Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28350.t1 | RHN61142.1 | 90.8 | 381 | 31 | 1 | 1 | 377 | 27 | 407 | 2.70E-172 | 614.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28350.t1 | Q9SIC4 | 66.2 | 296 | 92 | 2 | 81 | 376 | 91 | 378 | 1.7e-109 | 397.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28350.t1 | A0A072UMM8 | 90.8 | 381 | 31 | 1 | 1 | 377 | 1 | 381 | 2.0e-172 | 614.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99026 | MS.gene28350 | PPI |
| MS.gene03207 | MS.gene28350 | PPI |
| MS.gene73789 | MS.gene28350 | PPI |
| MS.gene032779 | MS.gene28350 | PPI |
| MS.gene003895 | MS.gene28350 | PPI |
| MS.gene28350 | MS.gene46509 | PPI |
| MS.gene066288 | MS.gene28350 | PPI |
| MS.gene02580 | MS.gene28350 | PPI |
| MS.gene013797 | MS.gene28350 | PPI |
| MS.gene54568 | MS.gene28350 | PPI |
| MS.gene28350 | MS.gene49595 | PPI |
| MS.gene28350 | MS.gene003895 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28350.t1 | MTR_4g067060 | 93.176 | 381 | 22 | 1 | 1 | 377 | 1 | 381 | 0.0 | 724 |
| MS.gene28350.t1 | MTR_2g098660 | 60.952 | 315 | 91 | 3 | 44 | 358 | 29 | 311 | 7.74e-130 | 375 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28350.t1 | AT2G31450 | 61.329 | 331 | 103 | 4 | 35 | 358 | 48 | 360 | 1.04e-140 | 405 |
| MS.gene28350.t1 | AT2G31450 | 60.909 | 330 | 104 | 4 | 36 | 358 | 51 | 362 | 6.18e-139 | 400 |
| MS.gene28350.t1 | AT1G05900 | 57.273 | 330 | 127 | 5 | 36 | 358 | 47 | 369 | 2.31e-129 | 377 |
| MS.gene28350.t1 | AT1G05900 | 60.268 | 224 | 81 | 2 | 86 | 303 | 93 | 314 | 1.50e-93 | 283 |
Find 96 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCCAGACTTGGTGGATT+TGG | 0.159413 | 4.2:-38780808 | None:intergenic |
| CATACCAATAGAGGATTAAT+TGG | 0.189975 | 4.2:-38780488 | None:intergenic |
| GGAAGCTGAAGCGCCGGATT+TGG | 0.215287 | 4.2:-38776205 | None:intergenic |
| GAAGCTGAAGCGCCGGATTT+GGG | 0.221690 | 4.2:-38776204 | None:intergenic |
| CTTCCAGACTTGGTGGATTT+GGG | 0.227785 | 4.2:-38780807 | None:intergenic |
| GTCGTCTCCTTGGTTTGTTT+TGG | 0.239443 | 4.2:+38776104 | MS.gene28350:CDS |
| TATGCAAAGTCTTCAATTTC+AGG | 0.246614 | 4.2:-38776596 | None:intergenic |
| ATTGAAGACTTTGCATATAA+AGG | 0.268285 | 4.2:+38776602 | MS.gene28350:CDS |
| GACTTGGTGGATTTGGGAAC+TGG | 0.269436 | 4.2:-38780801 | None:intergenic |
| GAATATCAACAGGTTGGATT+TGG | 0.297080 | 4.2:+38780684 | MS.gene28350:intron |
| CTTCTTGTTCCTTCCAGACT+TGG | 0.315451 | 4.2:-38780817 | None:intergenic |
| GATTGATATGATCCTTGGTT+TGG | 0.364085 | 4.2:-38778333 | None:intergenic |
| CATACCAAATGAGCCATCTT+AGG | 0.370853 | 4.2:-38779159 | None:intergenic |
| TCTCCACAGCGAGGTCTTAG+AGG | 0.373498 | 4.2:-38780723 | None:intergenic |
| CTCGGTTGGGTGTCAAGATT+GGG | 0.380820 | 4.2:+38779334 | MS.gene28350:CDS |
| GCTCGGTTGGGTGTCAAGAT+TGG | 0.388498 | 4.2:+38779333 | MS.gene28350:CDS |
| ATTCGCAAAATGAGGTGTTC+TGG | 0.390605 | 4.2:+38777851 | MS.gene28350:CDS |
| AGTGACACTCTTGTCTCTTC+AGG | 0.393822 | 4.2:-38780434 | None:intergenic |
| TCCTTCCCTCGTCGTCTCCT+TGG | 0.394923 | 4.2:+38776094 | MS.gene28350:CDS |
| GTCAAGATTGGGCACGAAAC+AGG | 0.402226 | 4.2:+38779345 | MS.gene28350:CDS |
| GGATCCAATTAATCCTCTAT+TGG | 0.402662 | 4.2:+38780484 | MS.gene28350:CDS |
| CTTGTGTCCATCCGCGTTCA+AGG | 0.402709 | 4.2:+38780761 | MS.gene28350:CDS |
| CTTGTTCCTTCCAGACTTGG+TGG | 0.406554 | 4.2:-38780814 | None:intergenic |
| ACCATGATTGATATGATCCT+TGG | 0.409171 | 4.2:-38778338 | None:intergenic |
| AGGTCCTAAGATGGCTCATT+TGG | 0.410810 | 4.2:+38779155 | MS.gene28350:CDS |
| TCAGCATTGTTAATTGCATC+AGG | 0.415747 | 4.2:-38778784 | None:intergenic |
| CTTCGGACGTAGACATGAAC+TGG | 0.419195 | 4.2:-38776231 | None:intergenic |
| GTTCCCAAATCCACCAAGTC+TGG | 0.420070 | 4.2:+38780804 | MS.gene28350:CDS |
| ACTTTATGAGTCTGTGTTGA+AGG | 0.425998 | 4.2:-38776315 | None:intergenic |
| AGATGCACCAGTGGACACTA+TGG | 0.426856 | 4.2:+38777874 | MS.gene28350:CDS |
| GCATCTGCAATCGGCTCGGT+TGG | 0.427174 | 4.2:+38779320 | MS.gene28350:CDS |
| ACTTGGTGGATTTGGGAACT+GGG | 0.429229 | 4.2:-38780800 | None:intergenic |
| ATATAAAGGATCAAATGAAT+TGG | 0.433517 | 4.2:+38776616 | MS.gene28350:CDS |
| ATTGGATCCCATTCTTCCCT+TGG | 0.438799 | 4.2:-38780470 | None:intergenic |
| GAGCAACTACTACAACTTCC+AGG | 0.441588 | 4.2:+38779129 | MS.gene28350:CDS |
| AATATTTGTCTCATGAAGTA+TGG | 0.442213 | 4.2:+38779084 | MS.gene28350:CDS |
| CACTGCAATTGTGGCTTCCA+AGG | 0.443592 | 4.2:+38780453 | MS.gene28350:CDS |
| TGTGGCTTCCAAGGGAAGAA+TGG | 0.449796 | 4.2:+38780462 | MS.gene28350:CDS |
| GGTAGTGGTGGTGATTCCTT+TGG | 0.463377 | 4.2:-38776265 | None:intergenic |
| TGAGTTTACCATACCAATAG+AGG | 0.473658 | 4.2:-38780497 | None:intergenic |
| TGGTTCTACGCTACCTCCTA+AGG | 0.476967 | 4.2:+38777910 | MS.gene28350:CDS |
| TCCGACTCCGACCCCAAATC+CGG | 0.477207 | 4.2:+38776192 | MS.gene28350:CDS |
