AlfalfaGEDB | MS.gene050900

M. sativa cultivar XinJiangDaYe / MS.gene050900

KEGG: -
GO: GO:0003674 GO:0005488 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0030001 GO:0043167 GO:0043169 GO:0046872 GO:0051179 GO:0051234
PFAM: PF00403.29

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050900.t1	XP_003626251.1	93.8	340	17	3	19	356	28	365	4.60E-105	391.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050900.t1	Q84J88	57.7	71	30	0	19	89	25	95	4.5e-16	87.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050900.t1	A2Q330	93.8	340	17	3	19	356	28	365	3.3e-105	391.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050900	MS.gene053494	0.802487	5.48E-49	-1.69E-46
MS.gene050900	MS.gene057448	0.827286	1.70E-54	-1.69E-46
MS.gene050900	MS.gene057449	0.805845	1.10E-49	-1.69E-46
MS.gene050900	MS.gene057450	0.818685	1.72E-52	-1.69E-46
MS.gene050900	MS.gene066206	0.822267	2.60E-53	-1.69E-46
MS.gene050900	MS.gene069680	0.823049	1.71E-53	-1.69E-46
MS.gene050900	MS.gene069681	0.822469	2.33E-53	-1.69E-46
MS.gene050900	MS.gene069682	0.802526	5.38E-49	-1.69E-46
MS.gene050900	MS.gene070491	0.838853	2.25E-57	-1.69E-46
MS.gene050900	MS.gene072491	0.851081	1.12E-60	-1.69E-46
MS.gene050900	MS.gene08906	0.800815	1.21E-48	-1.69E-46
MS.gene050900	MS.gene20556	0.806989	6.29E-50	-1.69E-46
MS.gene050900	MS.gene23009	0.812984	3.22E-51	-1.69E-46
MS.gene050900	MS.gene23111	0.804491	2.11E-49	-1.69E-46
MS.gene050900	MS.gene23318	0.80731	5.38E-50	-1.69E-46
MS.gene050900	MS.gene24158	0.813443	2.55E-51	-1.69E-46
MS.gene050900	MS.gene24772	0.81819	2.23E-52	-1.69E-46
MS.gene050900	MS.gene25859	0.801874	7.33E-49	-1.69E-46
MS.gene050900	MS.gene26514	0.810484	1.13E-50	-1.69E-46
MS.gene050900	MS.gene26693	0.8167	4.83E-52	-1.69E-46
MS.gene050900	MS.gene28693	0.810758	9.83E-51	-1.69E-46
MS.gene050900	MS.gene28694	0.83045	2.92E-55	-1.69E-46
MS.gene050900	MS.gene31609	0.816989	4.16E-52	-1.69E-46
MS.gene050900	MS.gene31671	0.805783	1.13E-49	-1.69E-46
MS.gene050900	MS.gene34220	0.83838	2.98E-57	-1.69E-46
MS.gene050900	MS.gene34800	0.807857	4.12E-50	-1.69E-46
MS.gene050900	MS.gene37910	0.830493	2.85E-55	-1.69E-46
MS.gene050900	MS.gene39638	0.813934	1.99E-51	-1.69E-46
MS.gene050900	MS.gene39912	0.805712	1.17E-49	-1.69E-46
MS.gene050900	MS.gene40169	0.809833	1.56E-50	-1.69E-46
MS.gene050900	MS.gene40773	0.803427	3.50E-49	-1.69E-46
MS.gene050900	MS.gene42831	0.81514	1.08E-51	-1.69E-46
MS.gene050900	MS.gene43782	0.84142	4.80E-58	-1.69E-46
MS.gene050900	MS.gene45170	0.803914	2.78E-49	-1.69E-46
MS.gene050900	MS.gene49350	0.808787	2.61E-50	-1.69E-46
MS.gene050900	MS.gene50575	0.824793	6.66E-54	-1.69E-46
MS.gene050900	MS.gene58676	0.803331	3.67E-49	-1.69E-46
MS.gene050900	MS.gene59149	0.838373	2.99E-57	-1.69E-46
MS.gene050900	MS.gene62480	0.843688	1.20E-58	-1.69E-46
MS.gene050900	MS.gene64994	0.818774	1.65E-52	-1.69E-46
MS.gene050900	MS.gene65418	0.801702	7.95E-49	-1.69E-46
MS.gene050900	MS.gene66256	0.828097	1.09E-54	-1.69E-46
MS.gene050900	MS.gene68575	0.81508	1.11E-51	-1.69E-46
