AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25177

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25177.t1 MTR_1g032490 84.937 478 22 3 1 428 1 478 0.0 778
MS.gene25177.t1 MTR_1g107315 77.612 469 58 1 1 422 1 469 0.0 712
MS.gene25177.t1 MTR_3g049970 75.319 470 68 2 1 422 1 470 0.0 702
MS.gene25177.t1 MTR_1g107350 74.627 469 72 1 1 422 1 469 0.0 700
MS.gene25177.t1 MTR_8g064870 66.808 473 104 4 3 424 6 476 0.0 619
MS.gene25177.t1 MTR_8g064880 67.155 478 103 4 1 424 1 478 0.0 606
MS.gene25177.t1 MTR_1g107360 62.017 466 122 2 3 421 4 461 0.0 562
MS.gene25177.t1 MTR_1g107285 61.864 472 122 6 1 422 1 464 0.0 559
MS.gene25177.t1 MTR_1g107365 62.340 470 110 7 3 422 40 492 0.0 559
MS.gene25177.t1 MTR_1g107375 61.864 472 112 8 1 422 1 454 0.0 540
MS.gene25177.t1 MTR_1g107325 56.776 428 112 8 1 426 1 357 2.84e-155 443
MS.gene25177.t1 MTR_1g107340 65.600 250 85 1 1 249 1 250 1.43e-109 323
MS.gene25177.t1 MTR_1g107380 35.062 482 243 12 4 427 9 478 3.86e-77 248
MS.gene25177.t1 MTR_5g004940 33.023 430 215 7 8 427 17 383 1.77e-70 228
MS.gene25177.t1 MTR_4g095008 33.053 475 250 14 4 424 7 467 2.20e-68 226
MS.gene25177.t1 MTR_6g038240 30.870 460 258 10 10 424 13 457 1.62e-63 211
MS.gene25177.t1 MTR_6g038200 29.783 460 251 9 10 418 13 451 2.37e-63 211
MS.gene25177.t1 MTR_6g038230 31.317 463 240 12 10 418 13 451 6.97e-63 210
MS.gene25177.t1 MTR_3g084520 31.866 477 248 12 10 421 8 472 8.40e-63 210
MS.gene25177.t1 MTR_5g035580 32.174 460 245 12 7 419 12 451 1.66e-62 209
MS.gene25177.t1 MTR_8g088560 30.886 463 260 11 7 422 9 458 2.55e-62 208
MS.gene25177.t1 MTR_6g038220 30.886 463 241 12 10 418 13 450 9.73e-62 207
MS.gene25177.t1 MTR_7g080950 32.035 462 248 12 7 421 5 447 1.53e-61 206
MS.gene25177.t1 MTR_8g083290 30.913 482 247 15 6 421 2 463 1.86e-60 204
MS.gene25177.t1 MTR_5g035560 30.687 466 248 10 7 421 10 451 2.72e-60 204
MS.gene25177.t1 MTR_6g038300 29.501 461 266 9 8 423 11 457 1.62e-59 201
MS.gene25177.t1 MTR_4g094920 32.842 475 251 12 4 424 22 482 2.26e-59 202
MS.gene25177.t1 MTR_7g080940 29.828 466 253 10 7 421 10 452 8.89e-59 199
MS.gene25177.t1 MTR_8g083280 30.064 469 259 12 8 421 7 461 9.01e-59 199
MS.gene25177.t1 MTR_7g080935 30.917 469 244 11 7 421 10 452 8.62e-58 196
MS.gene25177.t1 MTR_3g084530 31.405 484 241 15 10 421 8 472 8.69e-58 197
MS.gene25177.t1 MTR_3g084540 31.315 479 249 13 10 421 8 473 9.02e-58 197
MS.gene25177.t1 MTR_5g016480 30.189 477 270 11 1 421 1 470 2.13e-57 196
MS.gene25177.t1 MTR_7g080900 28.358 469 266 12 3 421 7 455 8.36e-50 175
MS.gene25177.t1 MTR_2g008210 28.337 487 266 16 2 421 6 476 5.76e-48 171
MS.gene25177.t1 MTR_5g464810 28.571 490 266 16 3 424 7 480 2.91e-47 169
MS.gene25177.t1 MTR_5g064240 28.571 490 266 16 3 424 7 480 2.91e-47 169
MS.gene25177.t1 MTR_3g479490 25.979 485 273 14 7 421 5 473 3.25e-42 155
MS.gene25177.t1 MTR_3g079480 25.410 488 282 14 2 421 15 488 5.48e-41 152
MS.gene25177.t1 MTR_6g014250 25.620 484 276 14 10 424 12 480 7.40e-41 152
MS.gene25177.t1 MTR_5g464760 28.074 488 257 19 8 421 12 479 3.72e-40 150
MS.gene25177.t1 MTR_6g013450 25.773 485 277 12 10 424 12 483 5.52e-40 149
MS.gene25177.t1 MTR_6g014290 26.283 487 273 15 8 424 10 480 7.43e-40 149
MS.gene25177.t1 MTR_0036s0220 26.380 489 262 16 8 421 12 477 1.18e-39 148
MS.gene25177.t1 MTR_7g080960 26.747 501 248 17 3 421 7 470 1.29e-39 148
MS.gene25177.t1 MTR_7g011470 27.754 472 269 13 10 424 12 468 1.88e-39 147
MS.gene25177.t1 MTR_6g013440 25.413 484 279 13 10 424 13 483 1.14e-38 145
MS.gene25177.t1 MTR_4g094220 26.283 487 277 16 8 424 7 481 2.89e-38 144
MS.gene25177.t1 MTR_3g008010 24.694 490 287 12 3 424 5 480 3.06e-38 144
MS.gene25177.t1 MTR_6g014220 25.979 485 273 15 10 424 12 480 3.19e-38 144
MS.gene25177.t1 MTR_6g014040 24.699 498 281 15 2 424 5 483 3.50e-38 144
MS.gene25177.t1 MTR_7g011470 27.311 476 262 15 10 424 12 464 6.55e-38 143
MS.gene25177.t1 MTR_0288s0020 24.385 488 264 13 8 424 10 463 1.90e-37 142
MS.gene25177.t1 MTR_3g479520 24.116 481 281 14 10 421 17 482 5.52e-37 141
MS.gene25177.t1 MTR_6g014270 26.721 494 262 17 10 424 9 481 4.03e-36 139
MS.gene25177.t1 MTR_6g014050 26.955 486 269 15 10 424 13 483 4.28e-36 139
MS.gene25177.t1 MTR_6g014310 25.311 482 282 14 10 424 13 483 4.36e-36 139
MS.gene25177.t1 MTR_6g013960 24.897 486 279 13 10 424 12 482 8.23e-36 138
MS.gene25177.t1 MTR_6g014020 25.519 482 281 15 10 424 12 482 1.29e-35 137
MS.gene25177.t1 MTR_6g014186 27.115 461 279 17 1 424 1 441 1.27e-34 134
MS.gene25177.t1 MTR_6g011340 26.994 489 265 16 10 424 12 482 6.54e-33 129
MS.gene25177.t1 MTR_4g485630 24.330 485 284 12 7 424 8 476 8.61e-33 129
MS.gene25177.t1 MTR_6g013920 25.255 491 288 13 3 426 5 483 3.13e-32 128
MS.gene25177.t1 MTR_6g014187 23.859 482 289 12 10 424 12 482 3.36e-32 127
