Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27359.t1 | XP_003589303.2 | 91.9 | 469 | 37 | 1 | 1 | 468 | 1 | 469 | 2.60E-220 | 774.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27359.t1 | G7I5A2 | 91.9 | 469 | 37 | 1 | 1 | 468 | 1 | 469 | 1.8e-220 | 774.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene27359 | 0.819813 | 9.53E-53 | -1.69E-46 |
| MS.gene049190 | MS.gene27359 | 0.810486 | 1.13E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene27359 | 0.810681 | 1.02E-50 | -1.69E-46 |
| MS.gene049807 | MS.gene27359 | 0.820927 | 5.30E-53 | -1.69E-46 |
| MS.gene049850 | MS.gene27359 | 0.813674 | 2.27E-51 | -1.69E-46 |
| MS.gene05045 | MS.gene27359 | 0.803092 | 4.11E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene27359 | 0.803863 | 2.85E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene27359 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene051720 | MS.gene27359 | 0.802302 | 5.98E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene27359 | 0.822914 | 1.84E-53 | -1.69E-46 |
| MS.gene052516 | MS.gene27359 | 0.844388 | 7.80E-59 | -1.69E-46 |
| MS.gene052584 | MS.gene27359 | 0.804182 | 2.44E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene27359 | 0.823375 | 1.43E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene27359 | 0.802309 | 5.96E-49 | -1.69E-46 |
| MS.gene053122 | MS.gene27359 | 0.817501 | 3.19E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene27359 | 0.856853 | 2.43E-62 | -1.69E-46 |
| MS.gene053226 | MS.gene27359 | 0.846393 | 2.23E-59 | -1.69E-46 |
| MS.gene053599 | MS.gene27359 | 0.805429 | 1.34E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene27359 | 0.818856 | 1.58E-52 | -1.69E-46 |
| MS.gene054584 | MS.gene27359 | 0.842433 | 2.59E-58 | -1.69E-46 |
| MS.gene054651 | MS.gene27359 | 0.815265 | 1.01E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene27359 | 0.809751 | 1.62E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene27359 | 0.818117 | 2.32E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene27359 | 0.807383 | 5.19E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene27359 | 0.823596 | 1.27E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene27359 | 0.800139 | 1.66E-48 | -1.69E-46 |
| MS.gene055580 | MS.gene27359 | -0.825229 | 5.25E-54 | -1.69E-46 |
| MS.gene056308 | MS.gene27359 | 0.810485 | 1.13E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene27359 | 0.821373 | 4.18E-53 | -1.69E-46 |
| MS.gene057444 | MS.gene27359 | 0.811805 | 5.82E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene27359 | 0.81666 | 4.93E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene27359 | 0.819784 | 9.68E-53 | -1.69E-46 |
| MS.gene060587 | MS.gene27359 | 0.819428 | 1.17E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene27359 | 0.80294 | 4.42E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27359.t1 | MTR_1g021670 | 97.234 | 470 | 10 | 2 | 1 | 468 | 1 | 469 | 0.0 | 939 |
| MS.gene27359.t1 | MTR_8g055930 | 41.528 | 301 | 160 | 5 | 174 | 459 | 161 | 460 | 1.83e-72 | 236 |
| MS.gene27359.t1 | MTR_1g096320 | 40.000 | 305 | 160 | 6 | 174 | 459 | 389 | 689 | 7.35e-67 | 227 |
| MS.gene27359.t1 | MTR_1g096320 | 40.000 | 305 | 160 | 6 | 174 | 459 | 395 | 695 | 8.71e-67 | 227 |
| MS.gene27359.t1 | MTR_4g088785 | 39.806 | 309 | 171 | 6 | 174 | 468 | 166 | 473 | 2.03e-63 | 214 |
| MS.gene27359.t1 | MTR_8g085850 | 37.075 | 294 | 180 | 3 | 173 | 462 | 149 | 441 | 2.00e-62 | 211 |
| MS.gene27359.t1 | MTR_8g085850 | 37.075 | 294 | 180 | 3 | 173 | 462 | 158 | 450 | 2.29e-62 | 211 |
| MS.gene27359.t1 | MTR_8g085850 | 36.333 | 300 | 180 | 4 | 173 | 462 | 149 | 447 | 6.30e-60 | 204 |
| MS.gene27359.t1 | MTR_2g085170 | 40.132 | 304 | 156 | 9 | 174 | 459 | 227 | 522 | 1.53e-59 | 205 |
| MS.gene27359.t1 | MTR_2g013690 | 38.851 | 296 | 170 | 5 | 174 | 459 | 206 | 500 | 2.07e-59 | 204 |
| MS.gene27359.t1 | MTR_8g055930 | 41.204 | 216 | 119 | 3 | 174 | 382 | 161 | 375 | 3.33e-51 | 179 |
| MS.gene27359.t1 | MTR_2g019450 | 32.993 | 294 | 182 | 9 | 164 | 447 | 107 | 395 | 4.23e-38 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27359.t1 | AT5G42660 | 64.831 | 472 | 148 | 4 | 1 | 466 | 1 | 460 | 0.0 | 626 |
| MS.gene27359.t1 | AT2G02910 | 39.769 | 347 | 189 | 6 | 130 | 465 | 118 | 455 | 1.71e-75 | 244 |