MS.gene050900	MS.gene68923	0.801657	8.12E-49	-1.69E-46
MS.gene050900	MS.gene75493	0.818507	1.89E-52	-1.69E-46
MS.gene050900	MS.gene78205	0.812533	4.04E-51	-1.69E-46
MS.gene050900	MS.gene79020	0.800642	1.31E-48	-1.69E-46
MS.gene050900	MS.gene81602	0.843569	1.29E-58	-1.69E-46
MS.gene050900	MS.gene84200	0.813429	2.57E-51	-1.69E-46
MS.gene050900	MS.gene84401	0.807144	5.83E-50	-1.69E-46
MS.gene050900	MS.gene88768	0.816954	4.24E-52	-1.69E-46
MS.gene050900	MS.gene93890	0.813983	1.94E-51	-1.69E-46
MS.gene050900	MS.gene97270	0.812943	3.29E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050900.t1	MTR_7g113110	94.362	337	15	3	22	356	31	365	0.0	536
MS.gene050900.t1	MTR_1g083310	33.578	408	196	16	14	356	5	402	7.32e-35	132
MS.gene050900.t1	MTR_1g107565	56.000	75	33	0	14	88	3	77	3.59e-22	96.7
MS.gene050900.t1	MTR_7g108560	50.617	81	36	1	12	88	6	86	2.83e-19	87.4
MS.gene050900.t1	MTR_2g022250	55.882	68	30	0	21	88	7	74	2.77e-18	86.3
MS.gene050900.t1	MTR_4g117220	52.055	73	35	0	21	93	7	79	1.90e-17	84.0
MS.gene050900.t1	MTR_4g117140	52.055	73	35	0	21	93	7	79	1.93e-17	84.0
MS.gene050900.t1	MTR_1g082650	52.941	68	32	0	21	88	7	74	7.00e-17	82.4
MS.gene050900.t1	MTR_2g436830	54.167	72	33	0	19	90	10	81	3.76e-15	75.5
MS.gene050900.t1	MTR_2g022240	54.412	68	31	0	21	88	7	74	6.66e-15	75.9
MS.gene050900.t1	MTR_1g092670	45.714	70	38	0	24	93	4	73	7.45e-14	66.6
MS.gene050900.t1	MTR_3g067750	43.478	69	39	0	19	87	7	75	1.79e-13	69.3
MS.gene050900.t1	MTR_2g018790	37.500	112	64	2	26	136	10	116	1.18e-12	68.2
MS.gene050900.t1	MTR_8g091420	50.000	62	31	0	28	89	33	94	3.11e-12	64.3
MS.gene050900.t1	MTR_3g087770	48.387	62	32	0	28	89	34	95	5.36e-12	63.5
MS.gene050900.t1	MTR_6g026890	38.710	62	38	0	28	89	20	81	6.67e-12	63.2
MS.gene050900.t1	MTR_3g073670	44.444	63	35	0	27	89	29	91	8.86e-12	62.8
MS.gene050900.t1	MTR_1g030630	41.935	62	36	0	28	89	29	90	2.65e-11	61.6
MS.gene050900.t1	MTR_3g117890	40.000	75	39	2	16	89	23	92	3.66e-11	61.2
MS.gene050900.t1	MTR_2g091235	47.541	61	32	0	28	88	6	66	3.66e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050900.t1	AT1G56210	32.011	353	192	10	24	356	40	364	1.71e-23	100
MS.gene050900.t1	AT5G27690	48.454	97	49	1	19	115	25	120	9.66e-22	95.1
MS.gene050900.t1	AT3G06130	52.941	68	32	0	21	88	7	74	3.90e-18	85.9
MS.gene050900.t1	AT3G06130	52.941	68	32	0	21	88	7	74	5.14e-18	84.3
MS.gene050900.t1	AT1G23000	48.000	75	39	0	14	88	3	77	9.07e-18	84.0
MS.gene050900.t1	AT1G23000	48.000	75	39	0	14	88	63	137	3.31e-17	82.8
MS.gene050900.t1	AT1G66240	41.791	67	39	0	22	88	31	97	5.07e-14	68.2
MS.gene050900.t1	AT3G05220	45.455	66	36	0	23	88	9	74	6.50e-14	73.2
MS.gene050900.t1	AT5G37860	46.970	66	35	0	23	88	9	74	1.83e-13	70.1
MS.gene050900.t1	AT5G19090	32.624	141	70	2	21	154	7	129	2.51e-13	71.6
MS.gene050900.t1	AT5G19090	32.624	141	70	2	21	154	7	129	2.51e-13	71.6
MS.gene050900.t1	AT5G19090	32.624	141	70	2	21	154	7	129	2.51e-13	71.6
MS.gene050900.t1	AT5G19090	32.624	141	70	2	21	154	7	129	2.79e-13	71.2
MS.gene050900.t1	AT5G19090	32.624	141	70	2	21	154	7	129	2.79e-13	71.2