MS.gene25177.t1 MTR_5g058320 24.375 480 274 12 10 424 12 467 6.25e-32 127
MS.gene25177.t1 MTR_6g013900 25.358 489 286 13 3 424 5 481 7.24e-31 124
MS.gene25177.t1 MTR_6g013680 26.098 387 242 14 64 424 9 377 8.24e-31 122
MS.gene25177.t1 MTR_8g059425 24.845 483 281 14 10 424 12 480 2.65e-30 122
MS.gene25177.t1 MTR_6g014200 26.694 487 269 14 10 424 9 479 2.72e-30 122
MS.gene25177.t1 MTR_7g013200 26.724 464 255 17 8 418 5 436 2.96e-30 121
MS.gene25177.t1 MTR_6g014300 24.131 489 263 16 10 424 14 468 3.05e-29 119
MS.gene25177.t1 MTR_3g069710 24.301 465 276 11 8 421 12 451 3.80e-29 119
MS.gene25177.t1 MTR_6g014150 26.104 498 275 18 1 424 1 479 7.11e-28 115
MS.gene25177.t1 MTR_6g013990 25.813 492 265 16 10 424 12 480 1.46e-27 114
MS.gene25177.t1 MTR_3g069690 25.532 470 266 15 8 421 8 449 1.92e-27 114
MS.gene25177.t1 MTR_5g031830 25.314 478 284 13 4 422 8 471 2.72e-27 114
MS.gene25177.t1 MTR_4g064987 25.364 481 261 17 1 421 1 443 3.32e-27 113
MS.gene25177.t1 MTR_5g031860 25.895 475 276 15 8 422 12 470 3.43e-27 113
MS.gene25177.t1 MTR_7g013180 25.322 466 264 17 8 418 5 441 4.26e-27 112
MS.gene25177.t1 MTR_4g064987 25.420 476 259 17 8 421 8 449 4.61e-27 112
MS.gene25177.t1 MTR_8g066610 24.230 487 284 15 6 422 7 478 3.49e-26 110
MS.gene25177.t1 MTR_3g479470 23.958 480 284 16 8 420 13 478 6.00e-26 110
MS.gene25177.t1 MTR_7g013220 25.482 467 268 19 8 418 5 447 9.08e-26 108
MS.gene25177.t1 MTR_5g045970 23.171 492 295 13 3 421 11 492 2.37e-25 108
MS.gene25177.t1 MTR_5g031840 24.375 480 283 16 4 422 2 462 3.34e-25 107
MS.gene25177.t1 MTR_7g071040 24.033 491 291 20 3 422 12 491 7.83e-25 107
MS.gene25177.t1 MTR_7g070610 23.185 496 281 19 7 422 12 487 1.80e-24 105
MS.gene25177.t1 MTR_5g072860 22.796 465 289 17 9 421 19 465 2.64e-24 105
MS.gene25177.t1 MTR_7g070860 24.307 469 291 16 7 422 6 463 6.42e-24 103
MS.gene25177.t1 MTR_7g070800 23.673 490 288 18 4 422 2 476 8.74e-24 103
MS.gene25177.t1 MTR_4g117980 24.400 500 273 19 4 422 7 482 1.50e-23 103
MS.gene25177.t1 MTR_7g070660 24.242 495 280 19 3 422 6 480 5.36e-23 101
MS.gene25177.t1 MTR_1g040310 23.517 489 301 14 4 428 11 490 6.58e-23 101
MS.gene25177.t1 MTR_5g040030 21.907 493 291 17 7 422 13 488 8.74e-23 100
MS.gene25177.t1 MTR_7g070780 22.754 501 284 15 3 422 6 484 9.98e-23 100
MS.gene25177.t1 MTR_7g070740 23.232 495 289 17 3 422 6 484 2.48e-22 99.4
MS.gene25177.t1 MTR_3g479610 22.867 293 168 5 180 421 27 312 3.02e-22 97.1
MS.gene25177.t1 MTR_6g014190 26.190 294 160 7 180 424 4 289 3.21e-22 96.7
MS.gene25177.t1 MTR_8g012650 25.798 376 197 13 115 421 109 471 3.99e-22 98.6
MS.gene25177.t1 MTR_7g117405 25.104 482 270 17 14 421 16 480 4.90e-22 98.6
MS.gene25177.t1 MTR_6g013435 25.879 313 203 8 131 424 7 309 5.30e-22 96.3
MS.gene25177.t1 MTR_5g039900 21.907 493 288 18 7 422 12 484 7.12e-22 98.2
MS.gene25177.t1 MTR_5g072840 25.732 478 250 17 9 421 11 448 8.01e-22 97.4
MS.gene25177.t1 MTR_7g070940 23.969 509 251 20 7 422 8 473 1.23e-21 97.4
MS.gene25177.t1 MTR_7g070910 23.092 498 287 18 3 422 6 485 1.64e-21 97.1
MS.gene25177.t1 MTR_0891s0010 22.184 293 170 5 180 421 4 289 1.65e-21 94.4
MS.gene25177.t1 MTR_4g117950 23.859 482 280 16 6 422 4 463 2.21e-21 96.7
MS.gene25177.t1 MTR_2g059240 24.580 476 277 15 8 421 13 468 3.80e-21 95.9
MS.gene25177.t1 MTR_4g485620 23.617 470 271 18 22 421 3 454 4.78e-21 95.5
MS.gene25177.t1 MTR_1g062380 23.422 491 288 17 7 421 15 493 4.87e-21 95.5
MS.gene25177.t1 MTR_7g102490 23.576 509 284 17 1 424 1 489 5.45e-21 95.5
MS.gene25177.t1 MTR_6g035295 22.360 483 300 16 7 422 11 485 9.78e-21 94.7
MS.gene25177.t1 MTR_7g070810 23.387 496 273 18 7 422 8 476 1.07e-20 94.4
MS.gene25177.t1 MTR_7g102550 24.341 493 291 15 1 420 1 484 1.10e-20 94.4
MS.gene25177.t1 MTR_6g014240 23.457 486 270 14 3 424 2 449 1.72e-20 93.6
MS.gene25177.t1 MTR_7g055710 23.299 485 285 18 3 414 6 476 2.59e-20 93.6
MS.gene25177.t1 MTR_7g070930 22.020 495 296 19 3 422 9 488 2.91e-20 93.2
MS.gene25177.t1 MTR_5g016660 21.605 486 309 13 3 422 5 484 2.98e-20 93.2
MS.gene25177.t1 MTR_8g074550 27.586 319 206 10 6 315 6 308 9.30e-20 91.7
MS.gene25177.t1 MTR_5g075440 23.555 467 283 15 8 421 10 455 9.97e-20 91.3
MS.gene25177.t1 MTR_8g012745 24.734 376 200 14 115 422 109 469 1.05e-19 91.7
MS.gene25177.t1 MTR_3g031450 23.542 463 276 15 8 421 18 451 1.06e-19 91.3
MS.gene25177.t1 MTR_8g012635 23.720 371 203 10 115 417 109 467 1.26e-19 91.3
MS.gene25177.t1 MTR_8g044140 25.393 382 200 14 119 428 87 455 1.59e-19 90.9
MS.gene25177.t1 MTR_0536s0020 24.547 497 273 19 2 423 12 481 4.19e-19 89.7
MS.gene25177.t1 MTR_2g034990 23.000 500 276 20 6 422 9 482 5.75e-19 89.4
MS.gene25177.t1 MTR_2g035020 22.474 485 297 15 6 422 9 482 6.04e-19 89.4
MS.gene25177.t1 MTR_5g072810 23.701 481 261 17 8 421 12 453 7.24e-19 89.0
MS.gene25177.t1 MTR_2g098430 25.205 488 269 22 9 418 7 476 9.59e-19 88.6
