATCATAGC+TGG | + | chr1.1:3898283-3898302 | None:intergenic | 50.0% |
| !! | ATCATTGGCACTTGCTGTGG+GGG | + | chr1.1:3898779-3898798 | None:intergenic | 50.0% |
| !! | CATCATTGGCACTTGCTGTG+GGG | + | chr1.1:3898780-3898799 | None:intergenic | 50.0% |
| !! | CCGTTTGAAGGTGCTGGAAT+CGG | + | chr1.1:3894851-3894870 | None:intergenic | 50.0% |
| !! | CTTGTGGAGGCATCATAGCT+GGG | + | chr1.1:3898282-3898301 | None:intergenic | 50.0% |
| !! | GCATCATTGGCACTTGCTGT+GGG | + | chr1.1:3898781-3898800 | None:intergenic | 50.0% |
| !! | TTGTGGAGGCATCATAGCTG+GGG | + | chr1.1:3898281-3898300 | None:intergenic | 50.0% |
| ACAGTCCTCTGCTGTTCAGG+GGG | + | chr1.1:3899078-3899097 | None:intergenic | 55.0% | |
| AGGAGGGTAGAGTGGCATTC+GGG | + | chr1.1:3898215-3898234 | None:intergenic | 55.0% | |
| AGGTGCCTCCACCAACAAGA+GGG | + | chr1.1:3897485-3897504 | None:intergenic | 55.0% | |
| AGTGCCAATGATGCAGCAGC+AGG | - | chr1.1:3898787-3898806 | MS.gene24425:intron | 55.0% | |
| ATGGTTCAGCAGGGCCAACA+AGG | - | chr1.1:3898713-3898732 | MS.gene24425:intron | 55.0% | |
| CAGGAGGGTAGAGTGGCATT+CGG | + | chr1.1:3898216-3898235 | None:intergenic | 55.0% | |
| CGTGTTTATCGCTACCCTCC+TGG | - | chr1.1:3898916-3898935 | MS.gene24425:intron | 55.0% | |
| CGTTGTGTCCCTCTTGTTGG+TGG | - | chr1.1:3897474-3897493 | MS.gene24425:CDS | 55.0% | |
| CTTGTTCCTGGGATGAGACC+TGG | - | chr1.1:3898659-3898678 | MS.gene24425:intron | 55.0% | |
| GAATGTTGCTGCGACCAGGA+GGG | + | chr1.1:3898933-3898952 | None:intergenic | 55.0% | |
| GCCCCTGTGCAAAACATTGG+TGG | - | chr1.1:3898958-3898977 | MS.gene24425:intron | 55.0% | |
| GGTCCAAATTCGACTCTCCC+CGG | + | chr1.1:3897568-3897587 | None:intergenic | 55.0% | |
| GTTGTTGACCAGGACCTCCT+CGG | + | chr1.1:3898757-3898776 | None:intergenic | 55.0% | |
| TCCCACCAAAATTGGCACCG+GGG | - | chr1.1:3897548-3897567 | MS.gene24425:CDS | 55.0% | |
| TGAATGTTGCTGCGACCAGG+AGG | + | chr1.1:3898934-3898953 | None:intergenic | 55.0% | |
| TGTTGGCCCTGCTGAACCAT+TGG | + | chr1.1:3898713-3898732 | None:intergenic | 55.0% | |
| TTGGCTACTCGTCGTTCGCT+TGG | - | chr1.1:3895010-3895029 | MS.gene24425:CDS | 55.0% | |
| ! | AAGGTGCCTCCACCAACAAG+AGG | + | chr1.1:3897486-3897505 | None:intergenic | 55.0% |
| ! | AGTGAGGCTAGTTGATCCGC+CGG | + | chr1.1:3899412-3899431 | None:intergenic | 55.0% |
| ! | GAAACGACGCTGCCGTTTGA+AGG | + | chr1.1:3894863-3894882 | None:intergenic | 55.0% |
| ! | GACCCAAATGGTGTCAGCAG+AGG | - | chr1.1:3896916-3896935 | MS.gene24425:intron | 55.0% |
| ! | GTCCATCTCCAGAAGCATGC+CGG | + | chr1.1:3899284-3899303 | None:intergenic | 55.0% |
| ! | TACCGGCATGCTTCTGGAGA+TGG | - | chr1.1:3899279-3899298 | MS.gene24425:CDS | 55.0% |
| ! | TGTGTCCCTCTTGTTGGTGG+AGG | - | chr1.1:3897477-3897496 | MS.gene24425:CDS | 55.0% |
| !! | ACTCTCCCCGGTGCCAATTT+TGG | + | chr1.1:3897556-3897575 | None:intergenic | 55.0% |