MS.gene050900.t1	AT3G56891	38.571	70	43	0	20	89	12	81	3.02e-12	64.7
MS.gene050900.t1	AT3G56240	39.706	68	41	0	22	89	1	68	9.37e-12	62.0
MS.gene050900.t1	AT3G56240	39.706	68	41	0	22	89	1	68	9.37e-12	62.0
MS.gene050900.t1	AT1G06330	45.902	61	33	0	28	88	6	66	9.57e-12	62.8
MS.gene050900.t1	AT3G56891	41.379	58	34	0	32	89	1	58	5.51e-11	60.5

Find 102 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCCAGGACAAGTTTCATTTA+TGG	0.212169	7.1:+3268169	MS.gene050900:CDS
GGTCATGGGCCTTATGGGCC+TGG	0.225833	7.1:+3268140	MS.gene050900:CDS
ATGCATGGTCATGGGCCTTA+TGG	0.229042	7.1:+3268134	MS.gene050900:CDS
GGGCCTTATGGGCCTGGGTC+TGG	0.244736	7.1:+3268146	MS.gene050900:CDS
AAATTGTACACCGCCTCTTC+CGG	0.272718	7.1:-3267892	None:intergenic
GGTGGTGGTGGAAGGGGTGG+TGG	0.278444	7.1:+3267861	MS.gene050900:CDS
CCAGGACAAGTTTCATTTAT+GGG	0.278854	7.1:+3268170	MS.gene050900:CDS
GGTTGTAGCTGTTGTTCTTC+TGG	0.302379	7.1:-3267259	None:intergenic
AACCTCCTTCTTCCGGTGAT+TGG	0.318819	7.1:+3268099	MS.gene050900:CDS
CCATAACTCAGCTCGTTTAC+CGG	0.326210	7.1:-3267658	None:intergenic
TCCAGCCGGTAGCCAGTTAC+CGG	0.342016	7.1:+3267953	MS.gene050900:CDS
ATTTGTTACCATCTATGCTT+TGG	0.343245	7.1:-3267448	None:intergenic
TGCATGGTCATGGGCCTTAT+GGG	0.343259	7.1:+3268135	MS.gene050900:CDS
AAGGAGTGGAATTTACTATC+AGG	0.364428	7.1:+3268037	MS.gene050900:CDS
AATTGTACACCGCCTCTTCC+GGG	0.372292	7.1:-3267891	None:intergenic
CTACCGAAGGTGGTGGTGGA+AGG	0.383442	7.1:+3267853	MS.gene050900:CDS
CCCATAAATGAAACTTGTCC+TGG	0.384336	7.1:-3268170	None:intergenic
GTCATGGGCCTTATGGGCCT+GGG	0.388210	7.1:+3268141	MS.gene050900:CDS
TGATTTACCTTGCACATAAG+AGG	0.389371	7.1:-3267280	None:intergenic
ACTTTCGAACCTCCTTCTTC+CGG	0.401298	7.1:+3268092	MS.gene050900:CDS
TTCCGTGGTGGACTCTCATT+AGG	0.403542	7.1:-3268200	None:intergenic
CAACGAAAACGAAGCTGTTA+AGG	0.405982	7.1:+3267818	MS.gene050900:CDS
GTGGTGGAAGGGGTGGTGGA+TGG	0.408791	7.1:+3267865	MS.gene050900:CDS
GGTGGATGGCCACCCGGAAG+AGG	0.416601	7.1:+3267879	MS.gene050900:CDS
TCTTCTGGCGGTGGCGGTGG+CGG	0.421326	7.1:-3267244	None:intergenic
TATGGGCCTGGGTCTGGCCC+AGG	0.421646	7.1:+3268152	MS.gene050900:CDS
AAAGTTCTCCAAAGCATAGA+TGG	0.424961	7.1:+3267440	MS.gene050900:CDS
GGGCCAGACCCAGGCCCATA+AGG	0.427386	7.1:-3268149	None:intergenic
TTTCGTTGCCACCATCGGTC+TGG	0.428436	7.1:-3267803	None:intergenic
TCTGGCGGTGGCGGTGGCGG+TGG	0.430109	7.1:-3267241	None:intergenic
GAAGGTGGTGGTGGAAGGGG+TGG	0.432565	7.1:+3267858	MS.gene050900:CDS
ACCCCTTCCACCACCACCTT+CGG	0.446159	7.1:-3267856	None:intergenic
ACCGAAGGTGGTGGTGGAAG+GGG	0.451292	7.1:+3267855	MS.gene050900:CDS
CATGCAACCTTGACAATGAA+TGG	0.452710	7.1:-3267405	None:intergenic
CACATAACTGAGCAAGCATT+AGG	0.469098	7.1:-3268464	None:intergenic
ACCGGTAACTGGCTACCGGC+TGG	0.470086	7.1:-3267954	None:intergenic
TGTTCTTCTGGCGGTGGCGG+TGG	0.473990	7.1:-3267247	None:intergenic
TGCGTATAAGCGTATGAATA+CGG	0.475765	7.1:-3268344	None:intergenic
ATTAAGATACTAACACAAAC+CGG	0.495120	7.1:+3267639	MS.gene050900:CDS
CAGAATCAGATGCATGGTCA+TGG	0.495583	7.1:+3268125	MS.gene050900:CDS
TTCATCACTAAATAATTCAA+AGG	0.496216	7.1:-3268438	None:intergenic