MS.gene25177.t1 MTR_4g128720 22.833 473 272 13 7 419 14 453 9.63e-19 88.6
MS.gene25177.t1 MTR_5g090670 26.462 359 211 16 9 337 6 341 1.02e-18 88.6
MS.gene25177.t1 MTR_5g098930 26.087 368 213 14 7 342 4 344 2.25e-18 87.4
MS.gene25177.t1 MTR_4g108250 22.020 495 299 18 3 422 6 488 2.63e-18 87.4
MS.gene25177.t1 MTR_2g035040 24.339 378 199 14 118 422 24 387 3.49e-18 86.3
MS.gene25177.t1 MTR_4g485590 27.635 351 191 16 1 332 1 307 6.17e-18 85.5
MS.gene25177.t1 MTR_3g031400 24.017 458 278 15 8 421 18 449 8.44e-18 85.9
MS.gene25177.t1 MTR_6g035185 22.951 488 292 15 6 422 9 483 1.08e-17 85.5
MS.gene25177.t1 MTR_7g012120 23.469 490 283 17 6 422 14 484 1.33e-17 85.1
MS.gene25177.t1 MTR_5g067170 22.793 487 291 15 6 422 9 480 1.77e-17 84.7
MS.gene25177.t1 MTR_5g045960 21.730 497 288 17 7 421 8 485 1.86e-17 84.7
MS.gene25177.t1 MTR_4g117890 22.424 495 284 15 2 422 7 475 2.30e-17 84.3
MS.gene25177.t1 MTR_4g485640 22.863 468 271 15 10 410 211 655 3.75e-17 84.3
MS.gene25177.t1 MTR_8g027885 23.222 478 276 13 6 417 16 468 5.81e-17 83.2
MS.gene25177.t1 MTR_7g102450 23.218 491 266 17 10 421 13 471 6.43e-17 83.2
MS.gene25177.t1 MTR_5g090700 26.404 356 217 14 8 337 5 341 9.23e-17 82.4
MS.gene25177.t1 MTR_5g090660 24.251 367 224 11 8 342 5 349 1.11e-16 82.4
MS.gene25177.t1 MTR_0184s0040 26.786 280 130 9 201 417 209 476 1.20e-16 82.4
MS.gene25177.t1 MTR_0078s0190 26.786 280 130 9 201 417 209 476 1.20e-16 82.4
MS.gene25177.t1 MTR_2g008225 25.464 377 207 12 3 342 10 349 1.75e-16 81.6
MS.gene25177.t1 MTR_5g090610 25.575 348 212 12 9 337 6 325 1.89e-16 81.6
MS.gene25177.t1 MTR_0009s0240 21.414 495 277 15 3 422 2 459 2.42e-16 81.3
MS.gene25177.t1 MTR_2g046620 27.394 376 198 16 2 342 10 345 2.72e-16 80.9
MS.gene25177.t1 MTR_5g070040 25.849 383 204 15 90 410 91 455 3.27e-16 80.9
MS.gene25177.t1 MTR_8g083300 33.333 147 82 4 8 150 7 141 3.52e-16 76.3
MS.gene25177.t1 MTR_4g082810 24.566 346 208 11 7 325 6 325 3.92e-16 80.1
MS.gene25177.t1 MTR_5g090620 25.212 353 220 13 9 336 6 339 3.96e-16 80.5
MS.gene25177.t1 MTR_0184s0030 23.656 372 206 12 110 417 106 463 3.96e-16 80.5
MS.gene25177.t1 MTR_2g008220 24.863 366 223 11 3 342 9 348 4.01e-16 80.5
MS.gene25177.t1 MTR_7g070870 25.074 339 198 13 18 335 29 332 6.43e-16 80.1
MS.gene25177.t1 MTR_4g128690 22.833 473 281 16 1 419 8 450 6.48e-16 79.7
MS.gene25177.t1 MTR_8g027870 22.951 488 265 14 6 417 16 468 9.75e-16 79.3
MS.gene25177.t1 MTR_8g006710 24.876 402 221 13 89 422 78 466 1.01e-15 79.3
MS.gene25177.t1 MTR_8g071070 22.222 495 283 16 3 422 2 469 1.05e-15 79.3
MS.gene25177.t1 MTR_5g090580 25.978 358 212 15 8 336 5 338 1.05e-15 79.3
MS.gene25177.t1 MTR_8g465670 27.688 372 200 18 9 342 8 348 1.05e-15 79.3
MS.gene25177.t1 MTR_5g029800 23.589 496 274 17 6 422 9 478 1.46e-15 79.0
MS.gene25177.t1 MTR_8g006730 24.682 393 215 14 93 417 83 462 2.59e-15 78.2
MS.gene25177.t1 MTR_8g032950 23.274 507 274 17 1 422 5 481 2.91e-15 78.2
MS.gene25177.t1 MTR_7g046490 25.352 355 186 11 128 418 121 460 3.72e-15 77.4
MS.gene25177.t1 MTR_7g102460 22.068 503 297 18 1 424 1 487 1.11e-14 76.3
MS.gene25177.t1 MTR_8g077590 23.243 370 209 10 110 417 106 462 1.24e-14 75.9
MS.gene25177.t1 MTR_4g123553 26.596 376 212 15 2 349 9 348 1.64e-14 75.5
MS.gene25177.t1 MTR_5g090630 26.211 351 209 12 9 336 6 329 1.75e-14 75.5
MS.gene25177.t1 MTR_7g047030 25.000 360 228 12 8 342 6 348 1.94e-14 75.5
MS.gene25177.t1 MTR_7g047270 25.000 360 228 12 8 342 6 348 1.94e-14 75.5
MS.gene25177.t1 MTR_8g006220 26.203 374 211 14 9 342 7 355 2.46e-14 75.1
MS.gene25177.t1 MTR_8g009067 24.147 381 189 14 117 418 102 461 6.78e-14 73.6
MS.gene25177.t1 MTR_5g019580 20.641 499 294 17 7 425 6 482 9.83e-14 73.2
MS.gene25177.t1 MTR_5g087620 23.246 499 283 21 8 421 10 493 2.94e-13 71.6
MS.gene25177.t1 MTR_5g090600 22.316 475 280 17 9 421 6 453 3.91e-13 71.2
MS.gene25177.t1 MTR_0078s0010 27.820 266 158 10 100 342 94 348 4.01e-13 71.2
MS.gene25177.t1 MTR_8g009067 24.167 360 181 13 130 418 5 343 4.65e-13 70.5
MS.gene25177.t1 MTR_2g040530 26.346 353 212 13 5 333 2 330 7.32e-13 70.5
MS.gene25177.t1 MTR_8g068360 26.437 348 216 11 7 336 11 336 1.03e-12 70.1
MS.gene25177.t1 MTR_8g009073 21.971 487 273 15 7 417 5 460 1.14e-12 69.7
MS.gene25177.t1 MTR_5g090650 23.796 353 195 12 7 336 4 305 1.29e-12 68.9
MS.gene25177.t1 MTR_0078s0060 24.739 287 139 11 201 423 194 467 1.55e-12 69.3
MS.gene25177.t1 MTR_6g033725 24.096 332 180 12 137 410 133 450 1.70e-12 69.3
MS.gene25177.t1 MTR_4g082820 25.974 308 151 11 177 422 172 464 2.13e-12 68.9
MS.gene25177.t1 MTR_6g488280 23.664 393 212 15 93 415 84 458 2.39e-12 68.9
MS.gene25177.t1 MTR_0428s0010 23.664 393 212 15 93 415 84 458 2.39e-12 68.9
MS.gene25177.t1 MTR_6g033625 21.712 479 286 13 9 419 5 462 2.47e-12 68.9
