AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26134

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26134.t1 MTR_5g077770 97.521 726 18 0 1 726 110 835 0.0 1463
MS.gene26134.t1 MTR_4g113530 34.488 664 408 10 2 649 75 727 1.13e-120 382
MS.gene26134.t1 MTR_2g006870 31.565 735 466 14 13 724 106 826 1.29e-109 352
MS.gene26134.t1 MTR_3g107720 33.638 657 419 8 2 649 93 741 1.35e-109 353
MS.gene26134.t1 MTR_1g011755 29.885 783 463 15 2 722 80 838 1.63e-103 336
MS.gene26134.t1 MTR_2g019530 29.380 742 453 19 2 722 80 771 8.02e-88 293
MS.gene26134.t1 MTR_3g108320 36.279 430 255 9 12 432 83 502 2.67e-81 269
MS.gene26134.t1 MTR_3g108320 36.279 430 255 9 12 432 83 502 3.38e-81 269
MS.gene26134.t1 MTR_3g108320 36.279 430 255 9 12 432 83 502 1.15e-80 270
MS.gene26134.t1 MTR_8g446430 34.180 433 268 7 2 426 69 492 4.67e-73 251
MS.gene26134.t1 MTR_8g046440 33.700 273 172 4 150 420 17 282 1.96e-46 168
MS.gene26134.t1 MTR_1g040590 24.055 291 195 7 104 390 13 281 1.19e-20 93.2
MS.gene26134.t1 MTR_4g113370 22.870 223 167 3 200 418 5 226 6.68e-17 81.3
MS.gene26134.t1 MTR_2g017825 42.857 105 59 1 532 636 28 131 8.30e-17 82.0
MS.gene26134.t1 MTR_2g017825 32.407 108 73 0 429 536 21 128 5.06e-12 67.8
MS.gene26134.t1 MTR_2g017825 42.857 105 59 1 532 636 28 131 1.18e-16 82.8
MS.gene26134.t1 MTR_2g017825 32.407 108 73 0 429 536 21 128 6.10e-12 68.2
MS.gene26134.t1 MTR_2g017825 42.857 105 59 1 532 636 28 131 1.64e-16 81.6
MS.gene26134.t1 MTR_2g017825 32.407 108 73 0 429 536 21 128 7.44e-12 67.8
MS.gene26134.t1 MTR_2g017825 42.857 105 59 1 532 636 28 131 1.72e-16 82.0
MS.gene26134.t1 MTR_2g017825 32.407 108 73 0 429 536 21 128 6.50e-12 68.2
MS.gene26134.t1 MTR_0279s0030 29.148 223 141 6 13 234 41 247 1.76e-16 82.4
MS.gene26134.t1 MTR_2g017825 44.211 95 53 0 542 636 37 131 3.51e-16 82.0
MS.gene26134.t1 MTR_2g017825 32.407 108 73 0 429 536 21 128 8.74e-12 68.6
MS.gene26134.t1 MTR_2g017825 44.211 95 53 0 542 636 37 131 3.58e-16 82.0
MS.gene26134.t1 MTR_2g017825 32.407 108 73 0 429 536 21 128 8.47e-12 68.6
MS.gene26134.t1 MTR_1g064240 26.816 179 128 2 173 348 342 520 1.29e-15 81.3
MS.gene26134.t1 MTR_5g022050 38.312 154 89 2 482 629 262 415 6.51e-15 78.2
MS.gene26134.t1 MTR_5g043640 35.443 158 97 2 476 628 51 208 1.55e-14 74.3
MS.gene26134.t1 MTR_5g043640 34.921 126 80 1 457 580 101 226 7.33e-13 69.7
MS.gene26134.t1 MTR_4g058730 22.564 195 148 2 158 349 315 509 2.79e-13 73.6
MS.gene26134.t1 MTR_6g027840 31.288 163 98 3 470 628 297 449 3.97e-13 73.2
MS.gene26134.t1 MTR_5g023090 32.227 211 137 2 425 629 239 449 8.54e-13 71.6
MS.gene26134.t1 MTR_2g094860 23.196 194 146 2 158 348 333 526 1.59e-12 71.2
MS.gene26134.t1 MTR_4g130820 21.628 393 242 12 24 350 162 554 1.88e-12 71.2
MS.gene26134.t1 MTR_4g092760 30.208 192 130 3 448 635 25 216 2.30e-12 70.5
MS.gene26134.t1 MTR_4g129470 30.131 229 112 9 454 637 24 249 2.81e-12 70.1
MS.gene26134.t1 MTR_7g034605 24.490 196 140 3 157 349 311 501 5.03e-12 69.7
MS.gene26134.t1 MTR_7g115280 29.384 211 144 4 420 628 64 271 8.81e-12 68.6
MS.gene26134.t1 MTR_5g091880 34.375 96 63 0 445 540 49 144 9.03e-12 68.6
MS.gene26134.t1 MTR_5g091880 44.737 76 42 0 554 629 61 136 4.63e-11 66.2
MS.gene26134.t1 MTR_4g116160 31.844 179 118 3 457 631 47 225 9.12e-12 68.6
MS.gene26134.t1 MTR_3g491870 40.449 89 53 0 454 542 245 333 1.24e-11 67.4
MS.gene26134.t1 MTR_1g112830 30.052 193 131 3 443 631 132 324 1.64e-11 68.2
MS.gene26134.t1 MTR_2g048680 37.815 119 72 1 498 614 87 205 4.08e-11 63.9
MS.gene26134.t1 MTR_4g116160 29.902 204 133 4 457 650 47 250 4.90e-11 66.6
MS.gene26134.t1 MTR_4g082325 55.000 60 27 0 570 629 46 105 5.17e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26134.t1 AT3G02850 73.967 726 187 2 1 724 102 827 0.0 1134
MS.gene26134.t1 AT5G37500 69.494 731 216 4 1 724 85 815 0.0 1071
MS.gene26134.t1 AT5G37500 67.463 753 216 5 1 724 31 783 0.0 1060
MS.gene26134.t1 AT5G37500 67.463 753 216 5 1 724 85 837 0.0 1059
MS.gene26134.t1 AT3G02850 76.131 641 152 1 1 640 102 742 0.0 1039
MS.gene26134.t1 AT5G37500 71.111 630 159 2 1 607 85 714 0.0 934
MS.gene26134.t1 AT3G02850 78.926 484 101 1 1 483 102 585 0.0 813
MS.gene26134.t1 AT2G26650 35.257 641 387 9 2 630 78 702 7.07e-118 374
MS.gene26134.t1 AT2G26650 35.073 613 370 9 30 630 1 597 2.38e-112 357
MS.gene26134.t1 AT2G25600 33.692 650 412 8 2 642 101 740 1.23e-109 353
MS.gene26134.t1 AT4G22200 31.436 738 453 14 2 722 96 797 3.73e-106 342
MS.gene26134.t1 AT4G32500 33.076 647 406 9 2 635 99 731 9.62e-106 343
MS.gene26134.t1 AT5G46240 36.636 434 258 7 1 426 79 503 4.67e-84 280
MS.gene26134.t1 AT4G18290 37.011 435 255 8 1 426 79 503 2.05e-81 273
MS.gene26134.t1 AT4G18290 37.011 435 255 8 1 426 90 514 2.08e-81 274
MS.gene26134.t1 AT4G32650 37.587 431 244 10 2 420 107 524 2.78e-77 260
MS.gene26134.t1 AT4G32650 37.587 431 244 10 2 420 107 524 3.73e-77 261
MS.gene26134.t1 AT4G32650 37.587 431 244 10 2 420 107 524 4.09e-77 261
MS.gene26134.t1 AT4G22200 32.929 495 307 10 2 483 96 578 1.23e-71 245
MS.gene26134.t1 AT4G18950 46.591 88 47 0 542 629 42 129 3.04e-14 76.3
MS.gene26134.t1 AT4G18950 46.591 88 47 0 542 629 42 129 3.20e-14 76.3
MS.gene26134.t1 AT3G58760 42.593 108 56 3 554 661 60 161 6.82e-14 74.3
MS.gene26134.t1 AT3G58760 42.593 108 56 3 554 661 123 224 1.46e-13 73.9
MS.gene26134.t1 AT3G58760 42.593 108 56 3 554 661 123 224 1.46e-13 73.9
MS.gene26134.t1 AT2G14255 29.612 206 141 3 434 635 12 217 1.65e-13 74.3
MS.gene26134.t1 AT3G58760 42.593 108 56 3 554 661 60 161 1.68e-13 73.9
MS.gene26134.t1 AT3G58760 42.593 108 56 3 554 661 123 224 2.86e-13 73.6
MS.gene26134.t1 AT3G58760 42.593 108 56 3 554 661 123 224 2.86e-13 73.6
MS.gene26134.t1 AT3G04710 32.778 180 113 4 453 628 320 495 5.69e-13 72.8
MS.gene26134.t1 AT2G03430 32.911 158 101 2 476 628 44 201 6.04e-13 69.7
MS.gene26134.t1 AT2G03430 32.653 147 94 2 457 598 94 240 2.54e-11 64.7
MS.gene26134.t1 AT2G03430 34.109 129 80 1 505 628 40 168 2.81e-11 64.7
MS.gene26134.t1 AT3G04710 32.778 180 113 4 453 628 96 271 8.11e-13 71.6
MS.gene26134.t1 AT5G20350 30.093 216 147 3 420 631 5 220 9.01e-13 72.0
MS.gene26134.t1 AT2G24610 25.000 180 132 2 172 348 348 527 2.36e-12 70.9
MS.gene26134.t1 AT2G24610 25.000 180 132 2 172 348 363 542 2.44e-12 70.9
MS.gene26134.t1 AT2G28260 23.590 195 146 2 157 348 283 477 4.44e-12 70.1
MS.gene26134.t1 AT2G28260 23.590 195 146 2 157 348 323 517 4.57e-12 70.1
MS.gene26134.t1 AT5G66055 40.000 135 77 4 482 613 263 396 5.73e-12 68.9
MS.gene26134.t1 AT5G57940 27.072 181 129 3 173 350 366 546 5.99e-12 69.7
MS.gene26134.t1 AT5G57940 27.072 181 129 3 173 350 366 546 5.99e-12 69.7
MS.gene26134.t1 AT5G57940 27.072 181 129 3 173 350 359 539 6.60e-12 69.3
MS.gene26134.t1 AT2G31820 28.571 175 119 4 475 643 254 428 7.10e-12 69.3
MS.gene26134.t1 AT3G04710 32.778 180 112 5 453 628 96 270 1.30e-11 67.8
MS.gene26134.t1 AT2G31800 31.148 122 81 2 551 672 83 201 8.72e-11 65.5
MS.gene26134.t1 AT1G15990 24.862 181 133 3 173 350 370 550 9.87e-11 65.9

Find 134 sgRNAs with CRISPR-Local

Find 416 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATTTCTTCTTTGTTCTTT+TGG 0.087746 5.4:-57062625 None:intergenic
ACCTTTGTCATTGATCTTCT+TGG 0.183191 5.4:+57056468 MS.gene26134:CDS
CATGAGGAATTCTTTCTTCC+TGG 0.186483 5.4:+57060099 MS.gene26134:CDS