| MS.gene27359.t1 | AT2G02910 | 39.769 | 347 | 189 | 6 | 130 | 465 | 118 | 455 | 1.71e-75 | 244 |
| MS.gene27359.t1 | AT4G38500 | 33.333 | 447 | 253 | 10 | 23 | 462 | 38 | 446 | 1.41e-69 | 230 |
| MS.gene27359.t1 | AT1G34550 | 40.000 | 305 | 160 | 6 | 174 | 459 | 327 | 627 | 2.20e-68 | 230 |
| MS.gene27359.t1 | AT1G34550 | 40.000 | 305 | 160 | 6 | 174 | 459 | 421 | 721 | 4.77e-68 | 231 |
| MS.gene27359.t1 | AT4G09630 | 39.677 | 310 | 164 | 6 | 174 | 464 | 381 | 686 | 1.34e-66 | 226 |
| MS.gene27359.t1 | AT4G09630 | 39.677 | 310 | 164 | 6 | 174 | 464 | 396 | 701 | 1.78e-66 | 226 |
| MS.gene27359.t1 | AT1G53040 | 41.077 | 297 | 163 | 5 | 174 | 459 | 187 | 482 | 1.77e-64 | 218 |
| MS.gene27359.t1 | AT1G53040 | 41.077 | 297 | 163 | 5 | 174 | 459 | 187 | 482 | 1.77e-64 | 218 |
| MS.gene27359.t1 | AT1G53040 | 41.077 | 297 | 163 | 5 | 174 | 459 | 187 | 482 | 1.77e-64 | 218 |
| MS.gene27359.t1 | AT1G53040 | 41.438 | 292 | 159 | 5 | 174 | 454 | 187 | 477 | 2.87e-64 | 216 |
| MS.gene27359.t1 | AT1G53040 | 41.438 | 292 | 159 | 5 | 174 | 454 | 187 | 477 | 2.87e-64 | 216 |
| MS.gene27359.t1 | AT1G28240 | 39.465 | 299 | 164 | 7 | 174 | 459 | 214 | 508 | 5.72e-61 | 209 |
| MS.gene27359.t1 | AT1G53040 | 40.465 | 215 | 120 | 3 | 174 | 381 | 187 | 400 | 1.07e-44 | 162 |
| MS.gene27359.t1 | AT5G46220 | 30.345 | 290 | 188 | 7 | 153 | 432 | 97 | 382 | 5.43e-36 | 139 |
Find 97 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAAGCAAAATACTCTATT+TGG | 0.077140 | 1.2:+2897292 | MS.gene27359:CDS |
| CTAGTGGGTCCCTCCTAAAT+TGG | 0.222026 | 1.2:-2897329 | None:intergenic |
| AGAAGCTTCTTGTTAAATAC+TGG | 0.261001 | 1.2:+2894767 | MS.gene27359:CDS |
| TTCAACCTTTGATCAGAAAA+AGG | 0.262613 | 1.2:-2896960 | None:intergenic |
| CCTGTAGACAAGAGATTTAA+TGG | 0.266147 | 1.2:+2897516 | MS.gene27359:CDS |
| AATTAGTGGGTCGCAGAGTT+AGG | 0.305717 | 1.2:+2896889 | MS.gene27359:CDS |
| TATCTCTTTCCTCAAATGTT+TGG | 0.307680 | 1.2:-2896403 | None:intergenic |
| TACCGAGTTTCTTTCGTTTA+CGG | 0.350045 | 1.2:-2894729 | None:intergenic |
| GCGACTGATGCGTCTTTAAT+AGG | 0.361138 | 1.2:+2896317 | MS.gene27359:CDS |
| GTTAGGGATAATGGATTTGT+TGG | 0.361543 | 1.2:+2896906 | MS.gene27359:CDS |
| AGGTTTGCTATGTAGCATTC+TGG | 0.362293 | 1.2:+2896841 | MS.gene27359:intron |
| GTGGCGTGTTATTGTCGTTC+AGG | 0.366914 | 1.2:+2896932 | MS.gene27359:CDS |
| GTTGTATCTACTTGTGCATT+TGG | 0.368333 | 1.2:+2896680 | MS.gene27359:CDS |
| TAGACTCCAAGTCCCAATTT+AGG | 0.368651 | 1.2:+2897316 | MS.gene27359:CDS |
| CCATTAAATCTCTTGTCTAC+AGG | 0.375251 | 1.2:-2897516 | None:intergenic |
| ACGAGCTCCATGTTCTGATA+TGG | 0.376444 | 1.2:-2897394 | None:intergenic |
| TTCAACCGCCACAGAACATA+TGG | 0.378529 | 1.2:-2897937 | None:intergenic |
| GAAGAATCTAGTTTACCTAT+TGG | 0.384777 | 1.2:+2896275 | MS.gene27359:CDS |
| ACTAAAAGCGCAGGAATTAG+TGG | 0.395475 | 1.2:+2896875 | MS.gene27359:CDS |
| GGTCGCAGAGTTAGGGATAA+TGG | 0.396058 | 1.2:+2896897 | MS.gene27359:CDS |
| TCAAGCAAAATACTCTATTT+GGG | 0.399723 | 1.2:+2897293 | MS.gene27359:CDS |
| CCTACTACTCATGTTGTTGC+TGG | 0.399883 | 1.2:+2894961 | MS.gene27359:CDS |
| CTAATCTATTGATGTGCGTC+TGG | 0.401746 | 1.2:+2897869 | MS.gene27359:CDS |
| ACAGTGCGAATGGTGGGTTT+AGG | 0.412123 | 1.2:+2896615 | MS.gene27359:CDS |
| AGTTGCACTTCAACTTCCTC+TGG | 0.414058 | 1.2:-2897468 | None:intergenic |
| AAGAGATTTAATGGAAAGAA+AGG | 0.439466 | 1.2:+2897525 | MS.gene27359:CDS |
| TGTCTGCACTCGCAAGGATC+TGG | 0.451591 | 1.2:+2897987 | MS.gene27359:CDS |
| GTGTGTTGGAAGCGCTCCTT+TGG | 0.451902 | 1.2:+2897352 | MS.gene27359:CDS |
| AGGTGGTTCGCTTCACGTCT+AGG | 0.456871 | 1.2:+2897899 | MS.gene27359:CDS |
| TAGTGGGTCCCTCCTAAATT+GGG | 0.459505 | 1.2:-2897328 | None:intergenic |
| TACTGGAAACCAAACATTTG+AGG | 0.460309 | 1.2:+2896394 | MS.gene27359:CDS |
| CTGAATCAATACAGAAAAGA+TGG | 0.467593 | 1.2:+2897489 | MS.gene27359:CDS |
| GTCAGAGGCTTCACTTAAGA+AGG | 0.470559 | 1.2:+2896736 | MS.gene27359:CDS |
| GGTTTGCTATGTAGCATTCT+GGG | 0.477968 | 1.2:+2896842 | MS.gene27359:intron |
| AAACTACGACGGCACATTGT+GGG | 0.478159 | 1.2:+2896588 | MS.gene27359:CDS |
| ATTAGTGGGTCGCAGAGTTA+GGG | 0.480416 | 1.2:+2896890 | MS.gene27359:CDS |
| ATGAGGCTAAGGCCGTTGTC+AGG | 0.480704 | 1.2:+2897430 | MS.gene27359:CDS |
| GTCCCTCCTAAATTGGGACT+TGG | 0.482377 | 1.2:-2897322 | None:intergenic |
