Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46509.t1 | RHN61142.1 | 90.8 | 381 | 31 | 1 | 1 | 377 | 27 | 407 | 2.70E-172 | 614.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46509.t1 | Q9SIC4 | 66.2 | 296 | 92 | 2 | 81 | 376 | 91 | 378 | 1.7e-109 | 397.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46509.t1 | A0A072UMM8 | 90.8 | 381 | 31 | 1 | 1 | 377 | 1 | 381 | 2.0e-172 | 614.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013797 | MS.gene46509 | PPI |
| MS.gene003895 | MS.gene46509 | PPI |
| MS.gene54568 | MS.gene46509 | PPI |
| MS.gene46509 | MS.gene49595 | PPI |
| MS.gene066288 | MS.gene46509 | PPI |
| MS.gene02580 | MS.gene46509 | PPI |
| MS.gene99026 | MS.gene46509 | PPI |
| MS.gene28350 | MS.gene46509 | PPI |
| MS.gene03207 | MS.gene46509 | PPI |
| MS.gene032779 | MS.gene46509 | PPI |
| MS.gene73789 | MS.gene46509 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46509.t1 | MTR_4g067060 | 93.176 | 381 | 22 | 1 | 1 | 377 | 1 | 381 | 0.0 | 724 |
| MS.gene46509.t1 | MTR_2g098660 | 60.952 | 315 | 91 | 3 | 44 | 358 | 29 | 311 | 7.74e-130 | 375 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46509.t1 | AT2G31450 | 61.329 | 331 | 103 | 4 | 35 | 358 | 48 | 360 | 1.04e-140 | 405 |
| MS.gene46509.t1 | AT2G31450 | 60.909 | 330 | 104 | 4 | 36 | 358 | 51 | 362 | 6.18e-139 | 400 |
| MS.gene46509.t1 | AT1G05900 | 57.273 | 330 | 127 | 5 | 36 | 358 | 47 | 369 | 2.31e-129 | 377 |
| MS.gene46509.t1 | AT1G05900 | 60.268 | 224 | 81 | 2 | 86 | 303 | 93 | 314 | 1.50e-93 | 283 |
Find 96 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCCAGACTTGGTGGATT+TGG | 0.159413 | 4.2:-38767449 | None:intergenic |
| CATACCAATAGAGGATTAAT+TGG | 0.189975 | 4.2:-38767129 | None:intergenic |
| GGAAGCTGAAGCGCCGGATT+TGG | 0.215287 | 4.2:-38762846 | None:intergenic |
| GAAGCTGAAGCGCCGGATTT+GGG | 0.221690 | 4.2:-38762845 | None:intergenic |
| CTTCCAGACTTGGTGGATTT+GGG | 0.227785 | 4.2:-38767448 | None:intergenic |
| GTCGTCTCCTTGGTTTGTTT+TGG | 0.239443 | 4.2:+38762745 | MS.gene46509:CDS |
| TATGCAAAGTCTTCAATTTC+AGG | 0.246614 | 4.2:-38763237 | None:intergenic |
| ATTGAAGACTTTGCATATAA+AGG | 0.268285 | 4.2:+38763243 | MS.gene46509:CDS |
| GACTTGGTGGATTTGGGAAC+TGG | 0.269436 | 4.2:-38767442 | None:intergenic |
| GAATATCAACAGGTTGGATT+TGG | 0.297080 | 4.2:+38767325 | MS.gene46509:intron |
| CTTCTTGTTCCTTCCAGACT+TGG | 0.315451 | 4.2:-38767458 | None:intergenic |
| GATTGATATGATCCTTGGTT+TGG | 0.364085 | 4.2:-38764974 | None:intergenic |
| CATACCAAATGAGCCATCTT+AGG | 0.370853 | 4.2:-38765800 | None:intergenic |
| TCTCCACAGCGAGGTCTTAG+AGG | 0.373498 | 4.2:-38767364 | None:intergenic |
| CTCGGTTGGGTGTCAAGATT+GGG | 0.380820 | 4.2:+38765975 | MS.gene46509:CDS |
| GCTCGGTTGGGTGTCAAGAT+TGG | 0.388498 | 4.2:+38765974 | MS.gene46509:CDS |
| ATTCGCAAAATGAGGTGTTC+TGG | 0.390605 | 4.2:+38764492 | MS.gene46509:CDS |
| AGTGACACTCTTGTCTCTTC+AGG | 0.393822 | 4.2:-38767075 | None:intergenic |