TCCCATTTCTATTCGATCTA+AGG 0.234403 5.4:+57058758 MS.gene26134:CDS
GGGAACACTGTGCACTTCTT+TGG 0.240600 5.4:-57062586 None:intergenic
TATTGACGTTAGCATGATTA+AGG 0.255569 5.4:+57062756 MS.gene26134:CDS
GTGTAGCCCTCTTGGGATTC+AGG 0.256246 5.4:-57057514 None:intergenic
AGTTCAGAGAAATTGATATT+TGG 0.258991 5.4:+57057578 MS.gene26134:CDS
CAGATTCTAGCTTTCCAATA+TGG 0.267039 5.4:-57061001 None:intergenic
GATCAAAGACTGAAAAGTTT+AGG 0.268961 5.4:+57058604 MS.gene26134:CDS
TATCAGTACCTGTAATTTCT+TGG 0.280875 5.4:-57062445 None:intergenic
CTTTCATCTTTCAGGTTACT+AGG 0.281282 5.4:+57060073 MS.gene26134:intron
GAGATTCGGATTATCTTAAA+AGG 0.294278 5.4:+57061588 MS.gene26134:CDS
GTTTCATTTGACATGGTTCT+TGG 0.295468 5.4:+57058540 MS.gene26134:CDS
AGGAAGTGAGGTACCTATTA+TGG 0.297786 5.4:+57057329 MS.gene26134:CDS
TTCTTCACCCCAATGGAGTT+TGG 0.299257 5.4:+57055991 None:intergenic
GGATATCCGTGAACAAATAA+AGG 0.308926 5.4:+57058677 MS.gene26134:CDS
TACCTTAGATCGAATAGAAA+TGG 0.310873 5.4:-57058760 None:intergenic
GAAGAAATGGAATAGTATTA+TGG 0.316456 5.4:+57062638 MS.gene26134:CDS
CTAGAGCGCAACAGCTCATT+TGG 0.327681 5.4:+57060600 MS.gene26134:CDS
ATCTTCTTGGATGTATGCCC+TGG 0.329468 5.4:+57056481 MS.gene26134:CDS
TATATAATCTGATCCATAAT+AGG 0.329517 5.4:-57057342 None:intergenic
CACTGACGCTGCAGTCCTTC+AGG 0.339626 5.4:+57058731 MS.gene26134:CDS
ATCAGTACCTGTAATTTCTT+GGG 0.340308 5.4:-57062444 None:intergenic
CTATCCATGTGTAGCCCTCT+TGG 0.343434 5.4:-57057522 None:intergenic
CGTAATTTCACAGATAACTT+TGG 0.350102 5.4:+57061440 MS.gene26134:intron
TCAATTACAGTACCTGTCTT+TGG 0.359155 5.4:-57061738 None:intergenic
GCCAGAGAATCTCTTTATAC+TGG 0.359937 5.4:+57056029 MS.gene26134:CDS
ATGGATAGGAAGTTTGAAAC+TGG 0.364533 5.4:+57057537 MS.gene26134:CDS
TTTAGTCAATGAAATGCATT+AGG 0.371280 5.4:+57062795 MS.gene26134:CDS
CCAAAAGAACAAAGAAGAAA+TGG 0.374118 5.4:+57062625 MS.gene26134:CDS
AGAATCTGATCTTGCTTTGA+AGG 0.374486 5.4:+57061016 MS.gene26134:CDS
AAAATTTACCGCAGAGCAAT+AGG 0.375503 5.4:-57056150 None:intergenic
TATTATGGATCAGATTATAT+AGG 0.375807 5.4:+57057344 MS.gene26134:CDS
ATCAAAGACTGAAAAGTTTA+GGG 0.382228 5.4:+57058605 MS.gene26134:CDS
TATCCATGTGTAGCCCTCTT+GGG 0.383791 5.4:-57057521 None:intergenic
CCTGTAATTTCTTGGGGAAA+AGG 0.384238 5.4:-57062437 None:intergenic
GTAATTTCACAGATAACTTT+GGG 0.384971 5.4:+57061441 MS.gene26134:intron
ATCTGAAGGATTAATCTTCA+TGG 0.398968 5.4:+57061679 MS.gene26134:CDS
ATTATGGATCAGATTATATA+GGG 0.408607 5.4:+57057345 MS.gene26134:CDS
CAGGGAAAAGAGTCTATTAG+AGG 0.414386 5.4:+57060951 MS.gene26134:intron
ATGAGGAATTCTTTCTTCCT+GGG 0.415335 5.4:+57060100 MS.gene26134:CDS
CTGTAATTTCTTGGGGAAAA+GGG 0.418226 5.4:-57062436 None:intergenic
CTCTTTATACTGGATATTGT+AGG 0.426388 5.4:+57056039 MS.gene26134:CDS
TTGGATCCCACGGATGGAAC+GGG 0.441874 5.4:-57062606 None:intergenic
AGCGGTTGCAAGAGGAGATT+CGG 0.443420 5.4:+57061574 MS.gene26134:CDS
ATATAATGATTACCTCTAGA+AGG 0.448474 5.4:-57060764 None:intergenic
GTCTATTAGAGGTAAGCAAT+TGG 0.450472 5.4:+57060962 MS.gene26134:CDS
TCAGACATCACATTCCATAT+TGG 0.453192 5.4:+57060987 MS.gene26134:CDS
CATCATAAAAGTATATATCT+AGG 0.453405 5.4:-57060722 None:intergenic
TCCAGTATAAAGAGATTCTC+TGG 0.454674 5.4:-57056030 None:intergenic
CTTTGATCCCTTGACTATCA+AGG 0.455450 5.4:-57058589 None:intergenic
CTTCTTTACTTGTTAGAGAA+GGG 0.459052 5.4:+57061510 MS.gene26134:CDS
TATATCTAGGATATTTGAAA+AGG 0.461969 5.4:-57060709 None:intergenic
GTTCTTGGTGCTTACTTGAT+CGG 0.463629 5.4:+57058555 MS.gene26134:CDS
GATATCCGTGAACAAATAAA+GGG 0.468529 5.4:+57058678 MS.gene26134:CDS
GAATAGAAATAAACTTCATA+AGG 0.468958 5.4:+57058656 MS.gene26134:CDS
TTCAGATGCAGCAACATGTA+GGG 0.482589 5.4:-57061663 None:intergenic
TTATGATGGAAGATCACCTT+TGG 0.485561 5.4:+57061118 MS.gene26134:CDS
TGCTGCATGCAGAGGATATG+AGG 0.486498 5.4:+57061295 MS.gene26134:CDS
AACCTTGTAGATGAGGTCCC+AGG 0.492365 5.4:-57056499 None:intergenic
ACACTTCTTCTTATTCATGA+AGG 0.493130 5.4:+57061323 MS.gene26134:CDS
CGTGGCCCTTTATTTGTTCA+CGG 0.497113 5.4:-57058683 None:intergenic
ACCTTAGATCGAATAGAAAT+GGG 0.498449 5.4:-57058759 None:intergenic
AAAACAGCAGCAGAACAGAT+AGG 0.501512 5.4:+57062688 MS.gene26134:CDS
GAAGTAGGCATAGCTGATGA+TGG 0.503447 5.4:+57060555 MS.gene26134:CDS
TATACATGCAGTAAATTTGA+GGG 0.506151 5.4:+57058494 MS.gene26134:CDS
CTACTTGAAGCAGTTAAGAA+TGG 0.507806 5.4:+57061473 MS.gene26134:CDS
CTAACAAGTTTGATTCGAGC+TGG 0.507916 5.4:+57061074 MS.gene26134:CDS
GCTTCTTTACTTGTTAGAGA+AGG 0.513509 5.4:+57061509 MS.gene26134:CDS
TTCTTTACTTGTTAGAGAAG+GGG 0.515946 5.4:+57061511 MS.gene26134:CDS
GTGTCAATTACATTATTGCT+CGG 0.517673 5.4:+57057413 MS.gene26134:CDS
CAGTGTTCCCGTTCCATCCG+TGG 0.517873 5.4:+57062599 MS.gene26134:CDS
ATATACATGCAGTAAATTTG+AGG 0.522845 5.4:+57058493 MS.gene26134:CDS
GCAAAGTTGTTATTAGAAGC+CGG 0.525156 5.4:+57061701 MS.gene26134:CDS
GTATAAAGAGATTCTCTGGC+AGG 0.526369 5.4:-57056026 None:intergenic
CTTCAGATGCAGCAACATGT+AGG 0.529295 5.4:-57061664 None:intergenic
TTCTTAACTGCTTCAAGTAG+CGG 0.531512 5.4:-57061470 None:intergenic
CAAGAGGGCTACACATGGAT+AGG 0.535896 5.4:+57057523 MS.gene26134:CDS
TCTTCTTGGATGTATGCCCT+GGG 0.537095 5.4:+57056482 MS.gene26134:CDS
ACCATCATCTATCCTAAAAG+AGG 0.538159 5.4:-57061534 None:intergenic
TTCGTGTTTGTGAACTGTGT+AGG 0.541275 5.4:+57060664 MS.gene26134:CDS
CTACATGTTGCTGCATCTGA+AGG 0.541279 5.4:+57061665 MS.gene26134:CDS
GTTTCAATGCAGGAGGAAGT+AGG 0.544137 5.4:+57060540 MS.gene26134:intron
TTTGGATCCCACGGATGGAA+CGG 0.544164 5.4:-57062607 None:intergenic
TCGTGTTTGTGAACTGTGTA+GGG 0.545827 5.4:+57060665 MS.gene26134:CDS
AGGATTGTTTATCAATCCGC+AGG 0.546342 5.4:-57060689 None:intergenic
TGTTGCATTATAACTTCCCC+AGG 0.548638 5.4:-57060117 None:intergenic
AGACTGAAAAGTTTAGGGAC+AGG 0.553258 5.4:+57058610 MS.gene26134:CDS
TGATAAAATACAAGAGTCAC+CGG 0.555115 5.4:-57062716 None:intergenic
TCACAAACACGAACAGTATG+TGG 0.557670 5.4:-57060654 None:intergenic
CTCATCCGAGCTTCATCAAG+CGG 0.561492 5.4:-57062353 None:intergenic
CTTGATGAAGCTCGGATGAG+TGG 0.563533 5.4:+57062356 MS.gene26134:CDS
GATTTATGTTTCATTTGACA+TGG 0.567202 5.4:+57058533 MS.gene26134:CDS
ACCTTGTAGATGAGGTCCCA+GGG 0.570005 5.4:-57056498 None:intergenic
TAGAAGTGCAACAGTTTCCT+CGG 0.570596 5.4:-57060580 None:intergenic
GGTGTAGACATCAACGTCAA+AGG 0.575460 5.4:+57061344 MS.gene26134:CDS
AGTGTTCCCGTTCCATCCGT+GGG 0.575764 5.4:+57062600 MS.gene26134:CDS
AGCTAAATAGTAGAATATGC+AGG 0.576332 5.4:-57057482 None:intergenic
ATACTCCGCTTGATGAAGCT+CGG 0.576832 5.4:+57062348 MS.gene26134:CDS
ACAGGCTTGTGGACGGAGAG+AGG 0.578778 5.4:+57057309 MS.gene26134:intron
GCCCTGGGACCTCATCTACA+AGG 0.578995 5.4:+57056497 MS.gene26134:CDS
ACACGAACAGTATGTGGCTG+AGG 0.585190 5.4:-57060648 None:intergenic
TTATGCTCAGCGGTTGCAAG+AGG 0.591981 5.4:+57061566 MS.gene26134:CDS
CATGACAGCCTTGATAGTCA+AGG 0.595353 5.4:+57058581 MS.gene26134:CDS
GAAGTAGAACCTTGTAGATG+AGG 0.595885 5.4:-57056506 None:intergenic
AAGTAGGCATAGCTGATGAT+GGG 0.598659 5.4:+57060556 MS.gene26134:CDS
TGAGGAATTCTTTCTTCCTG+GGG 0.600005 5.4:+57060101 MS.gene26134:CDS
ATTAGCTCTTGAATGGTGTG+TGG 0.609110 5.4:-57062664 None:intergenic
CAGGAAGAAAGAATTCCTCA+TGG 0.613827 5.4:-57060098 None:intergenic
ACGATTGCAAACCATGCGAT+AGG 0.616336 5.4:-57056124 None:intergenic
ATGACAGCCTTGATAGTCAA+GGG 0.617477 5.4:+57058582 MS.gene26134:CDS
CAGATGCAGCAACATGTAGG+GGG 0.623515 5.4:-57061661 None:intergenic
AATCCCAAGAGGGCTACACA+TGG 0.627575 5.4:+57057518 MS.gene26134:CDS