| CATCTGCAATCGGCTCGGTT+GGG | 0.481915 | 4.2:+38779321 | MS.gene28350:CDS |
| CGCTGGGAAGAGACGCTTGA+GGG | 0.484720 | 4.2:+38777827 | MS.gene28350:CDS |
| GTGGCTTCCAAGGGAAGAAT+GGG | 0.487229 | 4.2:+38780463 | MS.gene28350:CDS |
| GTCGGAGTCGGAGAGTTTGA+TGG | 0.489580 | 4.2:-38776181 | None:intergenic |
| AGTTAAATCACCTGCACGCT+GGG | 0.490042 | 4.2:+38777811 | MS.gene28350:intron |
| GCGGCTTCCTTGAACGCGGA+TGG | 0.496718 | 4.2:-38780768 | None:intergenic |
| GACGTAGACATGAACTGGTT+GGG | 0.499633 | 4.2:-38776226 | None:intergenic |
| AGCGTCTCTTCCCAGCGTGC+AGG | 0.503259 | 4.2:-38777821 | None:intergenic |
| ACCAAGGATCATATCAATCA+TGG | 0.504759 | 4.2:+38778337 | MS.gene28350:CDS |
| ACCAAGGAGACGACGAGGGA+AGG | 0.507812 | 4.2:-38776095 | None:intergenic |
| GGAAAGAAGATTTGCTGTCC+TGG | 0.508321 | 4.2:+38778291 | MS.gene28350:intron |
| GGACGTAGACATGAACTGGT+TGG | 0.514912 | 4.2:-38776227 | None:intergenic |
| CAAGAGTGTCACTGCAATTG+TGG | 0.515306 | 4.2:+38780444 | MS.gene28350:CDS |
| GCCGGATTTGGGGTCGGAGT+CGG | 0.519560 | 4.2:-38776193 | None:intergenic |
| GAAGCCACTTCACTTTCAGT+TGG | 0.521194 | 4.2:-38776851 | None:intergenic |
| CACCGCATCTGCAATCGGCT+CGG | 0.525408 | 4.2:+38779316 | MS.gene28350:CDS |
| GTCGGAGAGTTTGATGGAAG+CGG | 0.534044 | 4.2:-38776175 | None:intergenic |
| ATGTCCACCGCATCTGCAAT+CGG | 0.535195 | 4.2:+38779311 | MS.gene28350:CDS |
| AACCGAGCCGATTGCAGATG+CGG | 0.540125 | 4.2:-38779318 | None:intergenic |
| TAGTTAAATCACCTGCACGC+TGG | 0.549770 | 4.2:+38777810 | MS.gene28350:intron |
| TCCAGGCATAGGTCCTAAGA+TGG | 0.552749 | 4.2:+38779146 | MS.gene28350:CDS |
| GCCATCTTAGGACCTATGCC+TGG | 0.556487 | 4.2:-38779147 | None:intergenic |
| TCACATCCCATAGTGTCCAC+TGG | 0.558188 | 4.2:-38777881 | None:intergenic |
| AAGCTGAAGCGCCGGATTTG+GGG | 0.575203 | 4.2:-38776203 | None:intergenic |
| TCCGCGTTCAAGGAAGCCGC+AGG | 0.576159 | 4.2:+38780771 | MS.gene28350:CDS |
| AATAGGTTATGAATGTTGCA+TGG | 0.580611 | 4.2:+38779257 | MS.gene28350:intron |
| CCAAATCCACCAAGTCTGGA+AGG | 0.584547 | 4.2:+38780808 | MS.gene28350:CDS |
| TTGAGGGTATTCGCAAAATG+AGG | 0.585116 | 4.2:+38777843 | MS.gene28350:CDS |
| TTGATAAAAGAGAAGATACC+AGG | 0.586566 | 4.2:-38778309 | None:intergenic |
| GGGAACTGGGCTTGTACCTG+CGG | 0.587952 | 4.2:-38780787 | None:intergenic |
| ACTGCAATTGTGGCTTCCAA+GGG | 0.592814 | 4.2:+38780454 | MS.gene28350:CDS |
| GAGTATCTACACATATCCCT+TGG | 0.595774 | 4.2:-38779288 | None:intergenic |
| GTTGCATGGAACAATGTCCA+AGG | 0.599309 | 4.2:+38779271 | MS.gene28350:CDS |
| CTACTACAACTTCCAGGCAT+AGG | 0.599409 | 4.2:+38779135 | MS.gene28350:CDS |
| GTGGCTTCTACCACACATAG+TGG | 0.602671 | 4.2:+38776866 | MS.gene28350:CDS |
| GATTCCAACTGAAAGTGAAG+TGG | 0.605901 | 4.2:+38776847 | MS.gene28350:CDS |
| ATACAGGGTCAAACCTTAGG+AGG | 0.609377 | 4.2:-38777923 | None:intergenic |
| AACAAACCAAGGAGACGACG+AGG | 0.611827 | 4.2:-38776100 | None:intergenic |
| TGGTTGGGAAGCTGAAGCGC+CGG | 0.612062 | 4.2:-38776211 | None:intergenic |
| CGAGCCGATTGCAGATGCGG+TGG | 0.617927 | 4.2:-38779315 | None:intergenic |
| ATTTGTCTCATGAAGTATGG+TGG | 0.625018 | 4.2:+38779087 | MS.gene28350:CDS |
| TGAAGCGCCGGATTTGGGGT+CGG | 0.626915 | 4.2:-38776199 | None:intergenic |
| TGATGCAATTAACAATGCTG+AGG | 0.635618 | 4.2:+38778786 | MS.gene28350:CDS |
| ACTATGGGATGTGAGAAAGC+TGG | 0.636572 | 4.2:+38777890 | MS.gene28350:CDS |
| CAACTTCCCAAAACAAACCA+AGG | 0.641374 | 4.2:-38776111 | None:intergenic |
| GATGCACCAGTGGACACTAT+GGG | 0.645959 | 4.2:+38777875 | MS.gene28350:CDS |
| ACCTGCGGCTTCCTTGAACG+CGG | 0.653221 | 4.2:-38780772 | None:intergenic |
| TTACTACTTACCACTATGTG+TGG | 0.653730 | 4.2:-38776876 | None:intergenic |
| ACAAACCAAGGAGACGACGA+GGG | 0.655970 | 4.2:-38776099 | None:intergenic |
| TTGCATGGAACAATGTCCAA+GGG | 0.659236 | 4.2:+38779272 | MS.gene28350:CDS |
| GTGTTCTGGAGATGCACCAG+TGG | 0.660918 | 4.2:+38777865 | MS.gene28350:CDS |
| ACGCTGGGAAGAGACGCTTG+AGG | 0.696005 | 4.2:+38777826 | MS.gene28350:CDS |
| ACACCTCTAAGACCTCGCTG+TGG | 0.758067 | 4.2:+38780720 | MS.gene28350:CDS |
| ATACTACATTCTCCACAGCG+AGG | 0.775449 | 4.2:-38780732 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTTCAAATTTAATAAAT+CGG | + | chr4.2:38779970-38779989 | MS.gene28350:intron | 10.0% |
| !! | TTTATTATAAAAACACAAAT+GGG | - | chr4.2:38776470-38776489 | None:intergenic | 10.0% |
| !! | CTTTATTATAAAAACACAAA+TGG | - | chr4.2:38776471-38776490 | None:intergenic | 15.0% |
| !! | TATATACTAAAAACTTTAGA+AGG | - | chr4.2:38778375-38778394 | None:intergenic | 15.0% |
| !! | TGGATAATAATTTAAGAAAA+TGG | - | chr4.2:38780278-38780297 | None:intergenic | 15.0% |
| !!! | AAATGTGTTTTTATGAATAT+AGG | + | chr4.2:38778724-38778743 | MS.gene28350:intron | 15.0% |
| !!! | AAATTAGTCTTATGTTAATA+TGG | - | chr4.2:38777705-38777724 | None:intergenic | 15.0% |
| !!! | AACATAATCAAATTCTAAAA+AGG | + | chr4.2:38777479-38777498 | MS.gene28350:intron | 15.0% |