| TCCTTCCCTCGTCGTCTCCT+TGG | 0.394923 | 4.2:+38762735 | MS.gene46509:CDS |
| GTCAAGATTGGGCACGAAAC+AGG | 0.402226 | 4.2:+38765986 | MS.gene46509:CDS |
| GGATCCAATTAATCCTCTAT+TGG | 0.402662 | 4.2:+38767125 | MS.gene46509:CDS |
| CTTGTGTCCATCCGCGTTCA+AGG | 0.402709 | 4.2:+38767402 | MS.gene46509:CDS |
| CTTGTTCCTTCCAGACTTGG+TGG | 0.406554 | 4.2:-38767455 | None:intergenic |
| ACCATGATTGATATGATCCT+TGG | 0.409171 | 4.2:-38764979 | None:intergenic |
| AGGTCCTAAGATGGCTCATT+TGG | 0.410810 | 4.2:+38765796 | MS.gene46509:CDS |
| TCAGCATTGTTAATTGCATC+AGG | 0.415747 | 4.2:-38765425 | None:intergenic |
| CTTCGGACGTAGACATGAAC+TGG | 0.419195 | 4.2:-38762872 | None:intergenic |
| GTTCCCAAATCCACCAAGTC+TGG | 0.420070 | 4.2:+38767445 | MS.gene46509:CDS |
| ACTTTATGAGTCTGTGTTGA+AGG | 0.425998 | 4.2:-38762956 | None:intergenic |
| AGATGCACCAGTGGACACTA+TGG | 0.426856 | 4.2:+38764515 | MS.gene46509:CDS |
| GCATCTGCAATCGGCTCGGT+TGG | 0.427174 | 4.2:+38765961 | MS.gene46509:CDS |
| ACTTGGTGGATTTGGGAACT+GGG | 0.429229 | 4.2:-38767441 | None:intergenic |
| ATATAAAGGATCAAATGAAT+TGG | 0.433517 | 4.2:+38763257 | MS.gene46509:CDS |
| ATTGGATCCCATTCTTCCCT+TGG | 0.438799 | 4.2:-38767111 | None:intergenic |
| GAGCAACTACTACAACTTCC+AGG | 0.441588 | 4.2:+38765770 | MS.gene46509:CDS |
| AATATTTGTCTCATGAAGTA+TGG | 0.442213 | 4.2:+38765725 | MS.gene46509:CDS |
| CACTGCAATTGTGGCTTCCA+AGG | 0.443592 | 4.2:+38767094 | MS.gene46509:CDS |
| TGTGGCTTCCAAGGGAAGAA+TGG | 0.449796 | 4.2:+38767103 | MS.gene46509:CDS |
| GGTAGTGGTGGTGATTCCTT+TGG | 0.463377 | 4.2:-38762906 | None:intergenic |
| TGAGTTTACCATACCAATAG+AGG | 0.473658 | 4.2:-38767138 | None:intergenic |
| TGGTTCTACGCTACCTCCTA+AGG | 0.476967 | 4.2:+38764551 | MS.gene46509:CDS |
| TCCGACTCCGACCCCAAATC+CGG | 0.477207 | 4.2:+38762833 | MS.gene46509:CDS |
| CATCTGCAATCGGCTCGGTT+GGG | 0.481915 | 4.2:+38765962 | MS.gene46509:CDS |
| CGCTGGGAAGAGACGCTTGA+GGG | 0.484720 | 4.2:+38764468 | MS.gene46509:CDS |
| GTGGCTTCCAAGGGAAGAAT+GGG | 0.487229 | 4.2:+38767104 | MS.gene46509:CDS |
| GTCGGAGTCGGAGAGTTTGA+TGG | 0.489580 | 4.2:-38762822 | None:intergenic |
| AGTTAAATCACCTGCACGCT+GGG | 0.490042 | 4.2:+38764452 | MS.gene46509:intron |
| GCGGCTTCCTTGAACGCGGA+TGG | 0.496718 | 4.2:-38767409 | None:intergenic |
| GACGTAGACATGAACTGGTT+GGG | 0.499633 | 4.2:-38762867 | None:intergenic |
| AGCGTCTCTTCCCAGCGTGC+AGG | 0.503259 | 4.2:-38764462 | None:intergenic |
| ACCAAGGATCATATCAATCA+TGG | 0.504759 | 4.2:+38764978 | MS.gene46509:CDS |
| ACCAAGGAGACGACGAGGGA+AGG | 0.507812 | 4.2:-38762736 | None:intergenic |
| GGAAAGAAGATTTGCTGTCC+TGG | 0.508321 | 4.2:+38764932 | MS.gene46509:intron |
| GGACGTAGACATGAACTGGT+TGG | 0.514912 | 4.2:-38762868 | None:intergenic |
| CAAGAGTGTCACTGCAATTG+TGG | 0.515306 | 4.2:+38767085 | MS.gene46509:CDS |
| GCCGGATTTGGGGTCGGAGT+CGG | 0.519560 | 4.2:-38762834 | None:intergenic |
| GAAGCCACTTCACTTTCAGT+TGG | 0.521194 | 4.2:-38763492 | None:intergenic |