TTTATGAACAGGCTTGTGGA+CGG 0.628660 5.4:+57057302 MS.gene26134:intron
TCAGTACCTGTAATTTCTTG+GGG 0.633503 5.4:-57062443 None:intergenic
TTTCAAACTGCAAACGCACG+TGG 0.634475 5.4:-57058701 None:intergenic
GTGAACTGTGTAGGGTCCTG+CGG 0.635006 5.4:+57060673 MS.gene26134:CDS
TAGAAATGGGAATATCCTGA+AGG 0.635657 5.4:-57058746 None:intergenic
TAGCATCTTGCTGCATGCAG+AGG 0.635817 5.4:+57061287 MS.gene26134:intron
ATTGTTACTATGGCTACTGT+CGG 0.635977 5.4:+57057631 MS.gene26134:CDS
TGGATAGGAAGTTTGAAACT+GGG 0.641324 5.4:+57057538 MS.gene26134:CDS
TCAGATGCAGCAACATGTAG+GGG 0.646383 5.4:-57061662 None:intergenic
AGTATTAGACAACCTTCTAG+AGG 0.656465 5.4:+57060752 MS.gene26134:CDS
TCCAAGAAGATCAATGACAA+AGG 0.659708 5.4:-57056469 None:intergenic
AGACAGTCAGACCTATCGCA+TGG 0.660632 5.4:+57056113 MS.gene26134:CDS
CATAGCTGATGATGGGTCCG+AGG 0.664496 5.4:+57060563 MS.gene26134:CDS
GTGGACGGAGAGAGGAAGTG+AGG 0.671596 5.4:+57057317 MS.gene26134:CDS
ACACTACCTGAATCCCAAGA+GGG 0.677718 5.4:+57057508 MS.gene26134:CDS
TCAGGTTACTAGGCTCCATG+AGG 0.679390 5.4:+57060083 MS.gene26134:intron
TACACTACCTGAATCCCAAG+AGG 0.684427 5.4:+57057507 MS.gene26134:CDS
AGATGCAGCAACATGTAGGG+GGG 0.701313 5.4:-57061660 None:intergenic
ATCGTACTCCTATTGCTCTG+CGG 0.702881 5.4:+57056142 MS.gene26134:CDS
GGGGAAGTTATAATGCAACA+AGG 0.706358 5.4:+57060120 MS.gene26134:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGAAAAGATAAAAAGA+AGG - chr5.4:57062482-57062501 None:intergenic 15.0%
!! AAGTTAAAGAAAAAGTAAAA+TGG - chr5.4:57056733-57056752 None:intergenic 15.0%
!! AGTTAAAGAAAAAGTAAAAT+GGG - chr5.4:57056732-57056751 None:intergenic 15.0%
!! ATATATATAGAATATGCTAT+AGG + chr5.4:57062253-57062272 MS.gene26134:intron 15.0%
!! ATTTAAATATGTTTGTTTGT+AGG + chr5.4:57059605-57059624 MS.gene26134:intron 15.0%
!! TTTAACATCTATATAAAGTT+AGG + chr5.4:57056795-57056814 MS.gene26134:intron 15.0%
!!! AAAAAAAAAACGATAAGTTT+TGG - chr5.4:57062303-57062322 None:intergenic 15.0%
!!! ACACAATATAATTTTTATGA+TGG + chr5.4:57056290-57056309 MS.gene26134:intron 15.0%
!!! ATTAGTATTATCTATACTTT+TGG + chr5.4:57059273-57059292 MS.gene26134:intron 15.0%
!!! ATTGTTTTTCATTTGATTTA+TGG + chr5.4:57056410-57056429 MS.gene26134:intron 15.0%
!!! TAGATATATACTTTTATGAT+GGG + chr5.4:57060724-57060743 MS.gene26134:CDS 15.0%
!! ATATTTGATATATGCTGAAA+TGG + chr5.4:57056367-57056386 MS.gene26134:intron 20.0%
!! ATTATGGATCAGATTATATA+GGG + chr5.4:57057345-57057364 MS.gene26134:CDS 20.0%
!! ATTTCATATTTCACCTATAA+CGG - chr5.4:57062178-57062197 None:intergenic 20.0%
!! GAATAGAAATAAACTTCATA+AGG + chr5.4:57058656-57058675 MS.gene26134:CDS 20.0%
!! GTTAAAGAAAAAGTAAAATG+GGG - chr5.4:57056731-57056750 None:intergenic 20.0%
!! TAAACTATATTTGTGACTAT+AGG - chr5.4:57056920-57056939 None:intergenic 20.0%
!! TAAATCATCATAATACAACT+TGG - chr5.4:57058012-57058031 None:intergenic 20.0%
!! TATATAATCTGATCCATAAT+AGG - chr5.4:57057345-57057364 None:intergenic 20.0%
!! TATCTGAAAAAAATGATAGA+TGG - chr5.4:57062558-57062577 None:intergenic 20.0%
!! TATTATGGATCAGATTATAT+AGG + chr5.4:57057344-57057363 MS.gene26134:CDS 20.0%
!! TATTTGATATATGCTGAAAT+GGG + chr5.4:57056368-57056387 MS.gene26134:intron 20.0%
!! TGATAAGATAGTATACAATT+TGG - chr5.4:57058409-57058428 None:intergenic 20.0%
!! TTATCAAGAAATACAACATA+AGG - chr5.4:57056178-57056197 None:intergenic 20.0%
!! TTGTAGAAAGTAAAACAAAT+AGG - chr5.4:57058853-57058872 None:intergenic 20.0%
!!! ATAATGATTTTCATTTTGTC+TGG + chr5.4:57057698-57057717 MS.gene26134:intron 20.0%
!!! ATCTAAAACCTTAAAACTAA+GGG + chr5.4:57059335-57059354 MS.gene26134:intron 20.0%
!!! CATCATAAAAGTATATATCT+AGG - chr5.4:57060725-57060744 None:intergenic 20.0%
!!! CTAATATCTCATATTTTACA+GGG + chr5.4:57060933-57060952 MS.gene26134:intron 20.0%
!!! CTAGATATATACTTTTATGA+TGG + chr5.4:57060723-57060742 MS.gene26134:CDS 20.0%
!!! TATATCTAGGATATTTGAAA+AGG - chr5.4:57060712-57060731 None:intergenic 20.0%
!!! TATTTTGTTATTTAGACTCA+AGG + chr5.4:57059396-57059415 MS.gene26134:intron 20.0%
!!! TCATTTTTGAAACAATGTTT+AGG - chr5.4:57056607-57056626 None:intergenic 20.0%
!!! TTCAGGTGAAAATTTAAAAT+TGG + chr5.4:57061829-57061848 MS.gene26134:intron 20.0%
! AAACAACAAAGGTTCTTATT+AGG - chr5.4:57061261-57061280 None:intergenic 25.0%
! AAACAGATTTAGTGAACATT+TGG + chr5.4:57057969-57057988 MS.gene26134:intron 25.0%
! AAAGAAAATTCAGCATTATC+CGG - chr5.4:57060334-57060353 None:intergenic 25.0%
! AATATCAGAAACCTGAAATA+TGG - chr5.4:57060243-57060262 None:intergenic 25.0%
! ACTAGCATAGATAAAATTAG+AGG + chr5.4:57057787-57057806 MS.gene26134:intron 25.0%
! AGGATCATAGTAAATTATAG+AGG - chr5.4:57056587-57056606 None:intergenic 25.0%
! AGTTCAGAGAAATTGATATT+TGG + chr5.4:57057578-57057597 MS.gene26134:CDS 25.0%
! ATATAATGATTACCTCTAGA+AGG - chr5.4:57060767-57060786 None:intergenic 25.0%
! ATATACATGCAGTAAATTTG+AGG + chr5.4:57058493-57058512 MS.gene26134:CDS 25.0%
! ATATCAGAAACCTGAAATAT+GGG - chr5.4:57060242-57060261 None:intergenic 25.0%
! ATATGTCTAAGTTCTACAAT+TGG - chr5.4:57057832-57057851 None:intergenic 25.0%
! ATCAAAGACTGAAAAGTTTA+GGG + chr5.4:57058605-57058624 MS.gene26134:CDS 25.0%
! ATGCATAATTATATACTGAG+TGG - chr5.4:57059761-57059780 None:intergenic 25.0%
! ATGGTAGATACTCTATTAAA+GGG - chr5.4:57060808-57060827 None:intergenic 25.0%
! ATGTCAACTATTAGAATTAG+AGG + chr5.4:57056696-57056715 MS.gene26134:intron 25.0%
! ATTACTAATGTTTCCAAGAA+GGG + chr5.4:57061787-57061806 MS.gene26134:intron 25.0%
! CCTGTAAAATATGAGATATT+AGG - chr5.4:57060935-57060954 None:intergenic 25.0%
! CTAGCATAGATAAAATTAGA+GGG + chr5.4:57057788-57057807 MS.gene26134:intron 25.0%
! GAAAATTCATCTTTGTTCTT+TGG + chr5.4:57059019-57059038 MS.gene26134:intron 25.0%
! GAAGAAATGGAATAGTATTA+TGG + chr5.4:57062638-57062657 MS.gene26134:CDS 25.0%
! GATTTATGTTTCATTTGACA+TGG + chr5.4:57058533-57058552 MS.gene26134:CDS 25.0%
! GCTTTCAGTATTTAAATAGA+TGG + chr5.4:57057762-57057781 MS.gene26134:intron 25.0%
! GTAATTTCACAGATAACTTT+GGG + chr5.4:57061441-57061460 MS.gene26134:intron 25.0%
! GTAGAAAACAATAAATCCAA+TGG - chr5.4:57059494-57059513 None:intergenic 25.0%
! GTTATAGGTGAAATATGAAA+TGG + chr5.4:57062177-57062196 MS.gene26134:intron 25.0%
! GTTCACTAAATCTGTTTAAA+TGG - chr5.4:57057966-57057985 None:intergenic 25.0%
! TAAAAATCTGATAAAGCTAC+TGG + chr5.4:57062382-57062401 MS.gene26134:CDS 25.0%
! TAGACATATCTTTAATGTGA+TGG + chr5.4:57057843-57057862 MS.gene26134:intron 25.0%
! TAGCATAGATAAAATTAGAG+GGG + chr5.4:57057789-57057808 MS.gene26134:intron 25.0%
! TATACATGCAGTAAATTTGA+GGG + chr5.4:57058494-57058513 MS.gene26134:CDS 25.0%
! TATAGTCTGAAGAAAATTGT+TGG + chr5.4:57057935-57057954 MS.gene26134:intron 25.0%
! TATCAGCTATACAACAATAA+CGG - chr5.4:57056350-57056369 None:intergenic 25.0%
! TGGATTGATAAAAAAGAACT+TGG + chr5.4:57059929-57059948 MS.gene26134:intron 25.0%
! TTATCCTTGAAAGAATTCAA+GGG + chr5.4:57059539-57059558 MS.gene26134:intron 25.0%
! TTCTTCATAATATCTTCCAT+AGG + chr5.4:57060414-57060433 MS.gene26134:intron 25.0%
! TTGAAAGAAACTCTGAATAA+AGG + chr5.4:57057906-57057925 MS.gene26134:intron 25.0%
! TTTATCCTTGAAAGAATTCA+AGG + chr5.4:57059538-57059557 MS.gene26134:intron 25.0%
! TTTATGTTCTTTCATCTTTC+AGG + chr5.4:57060065-57060084 MS.gene26134:intron 25.0%
!! AAAAAAGAACTTGGTAGTAT+GGG + chr5.4:57059938-57059957 MS.gene26134:intron 25.0%
!! AAATTCTGCCTTTTAATAAC+AGG - chr5.4:57057084-57057103 None:intergenic 25.0%
