Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26693.t1 | XP_003609968.1 | 98.9 | 453 | 5 | 0 | 1 | 453 | 1 | 453 | 1.50E-261 | 911.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26693.t1 | Q9C9P4 | 85.2 | 371 | 55 | 0 | 83 | 453 | 133 | 503 | 1.6e-192 | 673.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26693.t1 | G7JS67 | 98.9 | 453 | 5 | 0 | 1 | 453 | 1 | 453 | 1.1e-261 | 911.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene26693 | 0.868476 | 6.35E-66 | -1.69E-46 |
| MS.gene049151 | MS.gene26693 | 0.848062 | 7.79E-60 | -1.69E-46 |
| MS.gene049153 | MS.gene26693 | 0.868952 | 4.45E-66 | -1.69E-46 |
| MS.gene049260 | MS.gene26693 | 0.890475 | 9.53E-74 | -1.69E-46 |
| MS.gene050301 | MS.gene26693 | 0.812778 | 3.57E-51 | -1.69E-46 |
| MS.gene050900 | MS.gene26693 | 0.8167 | 4.83E-52 | -1.69E-46 |
| MS.gene051360 | MS.gene26693 | 0.829192 | 5.90E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene26693 | 0.825304 | 5.04E-54 | -1.69E-46 |
| MS.gene053555 | MS.gene26693 | 0.804895 | 1.73E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene26693 | 0.809527 | 1.81E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene26693 | 0.81936 | 1.21E-52 | -1.69E-46 |
| MS.gene055666 | MS.gene26693 | 0.840415 | 8.82E-58 | -1.69E-46 |
| MS.gene057448 | MS.gene26693 | 0.853385 | 2.47E-61 | -1.69E-46 |
| MS.gene057449 | MS.gene26693 | 0.83388 | 4.14E-56 | -1.69E-46 |
| MS.gene057450 | MS.gene26693 | 0.848041 | 7.89E-60 | -1.69E-46 |
| MS.gene057469 | MS.gene26693 | 0.842783 | 2.09E-58 | -1.69E-46 |
| MS.gene057690 | MS.gene26693 | 0.824584 | 7.46E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene26693 | 0.826244 | 3.02E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene26693 | 0.830212 | 3.33E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene26693 | 0.828976 | 6.66E-55 | -1.69E-46 |
| MS.gene05842 | MS.gene26693 | 0.804214 | 2.41E-49 | -1.69E-46 |
| MS.gene058833 | MS.gene26693 | 0.828675 | 7.88E-55 | -1.69E-46 |
| MS.gene058949 | MS.gene26693 | 0.808557 | 2.92E-50 | -1.69E-46 |
| MS.gene059128 | MS.gene26693 | 0.8097 | 1.66E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene26693 | 0.803245 | 3.82E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene26693 | 0.803643 | 3.16E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26693.t1 | MTR_4g124880 | 98.896 | 453 | 5 | 0 | 1 | 453 | 1 | 453 | 0.0 | 935 |
| MS.gene26693.t1 | MTR_2g043530 | 81.416 | 452 | 80 | 1 | 2 | 453 | 3 | 450 | 0.0 | 746 |
| MS.gene26693.t1 | MTR_2g043530 | 81.416 | 452 | 80 | 1 | 2 | 453 | 3 | 450 | 0.0 | 745 |
| MS.gene26693.t1 | MTR_4g124880 | 99.674 | 307 | 1 | 0 | 147 | 453 | 1 | 307 | 0.0 | 639 |
| MS.gene26693.t1 | MTR_1g103020 | 55.450 | 422 | 177 | 4 | 33 | 453 | 23 | 434 | 2.23e-163 | 472 |
| MS.gene26693.t1 | MTR_4g096690 | 60.477 | 377 | 146 | 3 | 79 | 453 | 57 | 432 | 2.62e-163 | 472 |