| CACCGCATCTGCAATCGGCT+CGG | 0.525408 | 4.2:+38765957 | MS.gene46509:CDS |
| GTCGGAGAGTTTGATGGAAG+CGG | 0.534044 | 4.2:-38762816 | None:intergenic |
| ATGTCCACCGCATCTGCAAT+CGG | 0.535195 | 4.2:+38765952 | MS.gene46509:CDS |
| AACCGAGCCGATTGCAGATG+CGG | 0.540125 | 4.2:-38765959 | None:intergenic |
| TAGTTAAATCACCTGCACGC+TGG | 0.549770 | 4.2:+38764451 | MS.gene46509:intron |
| TCCAGGCATAGGTCCTAAGA+TGG | 0.552749 | 4.2:+38765787 | MS.gene46509:CDS |
| GCCATCTTAGGACCTATGCC+TGG | 0.556487 | 4.2:-38765788 | None:intergenic |
| TCACATCCCATAGTGTCCAC+TGG | 0.558188 | 4.2:-38764522 | None:intergenic |
| AAGCTGAAGCGCCGGATTTG+GGG | 0.575203 | 4.2:-38762844 | None:intergenic |
| TCCGCGTTCAAGGAAGCCGC+AGG | 0.576159 | 4.2:+38767412 | MS.gene46509:CDS |
| AATAGGTTATGAATGTTGCA+TGG | 0.580611 | 4.2:+38765898 | MS.gene46509:intron |
| CCAAATCCACCAAGTCTGGA+AGG | 0.584547 | 4.2:+38767449 | MS.gene46509:CDS |
| TTGAGGGTATTCGCAAAATG+AGG | 0.585116 | 4.2:+38764484 | MS.gene46509:CDS |
| TTGATAAAAGAGAAGATACC+AGG | 0.586566 | 4.2:-38764950 | None:intergenic |
| GGGAACTGGGCTTGTACCTG+CGG | 0.587952 | 4.2:-38767428 | None:intergenic |
| ACTGCAATTGTGGCTTCCAA+GGG | 0.592814 | 4.2:+38767095 | MS.gene46509:CDS |
| GAGTATCTACACATATCCCT+TGG | 0.595774 | 4.2:-38765929 | None:intergenic |
| GTTGCATGGAACAATGTCCA+AGG | 0.599309 | 4.2:+38765912 | MS.gene46509:CDS |
| CTACTACAACTTCCAGGCAT+AGG | 0.599409 | 4.2:+38765776 | MS.gene46509:CDS |
| GTGGCTTCTACCACACATAG+TGG | 0.602671 | 4.2:+38763507 | MS.gene46509:CDS |
| GATTCCAACTGAAAGTGAAG+TGG | 0.605901 | 4.2:+38763488 | MS.gene46509:CDS |
| ATACAGGGTCAAACCTTAGG+AGG | 0.609377 | 4.2:-38764564 | None:intergenic |
| AACAAACCAAGGAGACGACG+AGG | 0.611827 | 4.2:-38762741 | None:intergenic |
| TGGTTGGGAAGCTGAAGCGC+CGG | 0.612062 | 4.2:-38762852 | None:intergenic |
| CGAGCCGATTGCAGATGCGG+TGG | 0.617927 | 4.2:-38765956 | None:intergenic |
| ATTTGTCTCATGAAGTATGG+TGG | 0.625018 | 4.2:+38765728 | MS.gene46509:CDS |
| TGAAGCGCCGGATTTGGGGT+CGG | 0.626915 | 4.2:-38762840 | None:intergenic |
| TGATGCAATTAACAATGCTG+AGG | 0.635618 | 4.2:+38765427 | MS.gene46509:CDS |
| ACTATGGGATGTGAGAAAGC+TGG | 0.636572 | 4.2:+38764531 | MS.gene46509:CDS |
| CAACTTCCCAAAACAAACCA+AGG | 0.641374 | 4.2:-38762752 | None:intergenic |
| GATGCACCAGTGGACACTAT+GGG | 0.645959 | 4.2:+38764516 | MS.gene46509:CDS |
| ACCTGCGGCTTCCTTGAACG+CGG | 0.653221 | 4.2:-38767413 | None:intergenic |
| TTACTACTTACCACTATGTG+TGG | 0.653730 | 4.2:-38763517 | None:intergenic |
| ACAAACCAAGGAGACGACGA+GGG | 0.655970 | 4.2:-38762740 | None:intergenic |
| TTGCATGGAACAATGTCCAA+GGG | 0.659236 | 4.2:+38765913 | MS.gene46509:CDS |
| GTGTTCTGGAGATGCACCAG+TGG | 0.660918 | 4.2:+38764506 | MS.gene46509:CDS |
| ACGCTGGGAAGAGACGCTTG+AGG | 0.696005 | 4.2:+38764467 | MS.gene46509:CDS |
| ACACCTCTAAGACCTCGCTG+TGG | 0.758067 | 4.2:+38767361 | MS.gene46509:CDS |