!! AGTATTATCTATACTTTTGG+TGG + chr5.4:57059276-57059295 MS.gene26134:intron 25.0%
!! ATGTACTAAGTTACTCATTT+TGG + chr5.4:57060873-57060892 MS.gene26134:intron 25.0%
!! CCTAATATCTCATATTTTAC+AGG + chr5.4:57060932-57060951 MS.gene26134:intron 25.0%
!! CTTAAAAGGCTTTTATCTTA+TGG + chr5.4:57061602-57061621 MS.gene26134:CDS 25.0%
!! GAAATGTATTCTGGAAATTT+AGG - chr5.4:57056543-57056562 None:intergenic 25.0%
!! GAGGATCAAACTTAAATTTT+AGG + chr5.4:57061396-57061415 MS.gene26134:intron 25.0%
!! GATCTAAAACCTTAAAACTA+AGG + chr5.4:57059334-57059353 MS.gene26134:intron 25.0%
!! TAAAAAAGAACTTGGTAGTA+TGG + chr5.4:57059937-57059956 MS.gene26134:intron 25.0%
!! TCTAAAACCTTAAAACTAAG+GGG + chr5.4:57059336-57059355 MS.gene26134:intron 25.0%
!! TGTCATTTCATACTGATATA+TGG - chr5.4:57059254-57059273 None:intergenic 25.0%
!! TTCTCATAAACACTTTTACA+AGG - chr5.4:57060368-57060387 None:intergenic 25.0%
!! TTTATAACAGCATTTGTTAG+TGG - chr5.4:57061231-57061250 None:intergenic 25.0%
!!! AAAAACGATAAGTTTTGGAA+TGG - chr5.4:57062298-57062317 None:intergenic 25.0%
!!! ACTTTTTCTTTAACTTTCCA+TGG + chr5.4:57056737-57056756 MS.gene26134:intron 25.0%
!!! GTATTTTGCTATTGTTACTA+TGG + chr5.4:57057621-57057640 MS.gene26134:CDS 25.0%
AAATAGTTGGTCAATTGAAC+TGG - chr5.4:57056833-57056852 None:intergenic 30.0%
AACAATAAATCCAATGGACA+AGG - chr5.4:57059488-57059507 None:intergenic 30.0%
AACATATAGAGATGAAACGT+AGG - chr5.4:57058971-57058990 None:intergenic 30.0%
AAGGTAATAAGAGAAAGAAG+AGG + chr5.4:57058777-57058796 MS.gene26134:intron 30.0%
ACAACCATAAATGATGCTAA+AGG - chr5.4:57058804-57058823 None:intergenic 30.0%
ACAATAAATCCAATGGACAA+GGG - chr5.4:57059487-57059506 None:intergenic 30.0%
ACACTTCTTCTTATTCATGA+AGG + chr5.4:57061323-57061342 MS.gene26134:CDS 30.0%
ACAGACTATCAACAAATAGT+TGG - chr5.4:57056846-57056865 None:intergenic 30.0%
ACATATAGAGATGAAACGTA+GGG - chr5.4:57058970-57058989 None:intergenic 30.0%
ACCTGAAAACAAGTATGAAA+AGG - chr5.4:57061816-57061835 None:intergenic 30.0%
ACCTTAGATCGAATAGAAAT+GGG - chr5.4:57058762-57058781 None:intergenic 30.0%
AGCTAAATAGTAGAATATGC+AGG - chr5.4:57057485-57057504 None:intergenic 30.0%
ATACCTACAGAAAAGAAACA+AGG - chr5.4:57056439-57056458 None:intergenic 30.0%
ATCAGTACCTGTAATTTCTT+GGG - chr5.4:57062447-57062466 None:intergenic 30.0%
ATCTGAAGGATTAATCTTCA+TGG + chr5.4:57061679-57061698 MS.gene26134:CDS 30.0%
ATTTCATACTGATATATGGC+AGG - chr5.4:57059250-57059269 None:intergenic 30.0%
CATGGTAGATACTCTATTAA+AGG - chr5.4:57060809-57060828 None:intergenic 30.0%
CATTACTAATGTTTCCAAGA+AGG + chr5.4:57061786-57061805 MS.gene26134:intron 30.0%
CCAAAAGAACAAAGAAGAAA+TGG + chr5.4:57062625-57062644 MS.gene26134:CDS 30.0%
CCTATTAAACCGACATTATA+AGG - chr5.4:57056261-57056280 None:intergenic 30.0%
CGTAATTTCACAGATAACTT+TGG + chr5.4:57061440-57061459 MS.gene26134:intron 30.0%
CTCTTTATACTGGATATTGT+AGG + chr5.4:57056039-57056058 MS.gene26134:CDS 30.0%
CTGTCACAATACTTTATGTT+GGG + chr5.4:57056862-57056881 MS.gene26134:intron 30.0%
GAAATTGAAAAATAGCGAAG+TGG - chr5.4:57060211-57060230 None:intergenic 30.0%
GAACAAATATCAACAAGCAT+TGG - chr5.4:57058898-57058917 None:intergenic 30.0%
GAATCGATGCAAATAATACA+TGG - chr5.4:57058366-57058385 None:intergenic 30.0%
GACAGTAATTTCATAACAGA+TGG - chr5.4:57058206-57058225 None:intergenic 30.0%
GAGATTCGGATTATCTTAAA+AGG + chr5.4:57061588-57061607 MS.gene26134:CDS 30.0%
GATATCCGTGAACAAATAAA+GGG + chr5.4:57058678-57058697 MS.gene26134:CDS 30.0%
GATCAAAGACTGAAAAGTTT+AGG + chr5.4:57058604-57058623 MS.gene26134:CDS 30.0%
GCACAAGTTAAGATTAATGT+TGG + chr5.4:57057142-57057161 MS.gene26134:intron 30.0%
GTATACTATCTTATCACTCT+TGG + chr5.4:57058413-57058432 MS.gene26134:intron 30.0%
GTGTCAATTACATTATTGCT+CGG + chr5.4:57057413-57057432 MS.gene26134:CDS 30.0%
GTTGTTGTCGTATGATTTAT+AGG - chr5.4:57061957-57061976 None:intergenic 30.0%
TACCTTAGATCGAATAGAAA+TGG - chr5.4:57058763-57058782 None:intergenic 30.0%
TAGAAACTCTCGTTAAACAA+AGG - chr5.4:57059998-57060017 None:intergenic 30.0%
TATCAGTACCTGTAATTTCT+TGG - chr5.4:57062448-57062467 None:intergenic 30.0%
TATCTCTCACCTTATAATGT+CGG + chr5.4:57056249-57056268 MS.gene26134:intron 30.0%
TATTGACGTTAGCATGATTA+AGG + chr5.4:57062756-57062775 MS.gene26134:CDS 30.0%
TCTGTCACAATACTTTATGT+TGG + chr5.4:57056861-57056880 MS.gene26134:intron 30.0%
TGATAAAATACAAGAGTCAC+CGG - chr5.4:57062719-57062738 None:intergenic 30.0%
TGCTATACGAAAAACAACAA+AGG - chr5.4:57061272-57061291 None:intergenic 30.0%
TGTCACAATACTTTATGTTG+GGG + chr5.4:57056863-57056882 MS.gene26134:intron 30.0%
TTACTAATGTTTCCAAGAAG+GGG + chr5.4:57061788-57061807 MS.gene26134:intron 30.0%
TTACTTTCAAGGTTGAACTT+TGG + chr5.4:57059909-57059928 MS.gene26134:intron 30.0%
TTCAACCTTGAAAGTAAAAG+TGG - chr5.4:57059906-57059925 None:intergenic 30.0%
TTTGTTGAGTAACAAGTGTT+TGG - chr5.4:57059673-57059692 None:intergenic 30.0%
! AAAAACGTTCCTCTTTTTAG+TGG + chr5.4:57059174-57059193 MS.gene26134:CDS 30.0%
! AAATTTAAGTTTGATCCTCG+AGG - chr5.4:57061395-57061414 None:intergenic 30.0%
! AAGGCTTTTATCTTATGGAA+TGG + chr5.4:57061607-57061626 MS.gene26134:CDS 30.0%
! ACATTGATCTTTTCGTCAAT+CGG + chr5.4:57059438-57059457 MS.gene26134:intron 30.0%
! CAACTATATTTTGTCTGTGA+TGG + chr5.4:57060156-57060175 MS.gene26134:CDS 30.0%
! CATAATGCATTTTGAACTCA+TGG - chr5.4:57060827-57060846 None:intergenic 30.0%
! CCATCATAATCTGTCTTTTT+GGG - chr5.4:57061107-57061126 None:intergenic 30.0%
! CCATTTCTTCTTTGTTCTTT+TGG - chr5.4:57062628-57062647 None:intergenic 30.0%
! CTGACTTTTTGCAAATCAAA+CGG - chr5.4:57059566-57059585 None:intergenic 30.0%
! CTTCTTTACTTGTTAGAGAA+GGG + chr5.4:57061510-57061529 MS.gene26134:CDS 30.0%
! TCCATCATAATCTGTCTTTT+TGG - chr5.4:57061108-57061127 None:intergenic 30.0%
! TCTATGTTTTCCCATATTTC+AGG + chr5.4:57060229-57060248 MS.gene26134:intron 30.0%
! TGTATTTTATCAGAAGATGC+TGG + chr5.4:57062727-57062746 MS.gene26134:CDS 30.0%
! TTCTTTACTTGTTAGAGAAG+GGG + chr5.4:57061511-57061530 MS.gene26134:CDS 30.0%
! TTCTTTTCTTTCACAGGATA+TGG + chr5.4:57058468-57058487 MS.gene26134:intron 30.0%
! TTGGGGTGATAGAAATTTTT+GGG + chr5.4:57056880-57056899 MS.gene26134:intron 30.0%
! TTTGTTCTCAATTTGTTCAC+TGG + chr5.4:57058911-57058930 MS.gene26134:intron 30.0%
!! ACCTTTTCATACTTGTTTTC+AGG + chr5.4:57061812-57061831 MS.gene26134:intron 30.0%
!! CCTTATAATGTCGGTTTAAT+AGG + chr5.4:57056258-57056277 MS.gene26134:intron 30.0%
!! CTTGATTTGCTATCATATAC+TGG + chr5.4:57062048-57062067 MS.gene26134:intron 30.0%
!! GTTTGATTTGCAAAAAGTCA+GGG + chr5.4:57059565-57059584 MS.gene26134:intron 30.0%
!! TTCCTCTACTCTTTTTGTTT+GGG + chr5.4:57057877-57057896 MS.gene26134:intron 30.0%
!!! TGTGCAATTTTTCAGGAATT+TGG + chr5.4:57057378-57057397 MS.gene26134:CDS 30.0%
!!! TGTTTTGATTAGCTCTTGAA+TGG - chr5.4:57062674-57062693 None:intergenic 30.0%
AAAACCAGAAGTCATGACAA+AGG - chr5.4:57057233-57057252 None:intergenic 35.0%
AAAATTTACCGCAGAGCAAT+AGG - chr5.4:57056153-57056172 None:intergenic 35.0%
AAACCAGAAGTCATGACAAA+GGG - chr5.4:57057232-57057251 None:intergenic 35.0%
AAAGGTTAACCTCAATGAAC+TGG - chr5.4:57057284-57057303 None:intergenic 35.0%
AAATGCATTATGCTACTCTC+CGG + chr5.4:57060835-57060854 MS.gene26134:intron 35.0%
ACCATCATCTATCCTAAAAG+AGG - chr5.4:57061537-57061556 None:intergenic 35.0%
ACCTATATAGATATTCCTCG+AGG + chr5.4:57061377-57061396 MS.gene26134:intron 35.0%
ACCTTTGTCATTGATCTTCT+TGG + chr5.4:57056468-57056487 MS.gene26134:CDS 35.0%