| !! | CAAGACCAGGAGTACCAGGA+GGG | + | chr1.1:3898231-3898250 | None:intergenic | 55.0% |
| !! | TCCCCGGTGCCAATTTTGGT+GGG | + | chr1.1:3897552-3897571 | None:intergenic | 55.0% |
| !! | TGTCCAAGACCAGGAGTACC+AGG | + | chr1.1:3898235-3898254 | None:intergenic | 55.0% |
| !! | TGTGGAGGCATCATAGCTGG+GGG | + | chr1.1:3898280-3898299 | None:intergenic | 55.0% |
| ACAGCAAGGAAACAGCCCGG+CGG | - | chr1.1:3899393-3899412 | MS.gene24425:CDS | 60.0% | |
| ATGCTCCCCCTGAACAGCAG+AGG | - | chr1.1:3899070-3899089 | MS.gene24425:intron | 60.0% | |
| CCTCCTGGTACTCCTGGTCT+TGG | - | chr1.1:3898229-3898248 | MS.gene24425:intron | 60.0% | |
| CGAATGCCACTCTACCCTCC+TGG | - | chr1.1:3898214-3898233 | MS.gene24425:intron | 60.0% | |
| CTCTACCCTCCTGGTACTCC+TGG | - | chr1.1:3898223-3898242 | MS.gene24425:intron | 60.0% | |
| CTTGGCATAGGACCACCACC+AGG | + | chr1.1:3898680-3898699 | None:intergenic | 60.0% | |
| GCACCGGGGAGAGTCGAATT+TGG | - | chr1.1:3897562-3897581 | MS.gene24425:CDS | 60.0% | |
| GCATCATAGCTGGGGGTCCT+TGG | + | chr1.1:3898273-3898292 | None:intergenic | 60.0% | |
| GGAGGGTAGAGTGGCATTCG+GGG | + | chr1.1:3898214-3898233 | None:intergenic | 60.0% | |
| GTTCCTGGGATGAGACCTGG+TGG | - | chr1.1:3898662-3898681 | MS.gene24425:intron | 60.0% | |
| TGCTGTGGGGGTTGTTGACC+AGG | + | chr1.1:3898767-3898786 | None:intergenic | 60.0% | |
| ! | ACGCTGCCGTTTGAAGGTGC+TGG | + | chr1.1:3894857-3894876 | None:intergenic | 60.0% |
| ! | GGAGTACCAGGAGGGTAGAG+TGG | + | chr1.1:3898223-3898242 | None:intergenic | 60.0% |
| ! | GTGAGGCTAGTTGATCCGCC+GGG | + | chr1.1:3899411-3899430 | None:intergenic | 60.0% |
| ! | GTGCCGCTCTTGCGACTACT+AGG | + | chr1.1:3895264-3895283 | None:intergenic | 60.0% |
| ! | TTGGGTTCGCCTGGAGGTGT+TGG | + | chr1.1:3897620-3897639 | None:intergenic | 60.0% |
| !! | CCAAGACCAGGAGTACCAGG+AGG | + | chr1.1:3898232-3898251 | None:intergenic | 60.0% |
| !! | CTCCCCGGTGCCAATTTTGG+TGG | + | chr1.1:3897553-3897572 | None:intergenic | 60.0% |
| !! | GAAGGTGCTGGAATCGGTGC+CGG | + | chr1.1:3894845-3894864 | None:intergenic | 60.0% |
| !! | GAGGTGTTGGCTTGGGAGCT+TGG | + | chr1.1:3897607-3897626 | None:intergenic | 60.0% |
| !! | TCGCCTGGAGGTGTTGGCTT+GGG | + | chr1.1:3897614-3897633 | None:intergenic | 60.0% |
| !! | TTCGCCTGGAGGTGTTGGCT+TGG | + | chr1.1:3897615-3897634 | None:intergenic | 60.0% |
| ACCTCCAGGCGAACCCAACC+GGG | - | chr1.1:3897622-3897641 | MS.gene24425:CDS | 65.0% | |
| CAAACCCGGTTGGGTTCGCC+TGG | + | chr1.1:3897629-3897648 | None:intergenic | 65.0% | |
| CAACAAGGTCAGCGCCCTGG+TGG | - | chr1.1:3898728-3898747 | MS.gene24425:intron | 65.0% | |
| CACCTCCAGGCGAACCCAAC+CGG | - | chr1.1:3897621-3897640 | MS.gene24425:CDS | 65.0% | |
| CCACCACCAGGTCTCATCCC+AGG | + | chr1.1:3898668-3898687 | None:intergenic | 65.0% | |
| CCTGGGATGAGACCTGGTGG+TGG | - | chr1.1:3898665-3898684 | MS.gene24425:intron | 65.0% | |