| CACATCAATAGATTAGTTAG+TGG | 0.489792 | 1.2:-2897862 | None:intergenic |
| CCAGCAACAACATGAGTAGT+AGG | 0.491549 | 1.2:-2894961 | None:intergenic |
| ATAATGGATTTGTTGGAAAG+TGG | 0.496822 | 1.2:+2896913 | MS.gene27359:CDS |
| GGTGGTTCGCTTCACGTCTA+GGG | 0.510231 | 1.2:+2897900 | MS.gene27359:CDS |
| GTGAAGCCTCTGTTATCGTC+AGG | 0.511246 | 1.2:+2897830 | MS.gene27359:CDS |
| TAGTTCATCGGTTTCGTCGT+CGG | 0.511725 | 1.2:-2894683 | None:intergenic |
| TAACTAAATCAGCTTTGCAA+TGG | 0.522702 | 1.2:-2898042 | None:intergenic |
| ATATACAAGACTTTACCAAT+AGG | 0.522988 | 1.2:-2896290 | None:intergenic |
| TAAACTAGATTCTTCTTCCA+CGG | 0.523311 | 1.2:-2896267 | None:intergenic |
| GATGATCTCTATCAACCGAT+TGG | 0.532985 | 1.2:+2896710 | MS.gene27359:CDS |
| GTATCTACTTGTGCATTTGG+TGG | 0.539522 | 1.2:+2896683 | MS.gene27359:CDS |
| AGATCCTTGCGAGTGCAGAC+AGG | 0.541955 | 1.2:-2897985 | None:intergenic |
| TGTCGTTGTTGAAGCAATGT+TGG | 0.543414 | 1.2:-2894872 | None:intergenic |
| AAACTAGATTCTTCTTCCAC+GGG | 0.546495 | 1.2:-2896266 | None:intergenic |
| GACGACGAAACCGATGAACT+AGG | 0.549148 | 1.2:+2894685 | MS.gene27359:CDS |
| CAAGGATCTGGTCAATAGCA+TGG | 0.556262 | 1.2:+2897999 | MS.gene27359:CDS |
| GAGGGACCCACTAGGTGTGT+TGG | 0.558276 | 1.2:+2897338 | MS.gene27359:CDS |
| TCTACTTGTGCATTTGGTGG+CGG | 0.565708 | 1.2:+2896686 | MS.gene27359:CDS |
| GTACAGAACTTGTGCGCCAA+AGG | 0.567215 | 1.2:-2897368 | None:intergenic |
| TAGTGTCTATGATGAGGCTA+AGG | 0.569258 | 1.2:+2897419 | MS.gene27359:CDS |
| GTTCCCTGTCTGCACTCGCA+AGG | 0.571226 | 1.2:+2897981 | MS.gene27359:CDS |
| GAAGATAAAAGTTTCATGCA+AGG | 0.574340 | 1.2:+2896647 | MS.gene27359:CDS |
| ACTGATGCGTCTTTAATAGG+AGG | 0.575647 | 1.2:+2896320 | MS.gene27359:CDS |
| TTGCTTGAGGGAAAAGGCGA+TGG | 0.577341 | 1.2:-2897278 | None:intergenic |
| GAAGCCTCTGACATTCCAAT+CGG | 0.578839 | 1.2:-2896725 | None:intergenic |
| GTGCGTCTGGTTTAATGAGG+TGG | 0.582996 | 1.2:+2897882 | MS.gene27359:CDS |
| TCAACCGCCACAGAACATAT+GGG | 0.583405 | 1.2:-2897936 | None:intergenic |
| TGAAATCACACTAAAAGCGC+AGG | 0.586944 | 1.2:+2896866 | MS.gene27359:CDS |
| ACTCCAAGTCCCAATTTAGG+AGG | 0.588616 | 1.2:+2897319 | MS.gene27359:CDS |
| CGCCGTAAACGAAAGAAACT+CGG | 0.589754 | 1.2:+2894727 | MS.gene27359:CDS |
| AAGGATCTGGTCAATAGCAT+GGG | 0.590506 | 1.2:+2898000 | MS.gene27359:CDS |
| ATTGTCTCAATTGCGTGCAG+AGG | 0.592890 | 1.2:+2896352 | MS.gene27359:CDS |
| GGTTCTACAGTGCGAATGGT+GGG | 0.594182 | 1.2:+2896609 | MS.gene27359:CDS |
| TCGTCGTCGGAGATTGAGAT+CGG | 0.596070 | 1.2:-2894670 | None:intergenic |
| ACACGAATTGGTTTAAGACC+AGG | 0.598308 | 1.2:+2894838 | MS.gene27359:CDS |
| GCGCATTCGACCTAGTTCAT+CGG | 0.599118 | 1.2:-2894695 | None:intergenic |
| GATCCTTGCGAGTGCAGACA+GGG | 0.600367 | 1.2:-2897984 | None:intergenic |
| GAAACTACGACGGCACATTG+TGG | 0.606798 | 1.2:+2896587 | MS.gene27359:CDS |
| CAATTTAGGAGGGACCCACT+AGG | 0.609024 | 1.2:+2897330 | MS.gene27359:CDS |
| CTCCAAGTCCCAATTTAGGA+GGG | 0.612198 | 1.2:+2897320 | MS.gene27359:CDS |
| GGGTTCTACAGTGCGAATGG+TGG | 0.617468 | 1.2:+2896608 | MS.gene27359:CDS |
| AGCGCTTCCAACACACCTAG+TGG | 0.619009 | 1.2:-2897345 | None:intergenic |
| GTTGAATGGTAAAATTCCCA+AGG | 0.623439 | 1.2:+2896977 | MS.gene27359:CDS |
| CTAAAAGCGCAGGAATTAGT+GGG | 0.625147 | 1.2:+2896876 | MS.gene27359:CDS |
| TCGTAGTAGTGTCTATGATG+AGG | 0.628284 | 1.2:+2897413 | MS.gene27359:CDS |
| GATGTGCGTCTGGTTTAATG+AGG | 0.632480 | 1.2:+2897879 | MS.gene27359:CDS |
| CTGATGCGTCTTTAATAGGA+GGG | 0.632733 | 1.2:+2896321 | MS.gene27359:CDS |
| TCAGCTTCCCATATGTTCTG+TGG | 0.637981 | 1.2:+2897929 | MS.gene27359:CDS |
| TGTGGGTTCTACAGTGCGAA+TGG | 0.652523 | 1.2:+2896605 | MS.gene27359:CDS |
| GCGCTTCCAACACACCTAGT+GGG | 0.655267 | 1.2:-2897344 | None:intergenic |
| GCTTCCCATATGTTCTGTGG+CGG | 0.655449 | 1.2:+2897932 | MS.gene27359:CDS |
| GTACTTGCCATATCAGAACA+TGG | 0.661039 | 1.2:+2897387 | MS.gene27359:CDS |
| TTTCATGCAAGGTTGCAAAG+TGG | 0.666633 | 1.2:+2896658 | MS.gene27359:CDS |
| TCAACCGATTGGAATGTCAG+AGG | 0.688554 | 1.2:+2896721 | MS.gene27359:CDS |
| AGATCGGTAGAGTGTTGCTG+TGG | 0.705202 | 1.2:-2894654 | None:intergenic |
| TGAGCAACTAGAGATTCCCG+TGG | 0.719886 | 1.2:+2896250 | MS.gene27359:CDS |
| ATGTTGGAAGAAGAACTACC+TGG | 0.722649 | 1.2:-2894856 | None:intergenic |