ACTCAACAAACTGTAGGAAT+AGG + chr5.4:57059683-57059702 MS.gene26134:intron 35.0%
ACTGATATATGGCAGGAAAT+GGG - chr5.4:57059243-57059262 None:intergenic 35.0%
ACTTTCCATGGAAATTTCAC+TGG + chr5.4:57056749-57056768 MS.gene26134:intron 35.0%
AGAATCTGATCTTGCTTTGA+AGG + chr5.4:57061016-57061035 MS.gene26134:CDS 35.0%
AGGTCCTTTAGCATCATTTA+TGG + chr5.4:57058797-57058816 MS.gene26134:intron 35.0%
AGTATTAGACAACCTTCTAG+AGG + chr5.4:57060752-57060771 MS.gene26134:CDS 35.0%
ATGAGGAATTCTTTCTTCCT+GGG + chr5.4:57060100-57060119 MS.gene26134:CDS 35.0%
ATTGTTACTATGGCTACTGT+CGG + chr5.4:57057631-57057650 MS.gene26134:CDS 35.0%
CAGAATACATTTCTCACTTG+AGG + chr5.4:57056550-57056569 MS.gene26134:intron 35.0%
CATAGTCTATCCAAGATCTA+TGG + chr5.4:57056316-57056335 MS.gene26134:intron 35.0%
CCCAAAAAGACAGATTATGA+TGG + chr5.4:57061104-57061123 MS.gene26134:CDS 35.0%
CTACTTGAAGCAGTTAAGAA+TGG + chr5.4:57061473-57061492 MS.gene26134:CDS 35.0%
CTCAAGTGAGAAATGTATTC+TGG - chr5.4:57056552-57056571 None:intergenic 35.0%
CTGTAATTTCTTGGGGAAAA+GGG - chr5.4:57062439-57062458 None:intergenic 35.0%
CTGTTATGAAATTACTGTCC+TGG + chr5.4:57058207-57058226 MS.gene26134:intron 35.0%
CTTAGCTAAATAAATTGCGC+AGG - chr5.4:57057123-57057142 None:intergenic 35.0%
CTTGTTACTCAACAAACTGT+AGG + chr5.4:57059677-57059696 MS.gene26134:intron 35.0%
CTTTCCATGGAAATTTCACT+GGG + chr5.4:57056750-57056769 MS.gene26134:intron 35.0%
GCATCATTTATGGTTGTCTA+TGG + chr5.4:57058807-57058826 MS.gene26134:intron 35.0%
GCATGAATCGGGTAATAAAA+GGG - chr5.4:57060312-57060331 None:intergenic 35.0%
GGATATCCGTGAACAAATAA+AGG + chr5.4:57058677-57058696 MS.gene26134:CDS 35.0%
GTCTATTAGAGGTAAGCAAT+TGG + chr5.4:57060962-57060981 MS.gene26134:CDS 35.0%
GTTGACATTTCATTGCAAAC+TGG - chr5.4:57056684-57056703 None:intergenic 35.0%
GTTTCATTTGACATGGTTCT+TGG + chr5.4:57058540-57058559 MS.gene26134:CDS 35.0%
TAATCCCAGTGAAATTTCCA+TGG - chr5.4:57056757-57056776 None:intergenic 35.0%
TACATGGATCTACATAGAAG+CGG - chr5.4:57058350-57058369 None:intergenic 35.0%
TACTGATATATGGCAGGAAA+TGG - chr5.4:57059244-57059263 None:intergenic 35.0%
TAGAAATGGGAATATCCTGA+AGG - chr5.4:57058749-57058768 None:intergenic 35.0%
TCAATTACAGTACCTGTCTT+TGG - chr5.4:57061741-57061760 None:intergenic 35.0%
TCAGACATCACATTCCATAT+TGG + chr5.4:57060987-57061006 MS.gene26134:CDS 35.0%
TCAGTACCTGTAATTTCTTG+GGG - chr5.4:57062446-57062465 None:intergenic 35.0%
TCATTTCACGCAAAACAGAT+GGG + chr5.4:57062322-57062341 MS.gene26134:intron 35.0%
TCCAAAACAGAACATCAACA+TGG + chr5.4:57062080-57062099 MS.gene26134:intron 35.0%
TCCAAGAAGATCAATGACAA+AGG - chr5.4:57056472-57056491 None:intergenic 35.0%
TCCAGTATAAAGAGATTCTC+TGG - chr5.4:57056033-57056052 None:intergenic 35.0%
TCCCATTTCTATTCGATCTA+AGG + chr5.4:57058758-57058777 MS.gene26134:CDS 35.0%
TCCTCGAGGAATATCTATAT+AGG - chr5.4:57061381-57061400 None:intergenic 35.0%
TCTCACTTGAGGAATTGTAT+TGG + chr5.4:57056561-57056580 MS.gene26134:intron 35.0%
TGAAAGTTTCCAGTTCATTG+AGG + chr5.4:57057272-57057291 MS.gene26134:intron 35.0%
TGGAAAATGTGAACAGAAGA+TGG - chr5.4:57059071-57059090 None:intergenic 35.0%
TTATTCAGCATGCAGAAAAG+AGG - chr5.4:57059964-57059983 None:intergenic 35.0%
TTCATTTCACGCAAAACAGA+TGG + chr5.4:57062321-57062340 MS.gene26134:intron 35.0%
TTCCCAAACAAAAAGAGTAG+AGG - chr5.4:57057882-57057901 None:intergenic 35.0%
TTCTTAACTGCTTCAAGTAG+CGG - chr5.4:57061473-57061492 None:intergenic 35.0%
TTGCGAAGCCTGTTATTAAA+AGG + chr5.4:57057073-57057092 MS.gene26134:intron 35.0%
TTTGCAAAAAGTCAGGGTAA+TGG + chr5.4:57059571-57059590 MS.gene26134:intron 35.0%
TTTGGTAAAAACACTAGCTC+CGG - chr5.4:57061723-57061742 None:intergenic 35.0%
! AACTGTAGGAATAGGAGTAT+AGG + chr5.4:57059691-57059710 MS.gene26134:intron 35.0%
! ACCATGTTGATGTTCTGTTT+TGG - chr5.4:57062084-57062103 None:intergenic 35.0%
! AGAGAGTTGTGCAATTTTTC+AGG + chr5.4:57057371-57057390 MS.gene26134:CDS 35.0%
! AGAGGAACGTTTTTGATGTA+TGG - chr5.4:57059168-57059187 None:intergenic 35.0%
! AGCCAAGTATTTTGTAACCA+GGG - chr5.4:57062228-57062247 None:intergenic 35.0%
! AGGACAAATAGCTTTTCTTG+TGG + chr5.4:57056059-57056078 MS.gene26134:CDS 35.0%
! ATCTTTTCGTCAATCGGAAA+TGG + chr5.4:57059444-57059463 MS.gene26134:intron 35.0%
! ATGGATAGGAAGTTTGAAAC+TGG + chr5.4:57057537-57057556 MS.gene26134:CDS 35.0%
! ATTCTAGAAAACAGTAGCGT+CGG - chr5.4:57061929-57061948 None:intergenic 35.0%
! CAAATTTCTGCTGGAGTTTT+AGG + chr5.4:57059045-57059064 MS.gene26134:intron 35.0%
! CTTCCTCTACTCTTTTTGTT+TGG + chr5.4:57057876-57057895 MS.gene26134:intron 35.0%
! GAGGTTAACCTTTTATGAAC+AGG + chr5.4:57057291-57057310 MS.gene26134:intron 35.0%
! GATAAAATTAGAGGGGTATG+CGG + chr5.4:57057796-57057815 MS.gene26134:intron 35.0%
! GCAAAGTTGTTATTAGAAGC+CGG + chr5.4:57061701-57061720 MS.gene26134:CDS 35.0%
! GCAACTTTCTTTTCTTTCAC+AGG + chr5.4:57058462-57058481 MS.gene26134:intron 35.0%
! GCTTCTTTACTTGTTAGAGA+AGG + chr5.4:57061509-57061528 MS.gene26134:CDS 35.0%
! GTCAATAGAACAGCTTTTGA+TGG + chr5.4:57061038-57061057 MS.gene26134:CDS 35.0%
! GTTAAGATTAATGTTGGCTG+TGG + chr5.4:57057148-57057167 MS.gene26134:intron 35.0%
! GTTGGGGTGATAGAAATTTT+TGG + chr5.4:57056879-57056898 MS.gene26134:intron 35.0%
! TCCTGCATTGAAACAGTTTT+GGG - chr5.4:57060534-57060553 None:intergenic 35.0%
! TGGATAGGAAGTTTGAAACT+GGG + chr5.4:57057538-57057557 MS.gene26134:CDS 35.0%
! TTATGATGGAAGATCACCTT+TGG + chr5.4:57061118-57061137 MS.gene26134:CDS 35.0%
! TTTTATTACCCGATTCATGC+CGG + chr5.4:57060312-57060331 MS.gene26134:intron 35.0%
! TTTTGTAACCAGGGGAAAAA+TGG - chr5.4:57062219-57062238 None:intergenic 35.0%
!! CAGATTCTAGCTTTCCAATA+TGG - chr5.4:57061004-57061023 None:intergenic 35.0%
!! CGTTTGATTTGCAAAAAGTC+AGG + chr5.4:57059564-57059583 MS.gene26134:intron 35.0%
!! CTAGTGTTTTTACCAAAGAC+AGG + chr5.4:57061726-57061745 MS.gene26134:CDS 35.0%
!! CTATACAACAATAACGGATG+CGG - chr5.4:57056344-57056363 None:intergenic 35.0%
!! CTTCCTTGTTTCTTTTCTGT+AGG + chr5.4:57056433-57056452 MS.gene26134:intron 35.0%
!! CTTTCATCTTTCAGGTTACT+AGG + chr5.4:57060073-57060092 MS.gene26134:intron 35.0%
!! TAACAGATGGTGTTGTGATT+TGG - chr5.4:57058193-57058212 None:intergenic 35.0%
!! TATCAACAAGCATTGGAATC+AGG - chr5.4:57058891-57058910 None:intergenic 35.0%
!!! ACATTTTCCATGAAAGCATC+TGG + chr5.4:57059081-57059100 MS.gene26134:intron 35.0%
!!! ATGGAGTTTGGATTTTTTCG+TGG + chr5.4:57056003-57056022 MS.gene26134:CDS 35.0%
!!! CGATAAGTTTTGGAATGGAA+AGG - chr5.4:57062293-57062312 None:intergenic 35.0%
!!! TACTGCCACTTTTACTTTCA+AGG + chr5.4:57059898-57059917 MS.gene26134:intron 35.0%
!!! TCTTTTAGGATAGATGATGG+TGG + chr5.4:57061536-57061555 MS.gene26134:CDS 35.0%
!!! TGGTAGTTTTTTATGCTCAG+CGG + chr5.4:57061556-57061575 MS.gene26134:CDS 35.0%
!!! TGTTGATCCCCTTAGTTTTA+AGG - chr5.4:57059346-57059365 None:intergenic 35.0%
AAAACAGCAGCAGAACAGAT+AGG + chr5.4:57062688-57062707 MS.gene26134:CDS 40.0%
AACAGCTGTGTCATGAACTA+AGG - chr5.4:57058269-57058288 None:intergenic 40.0%
AACCTAGCACACTAGTGAAT+TGG - chr5.4:57061856-57061875 None:intergenic 40.0%
AACTGCTGTGAAAGAAGAAC+AGG - chr5.4:57056641-57056660 None:intergenic 40.0%
AAGTAGGCATAGCTGATGAT+GGG + chr5.4:57060556-57060575 MS.gene26134:CDS 40.0%
ACACGCGCAAGAAATGATAA+CGG - chr5.4:57060027-57060046 None:intergenic 40.0%
ACCTAGCACACTAGTGAATT+GGG - chr5.4:57061855-57061874 None:intergenic 40.0%
AGACTGAAAAGTTTAGGGAC+AGG + chr5.4:57058610-57058629 MS.gene26134:CDS 40.0%