GGTGGACTCTCATTAGGTGG+TGG	0.503750	7.1:-3268194	None:intergenic
TACCGAAGGTGGTGGTGGAA+GGG	0.506260	7.1:+3267854	MS.gene050900:CDS
TGTTGTTCTTCTGGCGGTGG+CGG	0.512934	7.1:-3267250	None:intergenic
CTCATAACATGTCTCACCTC+TGG	0.514228	7.1:-3267927	None:intergenic
AGGGGTGGTGGATGGCCACC+CGG	0.514999	7.1:+3267873	MS.gene050900:CDS
GACGGAGAAAGCAGTGATGA+AGG	0.519338	7.1:+3267777	MS.gene050900:CDS
CCACACACCGTAGGAGAAGC+TGG	0.521751	7.1:-3268251	None:intergenic
ACTTGTCCTGGGCCAGACCC+AGG	0.526706	7.1:-3268158	None:intergenic
CCGGTAAACGAGCTGAGTTA+TGG	0.526901	7.1:+3267658	MS.gene050900:CDS
TTTACTATCAGGGGCAAAGA+GGG	0.536147	7.1:+3268048	MS.gene050900:CDS
GTGGACTCTCATTAGGTGGT+GGG	0.543443	7.1:-3268193	None:intergenic
AGAGTCTCCATTCATTGTCA+AGG	0.543948	7.1:+3267398	MS.gene050900:CDS
AGCTGTTGTTCTTCTGGCGG+TGG	0.544196	7.1:-3267253	None:intergenic
ACAATCGCCATGGAGAATGC+GGG	0.544675	7.1:+3267993	MS.gene050900:CDS
GCACCGTATCTCATAGAAGT+AGG	0.547727	7.1:-3268296	None:intergenic
AGGAGTGGAATTTACTATCA+GGG	0.555508	7.1:+3268038	MS.gene050900:CDS
TGATTCCAATCACCGGAAGA+AGG	0.561560	7.1:-3268104	None:intergenic
AGAATCAGATGCATGGTCAT+GGG	0.564851	7.1:+3268126	MS.gene050900:CDS
TACAATCGCCATGGAGAATG+CGG	0.565300	7.1:+3267992	MS.gene050900:CDS
GTTTAACCCCGCATTCTCCA+TGG	0.567174	7.1:-3268000	None:intergenic
CTGATTCTGATTCCAATCAC+CGG	0.572547	7.1:-3268111	None:intergenic
CCAGCTTCTCCTACGGTGTG+TGG	0.578619	7.1:+3268251	MS.gene050900:CDS
GGATGGCCACCCGGAAGAGG+CGG	0.580046	7.1:+3267882	MS.gene050900:CDS
GAAGGTAACCAGACCGATGG+TGG	0.582367	7.1:+3267795	MS.gene050900:CDS
GCTGCTACCGAAGGTGGTGG+TGG	0.582434	7.1:+3267849	MS.gene050900:CDS
CCATAAATGAAACTTGTCCT+GGG	0.584326	7.1:-3268169	None:intergenic
TATCCTACTTCTATGAGATA+CGG	0.586254	7.1:+3268293	MS.gene050900:CDS
TGCAACCGGTAACTGGCTAC+CGG	0.591014	7.1:-3267958	None:intergenic
TAGTATCTTAATCAGTGTAT+CGG	0.600120	7.1:-3267628	None:intergenic
GTTGTTGTTGCTGCTACCGA+AGG	0.601315	7.1:+3267840	MS.gene050900:CDS
TCACGCACCAGCTTCTCCTA+CGG	0.604394	7.1:+3268244	MS.gene050900:CDS
AATCAGTGTATCGGTGTCGA+CGG	0.605481	7.1:-3267619	None:intergenic
GACGGTGGATACAGAAGGAG+TGG	0.605638	7.1:+3268023	MS.gene050900:CDS
CGTGGTGGACTCTCATTAGG+TGG	0.609935	7.1:-3268197	None:intergenic
GTTGTTGCTGCTACCGAAGG+TGG	0.610212	7.1:+3267843	MS.gene050900:CDS
ATTTACTATCAGGGGCAAAG+AGG	0.612674	7.1:+3268047	MS.gene050900:CDS
TGCGGTGGGTATTGATTCCG+TGG	0.613009	7.1:-3268215	None:intergenic
GTTGCTGCTACCGAAGGTGG+TGG	0.614150	7.1:+3267846	MS.gene050900:CDS
GTGTGGTGGAAACTTACATA+CGG	0.616399	7.1:+3268268	MS.gene050900:CDS
GCTACAACCTCTTATGTGCA+AGG	0.618097	7.1:+3267273	MS.gene050900:CDS
GTGCGTGATGATAATGCGGT+GGG	0.627112	7.1:-3268229	None:intergenic
TGGAATCAGAATCAGATGCA+TGG	0.628714	7.1:+3268119	MS.gene050900:CDS
GGAGTGGAATTTACTATCAG+GGG	0.634481	7.1:+3268039	MS.gene050900:CDS
GGGCAAAGAGGGAATAGTGA+AGG	0.637760	7.1:+3268059	MS.gene050900:CDS
AAGAAACCAAAACCAGAGAA+CGG	0.639417	7.1:+3267729	MS.gene050900:CDS
GCTTCTCCTACGGTGTGTGG+TGG	0.640745	7.1:+3268254	MS.gene050900:CDS
CAATCGCCATGGAGAATGCG+GGG	0.645930	7.1:+3267994	MS.gene050900:CDS