| MS.gene26693.t1 | MTR_8g099695 | 49.057 | 424 | 215 | 1 | 33 | 455 | 23 | 446 | 1.62e-150 | 439 |
| MS.gene26693.t1 | MTR_8g099715 | 44.500 | 400 | 168 | 5 | 57 | 455 | 12 | 358 | 2.92e-116 | 349 |
| MS.gene26693.t1 | MTR_1g069385 | 41.889 | 413 | 203 | 9 | 70 | 450 | 23 | 430 | 3.45e-89 | 282 |
| MS.gene26693.t1 | MTR_1g069385 | 46.474 | 312 | 154 | 5 | 147 | 450 | 1 | 307 | 1.68e-79 | 253 |
| MS.gene26693.t1 | MTR_8g099700 | 45.247 | 263 | 115 | 3 | 57 | 318 | 55 | 289 | 2.25e-73 | 234 |
| MS.gene26693.t1 | MTR_8g099705 | 51.240 | 121 | 54 | 1 | 348 | 463 | 1 | 121 | 1.69e-34 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26693.t1 | AT1G74960 | 79.859 | 427 | 76 | 4 | 36 | 453 | 78 | 503 | 0.0 | 694 |
| MS.gene26693.t1 | AT1G74960 | 79.859 | 427 | 76 | 4 | 36 | 453 | 78 | 503 | 0.0 | 694 |
| MS.gene26693.t1 | AT1G74960 | 79.859 | 427 | 76 | 4 | 36 | 453 | 78 | 503 | 0.0 | 694 |
| MS.gene26693.t1 | AT5G46290 | 58.098 | 389 | 162 | 1 | 66 | 453 | 47 | 435 | 6.16e-165 | 476 |
| MS.gene26693.t1 | AT5G46290 | 58.530 | 381 | 157 | 1 | 66 | 445 | 47 | 427 | 5.22e-163 | 472 |
| MS.gene26693.t1 | AT5G46290 | 46.272 | 389 | 153 | 3 | 66 | 453 | 47 | 380 | 2.38e-116 | 350 |
| MS.gene26693.t1 | AT2G04540 | 39.750 | 400 | 205 | 8 | 79 | 450 | 30 | 421 | 4.57e-81 | 260 |
Find 132 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATTCTCTTTACAAATTT+TGG | 0.039644 | 8.4:-9776669 | None:intergenic |
| TAACATACCACGTCTTTATC+TGG | 0.180757 | 8.4:-9780307 | None:intergenic |
| CCTAGTTGATTGACAATGTT+AGG | 0.262313 | 8.4:-9781665 | None:intergenic |
| CAGCTTCACCTCTGATGATA+TGG | 0.266974 | 8.4:-9777273 | None:intergenic |
| TCCACCATCCTCGCCCTTAC+GGG | 0.269962 | 8.4:+9781586 | MS.gene26693:CDS |
| TTCTTTCTTCAGAGGATTGC+TGG | 0.283303 | 8.4:+9776609 | MS.gene26693:intron |
| GCTGTAGAGATAGAATAATT+TGG | 0.292211 | 8.4:-9777211 | None:intergenic |
| CAAGCTCTGATTCATTGTTT+TGG | 0.300298 | 8.4:+9779912 | MS.gene26693:CDS |
| ACTACCCGTCTTTGCTTTGT+AGG | 0.309185 | 8.4:-9776395 | None:intergenic |
| CTCCACCATCCTCGCCCTTA+CGG | 0.330061 | 8.4:+9781585 | MS.gene26693:CDS |
| AACATATATGCAGAATTTCT+TGG | 0.340556 | 8.4:+9778453 | MS.gene26693:CDS |
| CCCATATTTGTTGTTGCAAA+AGG | 0.351308 | 8.4:-9777025 | None:intergenic |
| AAATTATTGTAGAAGATATC+TGG | 0.354741 | 8.4:-9776458 | None:intergenic |
| TAGAAGGATCGGTATTCCTT+TGG | 0.356304 | 8.4:-9777626 | None:intergenic |
| TAAAACAATGGCAGTAGCTT+TGG | 0.360494 | 8.4:+9776337 | MS.gene26693:CDS |
| GCCGATTAAAACTCCACATT+TGG | 0.361881 | 8.4:-9776781 | None:intergenic |
| TGCAGGTTTGGGAGGCTTTG+TGG | 0.372324 | 8.4:+9777587 | MS.gene26693:intron |
| GACTCTGCTATTATTCCAAT+TGG | 0.379283 | 8.4:+9777485 | MS.gene26693:CDS |
| AGAAGGATCGGTATTCCTTT+GGG | 0.380892 | 8.4:-9777625 | None:intergenic |