AGGATTGTTTATCAATCCGC+AGG - chr5.4:57060692-57060711 None:intergenic 40.0%
AGTCATAGCTTCTGAGTAAC+TGG + chr5.4:57060263-57060282 MS.gene26134:intron 40.0%
AGTTTAACCCCTCATAGCAA+TGG + chr5.4:57056934-57056953 MS.gene26134:intron 40.0%
ATATAGCCAACTCCACTTAG+TGG - chr5.4:57061997-57062016 None:intergenic 40.0%
ATGAAATTACTGTCCTGGTG+TGG + chr5.4:57058212-57058231 MS.gene26134:intron 40.0%
ATGGAAGATCACCTTTGGTA+AGG + chr5.4:57061123-57061142 MS.gene26134:intron 40.0%
CAAAACTGTTTCAATGCAGG+AGG + chr5.4:57060533-57060552 MS.gene26134:intron 40.0%
CAAGACTTATGCTTACCAAG+TGG - chr5.4:57058051-57058070 None:intergenic 40.0%
CAGGAAGAAAGAATTCCTCA+TGG - chr5.4:57060101-57060120 None:intergenic 40.0%
CAGGGAAAAGAGTCTATTAG+AGG + chr5.4:57060951-57060970 MS.gene26134:intron 40.0%
CATGAGGAATTCTTTCTTCC+TGG + chr5.4:57060099-57060118 MS.gene26134:CDS 40.0%
CATTTCACGCAAAACAGATG+GGG + chr5.4:57062323-57062342 MS.gene26134:intron 40.0%
CCTGTAATTTCTTGGGGAAA+AGG - chr5.4:57062440-57062459 None:intergenic 40.0%
CTACAAACCAGATGCTTTCA+TGG - chr5.4:57059091-57059110 None:intergenic 40.0%
CTGATATATGGCAGGAAATG+GGG - chr5.4:57059242-57059261 None:intergenic 40.0%
CTTTGATCCCTTGACTATCA+AGG - chr5.4:57058592-57058611 None:intergenic 40.0%
GAAGTAGAACCTTGTAGATG+AGG - chr5.4:57056509-57056528 None:intergenic 40.0%
GCCAGAGAATCTCTTTATAC+TGG + chr5.4:57056029-57056048 MS.gene26134:CDS 40.0%
GGCATGAATCGGGTAATAAA+AGG - chr5.4:57060313-57060332 None:intergenic 40.0%
GGGGAAGTTATAATGCAACA+AGG + chr5.4:57060120-57060139 MS.gene26134:CDS 40.0%
GTATAAAGAGATTCTCTGGC+AGG - chr5.4:57056029-57056048 None:intergenic 40.0%
GTTTCCTCTTTGTTGACCTA+TGG - chr5.4:57060433-57060452 None:intergenic 40.0%
TATAGCCAACTCCACTTAGT+GGG - chr5.4:57061996-57062015 None:intergenic 40.0%
TATATGCTGAAATGGGATGC+TGG + chr5.4:57056375-57056394 MS.gene26134:intron 40.0%
TATGAAAAGGTTCCCCTTCT+TGG - chr5.4:57061803-57061822 None:intergenic 40.0%
TCACAAACACGAACAGTATG+TGG - chr5.4:57060657-57060676 None:intergenic 40.0%
TCCACAAGCCTGTTCATAAA+AGG - chr5.4:57057302-57057321 None:intergenic 40.0%
TCCCCTGGTTACAAAATACT+TGG + chr5.4:57062223-57062242 MS.gene26134:intron 40.0%
TCGTGTTTGTGAACTGTGTA+GGG + chr5.4:57060665-57060684 MS.gene26134:CDS 40.0%
TCTTCCATAGGTCAACAAAG+AGG + chr5.4:57060426-57060445 MS.gene26134:intron 40.0%
TCTTCTTTCACAGCAGTTCA+AGG + chr5.4:57056643-57056662 MS.gene26134:intron 40.0%
TGAGGAATTCTTTCTTCCTG+GGG + chr5.4:57060101-57060120 MS.gene26134:CDS 40.0%
TGTTGCATTATAACTTCCCC+AGG - chr5.4:57060120-57060139 None:intergenic 40.0%
TTATGCTTACCAAGTGGAGT+TGG - chr5.4:57058045-57058064 None:intergenic 40.0%
TTCAGATGCAGCAACATGTA+GGG - chr5.4:57061666-57061685 None:intergenic 40.0%
TTCGTGTTTGTGAACTGTGT+AGG + chr5.4:57060664-57060683 MS.gene26134:CDS 40.0%
TTTATGAACAGGCTTGTGGA+CGG + chr5.4:57057302-57057321 MS.gene26134:intron 40.0%
TTTGGTCTGTGTGAAAACAG+TGG - chr5.4:57058175-57058194 None:intergenic 40.0%
! ACCTTTTATGAACAGGCTTG+TGG + chr5.4:57057298-57057317 MS.gene26134:intron 40.0%
! AGGAAGTGAGGTACCTATTA+TGG + chr5.4:57057329-57057348 MS.gene26134:CDS 40.0%
! ATGACAGCCTTGATAGTCAA+GGG + chr5.4:57058582-57058601 MS.gene26134:CDS 40.0%
! ATTAGCTCTTGAATGGTGTG+TGG - chr5.4:57062667-57062686 None:intergenic 40.0%
! CAGCCAAGTATTTTGTAACC+AGG - chr5.4:57062229-57062248 None:intergenic 40.0%
! CATAGAAGCGGTTCTGATAA+CGG - chr5.4:57058338-57058357 None:intergenic 40.0%
! CCTTTTCCCCAAGAAATTAC+AGG + chr5.4:57062437-57062456 MS.gene26134:CDS 40.0%
! CTAACAAGTTTGATTCGAGC+TGG + chr5.4:57061074-57061093 MS.gene26134:CDS 40.0%
! CTCCTGCATTGAAACAGTTT+TGG - chr5.4:57060535-57060554 None:intergenic 40.0%
! CTTTGTTCTTTTGGATCCCA+CGG - chr5.4:57062619-57062638 None:intergenic 40.0%
! GCAGAACAGATAGGATTTTC+CGG + chr5.4:57062697-57062716 MS.gene26134:CDS 40.0%
! GCCAAGTATTTTGTAACCAG+GGG - chr5.4:57062227-57062246 None:intergenic 40.0%
! TAGAAGTGCAACAGTTTCCT+CGG - chr5.4:57060583-57060602 None:intergenic 40.0%
! TTCTAGAAAACAGTAGCGTC+GGG - chr5.4:57061928-57061947 None:intergenic 40.0%
! TTGTTGTGTTTCTGTTTCGC+TGG + chr5.4:57056976-57056995 MS.gene26134:intron 40.0%
! TTTGCTGCTGCAGTTTTTCT+AGG + chr5.4:57058295-57058314 MS.gene26134:intron 40.0%
!! ATACTTTTGGTGGCTAAAGC+TGG + chr5.4:57059286-57059305 MS.gene26134:intron 40.0%
!! CTATAACGGACAATCTTGGT+CGG - chr5.4:57062164-57062183 None:intergenic 40.0%
!! GAAGAGCATCCACTAAAAAG+AGG - chr5.4:57059186-57059205 None:intergenic 40.0%
!! GGAAGCTCTCTTTTGCTTTT+TGG + chr5.4:57059307-57059326 MS.gene26134:intron 40.0%
!! GTTCTTGGTGCTTACTTGAT+CGG + chr5.4:57058555-57058574 MS.gene26134:CDS 40.0%
!! TCACCTATAACGGACAATCT+TGG - chr5.4:57062168-57062187 None:intergenic 40.0%
!!! GCCTCTTTTAGGATAGATGA+TGG + chr5.4:57061533-57061552 MS.gene26134:CDS 40.0%
!!! TTGGCTGTGGTTTTGAAACA+TGG + chr5.4:57057161-57057180 MS.gene26134:intron 40.0%
AACCAGGGGAAAAATGGAGA+AGG - chr5.4:57062213-57062232 None:intergenic 45.0%
AAGCCCTTTGTCATGACTTC+TGG + chr5.4:57057226-57057245 MS.gene26134:intron 45.0%
ACACTACCTGAATCCCAAGA+GGG + chr5.4:57057508-57057527 MS.gene26134:CDS 45.0%
ACGATTGCAAACCATGCGAT+AGG - chr5.4:57056127-57056146 None:intergenic 45.0%
AGCATTATCCGGCATGAATC+GGG - chr5.4:57060323-57060342 None:intergenic 45.0%
ATACTCCGCTTGATGAAGCT+CGG + chr5.4:57062348-57062367 MS.gene26134:CDS 45.0%
ATCGTACTCCTATTGCTCTG+CGG + chr5.4:57056142-57056161 MS.gene26134:CDS 45.0%
ATCTTCTTGGATGTATGCCC+TGG + chr5.4:57056481-57056500 MS.gene26134:CDS 45.0%
CACATCGTAGATGAAGAGGA+TGG - chr5.4:57061191-57061210 None:intergenic 45.0%
CAGCATTATCCGGCATGAAT+CGG - chr5.4:57060324-57060343 None:intergenic 45.0%
CATCCTCTTCATCTACGATG+TGG + chr5.4:57061189-57061208 MS.gene26134:intron 45.0%
CCACTTAGTGGGATAAGACT+TGG - chr5.4:57061985-57062004 None:intergenic 45.0%
CGACCAAGATTGTCCGTTAT+AGG + chr5.4:57062162-57062181 MS.gene26134:intron 45.0%
CGGACCCTTGAATTCTTTCA+AGG - chr5.4:57059546-57059565 None:intergenic 45.0%
CGTTTCAAGCTCCTTACCAA+AGG - chr5.4:57061137-57061156 None:intergenic 45.0%
CTACATGTTGCTGCATCTGA+AGG + chr5.4:57061665-57061684 MS.gene26134:CDS 45.0%
CTTATCCCACTAAGTGGAGT+TGG + chr5.4:57061988-57062007 MS.gene26134:intron 45.0%
CTTCACCCAACCTATGTAGT+GGG + chr5.4:57057731-57057750 MS.gene26134:intron 45.0%
CTTCAGATGCAGCAACATGT+AGG - chr5.4:57061667-57061686 None:intergenic 45.0%
CTTTGGCGACAAATTTCTGC+TGG + chr5.4:57059036-57059055 MS.gene26134:intron 45.0%
GAAGTAGGCATAGCTGATGA+TGG + chr5.4:57060555-57060574 MS.gene26134:CDS 45.0%
GCCCAAAACTGTTTCAATGC+AGG + chr5.4:57060530-57060549 MS.gene26134:intron 45.0%
GGGGATCAACACTTTCTAAC+TGG + chr5.4:57059355-57059374 MS.gene26134:intron 45.0%
GGTGTAGACATCAACGTCAA+AGG + chr5.4:57061344-57061363 MS.gene26134:CDS 45.0%
GTTTCAATGCAGGAGGAAGT+AGG + chr5.4:57060540-57060559 MS.gene26134:intron 45.0%
TACACTACCTGAATCCCAAG+AGG + chr5.4:57057507-57057526 MS.gene26134:CDS 45.0%
TAGCAATGGCACATGTGTCA+TGG + chr5.4:57056948-57056967 MS.gene26134:intron 45.0%
TATCCATGTGTAGCCCTCTT+GGG - chr5.4:57057524-57057543 None:intergenic 45.0%
TCACCACATCGTAGATGAAG+AGG - chr5.4:57061195-57061214 None:intergenic 45.0%
TCAGATGCAGCAACATGTAG+GGG - chr5.4:57061665-57061684 None:intergenic 45.0%
TCCTTGTAACCAACTCCACT+TGG + chr5.4:57058033-57058052 MS.gene26134:intron 45.0%
TCTTCACCCAACCTATGTAG+TGG + chr5.4:57057730-57057749 MS.gene26134:intron 45.0%