TAAACGACGGTGGATACAGA+AGG	0.652147	7.1:+3268018	MS.gene050900:CDS
TGTAGCTGTTGTTCTTCTGG+CGG	0.652651	7.1:-3267256	None:intergenic
TTCCAATCACCGGAAGAAGG+AGG	0.665191	7.1:-3268101	None:intergenic
GGTGCGTGATGATAATGCGG+TGG	0.667198	7.1:-3268230	None:intergenic
ATTTCAAGAAATAAAGCCAG+AGG	0.668070	7.1:+3267911	MS.gene050900:CDS
GATGAAGGTAACCAGACCGA+TGG	0.668071	7.1:+3267792	MS.gene050900:CDS
ACAGATCAGAAACAGAGTGA+CGG	0.668136	7.1:+3267759	MS.gene050900:CDS
AATGCGGGGTTAAACGACGG+TGG	0.700799	7.1:+3268008	MS.gene050900:CDS
AAGTTTCCACCACACACCGT+AGG	0.702698	7.1:-3268260	None:intergenic
GAGAATGCGGGGTTAAACGA+CGG	0.713153	7.1:+3268005	MS.gene050900:CDS
TGTACACCGCCTCTTCCGGG+TGG	0.716335	7.1:-3267888	None:intergenic
GCTGGTGCGTGATGATAATG+CGG	0.741467	7.1:-3268233	None:intergenic
CACCTAATGAGAGTCCACCA+CGG	0.748035	7.1:+3268198	MS.gene050900:CDS
GGTGGGTATTGATTCCGTGG+TGG	0.773674	7.1:-3268212	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATGAAAGAGAGTTATTAAAA+CGG	-	chr7.1:3267330-3267349	None:intergenic	20.0%
!!	TTCATCACTAAATAATTCAA+AGG	-	chr7.1:3268441-3268460	None:intergenic	20.0%
!!!	TTTTTCTTCTTCTTTTTGAT+TGG	-	chr7.1:3267696-3267715	None:intergenic	20.0%
!	ATTAAGATACTAACACAAAC+CGG	+	chr7.1:3267639-3267658	MS.gene050900:CDS	25.0%
!	CAACAAAAAGTAGAAGTAAA+GGG	+	chr7.1:3267594-3267613	MS.gene050900:CDS	25.0%
!	TAGTATCTTAATCAGTGTAT+CGG	-	chr7.1:3267631-3267650	None:intergenic	25.0%
	ATTTCAAGAAATAAAGCCAG+AGG	+	chr7.1:3267911-3267930	MS.gene050900:CDS	30.0%
	GCAACAAAAAGTAGAAGTAA+AGG	+	chr7.1:3267593-3267612	MS.gene050900:CDS	30.0%
	TATCCTACTTCTATGAGATA+CGG	+	chr7.1:3268293-3268312	MS.gene050900:CDS	30.0%
!	ATTTGTTACCATCTATGCTT+TGG	-	chr7.1:3267451-3267470	None:intergenic	30.0%
!	CTATGTTCATTTGTTAACTC+AGG	+	chr7.1:3267543-3267562	MS.gene050900:intron	30.0%
!!	AAGTCATGATTTTGATGACT+CGG	+	chr7.1:3268370-3268389	MS.gene050900:CDS	30.0%
!!!	TTTTTGATTGGTTCTGTATC+AGG	-	chr7.1:3267684-3267703	None:intergenic	30.0%
	AAAGTTCTCCAAAGCATAGA+TGG	+	chr7.1:3267440-3267459	MS.gene050900:CDS	35.0%
	AAGAAACCAAAACCAGAGAA+CGG	+	chr7.1:3267729-3267748	MS.gene050900:CDS	35.0%
	AAGGAGTGGAATTTACTATC+AGG	+	chr7.1:3268037-3268056	MS.gene050900:CDS	35.0%
	AGGAGTGGAATTTACTATCA+GGG	+	chr7.1:3268038-3268057	MS.gene050900:CDS	35.0%
	CCAGGACAAGTTTCATTTAT+GGG	+	chr7.1:3268170-3268189	MS.gene050900:CDS	35.0%
	CCATAAATGAAACTTGTCCT+GGG	-	chr7.1:3268172-3268191	None:intergenic	35.0%
	GAAAAAAGTTACAATCGCCA+TGG	+	chr7.1:3267983-3268002	MS.gene050900:CDS	35.0%
	TGATTTACCTTGCACATAAG+AGG	-	chr7.1:3267283-3267302	None:intergenic	35.0%
	TGCGTATAAGCGTATGAATA+CGG	-	chr7.1:3268347-3268366	None:intergenic	35.0%
!!!	GTAACTTTTTTCTCTGCAAC+CGG	-	chr7.1:3267975-3267994	None:intergenic	35.0%
	ACAGATCAGAAACAGAGTGA+CGG	+	chr7.1:3267759-3267778	MS.gene050900:CDS	40.0%
	AGAATCAGATGCATGGTCAT+GGG	+	chr7.1:3268126-3268145	MS.gene050900:CDS	40.0%
	AGAGTCTCCATTCATTGTCA+AGG	+	chr7.1:3267398-3267417	MS.gene050900:CDS	40.0%
	ATTTACTATCAGGGGCAAAG+AGG	+	chr7.1:3268047-3268066	MS.gene050900:CDS	40.0%
	CAACGAAAACGAAGCTGTTA+AGG	+	chr7.1:3267818-3267837	MS.gene050900:CDS	40.0%