MS.gene25177.t1 MTR_2g046750 25.344 363 210 15 5 336 2 334 2.70e-12 68.6
MS.gene25177.t1 MTR_7g070760 29.255 188 104 7 206 367 24 208 2.71e-12 66.2
MS.gene25177.t1 MTR_6g023665 22.500 480 275 17 9 417 14 467 3.83e-12 68.2
MS.gene25177.t1 MTR_7g102520 21.926 488 298 19 7 421 11 488 7.52e-12 67.4
MS.gene25177.t1 MTR_4g077960 26.596 376 169 20 18 342 2 321 7.87e-12 67.0
MS.gene25177.t1 MTR_0078s0200 26.636 214 139 7 110 317 106 307 9.99e-12 65.9
MS.gene25177.t1 MTR_1g090270 21.366 454 270 13 7 398 14 442 1.18e-11 66.6
MS.gene25177.t1 MTR_6g042310 27.778 360 187 18 7 336 17 333 1.37e-11 66.6
MS.gene25177.t1 MTR_8g006260 25.275 273 157 12 100 342 97 352 1.67e-11 66.2
MS.gene25177.t1 MTR_5g090690 27.306 271 149 13 82 337 32 269 2.30e-11 65.5
MS.gene25177.t1 MTR_5g072850 27.869 244 145 7 201 421 146 381 3.45e-11 65.1
MS.gene25177.t1 MTR_0199s0010 25.417 240 148 11 10 228 12 241 3.52e-11 63.9
MS.gene25177.t1 MTR_2g046820 25.143 350 224 12 5 336 2 331 3.83e-11 65.1
MS.gene25177.t1 MTR_3g479620 28.750 160 102 6 8 162 6 158 4.30e-11 62.0
MS.gene25177.t1 MTR_6g014185 27.468 233 128 9 215 421 127 344 7.07e-11 63.9
MS.gene25177.t1 MTR_7g470610 26.667 195 118 10 126 315 4 178 7.53e-11 63.2
MS.gene25177.t1 MTR_7g070583 26.667 195 118 10 126 315 4 178 7.53e-11 63.2
MS.gene25177.t1 MTR_6g033660 24.436 266 131 7 201 410 201 452 8.67e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25177.t1 AT4G15480 46.368 468 199 5 3 421 14 478 3.93e-146 425
MS.gene25177.t1 AT3G21560 43.368 475 208 9 6 426 10 477 1.40e-127 378
MS.gene25177.t1 AT4G15500 44.609 473 197 12 1 421 3 462 4.72e-127 376
MS.gene25177.t1 AT4G15490 42.469 478 220 10 1 428 1 473 2.45e-123 367
MS.gene25177.t1 AT2G23260 32.842 475 247 18 1 423 1 455 2.81e-61 206
MS.gene25177.t1 AT1G05680 28.817 465 256 12 8 418 6 449 4.38e-58 197
MS.gene25177.t1 AT2G23250 32.823 457 243 15 11 423 1 437 7.50e-58 196
MS.gene25177.t1 AT2G43820 28.571 476 248 13 8 424 7 449 1.26e-55 191
MS.gene25177.t1 AT1G05675 28.913 460 260 12 9 418 7 449 1.51e-55 190
MS.gene25177.t1 AT4G14090 29.574 470 258 12 2 420 7 454 4.02e-55 189
MS.gene25177.t1 AT4G15550 29.158 487 254 16 3 420 8 472 4.78e-53 184
MS.gene25177.t1 AT2G43840 27.637 474 255 13 8 424 7 449 3.64e-51 179
MS.gene25177.t1 AT2G43840 27.637 474 255 13 8 424 7 449 1.09e-50 177
MS.gene25177.t1 AT2G31750 29.661 472 263 15 1 421 1 454 1.58e-50 177
MS.gene25177.t1 AT2G31750 29.707 478 266 16 1 427 1 459 2.65e-50 177
MS.gene25177.t1 AT1G05560 29.691 485 238 17 5 421 2 451 2.45e-49 174
MS.gene25177.t1 AT1G05560 29.752 484 237 17 6 421 53 501 4.25e-49 175
MS.gene25177.t1 AT2G31790 25.745 470 266 10 8 418 8 453 1.66e-48 172
MS.gene25177.t1 AT1G22400 27.957 465 253 15 8 404 13 463 3.94e-47 169
MS.gene25177.t1 AT1G05530 28.782 476 247 15 10 421 7 454 9.31e-47 167
MS.gene25177.t1 AT1G22340 28.512 484 259 15 9 421 14 481 1.58e-46 167
MS.gene25177.t1 AT1G22360 26.994 489 277 15 1 421 1 477 2.21e-44 161
MS.gene25177.t1 AT1G24100 26.763 482 268 14 1 421 1 458 4.05e-43 157
MS.gene25177.t1 AT1G78270 27.609 460 258 13 10 405 15 463 4.73e-43 158
MS.gene25177.t1 AT1G22380 25.615 488 277 13 9 426 14 485 2.04e-41 153
MS.gene25177.t1 AT1G22360 25.971 489 270 15 1 421 1 465 3.95e-41 152
MS.gene25177.t1 AT1G22370 26.569 478 272 16 8 421 13 475 4.19e-41 152
MS.gene25177.t1 AT2G15490 27.310 487 278 14 3 421 2 480 1.56e-39 148
MS.gene25177.t1 AT2G15490 27.216 485 278 14 3 421 2 477 8.55e-39 146
MS.gene25177.t1 AT2G15480 26.653 484 274 14 7 421 9 480 1.03e-38 146
MS.gene25177.t1 AT2G36970 24.330 485 289 13 3 425 6 474 6.07e-36 138
MS.gene25177.t1 AT2G15480 25.911 494 275 15 7 421 9 490 9.61e-36 138
MS.gene25177.t1 AT4G34138 25.610 492 284 14 5 428 8 485 2.18e-31 125
MS.gene25177.t1 AT4G34131 26.186 485 272 18 7 420 9 478 1.53e-30 123
MS.gene25177.t1 AT2G28080 25.159 473 276 13 12 425 22 475 1.11e-29 120
MS.gene25177.t1 AT2G36770 24.547 497 274 18 6 421 12 488 6.54e-28 115
MS.gene25177.t1 AT2G23210 31.930 285 166 11 8 284 10 274 2.77e-27 110
MS.gene25177.t1 AT2G36760 24.330 485 290 13 6 421 12 488 3.56e-27 113
MS.gene25177.t1 AT4G34135 25.155 485 278 15 7 420 10 480 1.00e-26 112
MS.gene25177.t1 AT2G30140 25.949 474 254 19 9 421 14 451 5.99e-26 109
MS.gene25177.t1 AT2G36750 24.848 495 278 17 4 421 6 483 1.51e-25 108
MS.gene25177.t1 AT3G46660 26.033 484 246 20 9 422 15 456 1.56e-25 108
MS.gene25177.t1 AT5G05870 25.000 480 279 13 1 423 1 456 3.07e-25 107
MS.gene25177.t1 AT2G30140 25.738 474 254 19 9 421 14 450 3.23e-25 107
MS.gene25177.t1 AT5G59590 22.363 474 274 16 8 421 10 449 3.31e-24 104
MS.gene25177.t1 AT2G30150 25.466 483 246 18 9 421 14 452 4.49e-24 104
MS.gene25177.t1 AT2G30150 25.732 478 241 18 14 421 3 436 9.89e-24 103
MS.gene25177.t1 AT5G14860 24.899 494 279 17 1 421 1 475 3.11e-23 102
MS.gene25177.t1 AT3G46650 23.830 470 247 16 8 417 10 428 3.54e-23 101