TCTTCTTGGATGTATGCCCT+GGG + chr5.4:57056482-57056501 MS.gene26134:CDS 45.0%
TTACTATGGCTACTGTCGGT+AGG + chr5.4:57057635-57057654 MS.gene26134:intron 45.0%
TTGATATGTCTCACCACACC+AGG - chr5.4:57058228-57058247 None:intergenic 45.0%
TTTCAAACTGCAAACGCACG+TGG - chr5.4:57058704-57058723 None:intergenic 45.0%
TTTCTTGCGCGTGTAATGTC+AGG + chr5.4:57060033-57060052 MS.gene26134:intron 45.0%
! ACACATGTGCCATTGCTATG+AGG - chr5.4:57056946-57056965 None:intergenic 45.0%
! ACATGTGCCATTGCTATGAG+GGG - chr5.4:57056944-57056963 None:intergenic 45.0%
! ACCAAGTGGAGTTGGTTACA+AGG - chr5.4:57058037-57058056 None:intergenic 45.0%
! CACATGTGCCATTGCTATGA+GGG - chr5.4:57056945-57056964 None:intergenic 45.0%
! CATGACAGCCTTGATAGTCA+AGG + chr5.4:57058581-57058600 MS.gene26134:CDS 45.0%
! CCAAGTCTTATCCCACTAAG+TGG + chr5.4:57061982-57062001 MS.gene26134:intron 45.0%
! CGTGGCCCTTTATTTGTTCA+CGG - chr5.4:57058686-57058705 None:intergenic 45.0%
! TTAGAGAAGGGGCCTCTTTT+AGG + chr5.4:57061522-57061541 MS.gene26134:CDS 45.0%
! TTTTATGCGCCCTTGTCCAT+TGG + chr5.4:57059475-57059494 MS.gene26134:intron 45.0%
!! CAACAAGCATTGGAATCAGG+TGG - chr5.4:57058888-57058907 None:intergenic 45.0%
!! TTCCTTCTCCATTTTTCCCC+TGG + chr5.4:57062208-57062227 MS.gene26134:intron 45.0%
!! TTTTGTCTGTGATGGTGTGC+TGG + chr5.4:57060164-57060183 MS.gene26134:CDS 45.0%
!! AATAATAATTATATGATTTA+TGG - chr5.4:57062022-57062041 None:intergenic 5.0%
!! ATAATAATTATATGATTTAT+GGG - chr5.4:57062021-57062040 None:intergenic 5.0%
!! TAAAATAAAAGTTATATATA+TGG - chr5.4:57059792-57059811 None:intergenic 5.0%
AACCTTGTAGATGAGGTCCC+AGG - chr5.4:57056502-57056521 None:intergenic 50.0%
AATCCCAAGAGGGCTACACA+TGG + chr5.4:57057518-57057537 MS.gene26134:CDS 50.0%
ACACGAACAGTATGTGGCTG+AGG - chr5.4:57060651-57060670 None:intergenic 50.0%
ACATCCATGCCGTGTTCAAC+CGG - chr5.4:57060857-57060876 None:intergenic 50.0%
ACCACTCCCACTACATAGGT+TGG - chr5.4:57057740-57057759 None:intergenic 50.0%
ACCTTGTAGATGAGGTCCCA+GGG - chr5.4:57056501-57056520 None:intergenic 50.0%
AGACAGTCAGACCTATCGCA+TGG + chr5.4:57056113-57056132 MS.gene26134:CDS 50.0%
AGATGCAGCAACATGTAGGG+GGG - chr5.4:57061663-57061682 None:intergenic 50.0%
AGCGGTTGCAAGAGGAGATT+CGG + chr5.4:57061574-57061593 MS.gene26134:CDS 50.0%
CAAGAGGGCTACACATGGAT+AGG + chr5.4:57057523-57057542 MS.gene26134:CDS 50.0%
CAGATGCAGCAACATGTAGG+GGG - chr5.4:57061664-57061683 None:intergenic 50.0%
CCACTCCCACTACATAGGTT+GGG - chr5.4:57057739-57057758 None:intergenic 50.0%
CTAGAGCGCAACAGCTCATT+TGG + chr5.4:57060600-57060619 MS.gene26134:CDS 50.0%
CTATCCATGTGTAGCCCTCT+TGG - chr5.4:57057525-57057544 None:intergenic 50.0%
CTCATCCGAGCTTCATCAAG+CGG - chr5.4:57062356-57062375 None:intergenic 50.0%
CTTGATGAAGCTCGGATGAG+TGG + chr5.4:57062356-57062375 MS.gene26134:CDS 50.0%
GCCCAATTCACTAGTGTGCT+AGG + chr5.4:57061851-57061870 MS.gene26134:intron 50.0%
GGGAACACTGTGCACTTCTT+TGG - chr5.4:57062589-57062608 None:intergenic 50.0%
TAGCATCTTGCTGCATGCAG+AGG + chr5.4:57061287-57061306 MS.gene26134:intron 50.0%
TCAGGTTACTAGGCTCCATG+AGG + chr5.4:57060083-57060102 MS.gene26134:intron 50.0%
TGCTACTCTCCGGTTGAACA+CGG + chr5.4:57060845-57060864 MS.gene26134:intron 50.0%
TGCTGCATGCAGAGGATATG+AGG + chr5.4:57061295-57061314 MS.gene26134:CDS 50.0%
TTATGCTCAGCGGTTGCAAG+AGG + chr5.4:57061566-57061585 MS.gene26134:CDS 50.0%
TTTGGATCCCACGGATGGAA+CGG - chr5.4:57062610-57062629 None:intergenic 50.0%
! GTTCTTTTGGATCCCACGGA+TGG - chr5.4:57062615-57062634 None:intergenic 50.0%
AGTGTTCCCGTTCCATCCGT+GGG + chr5.4:57062600-57062619 MS.gene26134:CDS 55.0%
GCAGACCACTCCCACTACAT+AGG - chr5.4:57057744-57057763 None:intergenic 55.0%
GTGAACTGTGTAGGGTCCTG+CGG + chr5.4:57060673-57060692 MS.gene26134:CDS 55.0%
GTGTAGCCCTCTTGGGATTC+AGG - chr5.4:57057517-57057536 None:intergenic 55.0%
TTGGATCCCACGGATGGAAC+GGG - chr5.4:57062609-57062628 None:intergenic 55.0%
! CCCAACCTATGTAGTGGGAG+TGG + chr5.4:57057736-57057755 MS.gene26134:intron 55.0%
!! CATAGCTGATGATGGGTCCG+AGG + chr5.4:57060563-57060582 MS.gene26134:CDS 55.0%
!! GGATGCGGTGCCATAGATCT+TGG - chr5.4:57056329-57056348 None:intergenic 55.0%
ACAGGCTTGTGGACGGAGAG+AGG + chr5.4:57057309-57057328 MS.gene26134:intron 60.0%
CACTGACGCTGCAGTCCTTC+AGG + chr5.4:57058731-57058750 MS.gene26134:CDS 60.0%
CAGTGTTCCCGTTCCATCCG+TGG + chr5.4:57062599-57062618 MS.gene26134:CDS 60.0%
CTCTCCGGTTGAACACGGCA+TGG + chr5.4:57060850-57060869 MS.gene26134:intron 60.0%
GCCCTGGGACCTCATCTACA+AGG + chr5.4:57056497-57056516 MS.gene26134:CDS 60.0%
GTGGACGGAGAGAGGAAGTG+AGG + chr5.4:57057317-57057336 MS.gene26134:CDS 60.0%
! AAACAGTAGCGTCGGGCGTC+AGG - chr5.4:57061921-57061940 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 57056003 57062816 57056003 ID=MS.gene26134
chr5.4 mRNA 57056003 57062816 57056003 ID=MS.gene26134.t1;Parent=MS.gene26134
chr5.4 exon 57056003 57056163 57056003 ID=MS.gene26134.t1.exon1;Parent=MS.gene26134.t1
chr5.4 CDS 57056003 57056163 57056003 ID=cds.MS.gene26134.t1;Parent=MS.gene26134.t1
chr5.4 exon 57056455 57056518 57056455 ID=MS.gene26134.t1.exon2;Parent=MS.gene26134.t1
chr5.4 CDS 57056455 57056518 57056455 ID=cds.MS.gene26134.t1;Parent=MS.gene26134.t1
chr5.4 exon 57057313 57057652 57057313 ID=MS.gene26134.t1.exon3;Parent=MS.gene26134.t1
chr5.4 CDS 57057313 57057652 57057313 ID=cds.MS.gene26134.t1;Parent=MS.gene26134.t1
chr5.4 exon 57058484 57058779 57058484 ID=MS.gene26134.t1.exon4;Parent=MS.gene26134.t1
chr5.4 CDS 57058484 57058779 57058484 ID=cds.MS.gene26134.t1;Parent=MS.gene26134.t1
chr5.4 exon 57059144 57059224 57059144 ID=MS.gene26134.t1.exon5;Parent=MS.gene26134.t1
chr5.4 CDS 57059144 57059224 57059144 ID=cds.MS.gene26134.t1;Parent=MS.gene26134.t1
chr5.4 exon 57060087 57060185 57060087 ID=MS.gene26134.t1.exon6;Parent=MS.gene26134.t1
chr5.4 CDS 57060087 57060185 57060087 ID=cds.MS.gene26134.t1;Parent=MS.gene26134.t1
chr5.4 exon 57060552 57060773 57060552 ID=MS.gene26134.t1.exon7;Parent=MS.gene26134.t1
chr5.4 CDS 57060552 57060773 57060552 ID=cds.MS.gene26134.t1;Parent=MS.gene26134.t1
chr5.4 exon 57060954 57061139 57060954 ID=MS.gene26134.t1.exon8;Parent=MS.gene26134.t1
chr5.4 CDS 57060954 57061139 57060954 ID=cds.MS.gene26134.t1;Parent=MS.gene26134.t1
chr5.4 exon 57061290 57061365 57061290 ID=MS.gene26134.t1.exon9;Parent=MS.gene26134.t1
chr5.4 CDS 57061290 57061365 57061290 ID=cds.MS.gene26134.t1;Parent=MS.gene26134.t1
chr5.4 exon 57061453 57061747 57061453 ID=MS.gene26134.t1.exon10;Parent=MS.gene26134.t1
chr5.4 CDS 57061453 57061747 57061453 ID=cds.MS.gene26134.t1;Parent=MS.gene26134.t1
chr5.4 exon 57062340 57062458 57062340 ID=MS.gene26134.t1.exon11;Parent=MS.gene26134.t1
chr5.4 CDS 57062340 57062458 57062340 ID=cds.MS.gene26134.t1;Parent=MS.gene26134.t1
chr5.4 exon 57062575 57062816 57062575 ID=MS.gene26134.t1.exon12;Parent=MS.gene26134.t1
chr5.4 CDS 57062575 57062816 57062575 ID=cds.MS.gene26134.t1;Parent=MS.gene26134.t1
Gene Sequence

>MS.gene26134