| ATGCTTCCTGACGATAACAG+AGG | 0.723941 | 1.2:-2897836 | None:intergenic |
| ATAGGTGAAAGAAACTACGA+CGG | 0.775814 | 1.2:+2896577 | MS.gene27359:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATAAGTAATATAGTT+TGG | + | chr1.2:2896538-2896557 | MS.gene27359:intron | 10.0% |
| !!! | TTTTATTTTGATAAAACTTA+AGG | + | chr1.2:2896157-2896176 | MS.gene27359:intron | 10.0% |
| !! | AATGTGAATTAAAATTAATC+TGG | - | chr1.2:2896469-2896488 | None:intergenic | 15.0% |
| !! | ATGTGAATTAAAATTAATCT+GGG | - | chr1.2:2896468-2896487 | None:intergenic | 15.0% |
| !! | GATTCAACATTATAAAATAT+TGG | - | chr1.2:2897788-2897807 | None:intergenic | 15.0% |
| !!! | ACAAGTTTTAATTTATTTAC+TGG | + | chr1.2:2896377-2896396 | MS.gene27359:CDS | 15.0% |
| !! | AAAACTATTATGAAAACTCT+AGG | + | chr1.2:2895970-2895989 | MS.gene27359:intron | 20.0% |
| !! | AAACTATTATGAAAACTCTA+GGG | + | chr1.2:2895971-2895990 | MS.gene27359:intron | 20.0% |
| !! | ATCATAAAGTGAATTCAAAT+AGG | + | chr1.2:2896073-2896092 | MS.gene27359:intron | 20.0% |
| !! | ATTTATTAGAACTTGAAGTT+AGG | + | chr1.2:2895241-2895260 | MS.gene27359:intron | 20.0% |
| !! | TTTCAATTGATATTGTTGAT+AGG | + | chr1.2:2897657-2897676 | MS.gene27359:intron | 20.0% |
| !!! | AAAATAAAGAAAAAGGGTTT+TGG | - | chr1.2:2895012-2895031 | None:intergenic | 20.0% |
| !!! | AATCAATTGTGTTTTTAGAA+AGG | + | chr1.2:2895806-2895825 | MS.gene27359:intron | 20.0% |
| !!! | ATTCAAGTTAGTTTTAACAA+TGG | - | chr1.2:2894932-2894951 | None:intergenic | 20.0% |
| !!! | TATTTTGATAAAACTTAAGG+AGG | + | chr1.2:2896160-2896179 | MS.gene27359:intron | 20.0% |
| ! | AAAATATGACAGCAAAATCT+TGG | - | chr1.2:2897640-2897659 | None:intergenic | 25.0% |
| ! | AACAAAAAAAGCTTTCTAAG+AGG | - | chr1.2:2897205-2897224 | None:intergenic | 25.0% |
| ! | AAGAGATTTAATGGAAAGAA+AGG | + | chr1.2:2897525-2897544 | MS.gene27359:CDS | 25.0% |
| ! | ATATACAAGACTTTACCAAT+AGG | - | chr1.2:2896293-2896312 | None:intergenic | 25.0% |
| ! | ATGATTCAAATATCAGCAAA+TGG | - | chr1.2:2897138-2897157 | None:intergenic | 25.0% |
| ! | TATATGTTTGATTGCACTAT+TGG | - | chr1.2:2895202-2895221 | None:intergenic | 25.0% |
| ! | TATTTGCCAAATCTATTTAG+TGG | + | chr1.2:2896813-2896832 | MS.gene27359:intron | 25.0% |
| ! | TCAAGCAAAATACTCTATTT+GGG | + | chr1.2:2897293-2897312 | MS.gene27359:CDS | 25.0% |
| ! | TGTAAGTAAAAATAAACGTC+CGG | + | chr1.2:2895698-2895717 | MS.gene27359:intron | 25.0% |
| ! | TTCTAATTCAAGCTGAAAAT+TGG | - | chr1.2:2895735-2895754 | None:intergenic | 25.0% |
| ! | TTGATAAAAAGTTGAATCAG+TGG | - | chr1.2:2897752-2897771 | None:intergenic | 25.0% |
| !! | GTTTGTAGAAATACTTTTGT+TGG | + | chr1.2:2896047-2896066 | MS.gene27359:intron | 25.0% |
| !!! | AAATAGAGTATTTTGCTTGA+GGG | - | chr1.2:2897293-2897312 | None:intergenic | 25.0% |
| !!! | GTTTTCCATTTAGTTTTTGT+AGG | - | chr1.2:2895955-2895974 | None:intergenic | 25.0% |
| AAATCTATTTAGTGGTATGC+AGG | + | chr1.2:2896821-2896840 | MS.gene27359:intron | 30.0% | |
| AAGCAAATTAACCAAGTGTA+TGG | - | chr1.2:2895634-2895653 | None:intergenic | 30.0% | |
| ACATGTGAGTTAATTCTATC+AGG | + | chr1.2:2896197-2896216 | MS.gene27359:intron | 30.0% | |
| AGAAGCTTCTTGTTAAATAC+TGG | + | chr1.2:2894767-2894786 | MS.gene27359:CDS | 30.0% | |
| AGCAAATTAACCAAGTGTAT+GGG | - | chr1.2:2895633-2895652 | None:intergenic | 30.0% | |
| AGTTCTTTCATTTCACTTCT+AGG | + | chr1.2:2896116-2896135 | MS.gene27359:intron | 30.0% | |
| ATGAAGTATAGAAAGAGAAG+CGG | - | chr1.2:2897020-2897039 | None:intergenic | 30.0% | |
| CATCAAAGATGTAATACCTT+GGG | - | chr1.2:2896996-2897015 | None:intergenic | 30.0% | |
| CTCAAGCAAAATACTCTATT+TGG | + | chr1.2:2897292-2897311 | MS.gene27359:CDS | 30.0% | |
| CTGAATCAATACAGAAAAGA+TGG | + | chr1.2:2897489-2897508 | MS.gene27359:CDS | 30.0% | |
| CTTAGAAATCAGTCAAATCA+CGG | + | chr1.2:2895519-2895538 | MS.gene27359:intron | 30.0% | |
| GAAGATAAAAGTTTCATGCA+AGG | + | chr1.2:2896647-2896666 | MS.gene27359:CDS | 30.0% | |
| GAAGTCCTACAAAAACTAAA+TGG | + | chr1.2:2895947-2895966 | MS.gene27359:intron | 30.0% | |
| GAAGTGAAATGAAAGAACTA+AGG | - | chr1.2:2896115-2896134 | None:intergenic | 30.0% | |
| GGTTTCTTTCTTCATTGTAT+AGG | + | chr1.2:2896559-2896578 | MS.gene27359:intron | 30.0% | |
| TAAACTAGATTCTTCTTCCA+CGG | - | chr1.2:2896270-2896289 | None:intergenic | 30.0% | |
| TATCTCTTTCCTCAAATGTT+TGG | - | chr1.2:2896406-2896425 | None:intergenic | 30.0% | |