MS.gene25177.t1 AT2G36780 23.374 492 284 14 7 421 13 488 7.79e-23 100
MS.gene25177.t1 AT4G34135 25.915 328 213 11 7 315 10 326 8.42e-23 99.0
MS.gene25177.t1 AT5G38040 24.043 470 255 18 16 421 18 449 8.91e-23 100
MS.gene25177.t1 AT5G59580 23.044 473 275 19 8 423 9 449 9.26e-23 100
MS.gene25177.t1 AT3G53160 24.089 494 290 17 1 421 1 482 1.99e-22 99.8
MS.gene25177.t1 AT3G46700 24.421 475 261 18 8 422 9 445 2.09e-22 99.4
MS.gene25177.t1 AT3G46670 23.701 481 261 17 8 422 9 449 2.15e-22 99.4
MS.gene25177.t1 AT3G46690 24.000 475 262 17 8 419 9 447 2.31e-22 99.4
MS.gene25177.t1 AT2G36790 25.205 488 282 17 6 421 11 487 3.19e-22 99.4
MS.gene25177.t1 AT5G03490 24.262 474 275 17 6 422 17 463 3.84e-22 98.6
MS.gene25177.t1 AT1G51210 25.000 444 252 18 2 393 15 429 8.02e-21 94.7
MS.gene25177.t1 AT2G26480 21.712 479 283 16 8 428 8 452 8.12e-21 94.7
MS.gene25177.t1 AT2G16890 25.105 478 275 21 8 421 9 467 1.41e-20 94.4
MS.gene25177.t1 AT5G38010 24.101 473 271 16 8 421 10 453 8.77e-20 91.7
MS.gene25177.t1 AT1G10400 25.212 353 208 9 116 420 117 461 1.02e-19 91.7
MS.gene25177.t1 AT1G22370 24.912 285 158 7 180 414 20 298 1.33e-19 89.4
MS.gene25177.t1 AT3G21780 20.902 488 291 15 7 421 3 468 1.95e-19 90.9
MS.gene25177.t1 AT3G55710 22.774 483 268 16 8 421 8 454 5.48e-19 89.4
MS.gene25177.t1 AT3G11340 22.863 468 273 15 9 421 10 444 6.52e-19 89.0
MS.gene25177.t1 AT3G46680 22.979 470 271 17 8 418 9 446 8.52e-19 88.6
MS.gene25177.t1 AT3G55700 22.338 479 285 15 1 421 1 450 9.34e-19 88.6
MS.gene25177.t1 AT5G05860 23.431 478 271 19 4 421 5 447 1.53e-18 87.8
MS.gene25177.t1 AT5G05900 25.052 479 269 21 1 421 1 447 2.99e-18 87.0
MS.gene25177.t1 AT5G12890 23.422 491 294 16 7 427 9 487 4.85e-18 86.7
MS.gene25177.t1 AT4G15280 22.701 511 265 18 4 421 32 505 6.35e-18 86.3
MS.gene25177.t1 AT4G15280 22.638 508 263 18 7 421 3 473 1.02e-17 85.5
MS.gene25177.t1 AT2G29740 23.298 382 226 11 1 342 1 355 2.44e-17 84.3
MS.gene25177.t1 AT3G02100 23.605 466 285 19 9 422 14 460 3.11e-17 84.0
MS.gene25177.t1 AT3G21790 20.817 514 276 16 9 426 5 483 3.13e-17 84.0
MS.gene25177.t1 AT5G17050 20.668 479 279 11 9 421 13 456 3.15e-17 84.0
MS.gene25177.t1 AT5G05880 22.803 478 282 15 1 421 1 448 4.28e-17 83.6
MS.gene25177.t1 AT5G05890 23.203 487 273 16 1 421 1 452 6.04e-17 83.2
MS.gene25177.t1 AT1G30530 23.285 481 267 15 6 421 7 450 1.12e-16 82.4
MS.gene25177.t1 AT3G46720 24.524 473 251 20 8 418 9 437 1.29e-16 82.0
MS.gene25177.t1 AT3G29630 27.809 356 208 13 1 342 1 321 3.61e-16 80.5
MS.gene25177.t1 AT3G21760 21.774 496 289 16 7 421 3 480 1.87e-15 78.6
MS.gene25177.t1 AT3G16520 28.731 268 124 11 207 420 204 458 5.82e-15 77.0
MS.gene25177.t1 AT5G54010 24.650 357 222 11 1 342 1 325 6.13e-15 77.0
MS.gene25177.t1 AT3G21800 20.724 497 283 20 9 421 6 475 6.14e-15 77.0
MS.gene25177.t1 AT3G16520 36.667 150 73 7 207 342 204 345 1.30e-14 75.9
MS.gene25177.t1 AT3G16520 36.667 150 73 7 207 342 204 345 1.33e-14 75.9
MS.gene25177.t1 AT4G01070 26.389 360 212 15 3 336 4 336 3.23e-14 74.7
MS.gene25177.t1 AT3G21750 21.188 505 269 17 7 421 3 468 3.35e-14 74.7
MS.gene25177.t1 AT4G01070 26.389 360 212 15 3 336 4 336 5.07e-14 73.6
MS.gene25177.t1 AT2G16890 24.476 429 242 20 8 373 9 418 1.59e-13 72.4
MS.gene25177.t1 AT2G29750 23.077 377 233 12 1 342 1 355 5.61e-13 70.9
MS.gene25177.t1 AT5G49690 23.123 333 228 9 7 332 9 320 3.15e-12 68.6
MS.gene25177.t1 AT4G15260 21.351 370 202 12 124 421 2 354 3.05e-11 65.1
MS.gene25177.t1 AT3G53150 20.525 419 256 11 7 359 21 428 6.96e-11 64.7
MS.gene25177.t1 AT5G66690 29.927 137 78 2 215 337 204 336 8.46e-11 64.3

Find 70 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTTGCACCTTTAATATT+TGG 0.144668 1.3:+17391511 None:intergenic
TCGGAATCTTGATGAATTTA+TGG 0.173256 1.3:-17390879 MS.gene25177:CDS
TTTAGTCCATATCCATTTCT+AGG 0.207542 1.3:-17391679 MS.gene25177:CDS
TGAAATTGCATATGGGTTAT+TGG 0.235835 1.3:-17391362 MS.gene25177:CDS
TAGAAGATGATGATCCTATT+AGG 0.242108 1.3:-17392023 MS.gene25177:CDS
TCTGTGGTTTATATTTCTTT+TGG 0.244642 1.3:-17391418 MS.gene25177:CDS
AGAAATGGATATGGACTAAA+AGG 0.255462 1.3:+17391682 None:intergenic
CTAAAAGGATGCAGAAAATC+TGG 0.296619 1.3:+17391697 None:intergenic
ATCCTTCTTATCTCATTTCC+AGG 0.324102 1.3:-17392228 MS.gene25177:CDS
TTGTTTATGATACAAGAAAT+TGG 0.331281 1.3:+17391910 None:intergenic
AAGGATACGAATGGGAGTTT+TGG 0.333339 1.3:+17392245 None:intergenic
ATATAAACCACAGAATCTTT+TGG 0.341319 1.3:+17391427 None:intergenic
GGTAATTGAACATCAATATA+AGG 0.343391 1.3:+17391748 None:intergenic
TGCAATCAAGTGGAAGAAAA+TGG 0.364528 1.3:-17390936 MS.gene25177:CDS
AGAAGATGATGATCCTATTA+GGG 0.383240 1.3:-17392022 MS.gene25177:CDS
GCTTATTAGAAGCAACAATA+GGG 0.383752 1.3:-17390985 MS.gene25177:CDS
CAAGTGAATGAAATTGCATA+TGG 0.385064 1.3:-17391370 MS.gene25177:CDS