	CACATAACTGAGCAAGCATT+AGG	-	chr7.1:3268467-3268486	None:intergenic	40.0%
	CATGCAACCTTGACAATGAA+TGG	-	chr7.1:3267408-3267427	None:intergenic	40.0%
	CCCAGGACAAGTTTCATTTA+TGG	+	chr7.1:3268169-3268188	MS.gene050900:CDS	40.0%
	CCCATAAATGAAACTTGTCC+TGG	-	chr7.1:3268173-3268192	None:intergenic	40.0%
	CTGATTCTGATTCCAATCAC+CGG	-	chr7.1:3268114-3268133	None:intergenic	40.0%
	GGAGTGGAATTTACTATCAG+GGG	+	chr7.1:3268039-3268058	MS.gene050900:CDS	40.0%
	GTTATTAAAACGGCATGCAG+AGG	-	chr7.1:3267320-3267339	None:intergenic	40.0%
	TGGAATCAGAATCAGATGCA+TGG	+	chr7.1:3268119-3268138	MS.gene050900:CDS	40.0%
	TTTACTATCAGGGGCAAAGA+GGG	+	chr7.1:3268048-3268067	MS.gene050900:CDS	40.0%
!	CATGTTATGAGTTTTCCAGC+CGG	+	chr7.1:3267939-3267958	MS.gene050900:CDS	40.0%
!	GTGTGGTGGAAACTTACATA+CGG	+	chr7.1:3268268-3268287	MS.gene050900:CDS	40.0%
!!	TTTTGACCGTTCTCTGGTTT+TGG	-	chr7.1:3267738-3267757	None:intergenic	40.0%
	AAATTGTACACCGCCTCTTC+CGG	-	chr7.1:3267895-3267914	None:intergenic	45.0%
	ACTTTCGAACCTCCTTCTTC+CGG	+	chr7.1:3268092-3268111	MS.gene050900:CDS	45.0%
	CAGAATCAGATGCATGGTCA+TGG	+	chr7.1:3268125-3268144	MS.gene050900:CDS	45.0%
	CCATAACTCAGCTCGTTTAC+CGG	-	chr7.1:3267661-3267680	None:intergenic	45.0%
	CTCATAACATGTCTCACCTC+TGG	-	chr7.1:3267930-3267949	None:intergenic	45.0%
	GCACCGTATCTCATAGAAGT+AGG	-	chr7.1:3268299-3268318	None:intergenic	45.0%
	GCTACAACCTCTTATGTGCA+AGG	+	chr7.1:3267273-3267292	MS.gene050900:CDS	45.0%
	GGTTGTAGCTGTTGTTCTTC+TGG	-	chr7.1:3267262-3267281	None:intergenic	45.0%
	TAAACGACGGTGGATACAGA+AGG	+	chr7.1:3268018-3268037	MS.gene050900:CDS	45.0%
	TACAATCGCCATGGAGAATG+CGG	+	chr7.1:3267992-3268011	MS.gene050900:CDS	45.0%
	TGATTCCAATCACCGGAAGA+AGG	-	chr7.1:3268107-3268126	None:intergenic	45.0%
	TGTAGCTGTTGTTCTTCTGG+CGG	-	chr7.1:3267259-3267278	None:intergenic	45.0%
!	TTCGTTTTCGTTGCCACCAT+CGG	-	chr7.1:3267811-3267830	None:intergenic	45.0%
!	TTTTCTCTGCAACCGGTAAC+TGG	-	chr7.1:3267968-3267987	None:intergenic	45.0%
!!	AATCAGTGTATCGGTGTCGA+CGG	-	chr7.1:3267622-3267641	None:intergenic	45.0%
!!!	TCTGTGTTTTGACCGTTCTC+TGG	-	chr7.1:3267744-3267763	None:intergenic	45.0%
	AACCTCCTTCTTCCGGTGAT+TGG	+	chr7.1:3268099-3268118	MS.gene050900:CDS	50.0%
	AAGTTTCCACCACACACCGT+AGG	-	chr7.1:3268263-3268282	None:intergenic	50.0%
	AATTGTACACCGCCTCTTCC+GGG	-	chr7.1:3267894-3267913	None:intergenic	50.0%
	ACAATCGCCATGGAGAATGC+GGG	+	chr7.1:3267993-3268012	MS.gene050900:CDS	50.0%
	ATGCATGGTCATGGGCCTTA+TGG	+	chr7.1:3268134-3268153	MS.gene050900:CDS	50.0%
	CACCTAATGAGAGTCCACCA+CGG	+	chr7.1:3268198-3268217	MS.gene050900:CDS	50.0%
	CCGGTAAACGAGCTGAGTTA+TGG	+	chr7.1:3267658-3267677	MS.gene050900:CDS	50.0%
	GACGGAGAAAGCAGTGATGA+AGG	+	chr7.1:3267777-3267796	MS.gene050900:CDS	50.0%
	GAGAATGCGGGGTTAAACGA+CGG	+	chr7.1:3268005-3268024	MS.gene050900:CDS	50.0%
	GATGAAGGTAACCAGACCGA+TGG	+	chr7.1:3267792-3267811	MS.gene050900:CDS	50.0%
	GGGCAAAGAGGGAATAGTGA+AGG	+	chr7.1:3268059-3268078	MS.gene050900:CDS	50.0%
	GTGGACTCTCATTAGGTGGT+GGG	-	chr7.1:3268196-3268215	None:intergenic	50.0%