| TCTACAAACAACAACAATCA+AGG | - | chr1.2:2896036-2896055 | None:intergenic | 30.0% | |
| TGCATACCACTAAATAGATT+TGG | - | chr1.2:2896822-2896841 | None:intergenic | 30.0% | |
| TTCAACCTTTGATCAGAAAA+AGG | - | chr1.2:2896963-2896982 | None:intergenic | 30.0% | |
| TTTGATAAAACTTAAGGAGG+CGG | + | chr1.2:2896163-2896182 | MS.gene27359:intron | 30.0% | |
| ! | AAGCTCAAAATAGTGGTTTT+AGG | - | chr1.2:2895499-2895518 | None:intergenic | 30.0% |
| ! | ACTAGAATTGATTCTTGACA+CGG | - | chr1.2:2895170-2895189 | None:intergenic | 30.0% |
| ! | AGAATCTTGTGAGAACATTT+TGG | - | chr1.2:2897107-2897126 | None:intergenic | 30.0% |
| ! | ATCTTCCTTTTTCTGATCAA+AGG | + | chr1.2:2896955-2896974 | MS.gene27359:CDS | 30.0% |
| ! | CACATCAATAGATTAGTTAG+TGG | - | chr1.2:2897865-2897884 | None:intergenic | 30.0% |
| ! | GAAGAATCTAGTTTACCTAT+TGG | + | chr1.2:2896275-2896294 | MS.gene27359:CDS | 30.0% |
| ! | GACATGTAGATTTTGTAGTA+AGG | + | chr1.2:2895881-2895900 | MS.gene27359:intron | 30.0% |
| ! | TTCTAAGAAGCTCAAAATAG+TGG | - | chr1.2:2895506-2895525 | None:intergenic | 30.0% |
| ! | TTTTACGAGATTACACGAAT+TGG | + | chr1.2:2894826-2894845 | MS.gene27359:CDS | 30.0% |
| ! | TTTTCTGATCAAAGGTTGAA+TGG | + | chr1.2:2896963-2896982 | MS.gene27359:CDS | 30.0% |
| !! | AAAGTTAGTTGATTTGCTTG+CGG | + | chr1.2:2895069-2895088 | MS.gene27359:intron | 30.0% |
| !! | ATAATGGATTTGTTGGAAAG+TGG | + | chr1.2:2896913-2896932 | MS.gene27359:CDS | 30.0% |
| !! | CAAATAGAGTATTTTGCTTG+AGG | - | chr1.2:2897294-2897313 | None:intergenic | 30.0% |
| !! | GTTTTTAGAAAGGCTTTTGT+CGG | + | chr1.2:2895816-2895835 | MS.gene27359:intron | 30.0% |
| !!! | AAAGAAAAAGGGTTTTGGAT+TGG | - | chr1.2:2895007-2895026 | None:intergenic | 30.0% |
| !!! | AAGAAAAAGGGTTTTGGATT+GGG | - | chr1.2:2895006-2895025 | None:intergenic | 30.0% |
| AAACTAGATTCTTCTTCCAC+GGG | - | chr1.2:2896269-2896288 | None:intergenic | 35.0% | |
| AAATCACGGTAATTGAGCAT+TGG | + | chr1.2:2895533-2895552 | MS.gene27359:intron | 35.0% | |
| AACAGACTAGATGAGAAGAT+TGG | - | chr1.2:2897714-2897733 | None:intergenic | 35.0% | |
| AATCACGGTAATTGAGCATT+GGG | + | chr1.2:2895534-2895553 | MS.gene27359:intron | 35.0% | |
| AGTAAGGAGAGTAAATCAGA+TGG | + | chr1.2:2895897-2895916 | MS.gene27359:intron | 35.0% | |
| ATAGGTGAAAGAAACTACGA+CGG | + | chr1.2:2896577-2896596 | MS.gene27359:intron | 35.0% | |
| ATGCATTGAGAAGTGACAAT+GGG | - | chr1.2:2895372-2895391 | None:intergenic | 35.0% | |
| CCATTAAATCTCTTGTCTAC+AGG | - | chr1.2:2897519-2897538 | None:intergenic | 35.0% | |
| CCTGTAGACAAGAGATTTAA+TGG | + | chr1.2:2897516-2897535 | MS.gene27359:CDS | 35.0% | |
| GCATCAAAGATGTAATACCT+TGG | - | chr1.2:2896997-2897016 | None:intergenic | 35.0% | |
| GTTGAATGGTAAAATTCCCA+AGG | + | chr1.2:2896977-2896996 | MS.gene27359:CDS | 35.0% | |
| GTTGTATCTACTTGTGCATT+TGG | + | chr1.2:2896680-2896699 | MS.gene27359:CDS | 35.0% | |
| TAAAAGAGTAAAAACGCAGC+TGG | - | chr1.2:2894811-2894830 | None:intergenic | 35.0% | |
| TACCGAGTTTCTTTCGTTTA+CGG | - | chr1.2:2894732-2894751 | None:intergenic | 35.0% | |
| TACTGGAAACCAAACATTTG+AGG | + | chr1.2:2896394-2896413 | MS.gene27359:CDS | 35.0% | |
| TCATTGTTAACCCATACACT+TGG | + | chr1.2:2895620-2895639 | MS.gene27359:intron | 35.0% | |
| TGAAGTATAGAAAGAGAAGC+GGG | - | chr1.2:2897019-2897038 | None:intergenic | 35.0% | |
| ! | ACTCTAGGGATTAATGAGTT+TGG | + | chr1.2:2895985-2896004 | MS.gene27359:intron | 35.0% |
| ! | AGTATTTTGCTTGAGGGAAA+AGG | - | chr1.2:2897287-2897306 | None:intergenic | 35.0% |
| ! | CTCCATAAAAGTGAGTTGAA+AGG | - | chr1.2:2895318-2895337 | None:intergenic | 35.0% |
| ! | GGAAAGAGATAGAAGTTTTG+AGG | + | chr1.2:2896415-2896434 | MS.gene27359:CDS | 35.0% |
| ! | TCTAGTTGCTCAAGTTTTTC+AGG | - | chr1.2:2896242-2896261 | None:intergenic | 35.0% |
| !! | AAAATTGGAGCTTTAGACTC+CGG | - | chr1.2:2895720-2895739 | None:intergenic | 35.0% |
| !! | ACAAACAGAGCATTGAATCA+CGG | - | chr1.2:2895442-2895461 | None:intergenic | 35.0% |
| !! | ACACTTGGTTAATTTGCTTG+CGG | + | chr1.2:2895635-2895654 | MS.gene27359:intron | 35.0% |
| !! | CTTGTGAGAACATTTTGGTA+GGG | - | chr1.2:2897102-2897121 | None:intergenic | 35.0% |
| !! | GTTAGGGATAATGGATTTGT+TGG | + | chr1.2:2896906-2896925 | MS.gene27359:CDS | 35.0% |