| !!! | AATGTGTTTTTATGAATATA+GGG | + | chr4.2:38778725-38778744 | MS.gene28350:intron | 15.0% |
| !!! | AATTAAAAGAAGTATAATAC+AGG | - | chr4.2:38777942-38777961 | None:intergenic | 15.0% |
| !!! | ACATAATCAAATTCTAAAAA+GGG | + | chr4.2:38777480-38777499 | MS.gene28350:intron | 15.0% |
| !!! | ATAATACTTGTTAAATTTTC+TGG | + | chr4.2:38778392-38778411 | MS.gene28350:intron | 15.0% |
| !!! | ATTAAAAGAAGTATAATACA+GGG | - | chr4.2:38777941-38777960 | None:intergenic | 15.0% |
| !!! | TAATACTTTTAAAAGAAACA+GGG | - | chr4.2:38778848-38778867 | None:intergenic | 15.0% |
| !!! | TTAATTTGATATTTCAGTTT+GGG | + | chr4.2:38777956-38777975 | MS.gene28350:intron | 15.0% |
| !!! | TTCTTTTAAAAGTATTACAT+TGG | + | chr4.2:38778851-38778870 | MS.gene28350:intron | 15.0% |
| !!! | TTTAATTTGATATTTCAGTT+TGG | + | chr4.2:38777955-38777974 | MS.gene28350:intron | 15.0% |
| !! | AATTGTTAATCAAGAAACTT+GGG | + | chr4.2:38777363-38777382 | MS.gene28350:intron | 20.0% |
| !! | ATATAAAGGATCAAATGAAT+TGG | + | chr4.2:38776616-38776635 | MS.gene28350:CDS | 20.0% |
| !! | CAGATAGTTAAAACTTAAAA+GGG | + | chr4.2:38778486-38778505 | MS.gene28350:intron | 20.0% |
| !! | GTACTAAAATATATACACAA+AGG | - | chr4.2:38777557-38777576 | None:intergenic | 20.0% |
| !! | TAATCTTGTATTGAATTGAT+TGG | + | chr4.2:38778177-38778196 | MS.gene28350:intron | 20.0% |
| !! | TAATTGTTAATCAAGAAACT+TGG | + | chr4.2:38777362-38777381 | MS.gene28350:intron | 20.0% |
| !! | TAATTTGATATTTCAGTTTG+GGG | + | chr4.2:38777957-38777976 | MS.gene28350:intron | 20.0% |
| !! | TAGTTAACTTATTTAACGAA+CGG | + | chr4.2:38778608-38778627 | MS.gene28350:intron | 20.0% |
| !!! | AACACAAGAAATTTTCAATT+TGG | + | chr4.2:38780606-38780625 | MS.gene28350:intron | 20.0% |
| !!! | ATGTGTTTTTATGAATATAG+GGG | + | chr4.2:38778726-38778745 | MS.gene28350:intron | 20.0% |
| !!! | ATTGCTTCTTTGTTTTTAAT+GGG | + | chr4.2:38776354-38776373 | MS.gene28350:intron | 20.0% |
| !!! | ATTTAGGAAGTTTAAAATCA+TGG | + | chr4.2:38776432-38776451 | MS.gene28350:intron | 20.0% |
| !!! | GTAATACTTTTAAAAGAAAC+AGG | - | chr4.2:38778849-38778868 | None:intergenic | 20.0% |
| !!! | TTATTGTGTCAATTCTTTTA+AGG | + | chr4.2:38778948-38778967 | MS.gene28350:intron | 20.0% |
| !!! | TTATTTGTTGATTTATGTCT+TGG | + | chr4.2:38777993-38778012 | MS.gene28350:intron | 20.0% |
| !!! | TTTTCTCAATCTTTCTATTT+AGG | + | chr4.2:38776416-38776435 | MS.gene28350:intron | 20.0% |
| ! | AAAATTGCACAGGTTAAATT+TGG | - | chr4.2:38780527-38780546 | None:intergenic | 25.0% |
| ! | AAGTAGTAAATAGTTGCAAA+AGG | + | chr4.2:38776890-38776909 | MS.gene28350:intron | 25.0% |
| ! | AATAATTAATGTAGCAAAGC+AGG | + | chr4.2:38777387-38777406 | MS.gene28350:intron | 25.0% |
| ! | AATATTTGTCTCATGAAGTA+TGG | + | chr4.2:38779084-38779103 | MS.gene28350:CDS | 25.0% |
| ! | AGTAGTAAATAGTTGCAAAA+GGG | + | chr4.2:38776891-38776910 | MS.gene28350:intron | 25.0% |
| ! | ATATAAGAGTAAAATTGCAC+AGG | - | chr4.2:38780537-38780556 | None:intergenic | 25.0% |
| ! | ATATATACACAAAGGAAAGA+TGG | - | chr4.2:38777549-38777568 | None:intergenic | 25.0% |
| ! | ATGAAAAACACCTAAAACAA+TGG | - | chr4.2:38777302-38777321 | None:intergenic | 25.0% |
| ! | ATTGAAGACTTTGCATATAA+AGG | + | chr4.2:38776602-38776621 | MS.gene28350:CDS | 25.0% |
| ! | CACATACTTCAAAAGTAAAA+TGG | - | chr4.2:38778641-38778660 | None:intergenic | 25.0% |
| ! | CCAGATAGTTAAAACTTAAA+AGG | + | chr4.2:38778485-38778504 | MS.gene28350:intron | 25.0% |
| ! | GCATTATATAATACCAAAAG+AGG | - | chr4.2:38777337-38777356 | None:intergenic | 25.0% |
| ! | GCTAAACTACAATCTTAATA+TGG | - | chr4.2:38779660-38779679 | None:intergenic | 25.0% |
| ! | TAAAATGTAACCAAATGTGT+AGG | - | chr4.2:38780249-38780268 | None:intergenic | 25.0% |
| ! | TATATCTGTTGAATATCAAC+AGG | + | chr4.2:38780674-38780693 | MS.gene28350:intron | 25.0% |
| ! | TCAAAGAAGAAAAAGAATAC+TGG | + | chr4.2:38778514-38778533 | MS.gene28350:intron | 25.0% |
| ! | TTTCCTCTATTAATCTTGAT+CGG | + | chr4.2:38779940-38779959 | MS.gene28350:intron | 25.0% |
| !! | ATACTTTTATAAGATCGACA+AGG | - | chr4.2:38776789-38776808 | None:intergenic | 25.0% |
| !! | GATAACAGAAAATAATTTGC+AGG | - | chr4.2:38779505-38779524 | None:intergenic | 25.0% |
| !! | TACTTTTATAAGATCGACAA+GGG | - | chr4.2:38776788-38776807 | None:intergenic | 25.0% |
| !! | TTGATTTTGTTGAAGTTTTG+TGG | - | chr4.2:38776289-38776308 | None:intergenic | 25.0% |
| !! | TTTGAGTGATTTTCAAACAT+TGG | - | chr4.2:38776965-38776984 | None:intergenic | 25.0% |
| !!! | AAATGTATCCATTTTGTTTG+TGG | + | chr4.2:38779528-38779547 | MS.gene28350:intron | 25.0% |
| !!! | ATAACATGGGAATTTTGATA+AGG | - | chr4.2:38778269-38778288 | None:intergenic | 25.0% |
| !!! | CATTGCTTCTTTGTTTTTAA+TGG | + | chr4.2:38776353-38776372 | MS.gene28350:intron | 25.0% |
| !!! | CATTTTTTTTTGGGTTGATT+TGG | + | chr4.2:38779566-38779585 | MS.gene28350:intron | 25.0% |