	GTTTAACCCCGCATTCTCCA+TGG	-	chr7.1:3268003-3268022	None:intergenic	50.0%
	TTCCAATCACCGGAAGAAGG+AGG	-	chr7.1:3268104-3268123	None:intergenic	50.0%
!	GCTGGTGCGTGATGATAATG+CGG	-	chr7.1:3268236-3268255	None:intergenic	50.0%
!	GTGCGTGATGATAATGCGGT+GGG	-	chr7.1:3268232-3268251	None:intergenic	50.0%
!	GTTGTTGTTGCTGCTACCGA+AGG	+	chr7.1:3267840-3267859	MS.gene050900:CDS	50.0%
!	TGCATGGTCATGGGCCTTAT+GGG	+	chr7.1:3268135-3268154	MS.gene050900:CDS	50.0%
!!	TTCCGTGGTGGACTCTCATT+AGG	-	chr7.1:3268203-3268222	None:intergenic	50.0%
	AATGCGGGGTTAAACGACGG+TGG	+	chr7.1:3268008-3268027	MS.gene050900:CDS	55.0%
	AGCTGTTGTTCTTCTGGCGG+TGG	-	chr7.1:3267256-3267275	None:intergenic	55.0%
	CAATCGCCATGGAGAATGCG+GGG	+	chr7.1:3267994-3268013	MS.gene050900:CDS	55.0%
	GAAGGTAACCAGACCGATGG+TGG	+	chr7.1:3267795-3267814	MS.gene050900:CDS	55.0%
	GACGGTGGATACAGAAGGAG+TGG	+	chr7.1:3268023-3268042	MS.gene050900:CDS	55.0%
	GTTGTTGCTGCTACCGAAGG+TGG	+	chr7.1:3267843-3267862	MS.gene050900:CDS	55.0%
	TCACGCACCAGCTTCTCCTA+CGG	+	chr7.1:3268244-3268263	MS.gene050900:CDS	55.0%
	TGCAACCGGTAACTGGCTAC+CGG	-	chr7.1:3267961-3267980	None:intergenic	55.0%
	TGTTGTTCTTCTGGCGGTGG+CGG	-	chr7.1:3267253-3267272	None:intergenic	55.0%
	TTTCGTTGCCACCATCGGTC+TGG	-	chr7.1:3267806-3267825	None:intergenic	55.0%
!	GGTGCGTGATGATAATGCGG+TGG	-	chr7.1:3268233-3268252	None:intergenic	55.0%
!	GGTGGACTCTCATTAGGTGG+TGG	-	chr7.1:3268197-3268216	None:intergenic	55.0%
!!	CGTGGTGGACTCTCATTAGG+TGG	-	chr7.1:3268200-3268219	None:intergenic	55.0%
!!	GGTGGGTATTGATTCCGTGG+TGG	-	chr7.1:3268215-3268234	None:intergenic	55.0%
!!	TACCGAAGGTGGTGGTGGAA+GGG	+	chr7.1:3267854-3267873	MS.gene050900:CDS	55.0%
!!	TGCGGTGGGTATTGATTCCG+TGG	-	chr7.1:3268218-3268237	None:intergenic	55.0%
	ACCCCTTCCACCACCACCTT+CGG	-	chr7.1:3267859-3267878	None:intergenic	60.0%
	CCACACACCGTAGGAGAAGC+TGG	-	chr7.1:3268254-3268273	None:intergenic	60.0%
	CCAGCTTCTCCTACGGTGTG+TGG	+	chr7.1:3268251-3268270	MS.gene050900:CDS	60.0%
	GCTTCTCCTACGGTGTGTGG+TGG	+	chr7.1:3268254-3268273	MS.gene050900:CDS	60.0%
	GTTGCTGCTACCGAAGGTGG+TGG	+	chr7.1:3267846-3267865	MS.gene050900:CDS	60.0%
	TCCAGCCGGTAGCCAGTTAC+CGG	+	chr7.1:3267953-3267972	MS.gene050900:CDS	60.0%
!	GTCATGGGCCTTATGGGCCT+GGG	+	chr7.1:3268141-3268160	MS.gene050900:CDS	60.0%
!!	ACCGAAGGTGGTGGTGGAAG+GGG	+	chr7.1:3267855-3267874	MS.gene050900:CDS	60.0%
!!	CTACCGAAGGTGGTGGTGGA+AGG	+	chr7.1:3267853-3267872	MS.gene050900:CDS	60.0%
	ACCGGTAACTGGCTACCGGC+TGG	-	chr7.1:3267957-3267976	None:intergenic	65.0%
	ACTTGTCCTGGGCCAGACCC+AGG	-	chr7.1:3268161-3268180	None:intergenic	65.0%
	TGTACACCGCCTCTTCCGGG+TGG	-	chr7.1:3267891-3267910	None:intergenic	65.0%
!	GCTGCTACCGAAGGTGGTGG+TGG	+	chr7.1:3267849-3267868	MS.gene050900:CDS	65.0%
!	GGTCATGGGCCTTATGGGCC+TGG	+	chr7.1:3268140-3268159	MS.gene050900:CDS	65.0%
!	TGTTCTTCTGGCGGTGGCGG+TGG	-	chr7.1:3267250-3267269	None:intergenic	65.0%
!!	GAAGGTGGTGGTGGAAGGGG+TGG	+	chr7.1:3267858-3267877	MS.gene050900:CDS	65.0%
!!	GTGGTGGAAGGGGTGGTGGA+TGG	+	chr7.1:3267865-3267884	MS.gene050900:CDS	65.0%
	GGATGGCCACCCGGAAGAGG+CGG	+	chr7.1:3267882-3267901	MS.gene050900:CDS	70.0%