CTATAACTATTTCAACAAAC+TGG 0.392630 1.3:-17391794 MS.gene25177:CDS
GTGAGAGAACCATCACCTAT+TGG 0.398358 1.3:+17392069 None:intergenic
GTAGGGATTAGATTGGGTTA+TGG 0.399166 1.3:-17391052 MS.gene25177:CDS
TCACAAAGATTTGCCCTAAT+AGG 0.414772 1.3:+17392009 None:intergenic
AAGATGAGTGTCCCTAGAAA+TGG 0.414833 1.3:+17391667 None:intergenic
TTGTATTTAAGAACTTGAAA+TGG 0.416855 1.3:+17391727 None:intergenic
TTTGCCAGATGGGTTCTTAG+AGG 0.420612 1.3:-17391272 MS.gene25177:CDS
ATCATGCTCTAGTTCTTCAT+AGG 0.422004 1.3:+17391597 None:intergenic
TGCTTATTAGAAGCAACAAT+AGG 0.433211 1.3:-17390986 MS.gene25177:CDS
GGGTTTATGTGTCCTTGTCC+TGG 0.439998 1.3:+17392210 None:intergenic
TTTGGTGTAGGGATTAGATT+GGG 0.453004 1.3:-17391058 MS.gene25177:CDS
AACCCTACTTCCTTAGGAGG+TGG 0.456306 1.3:+17391307 None:intergenic
AGTGTCCCTAGAAATGGATA+TGG 0.471591 1.3:+17391673 None:intergenic
TCACAAACCCAAGGAACAAA+AGG 0.474744 1.3:+17391886 None:intergenic
AAACCACCTCCTAAGGAAGT+AGG 0.476787 1.3:-17391310 MS.gene25177:CDS
ATTTCATTCACTTGTTCTTG+TGG 0.484886 1.3:+17391379 None:intergenic
GAGGAAGCAGTGGCCATTGG+TGG 0.491726 1.3:-17390911 MS.gene25177:CDS
TTAGTCCATATCCATTTCTA+GGG 0.493488 1.3:-17391678 MS.gene25177:CDS
TTAATCATTTGAGACAGAAA+AGG 0.493540 1.3:+17391955 None:intergenic
AGCAAAGTGTCTTGCTGCAA+AGG 0.495322 1.3:-17392175 MS.gene25177:CDS
GAGATAAGAAGGATACGAAT+GGG 0.498645 1.3:+17392237 None:intergenic
CTTATCTCATTTCCAGGACA+AGG 0.501885 1.3:-17392222 MS.gene25177:CDS
CATTCACTTGTTCTTGTGGA+AGG 0.504042 1.3:+17391383 None:intergenic
GTTTCCTCTAAGAACCCATC+TGG 0.511421 1.3:+17391268 None:intergenic
GCGGAGGAAGCAGTGGCCAT+TGG 0.515638 1.3:-17390914 MS.gene25177:CDS
AACCACCTCCTAAGGAAGTA+GGG 0.521841 1.3:-17391309 MS.gene25177:CDS
GTCCTGGAAATGAGATAAGA+AGG 0.523887 1.3:+17392226 None:intergenic
TCAATCCACATAAGATCCAT+TGG 0.525363 1.3:-17391550 MS.gene25177:CDS
GGTACTAAAACCACCTCCTA+AGG 0.526436 1.3:-17391317 MS.gene25177:CDS
TTTAACCCTACTTCCTTAGG+AGG 0.534962 1.3:+17391304 None:intergenic
ATGGACCAATGGATCTTATG+TGG 0.538991 1.3:+17391545 None:intergenic
TTCATCACAACAAAGAAAGC+TGG 0.541707 1.3:-17392138 MS.gene25177:CDS
TAAAAGGATGCAGAAAATCT+GGG 0.544140 1.3:+17391698 None:intergenic
GCAAAGTGTCTTGCTGCAAA+GGG 0.547523 1.3:-17392174 MS.gene25177:CDS
CACTTTGCTAATCTAAGAAG+AGG 0.549473 1.3:+17392189 None:intergenic
CACAAAGCCAAAAGATTCTG+TGG 0.563752 1.3:-17391434 MS.gene25177:CDS
TGAGATAAGAAGGATACGAA+TGG 0.576717 1.3:+17392236 None:intergenic
AAGTGAATGAAATTGCATAT+GGG 0.578687 1.3:-17391369 MS.gene25177:CDS
TGAAGCAAAATGCAATCAAG+TGG 0.582061 1.3:-17390946 MS.gene25177:CDS
AAAGGTGCAAGTAATATTCG+TGG 0.583488 1.3:-17391502 MS.gene25177:CDS
TGAACCCATAATAAAACAGA+AGG 0.585096 1.3:+17391841 None:intergenic
TCACTCACTCCAATAGGTGA+TGG 0.594365 1.3:-17392078 MS.gene25177:CDS
ACTTTGCTAATCTAAGAAGA+GGG 0.596564 1.3:+17392190 None:intergenic
TAAATTTGTAACAAGAGATG+AGG 0.602301 1.3:-17391017 MS.gene25177:CDS
CCATTGGTGGATCTTCTGAT+CGG 0.610543 1.3:-17390898 MS.gene25177:CDS
GAAAATGGCGGAGGAAGCAG+TGG 0.620986 1.3:-17390921 MS.gene25177:CDS
CTTATTAGAAGCAACAATAG+GGG 0.627994 1.3:-17390984 MS.gene25177:CDS
ATGATTGCAATATTATAGAG+TGG 0.634609 1.3:-17391462 MS.gene25177:CDS
CAAGTGGAAGAAAATGGCGG+AGG 0.655929 1.3:-17390930 MS.gene25177:CDS
CCGATCAGAAGATCCACCAA+TGG 0.664704 1.3:+17390898 None:intergenic
TGAGCTACATCACAAACCCA+AGG 0.685226 1.3:+17391877 None:intergenic
TGTGATGTAGCTCATGAACA+TGG 0.687366 1.3:-17391868 MS.gene25177:CDS
AATCAAGTGGAAGAAAATGG+CGG 0.731684 1.3:-17390933 MS.gene25177:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAATCCAAATATTAA+AGG - chr1.3:17391579-17391598 MS.gene25177:CDS 10.0%
!!! ATATTTGGATTTTTAAACAA+TGG + chr1.3:17391576-17391595 None:intergenic 15.0%
!! TTGTATTTAAGAACTTGAAA+TGG + chr1.3:17391375-17391394 None:intergenic 20.0%
!! TTGTTTATGATACAAGAAAT+TGG + chr1.3:17391192-17391211 None:intergenic 20.0%
!!! ATAGAACAACTAAAACTTTT+TGG - chr1.3:17391117-17391136 MS.gene25177:intron 20.0%
!!! ATTCTAATGTTTCATTTTTG+TGG - chr1.3:17391760-17391779 MS.gene25177:CDS 20.0%
!!! TAGAACAACTAAAACTTTTT+GGG - chr1.3:17391118-17391137 MS.gene25177:intron 20.0%
!!! TATTCCTTCTGTTTTATTAT+GGG - chr1.3:17391254-17391273 MS.gene25177:intron 20.0%
!!! TTCTAATGTTTCATTTTTGT+GGG - chr1.3:17391761-17391780 MS.gene25177:CDS 20.0%
! AAGTGAATGAAATTGCATAT+GGG - chr1.3:17391730-17391749 MS.gene25177:CDS 25.0%
! ATGATTGCAATATTATAGAG+TGG - chr1.3:17391637-17391656 MS.gene25177:CDS 25.0%
! CTATAACTATTTCAACAAAC+TGG - chr1.3:17391305-17391324 MS.gene25177:CDS 25.0%
! GGTAATTGAACATCAATATA+AGG + chr1.3:17391354-17391373 None:intergenic 25.0%
! TAAATTTGTAACAAGAGATG+AGG - chr1.3:17392082-17392101 MS.gene25177:CDS 25.0%
! TTACTTGCACCTTTAATATT+TGG + chr1.3:17391591-17391610 None:intergenic 25.0%
!! AGTAACAAATGCAAAGTTTT+TGG - chr1.3:17392010-17392029 MS.gene25177:CDS 25.0%