| CTGTAGGATGTGATGCTTTG+TGG | 0.388921 | 8.4:+9777455 | MS.gene26693:intron |
| GGGAGGCTTTGTGGCATGCC+GGG | 0.392119 | 8.4:+9777596 | MS.gene26693:CDS |
| CCCCGTTACCAAACTACTCT+TGG | 0.393521 | 8.4:+9781554 | MS.gene26693:CDS |
| CCCAAGAGTAGTTTGGTAAC+GGG | 0.395098 | 8.4:-9781555 | None:intergenic |
| AACACCATCTGGTGATCTTA+AGG | 0.395194 | 8.4:+9779884 | MS.gene26693:CDS |
| TGGGAGGCTTTGTGGCATGC+CGG | 0.403976 | 8.4:+9777595 | MS.gene26693:CDS |
| TGTAGGATGTGATGCTTTGT+GGG | 0.408063 | 8.4:+9777456 | MS.gene26693:intron |
| CTGTAGAGATAGAATAATTT+GGG | 0.409092 | 8.4:-9777210 | None:intergenic |
| TCCTTGATATATAGGCAATC+AGG | 0.410362 | 8.4:+9780248 | MS.gene26693:intron |
| CCCGTTACCAAACTACTCTT+GGG | 0.412752 | 8.4:+9781555 | MS.gene26693:CDS |
| CGGGTAGTTGTGACAGGCTT+GGG | 0.416581 | 8.4:+9776410 | MS.gene26693:CDS |
| TTCTAAAGCATCACGCCCTT+GGG | 0.417588 | 8.4:+9777644 | MS.gene26693:CDS |
| CTCAGCATTAGGTGGCTTCA+AGG | 0.426165 | 8.4:+9776803 | MS.gene26693:CDS |
| TTTCTTTGTTGTGACCTCTT+GGG | 0.437189 | 8.4:-9776366 | None:intergenic |
| TTCTACAATAATTTACTCAA+TGG | 0.438814 | 8.4:+9776467 | MS.gene26693:CDS |
| CAAGGGCGTGATGCTTTAGA+AGG | 0.444832 | 8.4:-9777642 | None:intergenic |
| CTTCTAAAGCATCACGCCCT+TGG | 0.452651 | 8.4:+9777643 | MS.gene26693:CDS |
| TTATGGATTGCAGGGATGGA+TGG | 0.453393 | 8.4:+9777186 | MS.gene26693:intron |
| GTGTAATACTTTGCATTGAA+AGG | 0.455280 | 8.4:+9779799 | MS.gene26693:CDS |
| GTTGAGATTACCAGAATGAA+TGG | 0.462504 | 8.4:-9774813 | None:intergenic |
| TATTCCTTTGGGAGAGTGCC+CGG | 0.462858 | 8.4:-9777614 | None:intergenic |
| ACCAAAATTTGTAAAGAGAA+TGG | 0.463226 | 8.4:+9776668 | MS.gene26693:CDS |
| TTTGTTGTGACCTCTTGGGC+AGG | 0.466126 | 8.4:-9776362 | None:intergenic |
| TCTATGATCGGTCATCTACT+AGG | 0.466821 | 8.4:+9780107 | MS.gene26693:CDS |
| TGCCATGCTTGCAATGGACC+TGG | 0.470104 | 8.4:+9777051 | MS.gene26693:CDS |
| TATGGATTGCAGGGATGGAT+GGG | 0.470852 | 8.4:+9777187 | MS.gene26693:intron |
| GATATATAGGCAATCAGGAC+AGG | 0.472204 | 8.4:+9780253 | MS.gene26693:intron |
| TCAGCGAATTGTCCGAGGAC+GGG | 0.474925 | 8.4:+9781508 | MS.gene26693:intron |
| ACGGGTCCTTGTGGAGCGGC+AGG | 0.483060 | 8.4:+9781526 | MS.gene26693:CDS |
| TGTAATACTTTGCATTGAAA+GGG | 0.485379 | 8.4:+9779800 | MS.gene26693:CDS |
| CTAGTTGATTGACAATGTTA+GGG | 0.487189 | 8.4:-9781664 | None:intergenic |
| AAGCTTTACGAATATCATAT+AGG | 0.488975 | 8.4:+9776981 | MS.gene26693:CDS |
| AACATACCACGTCTTTATCT+GGG | 0.492113 | 8.4:-9780306 | None:intergenic |
| CATGCTACATCAACACCATC+TGG | 0.494547 | 8.4:+9779873 | MS.gene26693:CDS |
| AGTTGTGACAGGCTTGGGTG+TGG | 0.505911 | 8.4:+9776415 | MS.gene26693:CDS |
| TTGGGTGTGGTTACACCACT+TGG | 0.507317 | 8.4:+9776428 | MS.gene26693:CDS |
| TTCAGCGAATTGTCCGAGGA+CGG | 0.516483 | 8.4:+9781507 | MS.gene26693:intron |
| CCCCAAGAGTAGTTTGGTAA+CGG | 0.517152 | 8.4:-9781556 | None:intergenic |