| !! | TCTTGTGAGAACATTTTGGT+AGG | - | chr1.2:2897103-2897122 | None:intergenic | 35.0% |
| !! | TGCCTTTCAACTCACTTTTA+TGG | + | chr1.2:2895313-2895332 | MS.gene27359:intron | 35.0% |
| !! | TTTGCAATGGTTTTGCTTTG+CGG | - | chr1.2:2898032-2898051 | None:intergenic | 35.0% |
| !!! | AGAAAAAGGGTTTTGGATTG+GGG | - | chr1.2:2895005-2895024 | None:intergenic | 35.0% |
| !!! | GATAGAAGTTTTGAGGTGAT+TGG | + | chr1.2:2896422-2896441 | MS.gene27359:intron | 35.0% |
| AAGGAGAGTAAATCAGATGG+AGG | + | chr1.2:2895900-2895919 | MS.gene27359:intron | 40.0% | |
| AAGGATCTGGTCAATAGCAT+GGG | + | chr1.2:2898000-2898019 | MS.gene27359:CDS | 40.0% | |
| ACTGATGCGTCTTTAATAGG+AGG | + | chr1.2:2896320-2896339 | MS.gene27359:CDS | 40.0% | |
| AGATGCGTGTATGTTTGGAT+TGG | + | chr1.2:2895336-2895355 | MS.gene27359:intron | 40.0% | |
| AGGAGAGTAAATCAGATGGA+GGG | + | chr1.2:2895901-2895920 | MS.gene27359:intron | 40.0% | |
| AGTTAAATCACTAGAGGCAG+AGG | + | chr1.2:2895925-2895944 | MS.gene27359:intron | 40.0% | |
| ATGTTGGAAGAAGAACTACC+TGG | - | chr1.2:2894859-2894878 | None:intergenic | 40.0% | |
| CATGCATTGAGAAGTGACAA+TGG | - | chr1.2:2895373-2895392 | None:intergenic | 40.0% | |
| CTAATCTATTGATGTGCGTC+TGG | + | chr1.2:2897869-2897888 | MS.gene27359:CDS | 40.0% | |
| CTCCTTACCACAAAACATAC+AGG | - | chr1.2:2895857-2895876 | None:intergenic | 40.0% | |
| CTGATGCGTCTTTAATAGGA+GGG | + | chr1.2:2896321-2896340 | MS.gene27359:CDS | 40.0% | |
| GACATGTTTGAATGCTTTCG+TGG | - | chr1.2:2895784-2895803 | None:intergenic | 40.0% | |
| GAGGGTAGTTAAATCACTAG+AGG | + | chr1.2:2895919-2895938 | MS.gene27359:intron | 40.0% | |
| GATGATCTCTATCAACCGAT+TGG | + | chr1.2:2896710-2896729 | MS.gene27359:CDS | 40.0% | |
| GTACTTGCCATATCAGAACA+TGG | + | chr1.2:2897387-2897406 | MS.gene27359:CDS | 40.0% | |
| GTATCTACTTGTGCATTTGG+TGG | + | chr1.2:2896683-2896702 | MS.gene27359:CDS | 40.0% | |
| GTTGTCTTCATTAACCCCAT+GGG | + | chr1.2:2897171-2897190 | MS.gene27359:intron | 40.0% | |
| TAGACTCCAAGTCCCAATTT+AGG | + | chr1.2:2897316-2897335 | MS.gene27359:CDS | 40.0% | |
| TAGTGTCTATGATGAGGCTA+AGG | + | chr1.2:2897419-2897438 | MS.gene27359:CDS | 40.0% | |
| TATGGAGATGCGTGTATGTT+TGG | + | chr1.2:2895331-2895350 | MS.gene27359:intron | 40.0% | |
| TCGTAGTAGTGTCTATGATG+AGG | + | chr1.2:2897413-2897432 | MS.gene27359:CDS | 40.0% | |
| TGTCGTTGTTGAAGCAATGT+TGG | - | chr1.2:2894875-2894894 | None:intergenic | 40.0% | |
| TGTTGTCTTCATTAACCCCA+TGG | + | chr1.2:2897170-2897189 | MS.gene27359:intron | 40.0% | |
| TTGTCTTCATTAACCCCATG+GGG | + | chr1.2:2897172-2897191 | MS.gene27359:intron | 40.0% | |
| TTTCATGCAAGGTTGCAAAG+TGG | + | chr1.2:2896658-2896677 | MS.gene27359:CDS | 40.0% | |
| ! | ACACGAATTGGTTTAAGACC+AGG | + | chr1.2:2894838-2894857 | MS.gene27359:CDS | 40.0% |
| ! | ACTAAAAGCGCAGGAATTAG+TGG | + | chr1.2:2896875-2896894 | MS.gene27359:CDS | 40.0% |
| ! | CTAAAAGCGCAGGAATTAGT+GGG | + | chr1.2:2896876-2896895 | MS.gene27359:CDS | 40.0% |
| ! | GACCTGTATGTTTTGTGGTA+AGG | + | chr1.2:2895852-2895871 | MS.gene27359:intron | 40.0% |
| ! | GAGAAGACCTGTATGTTTTG+TGG | + | chr1.2:2895847-2895866 | MS.gene27359:intron | 40.0% |
| ! | TGAAATCACACTAAAAGCGC+AGG | + | chr1.2:2896866-2896885 | MS.gene27359:CDS | 40.0% |
| ! | TGTCACTTCTCAATGCATGT+GGG | + | chr1.2:2895374-2895393 | MS.gene27359:intron | 40.0% |
| ! | TTCACTTCTAGGAATGAGTG+AGG | + | chr1.2:2896127-2896146 | MS.gene27359:intron | 40.0% |
| ! | TTGTCACTTCTCAATGCATG+TGG | + | chr1.2:2895373-2895392 | MS.gene27359:intron | 40.0% |
| !! | AGGTTTGCTATGTAGCATTC+TGG | + | chr1.2:2896841-2896860 | MS.gene27359:intron | 40.0% |
| !! | CAATGCTCTGTTTGTTTCTG+CGG | + | chr1.2:2895447-2895466 | MS.gene27359:intron | 40.0% |
| !! | CACTTGGTTAATTTGCTTGC+GGG | + | chr1.2:2895636-2895655 | MS.gene27359:intron | 40.0% |
| !! | GGTTTGCTATGTAGCATTCT+GGG | + | chr1.2:2896842-2896861 | MS.gene27359:intron | 40.0% |
| !!! | AGTTGCTCAAGTTTTTCAGG+TGG | - | chr1.2:2896239-2896258 | None:intergenic | 40.0% |
| !!! | CGCTTTGTTTTTCCTGACAA+CGG | - | chr1.2:2897445-2897464 | None:intergenic | 40.0% |
| !!! | GAAAAAGGGTTTTGGATTGG+GGG | - | chr1.2:2895004-2895023 | None:intergenic | 40.0% |
| !!! | TTCCTTTTTCAACCACGTGT+GGG | + | chr1.2:2897231-2897250 | MS.gene27359:intron | 40.0% |
| !!! | TTTCCTTTTTCAACCACGTG+TGG | + | chr1.2:2897230-2897249 | MS.gene27359:intron | 40.0% |