!! ATATAAACCACAGAATCTTT+TGG + chr1.3:17391675-17391694 None:intergenic 25.0%
!! ATTTTTAAACAATGGACCAA+TGG + chr1.3:17391568-17391587 None:intergenic 25.0%
!! CTGTGGTTTATATTTCTTTT+GGG - chr1.3:17391682-17391701 MS.gene25177:CDS 25.0%
!! TCTGTGGTTTATATTTCTTT+TGG - chr1.3:17391681-17391700 MS.gene25177:CDS 25.0%
!! TTAATCATTTGAGACAGAAA+AGG + chr1.3:17391147-17391166 None:intergenic 25.0%
!!! AAGTTTTTGGTAGATGTTTT+TGG - chr1.3:17392023-17392042 MS.gene25177:CDS 25.0%
!!! ATATAAGGTTCTTTTTCAGA+AGG + chr1.3:17391339-17391358 None:intergenic 25.0%
!!! GTATTCCTTCTGTTTTATTA+TGG - chr1.3:17391253-17391272 MS.gene25177:intron 25.0%
!!! TATAAGGTTCTTTTTCAGAA+GGG + chr1.3:17391338-17391357 None:intergenic 25.0%
ACTTTGCTAATCTAAGAAGA+GGG + chr1.3:17390912-17390931 None:intergenic 30.0%
AGAAGATGATGATCCTATTA+GGG - chr1.3:17391077-17391096 MS.gene25177:CDS 30.0%
ATTTCATTCACTTGTTCTTG+TGG + chr1.3:17391723-17391742 None:intergenic 30.0%
CAAGTGAATGAAATTGCATA+TGG - chr1.3:17391729-17391748 MS.gene25177:CDS 30.0%
CTTATTAGAAGCAACAATAG+GGG - chr1.3:17392115-17392134 MS.gene25177:CDS 30.0%
GCTTATTAGAAGCAACAATA+GGG - chr1.3:17392114-17392133 MS.gene25177:CDS 30.0%
GTATGTTTCATAACACATTG+TGG - chr1.3:17391918-17391937 MS.gene25177:CDS 30.0%
GTTATGAAACATACCAATGA+AGG + chr1.3:17391912-17391931 None:intergenic 30.0%
TAAAAGGATGCAGAAAATCT+GGG + chr1.3:17391404-17391423 None:intergenic 30.0%
TAGAAGATGATGATCCTATT+AGG - chr1.3:17391076-17391095 MS.gene25177:CDS 30.0%
TCGGAATCTTGATGAATTTA+TGG - chr1.3:17392220-17392239 MS.gene25177:CDS 30.0%
TGAACCCATAATAAAACAGA+AGG + chr1.3:17391261-17391280 None:intergenic 30.0%
TGCTTATTAGAAGCAACAAT+AGG - chr1.3:17392113-17392132 MS.gene25177:CDS 30.0%
TTAGTCCATATCCATTTCTA+GGG - chr1.3:17391421-17391440 MS.gene25177:CDS 30.0%
TTTAGTCCATATCCATTTCT+AGG - chr1.3:17391420-17391439 MS.gene25177:CDS 30.0%
! AAACAATCCTTTTGTTCCTT+GGG - chr1.3:17391206-17391225 MS.gene25177:intron 30.0%
! AGAAATGGATATGGACTAAA+AGG + chr1.3:17391420-17391439 None:intergenic 30.0%
! TAAACAATCCTTTTGTTCCT+TGG - chr1.3:17391205-17391224 MS.gene25177:intron 30.0%
! TGAAATTGCATATGGGTTAT+TGG - chr1.3:17391737-17391756 MS.gene25177:CDS 30.0%
!! TCAATAGAAGCACTTAGTTT+AGG - chr1.3:17391951-17391970 MS.gene25177:CDS 30.0%
!!! ACTTTTGAGTTCTTTCATGA+TGG - chr1.3:17391051-17391070 MS.gene25177:CDS 30.0%
AATCAAGTGGAAGAAAATGG+CGG - chr1.3:17392166-17392185 MS.gene25177:CDS 35.0%
AATGTTGACATTTCCAGCAT+GGG - chr1.3:17391980-17391999 MS.gene25177:CDS 35.0%
AGAGAGGAAAAGTTGTGAAA+TGG - chr1.3:17391859-17391878 MS.gene25177:CDS 35.0%
ATCCTTCTTATCTCATTTCC+AGG - chr1.3:17390871-17390890 MS.gene25177:CDS 35.0%
CACTTTGCTAATCTAAGAAG+AGG + chr1.3:17390913-17390932 None:intergenic 35.0%
CTAAAAGGATGCAGAAAATC+TGG + chr1.3:17391405-17391424 None:intergenic 35.0%
GAAAAATCACTCACTCCAAT+AGG - chr1.3:17391015-17391034 MS.gene25177:CDS 35.0%
GAGATAAGAAGGATACGAAT+GGG + chr1.3:17390865-17390884 None:intergenic 35.0%
GTTTCATAACACATTGTGGT+TGG - chr1.3:17391922-17391941 MS.gene25177:CDS 35.0%
TAATGTTGACATTTCCAGCA+TGG - chr1.3:17391979-17391998 MS.gene25177:CDS 35.0%
TCAATCCACATAAGATCCAT+TGG - chr1.3:17391549-17391568 MS.gene25177:CDS 35.0%
TCACAAAGATTTGCCCTAAT+AGG + chr1.3:17391093-17391112 None:intergenic 35.0%
TGAAGCAAAATGCAATCAAG+TGG - chr1.3:17392153-17392172 MS.gene25177:CDS 35.0%
TGAGATAAGAAGGATACGAA+TGG + chr1.3:17390866-17390885 None:intergenic 35.0%
TGCAATCAAGTGGAAGAAAA+TGG - chr1.3:17392163-17392182 MS.gene25177:CDS 35.0%
TTCATCACAACAAAGAAAGC+TGG - chr1.3:17390961-17390980 MS.gene25177:CDS 35.0%
! AAAGAACATGTTTTGCCAGA+TGG - chr1.3:17391816-17391835 MS.gene25177:CDS 35.0%
! AAAGGTGCAAGTAATATTCG+TGG - chr1.3:17391597-17391616 MS.gene25177:CDS 35.0%
! AAGAACATGTTTTGCCAGAT+GGG - chr1.3:17391817-17391836 MS.gene25177:CDS 35.0%
! TCTTTTAACCCTACTTCCTT+AGG + chr1.3:17391801-17391820 None:intergenic 35.0%
! TTTGGTGTAGGGATTAGATT+GGG - chr1.3:17392041-17392060 MS.gene25177:CDS 35.0%
!! ATCATGCTCTAGTTCTTCAT+AGG + chr1.3:17391505-17391524 None:intergenic 35.0%
!! TTTTGGTGTAGGGATTAGAT+TGG - chr1.3:17392040-17392059 MS.gene25177:CDS 35.0%
!!! TGGTAGATGTTTTTGGTGTA+GGG - chr1.3:17392030-17392049 MS.gene25177:CDS 35.0%
!!! TTGGTAGATGTTTTTGGTGT+AGG - chr1.3:17392029-17392048 MS.gene25177:CDS 35.0%
AACAATAGGGGAAAAAGCTG+AGG - chr1.3:17392127-17392146 MS.gene25177:CDS 40.0%
AAGATGAGTGTCCCTAGAAA+TGG + chr1.3:17391435-17391454 None:intergenic 40.0%
AGTGTCCCTAGAAATGGATA+TGG + chr1.3:17391429-17391448 None:intergenic 40.0%
ATGGACCAATGGATCTTATG+TGG + chr1.3:17391557-17391576 None:intergenic 40.0%
ATGTTGACATTTCCAGCATG+GGG - chr1.3:17391981-17392000 MS.gene25177:CDS 40.0%
CACAAAGCCAAAAGATTCTG+TGG - chr1.3:17391665-17391684 MS.gene25177:CDS 40.0%
CATTCACTTGTTCTTGTGGA+AGG + chr1.3:17391719-17391738 None:intergenic 40.0%
CTTATCTCATTTCCAGGACA+AGG - chr1.3:17390877-17390896 MS.gene25177:CDS 40.0%