| ACTTTGCATTGAAAGGGCAT+TGG | 0.518153 | 8.4:+9779806 | MS.gene26693:CDS |
| AACCAGGTCCATTGCAAGCA+TGG | 0.519213 | 8.4:-9777053 | None:intergenic |
| GTTGCAAAAGGAATACAGAA+AGG | 0.520951 | 8.4:-9777013 | None:intergenic |
| CCTAACATTGTCAATCAACT+AGG | 0.523296 | 8.4:+9781665 | MS.gene26693:CDS |
| TAGCATTAGAAACTGACATA+AGG | 0.523524 | 8.4:-9781701 | None:intergenic |
| CAAAACAATGAATCAGAGCT+TGG | 0.527059 | 8.4:-9779911 | None:intergenic |
| GGGCTCTGCCATGCTTGCAA+TGG | 0.527741 | 8.4:+9777045 | MS.gene26693:CDS |
| AACTTCCTACAAAGCAAAGA+CGG | 0.528880 | 8.4:+9776390 | MS.gene26693:CDS |
| AGAAGAATTGGAGCATGCTA+AGG | 0.530198 | 8.4:+9778207 | MS.gene26693:CDS |
| AATCGTGATGGATTTGTCAT+GGG | 0.531302 | 8.4:+9778160 | MS.gene26693:CDS |
| TTTCCCCGTAAGGGCGAGGA+TGG | 0.532586 | 8.4:-9781590 | None:intergenic |
| GAATCGTGATGGATTTGTCA+TGG | 0.538209 | 8.4:+9778159 | MS.gene26693:intron |
| ACGGGTAGTTGTGACAGGCT+TGG | 0.538612 | 8.4:+9776409 | MS.gene26693:CDS |
| CAAAGACGGGTAGTTGTGAC+AGG | 0.539386 | 8.4:+9776404 | MS.gene26693:CDS |
| GAAAGGGCATTGGTCCAGTC+GGG | 0.540117 | 8.4:+9779816 | MS.gene26693:CDS |
| CCCCGTAAGGGCGAGGATGG+TGG | 0.542630 | 8.4:-9781587 | None:intergenic |
| TGCTACAGCTTCTACACCAC+CGG | 0.544236 | 8.4:-9780135 | None:intergenic |
| ATGCTCTATCTGCTAACAGC+GGG | 0.552465 | 8.4:+9776699 | MS.gene26693:CDS |
| TGATATTCGTAAAGCTTCGA+TGG | 0.552755 | 8.4:-9776975 | None:intergenic |
| GTCAATTTGATCTATAAATG+AGG | 0.553684 | 8.4:-9781639 | None:intergenic |
| AGATTACCAGAATGAATGGA+TGG | 0.556232 | 8.4:-9774809 | None:intergenic |
| TTCACCTCTGATGATATGGT+TGG | 0.556394 | 8.4:-9777269 | None:intergenic |
| TGAAAGGGCATTGGTCCAGT+CGG | 0.557532 | 8.4:+9779815 | MS.gene26693:CDS |
| GGTCATCTACTAGGTGCATC+CGG | 0.562316 | 8.4:+9780116 | MS.gene26693:CDS |
| GCTCCACAAGGACCCGTCCT+CGG | 0.563668 | 8.4:-9781520 | None:intergenic |
| TGTCCGAGGACGGGTCCTTG+TGG | 0.567013 | 8.4:+9781517 | MS.gene26693:CDS |
| CGTGTAGAGTGATGAAGAAG+TGG | 0.569747 | 8.4:-9774666 | None:intergenic |
| TAAAATTTACCATCAGGATG+TGG | 0.576322 | 8.4:-9778513 | None:intergenic |
| AATTTACTCAATGGTGTCAG+TGG | 0.582043 | 8.4:+9776476 | MS.gene26693:CDS |
| ACTTCCTACAAAGCAAAGAC+GGG | 0.585727 | 8.4:+9776391 | MS.gene26693:CDS |
| GTAGGATGTGATGCTTTGTG+GGG | 0.586382 | 8.4:+9777457 | MS.gene26693:intron |
| ATATTTGGTGCAGGTTTGGG+AGG | 0.586750 | 8.4:+9777579 | MS.gene26693:intron |
| GATGAGAGAACTCCGCCAGT+GGG | 0.587987 | 8.4:-9781617 | None:intergenic |
| CCACCATCCTCGCCCTTACG+GGG | 0.588494 | 8.4:+9781587 | MS.gene26693:CDS |
| AGAAGCTGTAGCAACAGTAC+AGG | 0.589449 | 8.4:+9780145 | MS.gene26693:CDS |
| ATGATATTACAGAATCGTGA+TGG | 0.590365 | 8.4:+9778148 | MS.gene26693:intron |
| TTACGGGGAAAATTCCCCAC+TGG | 0.591017 | 8.4:+9781602 | MS.gene26693:CDS |
| AATTCTACAAAATCTATGAT+CGG | 0.591524 | 8.4:+9780095 | MS.gene26693:CDS |