| AAACTACGACGGCACATTGT+GGG | + | chr1.2:2896588-2896607 | MS.gene27359:CDS | 45.0% | |
| AAGTGACAATGGGTGATCCA+TGG | - | chr1.2:2895362-2895381 | None:intergenic | 45.0% | |
| ACAACCAAGCGTATCCAGTA+GGG | - | chr1.2:2896509-2896528 | None:intergenic | 45.0% | |
| ACCAAACCAAACAGCCACTT+CGG | + | chr1.2:2895579-2895598 | MS.gene27359:intron | 45.0% | |
| ACGAGCTCCATGTTCTGATA+TGG | - | chr1.2:2897397-2897416 | None:intergenic | 45.0% | |
| ACTCCAAGTCCCAATTTAGG+AGG | + | chr1.2:2897319-2897338 | MS.gene27359:CDS | 45.0% | |
| AGTTGCACTTCAACTTCCTC+TGG | - | chr1.2:2897471-2897490 | None:intergenic | 45.0% | |
| ATGCTTCCTGACGATAACAG+AGG | - | chr1.2:2897839-2897858 | None:intergenic | 45.0% | |
| ATTGTCTCAATTGCGTGCAG+AGG | + | chr1.2:2896352-2896371 | MS.gene27359:CDS | 45.0% | |
| CAAGGATCTGGTCAATAGCA+TGG | + | chr1.2:2897999-2898018 | MS.gene27359:CDS | 45.0% | |
| CCAGCAACAACATGAGTAGT+AGG | - | chr1.2:2894964-2894983 | None:intergenic | 45.0% | |
| CCTACTACTCATGTTGTTGC+TGG | + | chr1.2:2894961-2894980 | MS.gene27359:CDS | 45.0% | |
| CGCCGTAAACGAAAGAAACT+CGG | + | chr1.2:2894727-2894746 | MS.gene27359:CDS | 45.0% | |
| CTCCAAGTCCCAATTTAGGA+GGG | + | chr1.2:2897320-2897339 | MS.gene27359:CDS | 45.0% | |
| GAAAAACAAAGCGAAGCCAG+AGG | + | chr1.2:2897452-2897471 | MS.gene27359:CDS | 45.0% | |
| GAAGCCTCTGACATTCCAAT+CGG | - | chr1.2:2896728-2896747 | None:intergenic | 45.0% | |
| GCGACTGATGCGTCTTTAAT+AGG | + | chr1.2:2896317-2896336 | MS.gene27359:CDS | 45.0% | |
| GTCAGAGGCTTCACTTAAGA+AGG | + | chr1.2:2896736-2896755 | MS.gene27359:CDS | 45.0% | |
| TACAACCAAGCGTATCCAGT+AGG | - | chr1.2:2896510-2896529 | None:intergenic | 45.0% | |
| TCAACCGATTGGAATGTCAG+AGG | + | chr1.2:2896721-2896740 | MS.gene27359:CDS | 45.0% | |
| TCAACCGCCACAGAACATAT+GGG | - | chr1.2:2897939-2897958 | None:intergenic | 45.0% | |
| TCAGCTTCCCATATGTTCTG+TGG | + | chr1.2:2897929-2897948 | MS.gene27359:CDS | 45.0% | |
| TGTCTTCATTAACCCCATGG+GGG | + | chr1.2:2897173-2897192 | MS.gene27359:intron | 45.0% | |
| TGTGTGTGTGTGTGTGTGTT+TGG | + | chr1.2:2895139-2895158 | MS.gene27359:intron | 45.0% | |
| TTCAACCGCCACAGAACATA+TGG | - | chr1.2:2897940-2897959 | None:intergenic | 45.0% | |
| ! | AATTAGTGGGTCGCAGAGTT+AGG | + | chr1.2:2896889-2896908 | MS.gene27359:CDS | 45.0% |
| ! | ATTAGTGGGTCGCAGAGTTA+GGG | + | chr1.2:2896890-2896909 | MS.gene27359:CDS | 45.0% |
| ! | GATGTGCGTCTGGTTTAATG+AGG | + | chr1.2:2897879-2897898 | MS.gene27359:CDS | 45.0% |
| ! | TAGTGGGTCCCTCCTAAATT+GGG | - | chr1.2:2897331-2897350 | None:intergenic | 45.0% |
| ! | TCTACTTGTGCATTTGGTGG+CGG | + | chr1.2:2896686-2896705 | MS.gene27359:CDS | 45.0% |
| !! | GTGTATGTTTGGATTGGCCA+TGG | + | chr1.2:2895342-2895361 | MS.gene27359:intron | 45.0% |
| !! | TAAGAGGAAAGTACCCCCAT+GGG | - | chr1.2:2897189-2897208 | None:intergenic | 45.0% |
| !! | TAGTTCATCGGTTTCGTCGT+CGG | - | chr1.2:2894686-2894705 | None:intergenic | 45.0% |
| !!! | TGCTACTTGTTTTGCCCTAC+TGG | + | chr1.2:2896492-2896511 | MS.gene27359:intron | 45.0% |
| !! | AAATAAAAAAATAAAGAAAA+AGG | - | chr1.2:2895019-2895038 | None:intergenic | 5.0% |
| !! | AATAAAAAAATAAAGAAAAA+GGG | - | chr1.2:2895018-2895037 | None:intergenic | 5.0% |
| AAGATATCCAAGCCCACACG+TGG | - | chr1.2:2897246-2897265 | None:intergenic | 50.0% | |
| AGCCCACACGTGGTTGAAAA+AGG | - | chr1.2:2897236-2897255 | None:intergenic | 50.0% | |
| CAATTTAGGAGGGACCCACT+AGG | + | chr1.2:2897330-2897349 | MS.gene27359:CDS | 50.0% | |
| CCAAACCAAACAGCCACTTC+GGG | + | chr1.2:2895580-2895599 | MS.gene27359:intron | 50.0% | |
| GAAACTACGACGGCACATTG+TGG | + | chr1.2:2896587-2896606 | MS.gene27359:CDS | 50.0% | |
| GACAGAATTGCATCCCGAAG+TGG | - | chr1.2:2895596-2895615 | None:intergenic | 50.0% | |
| GACGACGAAACCGATGAACT+AGG | + | chr1.2:2894685-2894704 | MS.gene27359:CDS | 50.0% | |
| GCGCATTCGACCTAGTTCAT+CGG | - | chr1.2:2894698-2894717 | None:intergenic | 50.0% | |
| GCTTCCCATATGTTCTGTGG+CGG | + | chr1.2:2897932-2897951 | MS.gene27359:CDS | 50.0% | |
| GGTCGCAGAGTTAGGGATAA+TGG | + | chr1.2:2896897-2896916 | MS.gene27359:CDS | 50.0% | |
| GGTTCTACAGTGCGAATGGT+GGG | + | chr1.2:2896609-2896628 | MS.gene27359:CDS | 50.0% | |
| GTACAGAACTTGTGCGCCAA+AGG | - | chr1.2:2897371-2897390 | None:intergenic | 50.0% | |