ATGGAGTTTGGATTTTTTCGTGGCCTGCCAGAGAATCTCTTTATACTGGATATTGTAGGACAAATAGCTTTTCTTGTGGACATTGTTTTGCAGTTCTTTGTTGCTTATAGAGACAGTCAGACCTATCGCATGGTTTGCAATCGTACTCCTATTGCTCTGCGGTAAATTTTCTCCTTATGTTGTATTTCTTGATAATAGTTACACATTTGATAGATATAGTCTGAAACAATGTTTATAATTGTGAGATATCTCTCACCTTATAATGTCGGTTTAATAGGTTAAGTGTGACACAATATAATTTTTATGATGGTATCATAGTCTATCCAAGATCTATGGCACCGCATCCGTTATTGTTGTATAGCTGATATTTGATATATGCTGAAATGGGATGCTGGTCAGCATATTGAATTGTTTTTCATTTGATTTATGGCTTCCTTGTTTCTTTTCTGTAGGTATCTAAAATCTACCTTTGTCATTGATCTTCTTGGATGTATGCCCTGGGACCTCATCTACAAGGTTCTACTTCTTGCAGATAAACCTAAATTTCCAGAATACATTTCTCACTTGAGGAATTGTATTGGCCTCTATAATTTACTATGATCCTAAACATTGTTTCAAAAATGATTTATATAATGCCTGTTCTTCTTTCACAGCAGTTCAAGGCTTTTAGCATATTTTCCAGTTTGCAATGAAATGTCAACTATTAGAATTAGAGGAAACTTTATCCCCATTTTACTTTTTCTTTAACTTTCCATGGAAATTTCACTGGGATTAGATTTGATTTTAAATCATTTTAACATCTATATAAAGTTAGGCGAGTCAAATGTCCAGTTCAATTGACCAACTATTTGTTGATAGTCTGTCACAATACTTTATGTTGGGGTGATAGAAATTTTTGGGCATTTCTTTTGTGTCCTATAGTCACAAATATAGTTTAACCCCTCATAGCAATGGCACATGTGTCATGGTTCTTTTGTTGTGTTTCTGTTTCGCTGGTTCACAAGTTTACAAACTTAAGAATGTATATATTAATCATTAGTCATGTTGCATACAACACTTTGTTGCACAAGTTGCGAAGCCTGTTATTAAAAGGCAGAATTTTGTACTTGTGTGTCTTCCTGCGCAATTTATTTAGCTAAGCACAAGTTAAGATTAATGTTGGCTGTGGTTTTGAAACATGGAGAGTACAGATGTAGAACGAAACTTGTTATAATAACTTGTTAAAGCCCTTTGTCATGACTTCTGGTTTTATAGCAAGTTCTTTATTATTGAAAGTTTCCAGTTCATTGAGGTTAACCTTTTATGAACAGGCTTGTGGACGGAGAGAGGAAGTGAGGTACCTATTATGGATCAGATTATATAGGGCAGAGAGAGTTGTGCAATTTTTCAGGAATTTGGAGAAAGATATACGTGTCAATTACATTATTGCTCGGATTGTGAAACTTTTAGTTGTTGAACTCTACTGCACTCACACAGCAGCCTGCATATTCTACTATTTAGCTACTACACTACCTGAATCCCAAGAGGGCTACACATGGATAGGAAGTTTGAAACTGGGTGACTATGCTTATTCAAAGTTCAGAGAAATTGATATTTGGAAGCGCTACACGACATCGTTGTATTTTGCTATTGTTACTATGGCTACTGTCGGTAGGTATCTTTTTTTAAAATTTAATTAGATTTAATTCATAATGCATAATGATTTTCATTTTGTCTGGCATTAGTTATCTTCACCCAACCTATGTAGTGGGAGTGGTCTGCTTTCAGTATTTAAATAGATGGTCACTAGCATAGATAAAATTAGAGGGGTATGCGGTAATTGCTAGCCAATTGTAGAACTTAGACATATCTTTAATGTGATGGATCAATGATTCTTCCTCTACTCTTTTTGTTTGGGAAACAATTGAAAGAAACTCTGAATAAAGGATTAGATATAGTCTGAAGAAAATTGTTGGAGTAACCATTTAAACAGATTTAGTGAACATTTGGTCTATGTAGACTTAGAACCAAGTTGTATTATGATGATTTAATCCTTGTAACCAACTCCACTTGGTAAGCATAAGTCTTGAATGTTGTTATTTGTCATTAGTATTCACATAATTTTACTGATAAGAATGTCATAGTAACTCAAGTTTCAGTGCTTTGAAAAATAAAGCAGAAGAAACTCAGCCACTGTTTTCACACAGACCAAATCACAACACCATCTGTTATGAAATTACTGTCCTGGTGTGGTGAGACATATCAACACAAATTGAAATGTGAACCTTAGTTCATGACACAGCTGTTACTTTGTTTGCTGCTGCAGTTTTTCTAGGTTAAATGTATGAACTGACCGTTATCAGAACCGCTTCTATGTAGATCCATGTATTATTTGCATCGATTCTGAATGATTAATTTTTTTGTCCAAATTGTATACTATCTTATCACTCTTGGAAAGTTATTCTGAATGTATCATGCTTGCAACTTTCTTTTCTTTCACAGGATATGGAGATATACATGCAGTAAATTTGAGGGAGATGATATTCATAATGATTTATGTTTCATTTGACATGGTTCTTGGTGCTTACTTGATCGGTAACATGACAGCCTTGATAGTCAAGGGATCAAAGACTGAAAAGTTTAGGGACAGGATGACAGATCTGATGAAATATATGAATAGAAATAAACTTCATAAGGATATCCGTGAACAAATAAAGGGCCACGTGCGTTTGCAGTTTGAAAGCAGCTACACTGACGCTGCAGTCCTTCAGGATATTCCCATTTCTATTCGATCTAAGGTAATAAGAGAAAGAAGAGGTCCTTTAGCATCATTTATGGTTGTCTATGGAAATCAACATTGTTATTGTTCCTATTTGTTTTACTTTCTACAATAGCTTGCTTTGCCACCTGATTCCAATGCTTGTTGATATTTGTTCTCAATTTGTTCACTGGAATCATGTTTTGTTAGCTTTACTTGTAAAATTTCCCTACGTTTCATCTCTATATGTTATATCTGTCAAATTTGTCTTATGTTTCAGAAAATTCATCTTTGTTCTTTGGCGACAAATTTCTGCTGGAGTTTTAGGCCATCTTCTGTTCACATTTTCCATGAAAGCATCTGGTTTGTAGATTATTGTGTAACAGACTAATTAACTTTTGCAGATATTCGAATCATTGTATTCGCCATACATCAAAAACGTTCCTCTTTTTAGTGGATGCTCTTCAGAATTCATCAATCAGATTGTAAGTAATATTTTCCCCATTTCCTGCCATATATCAGTATGAAATGACATTAGTATTATCTATACTTTTGGTGGCTAAAGCTGGAAGCTCTCTTTTGCTTTTTGGACTTGATCTAAAACCTTAAAACTAAGGGGATCAACACTTTCTAACTGGTTTTTCTTTGACATGAAATATTTTGTTATTTAGACTCAAGGAAACAAGTATATTTTATTGACATTGATCTTTTCGTCAATCGGAAATGGCTTTCAACTTTTATGCGCCCTTGTCCATTGGATTTATTGTTTTCTACACAATTGAAATGTTCTACACTAATTTTATCCTTGAAAGAATTCAAGGGTCCGTTTGATTTGCAAAAAGTCAGGGTAATGGTTCAATGTTTGATTTAAATATGTTTGTTTGTAGGTCACAACAAATCAAACGATGAGTAACGTAACATGACAAAAATCCAAACACTTGTTACTCAACAAACTGTAGGAATAGGAGTATAGGACTGATTATTGTTCAAAGACAAACTATCTAAATAACAGTCTTTACCACTCAGTATATAATTATGCATGTGTGCATCCATATATATAACTTTTATTTTATTTTTTTTACATTTTGATTATATAATGTATGTGTGTGTGTGTATACATATGTAATATTTCATATATATGTAGAAACTTTGTATTGATACTGCCACTTTTACTTTCAAGGTTGAACTTTGGATTGATAAAAAAGAACTTGGTAGTATGGGCCTCTTTTCTGCATGCTGAATAAGATTAGTGATACCTTTGTTTAACGAGAGTTTCTAGCTCGTCCGTTATCATTTCTTGCGCGTGTAATGTCAGGTGATAATAATTTATGTTCTTTCATCTTTCAGGTTACTAGGCTCCATGAGGAATTCTTTCTTCCTGGGGAAGTTATAATGCAACAAGGTTACGTTGTAGATCAACTATATTTTGTCTGTGATGGTGTGCTGGTAAGATTTTATATTTCTACAACCACTTCGCTATTTTTCAATTTCTATGTTTTCCCATATTTCAGGTTTCTGATATTAGTCATAGCTTCTGAGTAACTGGAATTAGACCTACTAGTATTCATACCCTTTTATTACCCGATTCATGCCGGATAATGCTGAATTTTCTTTGCAATGTATTACCTTGTAAAAGTGTTTATGAGAATAGCATCTCTGAGATTCTTATGATTGTTCTTCATAATATCTTCCATAGGTCAACAAAGAGGAAACAACTTTAGTATGAATTTTAGAACTACTTCATTGATAGTTTTTTCACAGAAGACGAGTTTCAGTTATGTTTATTGAATGCCCAAAACTGTTTCAATGCAGGAGGAAGTAGGCATAGCTGATGATGGGTCCGAGGAAACTGTTGCACTTCTAGAGCGCAACAGCTCATTTGGAGAAATATCTATTCTTTGCAACATTCCTCAGCCACATACTGTTCGTGTTTGTGAACTGTGTAGGGTCCTGCGGATTGATAAACAATCCTTTTCAAATATCCTAGATATATACTTTTATGATGGGAAGAAAGTATTAGACAACCTTCTAGAGGTAATCATTATATTTTTTTTGACATCATCTTCCCTTTAATAGAGTATCTACCATGAGTTCAAAATGCATTATGCTACTCTCCGGTTGAACACGGCATGGATGTACTAAGTTACTCATTTTGGTATTATGCAATTTTATTATCTTCTGATCATGAGACACCTAATATCTCATATTTTACAGGGAAAAGAGTCTATTAGAGGTAAGCAATTGGAGTCAGACATCACATTCCATATTGGAAAGCTAGAATCTGATCTTGCTTTGAAGGTCAATAGAACAGCTTTTGATGGCGATATGTATCAGCTAACAAGTTTGATTCGAGCTGGAGCTGATCCCAAAAAGACAGATTATGATGGAAGATCACCTTTGGTAAGGAGCTTGAAACGTATTACTATGATATCATGTTATCAATAAATTCCATCCTCTTCATCTACGATGTGGTGATTAATTGATTATGCCACTAACAAATGCTGTTATAAAATGATTTCCTAATAAGAACCTTTGTTGTTTTTCGTATAGCATCTTGCTGCATGCAGAGGATATGAGGATATCACACTTCTTCTTATTCATGAAGGTGTAGACATCAACGTCAAAGGTAATTGTGTAACCTATATAGATATTCCTCGAGGATCAAACTTAAATTTTAGGTAATGCAAACATCACTGATGTCGTAATTTCACAGATAACTTTGGGAACACTCCGCTACTTGAAGCAGTTAAGAATGGACACGATCAGATTGCTTCTTTACTTGTTAGAGAAGGGGCCTCTTTTAGGATAGATGATGGTGGTAGTTTTTTATGCTCAGCGGTTGCAAGAGGAGATTCGGATTATCTTAAAAGGCTTTTATCTTATGGAATGGATGCTAACTTGAAAGATTATGACTATCGAACCCCCCTACATGTTGCTGCATCTGAAGGATTAATCTTCATGGCAAAGTTGTTATTAGAAGCCGGAGCTAGTGTTTTTACCAAAGACAGGTACTGTAATTGATTCTTATTTTACATGTTTAGACTAACATTACTAATGTTTCCAAGAAGGGGAACCTTTTCATACTTGTTTTCAGGTGAAAATTTAAAATTGGCCCAATTCACTAGTGTGCTAGGTTTGTGTGCATGCATGCTCACTTGCGTGTGTCTACAACTATAATCCTGACGCCCGACGCTACTGTTTTCTAGAATTCATGCCTATAAATCATACGACAACAACAACAACCAAGTCTTATCCCACTAAGTGGAGTTGGCTATATGCCCATAAATCATATAATTATTATTTCAAATCTTGATTTGCTATCATATACTGGACATACAATTCCAAAACAGAACATCAACATGGTATTAAAAGTATTGTGTTGTGAGTTCTTAATTGTGTTTTTATAGACATTACTAGTGCTCCGACCAAGATTGTCCGTTATAGGTGAAATATGAAATGGTTCTCTTTTTCCTTCTCCATTTTTCCCCTGGTTACAAAATACTTGGCTGAACTATATATATAGAATATGCTATAGGTTTAATGTTTCTTTCCTTTCCATTCCAAAACTTATCGTTTTTTTTTTCATTTCACGCAAAACAGATGGGGAAATACTCCGCTTGATGAAGCTCGGATGAGTGGAAATAAAAATCTGATAAAGCTACTGGAAGATGCAAAATCAGCTCAATTGACAGAATTCCCTTTTCCCCAAGAAATTACAGGTACTGATATGTCGCAAAAGCCTTCTTTTTATCTTTTCATTTTTCTCTACTTTTCTTGAATCTAGATCATATATTGCTGTAAACTCAAATTTAAATCCATCTATCATTTTTTTCAGATAAAGTACATCCAAAGAAGTGCACAGTGTTCCCGTTCCATCCGTGGGATCCAAAAGAACAAAGAAGAAATGGAATAGTATTATGGATTCCACACACCATTCAAGAGCTAATCAAAACAGCAGCAGAACAGATAGGATTTTCCGGTGACTCTTGTATTTTATCAGAAGATGCTGGTAAAATTATTGACGTTAGCATGATTAAGGATGATCAGAAGCTGTATTTAGTCAATGAAATGCATTAG
Protein sequence

>MS.gene26134.t1

MEFGFFRGLPENLFILDIVGQIAFLVDIVLQFFVAYRDSQTYRMVCNRTPIALRYLKSTFVIDLLGCMPWDLIYKACGRREEVRYLLWIRLYRAERVVQFFRNLEKDIRVNYIIARIVKLLVVELYCTHTAACIFYYLATTLPESQEGYTWIGSLKLGDYAYSKFREIDIWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMTDLMKYMNRNKLHKDIREQIKGHVRLQFESSYTDAAVLQDIPISIRSKIFESLYSPYIKNVPLFSGCSSEFINQIVTRLHEEFFLPGEVIMQQGYVVDQLYFVCDGVLEEVGIADDGSEETVALLERNSSFGEISILCNIPQPHTVRVCELCRVLRIDKQSFSNILDIYFYDGKKVLDNLLEGKESIRGKQLESDITFHIGKLESDLALKVNRTAFDGDMYQLTSLIRAGADPKKTDYDGRSPLHLAACRGYEDITLLLIHEGVDINVKDNFGNTPLLEAVKNGHDQIASLLVREGASFRIDDGGSFLCSAVARGDSDYLKRLLSYGMDANLKDYDYRTPLHVAASEGLIFMAKLLLEAGASVFTKDRWGNTPLDEARMSGNKNLIKLLEDAKSAQLTEFPFPQEITDKVHPKKCTVFPFHPWDPKEQRRNGIVLWIPHTIQELIKTAAEQIGFSGDSCILSEDAGKIIDVSMIKDDQKLYLVNEMH