| GCGTGATGCTTTAGAAGGAT+CGG | 0.592328 | 8.4:-9777637 | None:intergenic |
| ATATATGCAGAATTTCTTGG+TGG | 0.592841 | 8.4:+9778456 | MS.gene26693:CDS |
| GAGTTAGATAAAACCAAATG+TGG | 0.595646 | 8.4:+9776768 | MS.gene26693:CDS |
| CACGTGACTGACATGCAAGA+TGG | 0.595899 | 8.4:-9774698 | None:intergenic |
| AGTGAAAAGATGTTCTGATA+CGG | 0.601809 | 8.4:-9774730 | None:intergenic |
| GATCTACCTGCCGCTCCACA+AGG | 0.602912 | 8.4:-9781532 | None:intergenic |
| TGGAATTACTGAAGATGTGA+TGG | 0.603643 | 8.4:+9776743 | MS.gene26693:CDS |
| AGTCACGTGATATGCATCGC+AGG | 0.603663 | 8.4:-9778487 | None:intergenic |
| ATCGTGATGGATTTGTCATG+GGG | 0.604178 | 8.4:+9778161 | MS.gene26693:CDS |
| ATATTTCAGCGAATTGTCCG+AGG | 0.605979 | 8.4:+9781503 | MS.gene26693:intron |
| ATAAGTATTACAGTATCCCA+AGG | 0.611602 | 8.4:-9777660 | None:intergenic |
| CTTCTTCATCACTCTACACG+TGG | 0.613055 | 8.4:+9774669 | MS.gene26693:CDS |
| CATGCCGGGCACTCTCCCAA+AGG | 0.617185 | 8.4:+9777610 | MS.gene26693:CDS |
| CCGTTACCAAACTACTCTTG+GGG | 0.618550 | 8.4:+9781556 | MS.gene26693:CDS |
| AGCTTTGGAACCTGCCCAAG+AGG | 0.621929 | 8.4:+9776352 | MS.gene26693:CDS |
| CCAGTCGGGAGTTTCAAAAG+AGG | 0.627585 | 8.4:+9779830 | MS.gene26693:CDS |
| CAAATTTCAAGGTAAAACAA+TGG | 0.631881 | 8.4:+9776325 | MS.gene26693:intron |
| TTAATCGGCTCAGCATTAGG+TGG | 0.634657 | 8.4:+9776795 | MS.gene26693:CDS |
| ATATATAGGCAATCAGGACA+GGG | 0.638829 | 8.4:+9780254 | MS.gene26693:intron |
| CGGGGAAAATTCCCCACTGG+CGG | 0.638960 | 8.4:+9781605 | MS.gene26693:CDS |
| CCAAGAGTAGTTTGGTAACG+GGG | 0.639061 | 8.4:-9781554 | None:intergenic |
| GTGACTGAGCCACATCCTGA+TGG | 0.640223 | 8.4:+9778504 | MS.gene26693:CDS |
| GCAGCCAACCATATCATCAG+AGG | 0.652104 | 8.4:+9777265 | MS.gene26693:CDS |
| ATAGGCAATCAGGACAGGGT+GGG | 0.653135 | 8.4:+9780258 | MS.gene26693:intron |
| CGTTACCAAACTACTCTTGG+GGG | 0.655977 | 8.4:+9781557 | MS.gene26693:CDS |
| GAGGACGGGTCCTTGTGGAG+CGG | 0.659762 | 8.4:+9781522 | MS.gene26693:CDS |
| TAGGATGTGATGCTTTGTGG+GGG | 0.661354 | 8.4:+9777458 | MS.gene26693:intron |
| TATAGGCAATCAGGACAGGG+TGG | 0.670479 | 8.4:+9780257 | MS.gene26693:intron |
| GGATGAGAGAACTCCGCCAG+TGG | 0.679059 | 8.4:-9781618 | None:intergenic |
| CATCTACTAGGTGCATCCGG+TGG | 0.679685 | 8.4:+9780119 | MS.gene26693:CDS |
| TATTCCTTAAGATCACCAGA+TGG | 0.680897 | 8.4:-9779888 | None:intergenic |
| TATGCTCTATCTGCTAACAG+CGG | 0.684258 | 8.4:+9776698 | MS.gene26693:CDS |
| ATATCTGGATCATGACCAAG+TGG | 0.685208 | 8.4:-9776443 | None:intergenic |
| TAAGTATTACAGTATCCCAA+GGG | 0.698845 | 8.4:-9777659 | None:intergenic |
| ATGAGAGAACTCCGCCAGTG+GGG | 0.707740 | 8.4:-9781616 | None:intergenic |
| TCGTGATGGATTTGTCATGG+GGG | 0.752537 | 8.4:+9778162 | MS.gene26693:CDS |
| TGAAAACCCAGATAAAGACG+TGG | 0.755345 | 8.4:+9780300 | MS.gene26693:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 9774659 | 9781718 | 9774659 | ID=MS.gene26693 |