| !!! | CCTTTTAAGTTTTAACTATC+TGG | - | chr4.2:38778488-38778507 | None:intergenic | 25.0% |
| !!! | TATGTGTTTTTGTAGAAGTT+TGG | + | chr4.2:38776569-38776588 | MS.gene28350:intron | 25.0% |
| !!! | TCATCATGGCATTTTTTTTT+GGG | + | chr4.2:38779557-38779576 | MS.gene28350:intron | 25.0% |
| !!! | TGCAATTTTTTTCAAGTTAG+TGG | - | chr4.2:38779064-38779083 | None:intergenic | 25.0% |
| !!! | TGTTTTAGTGCTTTATAACT+TGG | + | chr4.2:38780327-38780346 | MS.gene28350:intron | 25.0% |
| !!! | TTACATTGGTTCAAATGATT+TGG | + | chr4.2:38778865-38778884 | MS.gene28350:intron | 25.0% |
| !!! | TTCATCATGGCATTTTTTTT+TGG | + | chr4.2:38779556-38779575 | MS.gene28350:intron | 25.0% |
| !!! | TTTTAGGTAATTTCTAGAGT+GGG | + | chr4.2:38776919-38776938 | MS.gene28350:intron | 25.0% |
| !!! | TTTTTGTTTCTTCTTTTTCC+AGG | + | chr4.2:38779017-38779036 | MS.gene28350:intron | 25.0% |
| AAAAACACCTAAAACAATGG+TGG | - | chr4.2:38777299-38777318 | None:intergenic | 30.0% | |
| AAGAGACTTATGAAGATTCA+AGG | + | chr4.2:38778907-38778926 | MS.gene28350:intron | 30.0% | |
| AATAGGTTATGAATGTTGCA+TGG | + | chr4.2:38779257-38779276 | MS.gene28350:intron | 30.0% | |
| AATCTTCTTTCCTGATAACA+TGG | - | chr4.2:38778283-38778302 | None:intergenic | 30.0% | |
| AATTCTATCAGTCAAACAGT+AGG | - | chr4.2:38777733-38777752 | None:intergenic | 30.0% | |
| ACATTCTTGAGAAAATGTCA+TGG | - | chr4.2:38777605-38777624 | None:intergenic | 30.0% | |
| ACGTGATAAAGTGATAAGAT+CGG | + | chr4.2:38777036-38777055 | MS.gene28350:intron | 30.0% | |
| ATACCATGAGCTTCTATTTA+CGG | + | chr4.2:38777186-38777205 | MS.gene28350:intron | 30.0% | |
| ATCAAAATTCCCATGTTATC+AGG | + | chr4.2:38778270-38778289 | MS.gene28350:intron | 30.0% | |
| ATCTTCTTTCCTGATAACAT+GGG | - | chr4.2:38778282-38778301 | None:intergenic | 30.0% | |
| ATTAATAGAGGAAAGAAGCT+AGG | - | chr4.2:38779934-38779953 | None:intergenic | 30.0% | |
| ATTCTATCAGTCAAACAGTA+GGG | - | chr4.2:38777732-38777751 | None:intergenic | 30.0% | |
| ATTTCAGATTCCTTGAAGTT+GGG | - | chr4.2:38780051-38780070 | None:intergenic | 30.0% | |
| CAATTAATCCTCTATTGGTA+TGG | + | chr4.2:38780489-38780508 | MS.gene28350:intron | 30.0% | |
| CATACCAATAGAGGATTAAT+TGG | - | chr4.2:38780491-38780510 | None:intergenic | 30.0% | |
| GCTATGGGAACAAATAAATT+AGG | - | chr4.2:38779419-38779438 | None:intergenic | 30.0% | |
| GTTCTTTCCTCTATTAAAGA+TGG | - | chr4.2:38779625-38779644 | None:intergenic | 30.0% | |
| TACTTCAAAAGTAAAATGGC+AGG | - | chr4.2:38778637-38778656 | None:intergenic | 30.0% | |
| TAGAAGCTCATGGTATAATT+CGG | - | chr4.2:38777182-38777201 | None:intergenic | 30.0% | |
| TATGCAAAGTCTTCAATTTC+AGG | - | chr4.2:38776599-38776618 | None:intergenic | 30.0% | |
| TATTTCAGATTCCTTGAAGT+TGG | - | chr4.2:38780052-38780071 | None:intergenic | 30.0% | |
| TGAGATTACATCTTACAAAG+TGG | + | chr4.2:38779747-38779766 | MS.gene28350:intron | 30.0% | |
| TTACAATCTCTCTTTGTAAG+TGG | + | chr4.2:38780142-38780161 | MS.gene28350:intron | 30.0% | |
| TTGATAAAAGAGAAGATACC+AGG | - | chr4.2:38778312-38778331 | None:intergenic | 30.0% | |
| TTTAACTATCTGGTGTGAAT+CGG | - | chr4.2:38778478-38778497 | None:intergenic | 30.0% | |
| TTTCAGTTCAGCAAAAAACA+AGG | - | chr4.2:38777120-38777139 | None:intergenic | 30.0% | |
| ! | ACTTTTATAAGATCGACAAG+GGG | - | chr4.2:38776787-38776806 | None:intergenic | 30.0% |
| ! | CATTTCTGATTTTACTGCAA+CGG | - | chr4.2:38776816-38776835 | None:intergenic | 30.0% |
| ! | TAAAACAATGGTGGCTTTTA+GGG | - | chr4.2:38777290-38777309 | None:intergenic | 30.0% |
| ! | TAAATGCTTATCTCCTCTTT+TGG | + | chr4.2:38777321-38777340 | MS.gene28350:intron | 30.0% |
| ! | TGGGTAAATCAACTTTTTGA+TGG | - | chr4.2:38778818-38778837 | None:intergenic | 30.0% |
| ! | TTCAATATATTTGCTGCTGT+CGG | + | chr4.2:38779471-38779490 | MS.gene28350:intron | 30.0% |
| ! | TTGCAAAAGGGAATTGTTTT+AGG | + | chr4.2:38776903-38776922 | MS.gene28350:intron | 30.0% |
| !! | AAGGTTATGTTTGTTTTTCG+CGG | + | chr4.2:38778967-38778986 | MS.gene28350:intron | 30.0% |
| !! | ACTCTTCATTTTAACAATGC+TGG | + | chr4.2:38777415-38777434 | MS.gene28350:intron | 30.0% |
| !! | GTTTTAGGTAATTTCTAGAG+TGG | + | chr4.2:38776918-38776937 | MS.gene28350:intron | 30.0% |
| !!! | AAACAGGTTCCTTTTAAGTT+TGG | + | chr4.2:38779361-38779380 | MS.gene28350:intron | 30.0% |
| !!! | CTCAACGTATGATTTTTAGT+TGG | + | chr4.2:38778204-38778223 | MS.gene28350:intron | 30.0% |
| !!! | CTTTGGCTTTTTTGTTTCTT+CGG | - | chr4.2:38776251-38776270 | None:intergenic | 30.0% |
| AAAAGAAACAGGGAACATAC+TGG | - | chr4.2:38778838-38778857 | None:intergenic | 35.0% | |
| AAAGAAACAGGGAACATACT+GGG | - | chr4.2:38778837-38778856 | None:intergenic | 35.0% | |
| ACCAAGGATCATATCAATCA+TGG | + | chr4.2:38778337-38778356 | MS.gene28350:CDS | 35.0% | |
| ACCATGATTGATATGATCCT+TGG | - | chr4.2:38778341-38778360 | None:intergenic | 35.0% | |