	GGGCCAGACCCAGGCCCATA+AGG	-	chr7.1:3268152-3268171	None:intergenic	70.0%
	GGTGGATGGCCACCCGGAAG+AGG	+	chr7.1:3267879-3267898	MS.gene050900:CDS	70.0%
	TATGGGCCTGGGTCTGGCCC+AGG	+	chr7.1:3268152-3268171	MS.gene050900:CDS	70.0%
!	GGGCCTTATGGGCCTGGGTC+TGG	+	chr7.1:3268146-3268165	MS.gene050900:CDS	70.0%
!	TCTTCTGGCGGTGGCGGTGG+CGG	-	chr7.1:3267247-3267266	None:intergenic	70.0%
!!	AGGGGTGGTGGATGGCCACC+CGG	+	chr7.1:3267873-3267892	MS.gene050900:CDS	70.0%
!!	GGTGGTGGTGGAAGGGGTGG+TGG	+	chr7.1:3267861-3267880	MS.gene050900:CDS	70.0%
!!	TCTGGCGGTGGCGGTGGCGG+TGG	-	chr7.1:3267244-3267263	None:intergenic	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.1	gene	3267223	3268487	3267223	ID=MS.gene050900
chr7.1	mRNA	3267223	3268487	3267223	ID=MS.gene050900.t1;Parent=MS.gene050900
chr7.1	exon	3267223	3267294	3267223	ID=MS.gene050900.t1.exon1;Parent=MS.gene050900.t1
chr7.1	CDS	3267223	3267294	3267223	ID=cds.MS.gene050900.t1;Parent=MS.gene050900.t1
chr7.1	exon	3267386	3267461	3267386	ID=MS.gene050900.t1.exon2;Parent=MS.gene050900.t1
chr7.1	CDS	3267386	3267461	3267386	ID=cds.MS.gene050900.t1;Parent=MS.gene050900.t1
chr7.1	exon	3267565	3268487	3267565	ID=MS.gene050900.t1.exon3;Parent=MS.gene050900.t1
chr7.1	CDS	3267565	3268487	3267565	ID=cds.MS.gene050900.t1;Parent=MS.gene050900.t1

Gene Sequence

>MS.gene050900

ATGGAAGCAACAGAAACACCACCGCCACCGCCACCGCCAGAAGAACAACAGCTACAACCTCTTATGTGCAAGGTAAATCAAACATTCATTCATTCCTCTGCATGCCGTTTTAATAACTCTCTTTCATTACTTCTAACATACGTTTCTGTTCTTGTTCTTTCAGAGCTGTACGTTAAGAGTCTCCATTCATTGTCAAGGTTGCATGAGAAAAGTCAAAAAAGTTCTCCAAAGCATAGATGGTAACAAATCAATGACATTCAAAAGTCAAAACTCAATATCTATATATTATTTTTTGTTTTCATTTCACGACTTTGTTAATACTATGTTCATTTGTTAACTCAGGTGTTTATCAAACAACTATTGATTTGAAGCAACAAAAAGTAGAAGTAAAGGGCACCGTCGACACCGATACACTGATTAAGATACTAACACAAACCGGTAAACGAGCTGAGTTATGGCCTGATACAGAACCAATCAAAAAGAAGAAGAAAAAGAAGAAGAAAAAGAAGAAACCAAAACCAGAGAACGGTCAAAACACAGATCAGAAACAGAGTGACGGAGAAAGCAGTGATGAAGGTAACCAGACCGATGGTGGCAACGAAAACGAAGCTGTTAAGGTTGTTGTTGCTGCTACCGAAGGTGGTGGTGGAAGGGGTGGTGGATGGCCACCCGGAAGAGGCGGTGTACAATTTCAAGAAATAAAGCCAGAGGTGAGACATGTTATGAGTTTTCCAGCCGGTAGCCAGTTACCGGTTGCAGAGAAAAAAGTTACAATCGCCATGGAGAATGCGGGGTTAAACGACGGTGGATACAGAAGGAGTGGAATTTACTATCAGGGGCAAAGAGGGAATAGTGAAGGTTTAAATGTTACTTTCGAACCTCCTTCTTCCGGTGATTGGAATCAGAATCAGATGCATGGTCATGGGCCTTATGGGCCTGGGTCTGGCCCAGGACAAGTTTCATTTATGGGCCCACCACCTAATGAGAGTCCACCACGGAATCAATACCCACCGCATTATCATCACGCACCAGCTTCTCCTACGGTGTGTGGTGGAAACTTACATACGGCGTATCCTACTTCTATGAGATACGGTGCATCGTATTGTACTTCGTCTTCACAACCGTATTCATACGCTTATACGCATCAAAGTCATGATTTTGATGACTCGGAATCTTATACTTATACTACATCATCTCGTTCACGTACGTCAAATTCCTTTGAATTATTTAGTGATGAAAATCCTAATGCTTGCTCAGTTATGTGA

Protein sequence

>MS.gene050900.t1

MEATETPPPPPPPEEQQLQPLMCKSCTLRVSIHCQGCMRKVKKVLQSIDGVYQTTIDLKQQKVEVKGTVDTDTLIKILTQTGKRAELWPDTEPIKKKKKKKKKKKKPKPENGQNTDQKQSDGESSDEGNQTDGGNENEAVKVVVAATEGGGGRGGGWPPGRGGVQFQEIKPEVRHVMSFPAGSQLPVAEKKVTIAMENAGLNDGGYRRSGIYYQGQRGNSEGLNVTFEPPSSGDWNQNQMHGHGPYGPGSGPGQVSFMGPPPNESPPRNQYPPHYHHAPASPTVCGGNLHTAYPTSMRYGASYCTSSSQPYSYAYTHQSHDFDDSESYTYTTSSRSRTSNSFELFSDENPNACSVM