| chr8.4 | mRNA | 9774659 | 9781718 | 9774659 | ID=MS.gene26693.t1;Parent=MS.gene26693 |
| chr8.4 | exon | 9774659 | 9774824 | 9774659 | ID=MS.gene26693.t1.exon1;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9774659 | 9774824 | 9774659 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| chr8.4 | exon | 9776336 | 9776541 | 9776336 | ID=MS.gene26693.t1.exon2;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9776336 | 9776541 | 9776336 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| chr8.4 | exon | 9776621 | 9776824 | 9776621 | ID=MS.gene26693.t1.exon3;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9776621 | 9776824 | 9776621 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| chr8.4 | exon | 9776962 | 9777072 | 9776962 | ID=MS.gene26693.t1.exon4;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9776962 | 9777072 | 9776962 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| chr8.4 | exon | 9777199 | 9777294 | 9777199 | ID=MS.gene26693.t1.exon5;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9777199 | 9777294 | 9777199 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| chr8.4 | exon | 9777461 | 9777506 | 9777461 | ID=MS.gene26693.t1.exon6;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9777461 | 9777506 | 9777461 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| chr8.4 | exon | 9777592 | 9777671 | 9777592 | ID=MS.gene26693.t1.exon7;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9777592 | 9777671 | 9777592 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| chr8.4 | exon | 9778160 | 9778228 | 9778160 | ID=MS.gene26693.t1.exon8;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9778160 | 9778228 | 9778160 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| chr8.4 | exon | 9778441 | 9778525 | 9778441 | ID=MS.gene26693.t1.exon9;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9778441 | 9778525 | 9778441 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| chr8.4 | exon | 9779793 | 9779947 | 9779793 | ID=MS.gene26693.t1.exon10;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9779793 | 9779947 | 9779793 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| chr8.4 | exon | 9780086 | 9780166 | 9780086 | ID=MS.gene26693.t1.exon11;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9780086 | 9780166 | 9780086 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| chr8.4 | exon | 9780262 | 9780321 | 9780262 | ID=MS.gene26693.t1.exon12;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9780262 | 9780321 | 9780262 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| chr8.4 | exon | 9781512 | 9781718 | 9781512 | ID=MS.gene26693.t1.exon13;Parent=MS.gene26693.t1 |
| chr8.4 | CDS | 9781512 | 9781718 | 9781512 | ID=cds.MS.gene26693.t1;Parent=MS.gene26693.t1 |
| Gene Sequence |
| Protein sequence |