| ACTTTATGAGTCTGTGTTGA+AGG | - | chr4.2:38776318-38776337 | None:intergenic | 35.0% | |
| AGTTACGTGATGTTAAGCTA+TGG | + | chr4.2:38779889-38779908 | MS.gene28350:intron | 35.0% | |
| ATAATACAGGGTCAAACCTT+AGG | - | chr4.2:38777929-38777948 | None:intergenic | 35.0% | |
| ATTACCCTAAGCAAAAGTTC+AGG | + | chr4.2:38776996-38777015 | MS.gene28350:intron | 35.0% | |
| ATTTGTCTCATGAAGTATGG+TGG | + | chr4.2:38779087-38779106 | MS.gene28350:CDS | 35.0% | |
| CACCTATAAGTCTATAGCAA+TGG | + | chr4.2:38777654-38777673 | MS.gene28350:intron | 35.0% | |
| CATCCGATCAAGATTAATAG+AGG | - | chr4.2:38779946-38779965 | None:intergenic | 35.0% | |
| CCAACTCTTGAAATGAGTAA+TGG | - | chr4.2:38778123-38778142 | None:intergenic | 35.0% | |
| CCATTACTCATTTCAAGAGT+TGG | + | chr4.2:38778120-38778139 | MS.gene28350:intron | 35.0% | |
| CGAAGAAACAAAAAAGCCAA+AGG | + | chr4.2:38776249-38776268 | MS.gene28350:CDS | 35.0% | |
| CGTTCAACTCTAACAAAGAT+CGG | - | chr4.2:38777221-38777240 | None:intergenic | 35.0% | |
| CTCCATTGCTATAGACTTAT+AGG | - | chr4.2:38777659-38777678 | None:intergenic | 35.0% | |
| CTTTAATAGAGGAAAGAACC+AGG | + | chr4.2:38779626-38779645 | MS.gene28350:intron | 35.0% | |
| GAAATGAGTAATGGCTATAC+TGG | - | chr4.2:38778114-38778133 | None:intergenic | 35.0% | |
| GAAGTCTACCACAAACAAAA+TGG | - | chr4.2:38779539-38779558 | None:intergenic | 35.0% | |
| GATTACACGAATAGTTGACA+AGG | - | chr4.2:38778162-38778181 | None:intergenic | 35.0% | |
| GATTGATATGATCCTTGGTT+TGG | - | chr4.2:38778336-38778355 | None:intergenic | 35.0% | |
| GGATCCAATTAATCCTCTAT+TGG | + | chr4.2:38780484-38780503 | MS.gene28350:CDS | 35.0% | |
| TACCATGAGCTTCTATTTAC+GGG | + | chr4.2:38777187-38777206 | MS.gene28350:intron | 35.0% | |
| TATTTGTTCCCATAGCATCT+TGG | + | chr4.2:38779423-38779442 | MS.gene28350:intron | 35.0% | |
| TCAGCATTGTTAATTGCATC+AGG | - | chr4.2:38778787-38778806 | None:intergenic | 35.0% | |
| TCTGTTGAATATCAACAGGT+TGG | + | chr4.2:38780678-38780697 | MS.gene28350:intron | 35.0% | |
| TGAGTTTACCATACCAATAG+AGG | - | chr4.2:38780500-38780519 | None:intergenic | 35.0% | |
| TGATGCAATTAACAATGCTG+AGG | + | chr4.2:38778786-38778805 | MS.gene28350:CDS | 35.0% | |
| TTACCCTAAGCAAAAGTTCA+GGG | + | chr4.2:38776997-38777016 | MS.gene28350:intron | 35.0% | |
| TTACTACTTACCACTATGTG+TGG | - | chr4.2:38776879-38776898 | None:intergenic | 35.0% | |
| TTGCTGAACTGAAACTGATT+AGG | + | chr4.2:38777126-38777145 | MS.gene28350:intron | 35.0% | |
| TTTAATTATCCGTCCACTGT+AGG | + | chr4.2:38777244-38777263 | MS.gene28350:intron | 35.0% | |
| TTTCTTGTGTTGAGTCTCAT+CGG | - | chr4.2:38780597-38780616 | None:intergenic | 35.0% | |
| ! | AGTAGTTGCTCAATTTTGCT+AGG | - | chr4.2:38779120-38779139 | None:intergenic | 35.0% |
| ! | ATGCTGGCTGTTTAATCATT+TGG | + | chr4.2:38777431-38777450 | MS.gene28350:intron | 35.0% |
| ! | CTAAAACAATGGTGGCTTTT+AGG | - | chr4.2:38777291-38777310 | None:intergenic | 35.0% |
| ! | CTAAAAGCCACCATTGTTTT+AGG | + | chr4.2:38777289-38777308 | MS.gene28350:intron | 35.0% |
| ! | CTTCAGATTAAAGGTGTGTT+TGG | + | chr4.2:38780179-38780198 | MS.gene28350:intron | 35.0% |
| ! | GAATATCAACAGGTTGGATT+TGG | + | chr4.2:38780684-38780703 | MS.gene28350:intron | 35.0% |
| ! | GATGTAGTTTTTCTGTCACT+TGG | + | chr4.2:38780349-38780368 | MS.gene28350:intron | 35.0% |
| ! | GATTTTGTTAGTGGCACAAT+AGG | + | chr4.2:38779240-38779259 | MS.gene28350:intron | 35.0% |
| ! | GTTTCTTCTTTTTCCAGGTT+GGG | + | chr4.2:38779022-38779041 | MS.gene28350:intron | 35.0% |
| ! | TCTTTTATCAAGCCAAACCA+AGG | + | chr4.2:38778321-38778340 | MS.gene28350:CDS | 35.0% |
| ! | TGTTTCTTCTTTTTCCAGGT+TGG | + | chr4.2:38779021-38779040 | MS.gene28350:intron | 35.0% |
| ! | TTATAGATGCATTTTGCGAC+TGG | + | chr4.2:38779780-38779799 | MS.gene28350:intron | 35.0% |
| !! | ATTTCTAGAGTGGGTAAATG+TGG | + | chr4.2:38776928-38776947 | MS.gene28350:intron | 35.0% |
| !! | TCTGAAGCTGATTTTGTTAG+TGG | + | chr4.2:38779231-38779250 | MS.gene28350:intron | 35.0% |
| !! | TTGTTGAAGTTTTGTGGTAG+TGG | - | chr4.2:38776283-38776302 | None:intergenic | 35.0% |
| !!! | TAAGCAGATCGTTTTGAAGA+AGG | - | chr4.2:38778762-38778781 | None:intergenic | 35.0% |
| AAATGTGTAGGTGTAGGTGT+AGG | - | chr4.2:38780237-38780256 | None:intergenic | 40.0% | |
| AACTGATTAGGTCACTGTCT+AGG | + | chr4.2:38777138-38777157 | MS.gene28350:intron | 40.0% | |
| AATCCTACAGTCAGTGTGTT+TGG | - | chr4.2:38776745-38776764 | None:intergenic | 40.0% | |
| ACACAATAACATGCAAGCTG+AGG | - | chr4.2:38778937-38778956 | None:intergenic | 40.0% | |
| ACACCTTAAGTCTACTAGTC+TGG | + | chr4.2:38777756-38777775 | MS.gene28350:intron | 40.0% | |
| ACACGAATAGTTGACAAGGT+TGG | - | chr4.2:38778158-38778177 | None:intergenic | 40.0% | |
| ACCATGAGCTTCTATTTACG+GGG | + | chr4.2:38777188-38777207 | MS.gene28350:intron | 40.0% | |
| AGACTAGTAGACTTAAGGTG+TGG | - | chr4.2:38777757-38777776 | None:intergenic | 40.0% | |