| GTCCCTCCTAAATTGGGACT+TGG | - | chr1.2:2897325-2897344 | None:intergenic | 50.0% | |
| GTGAAGCCTCTGTTATCGTC+AGG | + | chr1.2:2897830-2897849 | MS.gene27359:CDS | 50.0% | |
| TCGTCGTCGGAGATTGAGAT+CGG | - | chr1.2:2894673-2894692 | None:intergenic | 50.0% | |
| TGAGCAACTAGAGATTCCCG+TGG | + | chr1.2:2896250-2896269 | MS.gene27359:CDS | 50.0% | |
| TGTGGGTTCTACAGTGCGAA+TGG | + | chr1.2:2896605-2896624 | MS.gene27359:CDS | 50.0% | |
| TTGCTTGAGGGAAAAGGCGA+TGG | - | chr1.2:2897281-2897300 | None:intergenic | 50.0% | |
| TTTGCCCTACTGGATACGCT+TGG | + | chr1.2:2896502-2896521 | MS.gene27359:intron | 50.0% | |
| ! | CTAGTGGGTCCCTCCTAAAT+TGG | - | chr1.2:2897332-2897351 | None:intergenic | 50.0% |
| ! | GTGCGTCTGGTTTAATGAGG+TGG | + | chr1.2:2897882-2897901 | MS.gene27359:CDS | 50.0% |
| ! | GTGGCGTGTTATTGTCGTTC+AGG | + | chr1.2:2896932-2896951 | MS.gene27359:CDS | 50.0% |
| ! | TTTTCAACCACGTGTGGGCT+TGG | + | chr1.2:2897236-2897255 | MS.gene27359:intron | 50.0% |
| !! | AAGAGGAAAGTACCCCCATG+GGG | - | chr1.2:2897188-2897207 | None:intergenic | 50.0% |
| !! | ACAGTGCGAATGGTGGGTTT+AGG | + | chr1.2:2896615-2896634 | MS.gene27359:CDS | 50.0% |
| !! | AGATCGGTAGAGTGTTGCTG+TGG | - | chr1.2:2894657-2894676 | None:intergenic | 50.0% |
| !! | CTAAGAGGAAAGTACCCCCA+TGG | - | chr1.2:2897190-2897209 | None:intergenic | 50.0% |
| !! | GAAGTGGCTGTTTGGTTTGG+TGG | - | chr1.2:2895580-2895599 | None:intergenic | 50.0% |
| !! | TGGCTGTTTGGTTTGGTGGT+GGG | - | chr1.2:2895576-2895595 | None:intergenic | 50.0% |
| AGATCCTTGCGAGTGCAGAC+AGG | - | chr1.2:2897988-2898007 | None:intergenic | 55.0% | |
| AGCGCTTCCAACACACCTAG+TGG | - | chr1.2:2897348-2897367 | None:intergenic | 55.0% | |
| AGGTGGTTCGCTTCACGTCT+AGG | + | chr1.2:2897899-2897918 | MS.gene27359:CDS | 55.0% | |
| ATGAGGCTAAGGCCGTTGTC+AGG | + | chr1.2:2897430-2897449 | MS.gene27359:CDS | 55.0% | |
| CCCGAAGTGGCTGTTTGGTT+TGG | - | chr1.2:2895583-2895602 | None:intergenic | 55.0% | |
| GATCCTTGCGAGTGCAGACA+GGG | - | chr1.2:2897987-2898006 | None:intergenic | 55.0% | |
| GCAGAATGTGCGTCTGTGCT+TGG | - | chr1.2:2895477-2895496 | None:intergenic | 55.0% | |
| GCGCTTCCAACACACCTAGT+GGG | - | chr1.2:2897347-2897366 | None:intergenic | 55.0% | |
| GGGTTCTACAGTGCGAATGG+TGG | + | chr1.2:2896608-2896627 | MS.gene27359:CDS | 55.0% | |
| GGTGGTTCGCTTCACGTCTA+GGG | + | chr1.2:2897900-2897919 | MS.gene27359:CDS | 55.0% | |
| TGCATCCCGAAGTGGCTGTT+TGG | - | chr1.2:2895588-2895607 | None:intergenic | 55.0% | |
| TGTCTGCACTCGCAAGGATC+TGG | + | chr1.2:2897987-2898006 | MS.gene27359:CDS | 55.0% | |
| !! | GTGGCTGTTTGGTTTGGTGG+TGG | - | chr1.2:2895577-2895596 | None:intergenic | 55.0% |
| !! | GTGTGTTGGAAGCGCTCCTT+TGG | + | chr1.2:2897352-2897371 | MS.gene27359:CDS | 55.0% |
| GAGGGACCCACTAGGTGTGT+TGG | + | chr1.2:2897338-2897357 | MS.gene27359:CDS | 60.0% | |
| GTTCCCTGTCTGCACTCGCA+AGG | + | chr1.2:2897981-2898000 | MS.gene27359:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 2894649 | 2898056 | 2894649 | ID=MS.gene27359 |
| chr1.2 | mRNA | 2894649 | 2898056 | 2894649 | ID=MS.gene27359.t1;Parent=MS.gene27359 |
| chr1.2 | exon | 2894649 | 2894994 | 2894649 | ID=MS.gene27359.t1.exon1;Parent=MS.gene27359.t1 |
| chr1.2 | CDS | 2894649 | 2894994 | 2894649 | ID=cds.MS.gene27359.t1;Parent=MS.gene27359.t1 |
| chr1.2 | exon | 2896219 | 2896436 | 2896219 | ID=MS.gene27359.t1.exon2;Parent=MS.gene27359.t1 |
| chr1.2 | CDS | 2896219 | 2896436 | 2896219 | ID=cds.MS.gene27359.t1;Parent=MS.gene27359.t1 |
| chr1.2 | exon | 2896581 | 2896757 | 2896581 | ID=MS.gene27359.t1.exon3;Parent=MS.gene27359.t1 |
| chr1.2 | CDS | 2896581 | 2896757 | 2896581 | ID=cds.MS.gene27359.t1;Parent=MS.gene27359.t1 |
| chr1.2 | exon | 2896843 | 2896998 | 2896843 | ID=MS.gene27359.t1.exon4;Parent=MS.gene27359.t1 |
| chr1.2 | CDS | 2896843 | 2896998 | 2896843 | ID=cds.MS.gene27359.t1;Parent=MS.gene27359.t1 |
| chr1.2 | exon | 2897270 | 2897546 | 2897270 | ID=MS.gene27359.t1.exon5;Parent=MS.gene27359.t1 |
| chr1.2 | CDS | 2897270 | 2897546 | 2897270 | ID=cds.MS.gene27359.t1;Parent=MS.gene27359.t1 |
| chr1.2 | exon | 2897824 | 2898056 | 2897824 | ID=MS.gene27359.t1.exon6;Parent=MS.gene27359.t1 |
| chr1.2 | CDS | 2897824 | 2898056 | 2897824 | ID=cds.MS.gene27359.t1;Parent=MS.gene27359.t1 |
| Gene Sequence |
| Protein sequence |