GTAGGGATTAGATTGGGTTA+TGG - chr1.3:17392047-17392066 MS.gene25177:CDS 40.0%
GTCCTGGAAATGAGATAAGA+AGG + chr1.3:17390876-17390895 None:intergenic 40.0%
TCACAAACCCAAGGAACAAA+AGG + chr1.3:17391216-17391235 None:intergenic 40.0%
TGAGCCAATACTTCTTCTTG+TGG + chr1.3:17391888-17391907 None:intergenic 40.0%
TGTGATGTAGCTCATGAACA+TGG - chr1.3:17391231-17391250 MS.gene25177:intron 40.0%
TTAGAGGAAACAAGTGAGAG+AGG - chr1.3:17391843-17391862 MS.gene25177:CDS 40.0%
TTTAACCCTACTTCCTTAGG+AGG + chr1.3:17391798-17391817 None:intergenic 40.0%
! AAGGATACGAATGGGAGTTT+TGG + chr1.3:17390857-17390876 None:intergenic 40.0%
! GAGTCCACAAGAAGAAGTAT+TGG - chr1.3:17391881-17391900 MS.gene25177:CDS 40.0%
!! AGTATTGGCTCATCCTTCAT+TGG - chr1.3:17391896-17391915 MS.gene25177:CDS 40.0%
AAACCACCTCCTAAGGAAGT+AGG - chr1.3:17391789-17391808 MS.gene25177:CDS 45.0%
AACCACCTCCTAAGGAAGTA+GGG - chr1.3:17391790-17391809 MS.gene25177:CDS 45.0%
GGTACTAAAACCACCTCCTA+AGG - chr1.3:17391782-17391801 MS.gene25177:CDS 45.0%
GTAAGCAGCAAAAACTGCAG+TGG + chr1.3:17391286-17391305 None:intergenic 45.0%
GTGAGAGAACCATCACCTAT+TGG + chr1.3:17391033-17391052 None:intergenic 45.0%
TCACTCACTCCAATAGGTGA+TGG - chr1.3:17391021-17391040 MS.gene25177:CDS 45.0%
TGAGCTACATCACAAACCCA+AGG + chr1.3:17391225-17391244 None:intergenic 45.0%
! AGCAAAGTGTCTTGCTGCAA+AGG - chr1.3:17390924-17390943 MS.gene25177:CDS 45.0%
! CCATTGGTGGATCTTCTGAT+CGG - chr1.3:17392201-17392220 MS.gene25177:CDS 45.0%
! GCAAAGTGTCTTGCTGCAAA+GGG - chr1.3:17390925-17390944 MS.gene25177:CDS 45.0%
! GTTTCCTCTAAGAACCCATC+TGG + chr1.3:17391834-17391853 None:intergenic 45.0%
! TTTGCCAGATGGGTTCTTAG+AGG - chr1.3:17391827-17391846 MS.gene25177:CDS 45.0%
AACCCTACTTCCTTAGGAGG+TGG + chr1.3:17391795-17391814 None:intergenic 50.0%
CAAGTGGAAGAAAATGGCGG+AGG - chr1.3:17392169-17392188 MS.gene25177:CDS 50.0%
CCGATCAGAAGATCCACCAA+TGG + chr1.3:17392204-17392223 None:intergenic 50.0%
GGGTTTATGTGTCCTTGTCC+TGG + chr1.3:17390892-17390911 None:intergenic 50.0%
GTTACTTGATCACCCCATGC+TGG + chr1.3:17391996-17392015 None:intergenic 50.0%
! GAAAATGGCGGAGGAAGCAG+TGG - chr1.3:17392178-17392197 MS.gene25177:CDS 55.0%
GAGGAAGCAGTGGCCATTGG+TGG - chr1.3:17392188-17392207 MS.gene25177:CDS 60.0%
GCGGAGGAAGCAGTGGCCAT+TGG - chr1.3:17392185-17392204 MS.gene25177:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 17390847 17392274 17390847 ID=MS.gene25177
chr1.3 mRNA 17390847 17392274 17390847 ID=MS.gene25177.t1;Parent=MS.gene25177
chr1.3 exon 17391266 17392274 17391266 ID=MS.gene25177.t1.exon1;Parent=MS.gene25177.t1
chr1.3 CDS 17391266 17392274 17391266 ID=cds.MS.gene25177.t1;Parent=MS.gene25177.t1
chr1.3 exon 17390847 17391124 17390847 ID=MS.gene25177.t1.exon2;Parent=MS.gene25177.t1
chr1.3 CDS 17390847 17391124 17390847 ID=cds.MS.gene25177.t1;Parent=MS.gene25177.t1
Gene Sequence

>MS.gene25177

ATGGGATCCAAAACTCCCATTCGTATCCTTCTTATCTCATTTCCAGGACAAGGACACATAAACCCTCTTCTTAGATTAGCAAAGTGTCTTGCTGCAAAGGGTGCTTCTGTCATCTTCATCACAACAAAGAAAGCTGGCAAAGACATACAAACTGTTAACAACATTGTTGAAAAATCACTCACTCCAATAGGTGATGGTTCTCTCACTTTTGAGTTCTTTCATGATGGTTTAGAAGATGATGATCCTATTAGGGCAAATCTTTGTGACTACATAGAACAACTAAAACTTTTTGGGAAACCTTTTCTGTCTCAAATGATTAAGAATCATGCTGAGTCAAACAAACCAATTTCTTGTATCATAAACAATCCTTTTGTTCCTTGGGTTTGTGATGTAGCTCATGAACATGGTATTCCTTCTGTTTTATTATGGGTTCAATCCACTGCAGTTTTTGCTGCTTACTATAACTATTTCAACAAACTGGTACGTTTCCCTTCTGAAAAAGAACCTTATATTGATGTTCAATTACCATTTCAAGTTCTTAAATACAATGAAATCCCAGATTTTCTGCATCCTTTTAGTCCATATCCATTTCTAGGGACACTCATCTTAGAACAGTTTAAGAATTTATCTAAAGTGTTTTGTGTTTTAGTAGAAACCTATGAAGAACTAGAGCATGATTTCATTGACTATATTTCAAAAAAATCAATCCACATAAGATCCATTGGTCCATTGTTTAAAAATCCAAATATTAAAGGTGCAAGTAATATTCGTGGTGATTTTGTTAAGAGTGATGATTGCAATATTATAGAGTGGCTAAACACAAAGCCAAAAGATTCTGTGGTTTATATTTCTTTTGGGACTATTGTGTACCTTCCACAAGAACAAGTGAATGAAATTGCATATGGGTTATTGGATTCTAATGTTTCATTTTTGTGGGTACTAAAACCACCTCCTAAGGAAGTAGGGTTAAAAGAACATGTTTTGCCAGATGGGTTCTTAGAGGAAACAAGTGAGAGAGGAAAAGTTGTGAAATGGAGTCCACAAGAAGAAGTATTGGCTCATCCTTCATTGGTATGTTTCATAACACATTGTGGTTGGAATTCTTCAATAGAAGCACTTAGTTTAGGAGTTCTAATGTTGACATTTCCAGCATGGGGTGATCAAGTAACAAATGCAAAGTTTTTGGTAGATGTTTTTGGTGTAGGGATTAGATTGGGTTATGGTATGATTGAAAATAAATTTGTAACAAGAGATGAGGTGAAAAAGTGCTTATTAGAAGCAACAATAGGGGAAAAAGCTGAGGATTTGAAGCAAAATGCAATCAAGTGGAAGAAAATGGCGGAGGAAGCAGTGGCCATTGGTGGATCTTCTGATCGGAATCTTGATGAATTTATGGAAGACATTAAGATCAAAATGATTGAACAATAA
Protein sequence

>MS.gene25177.t1

MGSKTPIRILLISFPGQGHINPLLRLAKCLAAKGASVIFITTKKAGKDIQTVNNIVEKSLTPIGDGSLTFEFFHDGLEDDDPIRANLCDYIEQLKLFGKPFLSQMIKNHAESNKPISCIINNPFVPWVCDVAHEHGIPSVLLWVQSTAVFAAYYNYFNKLVRFPSEKEPYIDVQLPFQVLKYNEIPDFLHPFSPYPFLGTLILEQFKNLSKVFCVLVETYEELEHDFIDYISKKSIHIRSIGPLFKNPNIKGASNIRGDFVKSDDCNIIEWLNTKPKDSVVYISFGTIVYLPQEQVNEIAYGLLDSNVSFLWVLKPPPKEVGLKEHVLPDGFLEETTWGDQVTNAKFLVDVFGVGIRLGYGMIENKFVTRDEVKKCLLEATIGEKAEDLKQNAIKWKKMAEEAVAIGGSSDRNLDEFMEDIKIKMIEQ