| AGTTGTGCCAGTAACTGATT+CGG | + | chr4.2:38779857-38779876 | MS.gene28350:intron | 40.0% | |
| ATCCCAGACTAGTAGACTTA+AGG | - | chr4.2:38777762-38777781 | None:intergenic | 40.0% | |
| CAACTTCCCAAAACAAACCA+AGG | - | chr4.2:38776114-38776133 | None:intergenic | 40.0% | |
| CATACCAAATGAGCCATCTT+AGG | - | chr4.2:38779162-38779181 | None:intergenic | 40.0% | |
| CCATACAATTCAAGTCGAGT+TGG | - | chr4.2:38779198-38779217 | None:intergenic | 40.0% | |
| CTATTAAAGATGGACAACCC+AGG | - | chr4.2:38779615-38779634 | None:intergenic | 40.0% | |
| CTTAATATGGTATCAGAGCC+TGG | - | chr4.2:38779647-38779666 | None:intergenic | 40.0% | |
| CTTACAGTGACACGTAAACA+TGG | - | chr4.2:38780298-38780317 | None:intergenic | 40.0% | |
| GAGTATCTACACATATCCCT+TGG | - | chr4.2:38779291-38779310 | None:intergenic | 40.0% | |
| GAGTGGGTAAATGTGGTTTA+CGG | + | chr4.2:38776935-38776954 | MS.gene28350:intron | 40.0% | |
| GATTCCAACTGAAAGTGAAG+TGG | + | chr4.2:38776847-38776866 | MS.gene28350:CDS | 40.0% | |
| GGGTTGTCCATCTTTAATAG+AGG | + | chr4.2:38779615-38779634 | MS.gene28350:intron | 40.0% | |
| GTAACCAAATGTGTAGGTGT+AGG | - | chr4.2:38780243-38780262 | None:intergenic | 40.0% | |
| GTGATGCCACCAAACTTAAA+AGG | - | chr4.2:38779373-38779392 | None:intergenic | 40.0% | |
| GTTTGTGGTAGACTTCATCA+TGG | + | chr4.2:38779543-38779562 | MS.gene28350:intron | 40.0% | |
| TAAAGTGATAAGATCGGCGT+TGG | + | chr4.2:38777042-38777061 | MS.gene28350:intron | 40.0% | |
| TACACCTACACCTACACATT+TGG | + | chr4.2:38780236-38780255 | MS.gene28350:intron | 40.0% | |
| TGTAGGATTCCTTGACTGTA+GGG | + | chr4.2:38776756-38776775 | MS.gene28350:intron | 40.0% | |
| TGTTAATGCATTCACGCAGT+CGG | + | chr4.2:38776682-38776701 | MS.gene28350:intron | 40.0% | |
| TTCTCAACCGAATCAGTTAC+TGG | - | chr4.2:38779867-38779886 | None:intergenic | 40.0% | |
| TTCTCGTATAAAACCCAACC+TGG | - | chr4.2:38779038-38779057 | None:intergenic | 40.0% | |
| TTGCATGGAACAATGTCCAA+GGG | + | chr4.2:38779272-38779291 | MS.gene28350:CDS | 40.0% | |
| TTTGTAAGTGGCTTGAACAC+CGG | + | chr4.2:38780154-38780173 | MS.gene28350:intron | 40.0% | |
| ! | ACACCTTTAATCTGAAGTGC+CGG | - | chr4.2:38780176-38780195 | None:intergenic | 40.0% |
| ! | ATTCGCAAAATGAGGTGTTC+TGG | + | chr4.2:38777851-38777870 | MS.gene28350:CDS | 40.0% |
| ! | CACCTTAAGTCTACTAGTCT+GGG | + | chr4.2:38777757-38777776 | MS.gene28350:intron | 40.0% |
| ! | CCAACTCGACTTGAATTGTA+TGG | + | chr4.2:38779195-38779214 | MS.gene28350:intron | 40.0% |
| !! | TTGAGGGTATTCGCAAAATG+AGG | + | chr4.2:38777843-38777862 | MS.gene28350:CDS | 40.0% |
| !! | TTTCTGGCTTCTGTACATAG+CGG | + | chr4.2:38778408-38778427 | MS.gene28350:intron | 40.0% |
| !!! | CAGGTTCCTTTTAAGTTTGG+TGG | + | chr4.2:38779364-38779383 | MS.gene28350:intron | 40.0% |
| !!! | CTTGGTTTGTTTTGGGAAGT+TGG | + | chr4.2:38776112-38776131 | MS.gene28350:CDS | 40.0% |
| !!! | TCGTCTCCTTGGTTTGTTTT+GGG | + | chr4.2:38776105-38776124 | MS.gene28350:CDS | 40.0% |
| !!! | TTGAAGTTTTGTGGTAGTGG+TGG | - | chr4.2:38776280-38776299 | None:intergenic | 40.0% |
| ACACCGGCACTTCAGATTAA+AGG | + | chr4.2:38780170-38780189 | MS.gene28350:intron | 45.0% | |
| ACTATGGGATGTGAGAAAGC+TGG | + | chr4.2:38777890-38777909 | MS.gene28350:CDS | 45.0% | |
| ACTGCAATTGTGGCTTCCAA+GGG | + | chr4.2:38780454-38780473 | MS.gene28350:CDS | 45.0% | |
| AGGTCCTAAGATGGCTCATT+TGG | + | chr4.2:38779155-38779174 | MS.gene28350:CDS | 45.0% | |
| AGGTTGCTTCTCTAATCGCA+AGG | - | chr4.2:38779595-38779614 | None:intergenic | 45.0% | |
| AGTACAGCATGCTTGTGTGT+TGG | + | chr4.2:38777572-38777591 | MS.gene28350:intron | 45.0% | |
| AGTGACACTCTTGTCTCTTC+AGG | - | chr4.2:38780437-38780456 | None:intergenic | 45.0% | |
| AGTTAAATCACCTGCACGCT+GGG | + | chr4.2:38777811-38777830 | MS.gene28350:intron | 45.0% | |
| ATACAGGGTCAAACCTTAGG+AGG | - | chr4.2:38777926-38777945 | None:intergenic | 45.0% | |
| ATACTACATTCTCCACAGCG+AGG | - | chr4.2:38780735-38780754 | None:intergenic | 45.0% | |
| ATTGGATCCCATTCTTCCCT+TGG | - | chr4.2:38780473-38780492 | None:intergenic | 45.0% | |
| CTACTACAACTTCCAGGCAT+AGG | + | chr4.2:38779135-38779154 | MS.gene28350:CDS | 45.0% | |
| CTGTAGGATTCCTTGACTGT+AGG | + | chr4.2:38776755-38776774 | MS.gene28350:intron | 45.0% | |
| CTTCTTGTTCCTTCCAGACT+TGG | - | chr4.2:38780820-38780839 | None:intergenic | 45.0% | |
| GAAGCCACTTCACTTTCAGT+TGG | - | chr4.2:38776854-38776873 | None:intergenic | 45.0% | |
| GACGTAGACATGAACTGGTT+GGG | - | chr4.2:38776229-38776248 | None:intergenic | 45.0% | |
| GAGCAACTACTACAACTTCC+AGG | + | chr4.2:38779129-38779148 | MS.gene28350:CDS | 45.0% | |
| GTCGTCTGATCTTGATCAGT+CGG | + | chr4.2:38776715-38776734 | MS.gene28350:intron | 45.0% | |
| GTGTTTCATATGGCCTACAG+TGG | - | chr4.2:38777260-38777279 | None:intergenic | 45.0% | |