| GCTCCCAAGCCAACACCTCC+AGG | - | chr1.1:3897608-3897627 | MS.gene24425:CDS | 65.0% | |
| GGCATTCGGGGCGCAACAGA+AGG | + | chr1.1:3898202-3898221 | None:intergenic | 65.0% | |
| !! | CACCAGGGCGCTGACCTTGT+TGG | + | chr1.1:3898730-3898749 | None:intergenic | 65.0% |
| ACCCGGTTGGGTTCGCCTGG+AGG | + | chr1.1:3897626-3897645 | None:intergenic | 70.0% | |
| GACCTCCTCGGCGTCCACCA+GGG | + | chr1.1:3898745-3898764 | None:intergenic | 70.0% | |
| GGCCAACAAGGTCAGCGCCC+TGG | - | chr1.1:3898725-3898744 | MS.gene24425:intron | 70.0% | |
| GGACCTCCTCGGCGTCCACC+AGG | + | chr1.1:3898746-3898765 | None:intergenic | 75.0% | |
| GGTGGACGCCGAGGAGGTCC+TGG | - | chr1.1:3898746-3898765 | MS.gene24425:intron | 75.0% | |
| !! | CAGCGCCCTGGTGGACGCCG+AGG | - | chr1.1:3898737-3898756 | MS.gene24425:intron | 80.0% |
| !! | CGCCCTGGTGGACGCCGAGG+AGG | - | chr1.1:3898740-3898759 | MS.gene24425:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 3894812 | 3899450 | 3894812 | ID=MS.gene24425 |
| chr1.1 | mRNA | 3894812 | 3899450 | 3894812 | ID=MS.gene24425.t1;Parent=MS.gene24425 |
| chr1.1 | exon | 3899195 | 3899450 | 3899195 | ID=MS.gene24425.t1.exon1;Parent=MS.gene24425.t1 |
| chr1.1 | CDS | 3899195 | 3899450 | 3899195 | ID=cds.MS.gene24425.t1;Parent=MS.gene24425.t1 |
| chr1.1 | exon | 3898960 | 3899078 | 3898960 | ID=MS.gene24425.t1.exon2;Parent=MS.gene24425.t1 |
| chr1.1 | CDS | 3898960 | 3899078 | 3898960 | ID=cds.MS.gene24425.t1;Parent=MS.gene24425.t1 |
| chr1.1 | exon | 3897458 | 3898117 | 3897458 | ID=MS.gene24425.t1.exon3;Parent=MS.gene24425.t1 |
| chr1.1 | CDS | 3897458 | 3898117 | 3897458 | ID=cds.MS.gene24425.t1;Parent=MS.gene24425.t1 |
| chr1.1 | exon | 3897278 | 3897355 | 3897278 | ID=MS.gene24425.t1.exon4;Parent=MS.gene24425.t1 |
| chr1.1 | CDS | 3897278 | 3897355 | 3897278 | ID=cds.MS.gene24425.t1;Parent=MS.gene24425.t1 |
| chr1.1 | exon | 3897097 | 3897186 | 3897097 | ID=MS.gene24425.t1.exon5;Parent=MS.gene24425.t1 |
| chr1.1 | CDS | 3897097 | 3897186 | 3897097 | ID=cds.MS.gene24425.t1;Parent=MS.gene24425.t1 |
| chr1.1 | exon | 3895962 | 3896099 | 3895962 | ID=MS.gene24425.t1.exon6;Parent=MS.gene24425.t1 |
| chr1.1 | CDS | 3895962 | 3896099 | 3895962 | ID=cds.MS.gene24425.t1;Parent=MS.gene24425.t1 |
| chr1.1 | exon | 3895454 | 3895627 | 3895454 | ID=MS.gene24425.t1.exon7;Parent=MS.gene24425.t1 |
| chr1.1 | CDS | 3895454 | 3895627 | 3895454 | ID=cds.MS.gene24425.t1;Parent=MS.gene24425.t1 |
| chr1.1 | exon | 3895167 | 3895361 | 3895167 | ID=MS.gene24425.t1.exon8;Parent=MS.gene24425.t1 |
| chr1.1 | CDS | 3895167 | 3895361 | 3895167 | ID=cds.MS.gene24425.t1;Parent=MS.gene24425.t1 |
| chr1.1 | exon | 3894812 | 3895045 | 3894812 | ID=MS.gene24425.t1.exon9;Parent=MS.gene24425.t1 |
| chr1.1 | CDS | 3894812 | 3895045 | 3894812 | ID=cds.MS.gene24425.t1;Parent=MS.gene24425.t1 |
| Gene Sequence |
| Protein sequence |