| GTTGCATGGAACAATGTCCA+AGG | + | chr4.2:38779271-38779290 | MS.gene28350:CDS | 45.0% | |
| TAGTTAAATCACCTGCACGC+TGG | + | chr4.2:38777810-38777829 | MS.gene28350:intron | 45.0% | |
| TATCACGTGTAAGAACGTCG+AGG | - | chr4.2:38777024-38777043 | None:intergenic | 45.0% | |
| TCCCCGTAAATAGAAGCTCA+TGG | - | chr4.2:38777192-38777211 | None:intergenic | 45.0% | |
| TGCGATTAGAGAAGCAACCT+GGG | + | chr4.2:38779595-38779614 | MS.gene28350:intron | 45.0% | |
| TGGGTAAATGTGGTTTACGG+TGG | + | chr4.2:38776938-38776957 | MS.gene28350:intron | 45.0% | |
| TTCATATGGCCTACAGTGGA+CGG | - | chr4.2:38777256-38777275 | None:intergenic | 45.0% | |
| TTCGTGATCTCCCAACTTCA+AGG | + | chr4.2:38780038-38780057 | MS.gene28350:intron | 45.0% | |
| TTGCGATTAGAGAAGCAACC+TGG | + | chr4.2:38779594-38779613 | MS.gene28350:intron | 45.0% | |
| ! | AGGACCCTGAACTTTTGCTT+AGG | - | chr4.2:38777004-38777023 | None:intergenic | 45.0% |
| ! | GAAGCTAGGCTAGCTAACTA+TGG | - | chr4.2:38779920-38779939 | None:intergenic | 45.0% |
| ! | GGACCCTGAACTTTTGCTTA+GGG | - | chr4.2:38777003-38777022 | None:intergenic | 45.0% |
| ! | GTTCCAAACACACTGACTGT+AGG | + | chr4.2:38776739-38776758 | MS.gene28350:intron | 45.0% |
| !! | ACTTGGTGGATTTGGGAACT+GGG | - | chr4.2:38780803-38780822 | None:intergenic | 45.0% |
| !! | CAAGAGTGTCACTGCAATTG+TGG | + | chr4.2:38780444-38780463 | MS.gene28350:CDS | 45.0% |
| !! | CTTCCAGACTTGGTGGATTT+GGG | - | chr4.2:38780810-38780829 | None:intergenic | 45.0% |
| !! | GGAAAGAAGATTTGCTGTCC+TGG | + | chr4.2:38778291-38778310 | MS.gene28350:intron | 45.0% |
| !! | GGGTGAGGAAGTGTTTCATA+TGG | - | chr4.2:38777270-38777289 | None:intergenic | 45.0% |
| !!! | GATCGTTTTGAAGAAGGCGT+TGG | - | chr4.2:38778756-38778775 | None:intergenic | 45.0% |
| !!! | GTCGTCTCCTTGGTTTGTTT+TGG | + | chr4.2:38776104-38776123 | MS.gene28350:CDS | 45.0% |
| AACAAACCAAGGAGACGACG+AGG | - | chr4.2:38776103-38776122 | None:intergenic | 50.0% | |
| ACAAACCAAGGAGACGACGA+GGG | - | chr4.2:38776102-38776121 | None:intergenic | 50.0% | |
| AGATGCACCAGTGGACACTA+TGG | + | chr4.2:38777874-38777893 | MS.gene28350:CDS | 50.0% | |
| AGTTGGGAGATCACGAAGCT+TGG | - | chr4.2:38780035-38780054 | None:intergenic | 50.0% | |
| ATGTCCACCGCATCTGCAAT+CGG | + | chr4.2:38779311-38779330 | MS.gene28350:CDS | 50.0% | |
| CACCAGCACCAAGATGCTAT+GGG | - | chr4.2:38779434-38779453 | None:intergenic | 50.0% | |
| CACTGCAATTGTGGCTTCCA+AGG | + | chr4.2:38780453-38780472 | MS.gene28350:CDS | 50.0% | |
| CCAAATCCACCAAGTCTGGA+AGG | + | chr4.2:38780808-38780827 | MS.gene28350:CDS | 50.0% | |
| CTCGGTTGGGTGTCAAGATT+GGG | + | chr4.2:38779334-38779353 | MS.gene28350:CDS | 50.0% | |
| CTTCGGACGTAGACATGAAC+TGG | - | chr4.2:38776234-38776253 | None:intergenic | 50.0% | |
| CTTGTTCCTTCCAGACTTGG+TGG | - | chr4.2:38780817-38780836 | None:intergenic | 50.0% | |
| GATGCACCAGTGGACACTAT+GGG | + | chr4.2:38777875-38777894 | MS.gene28350:CDS | 50.0% | |
| GCCAAATGCCAATGTGCAAC+TGG | - | chr4.2:38779812-38779831 | None:intergenic | 50.0% | |
| GCCAGTTGCACATTGGCATT+TGG | + | chr4.2:38779808-38779827 | MS.gene28350:intron | 50.0% | |
| GGACGTAGACATGAACTGGT+TGG | - | chr4.2:38776230-38776249 | None:intergenic | 50.0% | |
| GTAGGTGTAGGTGTAGGTGT+CGG | - | chr4.2:38780231-38780250 | None:intergenic | 50.0% | |
| GTCAAGATTGGGCACGAAAC+AGG | + | chr4.2:38779345-38779364 | MS.gene28350:CDS | 50.0% | |
| GTCGGAGAGTTTGATGGAAG+CGG | - | chr4.2:38776178-38776197 | None:intergenic | 50.0% | |
| GTGGCTTCCAAGGGAAGAAT+GGG | + | chr4.2:38780463-38780482 | MS.gene28350:CDS | 50.0% | |
| GTGGCTTCTACCACACATAG+TGG | + | chr4.2:38776866-38776885 | MS.gene28350:CDS | 50.0% | |
| GTTCCCAAATCCACCAAGTC+TGG | + | chr4.2:38780804-38780823 | MS.gene28350:CDS | 50.0% | |
| TCACATCCCATAGTGTCCAC+TGG | - | chr4.2:38777884-38777903 | None:intergenic | 50.0% | |
| TCCAGGCATAGGTCCTAAGA+TGG | + | chr4.2:38779146-38779165 | MS.gene28350:CDS | 50.0% | |
| TGTGGCTTCCAAGGGAAGAA+TGG | + | chr4.2:38780462-38780481 | MS.gene28350:CDS | 50.0% | |
| ! | GGTAGTGGTGGTGATTCCTT+TGG | - | chr4.2:38776268-38776287 | None:intergenic | 50.0% |
| ! | TGGTTCTACGCTACCTCCTA+AGG | + | chr4.2:38777910-38777929 | MS.gene28350:CDS | 50.0% |
| ! | TTCCCATAGCATCTTGGTGC+TGG | + | chr4.2:38779429-38779448 | MS.gene28350:intron | 50.0% |
| !! | CCTTCCAGACTTGGTGGATT+TGG | - | chr4.2:38780811-38780830 | None:intergenic | 50.0% |
| !! | GACTTGGTGGATTTGGGAAC+TGG | - | chr4.2:38780804-38780823 | None:intergenic | 50.0% |
| !!! | CAATGGTGGCTTTTAGGGTG+AGG | - | chr4.2:38777285-38777304 | None:intergenic | 50.0% |
| AACCGAGCCGATTGCAGATG+CGG | - | chr4.2:38779321-38779340 | None:intergenic | 55.0% | |
| CTTGTGTCCATCCGCGTTCA+AGG | + | chr4.2:38780761-38780780 | MS.gene28350:CDS | 55.0% | |
| GCACCAGCACCAAGATGCTA+TGG | - | chr4.2:38779435-38779454 | None:intergenic | 55.0% | |
| GCCATCTTAGGACCTATGCC+TGG | - | chr4.2:38779150-38779169 | None:intergenic | 55.0% | |
| GCTCGGTTGGGTGTCAAGAT+TGG | + | chr4.2:38779333-38779352 | MS.gene28350:CDS | 55.0% | |
| GGCATTTGGCAGTGACTGAC+TGG | + | chr4.2:38779822-38779841 | MS.gene28350:intron | 55.0% | |
| GGCTACTGCCAGTTGCACAT+TGG | + | chr4.2:38779801-38779820 | MS.gene28350:intron | 55.0% | |
| GTCGGAGTCGGAGAGTTTGA+TGG | - | chr4.2:38776184-38776203 | None:intergenic | 55.0% | |
| TCTCCACAGCGAGGTCTTAG+AGG | - | chr4.2:38780726-38780745 | None:intergenic | 55.0% | |
| !! | AAGCTGAAGCGCCGGATTTG+GGG | - | chr4.2:38776206-38776225 | None:intergenic | 55.0% |
| !! | ACACCTCTAAGACCTCGCTG+TGG | + | chr4.2:38780720-38780739 | MS.gene28350:CDS | 55.0% |
| !! | CATCTGCAATCGGCTCGGTT+GGG | + | chr4.2:38779321-38779340 | MS.gene28350:CDS | 55.0% |
| !! | GAAGCTGAAGCGCCGGATTT+GGG | - | chr4.2:38776207-38776226 | None:intergenic | 55.0% |
| !! | GTGTTCTGGAGATGCACCAG+TGG | + | chr4.2:38777865-38777884 | MS.gene28350:CDS | 55.0% |
| ACCAAGGAGACGACGAGGGA+AGG | - | chr4.2:38776098-38776117 | None:intergenic | 60.0% | |
| ACCTGCGGCTTCCTTGAACG+CGG | - | chr4.2:38780775-38780794 | None:intergenic | 60.0% | |
| ACGCTGGGAAGAGACGCTTG+AGG | + | chr4.2:38777826-38777845 | MS.gene28350:CDS | 60.0% | |
| CACCGCATCTGCAATCGGCT+CGG | + | chr4.2:38779316-38779335 | MS.gene28350:CDS | 60.0% | |
| CGCTGGGAAGAGACGCTTGA+GGG | + | chr4.2:38777827-38777846 | MS.gene28350:CDS | 60.0% | |
| GGGAACTGGGCTTGTACCTG+CGG | - | chr4.2:38780790-38780809 | None:intergenic | 60.0% | |
| GGGGCGATTCCCTACAGTCA+AGG | - | chr4.2:38776768-38776787 | None:intergenic | 60.0% | |
| TCCGACTCCGACCCCAAATC+CGG | + | chr4.2:38776192-38776211 | MS.gene28350:CDS | 60.0% | |
| TCCTTCCCTCGTCGTCTCCT+TGG | + | chr4.2:38776094-38776113 | MS.gene28350:CDS | 60.0% | |
| TGGTTGGGAAGCTGAAGCGC+CGG | - | chr4.2:38776214-38776233 | None:intergenic | 60.0% | |
| !! | GCATCTGCAATCGGCTCGGT+TGG | + | chr4.2:38779320-38779339 | MS.gene28350:CDS | 60.0% |
| !! | GGAAGCTGAAGCGCCGGATT+TGG | - | chr4.2:38776208-38776227 | None:intergenic | 60.0% |
| !! | TGAAGCGCCGGATTTGGGGT+CGG | - | chr4.2:38776202-38776221 | None:intergenic | 60.0% |
| AGCGTCTCTTCCCAGCGTGC+AGG | - | chr4.2:38777824-38777843 | None:intergenic | 65.0% | |
| CGAGCCGATTGCAGATGCGG+TGG | - | chr4.2:38779318-38779337 | None:intergenic | 65.0% | |
| GCGGCTTCCTTGAACGCGGA+TGG | - | chr4.2:38780771-38780790 | None:intergenic | 65.0% | |
| TCCGCGTTCAAGGAAGCCGC+AGG | + | chr4.2:38780771-38780790 | MS.gene28350:CDS | 65.0% | |
| ! | GCCGGATTTGGGGTCGGAGT+CGG | - | chr4.2:38776196-38776215 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 38776087 | 38780845 | 38776087 | ID=MS.gene28350 |
| chr4.2 | mRNA | 38776087 | 38780845 | 38776087 | ID=MS.gene28350.t1;Parent=MS.gene28350 |
| chr4.2 | exon | 38776087 | 38776335 | 38776087 | ID=MS.gene28350.t1.exon1;Parent=MS.gene28350.t1 |
| chr4.2 | CDS | 38776087 | 38776335 | 38776087 | ID=cds.MS.gene28350.t1;Parent=MS.gene28350.t1 |
| chr4.2 | exon | 38776584 | 38776647 | 38776584 | ID=MS.gene28350.t1.exon2;Parent=MS.gene28350.t1 |
| chr4.2 | CDS | 38776584 | 38776647 | 38776584 | ID=cds.MS.gene28350.t1;Parent=MS.gene28350.t1 |
| chr4.2 | exon | 38776822 | 38776887 | 38776822 | ID=MS.gene28350.t1.exon3;Parent=MS.gene28350.t1 |
| chr4.2 | CDS | 38776822 | 38776887 | 38776822 | ID=cds.MS.gene28350.t1;Parent=MS.gene28350.t1 |
| chr4.2 | exon | 38777813 | 38777931 | 38777813 | ID=MS.gene28350.t1.exon4;Parent=MS.gene28350.t1 |
| chr4.2 | CDS | 38777813 | 38777931 | 38777813 | ID=cds.MS.gene28350.t1;Parent=MS.gene28350.t1 |
| chr4.2 | exon | 38778292 | 38778358 | 38778292 | ID=MS.gene28350.t1.exon5;Parent=MS.gene28350.t1 |
| chr4.2 | CDS | 38778292 | 38778358 | 38778292 | ID=cds.MS.gene28350.t1;Parent=MS.gene28350.t1 |
| chr4.2 | exon | 38778746 | 38778837 | 38778746 | ID=MS.gene28350.t1.exon6;Parent=MS.gene28350.t1 |
| chr4.2 | CDS | 38778746 | 38778837 | 38778746 | ID=cds.MS.gene28350.t1;Parent=MS.gene28350.t1 |
| chr4.2 | exon | 38779039 | 38779176 | 38779039 | ID=MS.gene28350.t1.exon7;Parent=MS.gene28350.t1 |
| chr4.2 | CDS | 38779039 | 38779176 | 38779039 | ID=cds.MS.gene28350.t1;Parent=MS.gene28350.t1 |
| chr4.2 | exon | 38779262 | 38779366 | 38779262 | ID=MS.gene28350.t1.exon8;Parent=MS.gene28350.t1 |
| chr4.2 | CDS | 38779262 | 38779366 | 38779262 | ID=cds.MS.gene28350.t1;Parent=MS.gene28350.t1 |
| chr4.2 | exon | 38780422 | 38780505 | 38780422 | ID=MS.gene28350.t1.exon9;Parent=MS.gene28350.t1 |
| chr4.2 | CDS | 38780422 | 38780505 | 38780422 | ID=cds.MS.gene28350.t1;Parent=MS.gene28350.t1 |
| chr4.2 | exon | 38780696 | 38780845 | 38780696 | ID=MS.gene28350.t1.exon10;Parent=MS.gene28350.t1 |
| chr4.2 | CDS | 38780696 | 38780845 | 38780696 | ID=cds.MS.gene28350.t1;Parent=MS.gene28350.t1 |
| Gene Sequence |
| Protein sequence |