| ATACTACATTCTCCACAGCG+AGG | 0.775449 | 4.2:-38767373 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTTCAAATTTAATAAAT+CGG | + | chr4.2:38766611-38766630 | MS.gene46509:intron | 10.0% |
| !! | TTTATTATAAAAACACAAAT+GGG | - | chr4.2:38763111-38763130 | None:intergenic | 10.0% |
| !! | CTTTATTATAAAAACACAAA+TGG | - | chr4.2:38763112-38763131 | None:intergenic | 15.0% |
| !! | TATATACTAAAAACTTTAGA+AGG | - | chr4.2:38765016-38765035 | None:intergenic | 15.0% |
| !! | TGGATAATAATTTAAGAAAA+TGG | - | chr4.2:38766919-38766938 | None:intergenic | 15.0% |
| !!! | AAATGTGTTTTTATGAATAT+AGG | + | chr4.2:38765365-38765384 | MS.gene46509:intron | 15.0% |
| !!! | AAATTAGTCTTATGTTAATA+TGG | - | chr4.2:38764346-38764365 | None:intergenic | 15.0% |
| !!! | AACATAATCAAATTCTAAAA+AGG | + | chr4.2:38764120-38764139 | MS.gene46509:intron | 15.0% |
| !!! | AATGTGTTTTTATGAATATA+GGG | + | chr4.2:38765366-38765385 | MS.gene46509:intron | 15.0% |
| !!! | AATTAAAAGAAGTATAATAC+AGG | - | chr4.2:38764583-38764602 | None:intergenic | 15.0% |
| !!! | ACATAATCAAATTCTAAAAA+GGG | + | chr4.2:38764121-38764140 | MS.gene46509:intron | 15.0% |
| !!! | ATAATACTTGTTAAATTTTC+TGG | + | chr4.2:38765033-38765052 | MS.gene46509:intron | 15.0% |
| !!! | ATTAAAAGAAGTATAATACA+GGG | - | chr4.2:38764582-38764601 | None:intergenic | 15.0% |
| !!! | TAATACTTTTAAAAGAAACA+GGG | - | chr4.2:38765489-38765508 | None:intergenic | 15.0% |
| !!! | TTAATTTGATATTTCAGTTT+GGG | + | chr4.2:38764597-38764616 | MS.gene46509:intron | 15.0% |
| !!! | TTCTTTTAAAAGTATTACAT+TGG | + | chr4.2:38765492-38765511 | MS.gene46509:intron | 15.0% |
| !!! | TTTAATTTGATATTTCAGTT+TGG | + | chr4.2:38764596-38764615 | MS.gene46509:intron | 15.0% |
| !! | AATTGTTAATCAAGAAACTT+GGG | + | chr4.2:38764004-38764023 | MS.gene46509:intron | 20.0% |
| !! | ATATAAAGGATCAAATGAAT+TGG | + | chr4.2:38763257-38763276 | MS.gene46509:CDS | 20.0% |
| !! | CAGATAGTTAAAACTTAAAA+GGG | + | chr4.2:38765127-38765146 | MS.gene46509:intron | 20.0% |
| !! | GTACTAAAATATATACACAA+AGG | - | chr4.2:38764198-38764217 | None:intergenic | 20.0% |
| !! | TAATCTTGTATTGAATTGAT+TGG | + | chr4.2:38764818-38764837 | MS.gene46509:intron | 20.0% |
| !! | TAATTGTTAATCAAGAAACT+TGG | + | chr4.2:38764003-38764022 | MS.gene46509:intron | 20.0% |
| !! | TAATTTGATATTTCAGTTTG+GGG | + | chr4.2:38764598-38764617 | MS.gene46509:intron | 20.0% |
| !! | TAGTTAACTTATTTAACGAA+CGG | + | chr4.2:38765249-38765268 | MS.gene46509:intron | 20.0% |
| !!! | AACACAAGAAATTTTCAATT+TGG | + | chr4.2:38767247-38767266 | MS.gene46509:intron | 20.0% |
| !!! | ATGTGTTTTTATGAATATAG+GGG | + | chr4.2:38765367-38765386 | MS.gene46509:intron | 20.0% |
| !!! | ATTGCTTCTTTGTTTTTAAT+GGG | + | chr4.2:38762995-38763014 | MS.gene46509:intron | 20.0% |
| !!! | ATTTAGGAAGTTTAAAATCA+TGG | + | chr4.2:38763073-38763092 | MS.gene46509:intron | 20.0% |
| !!! | GTAATACTTTTAAAAGAAAC+AGG | - | chr4.2:38765490-38765509 | None:intergenic | 20.0% |
| !!! | TTATTGTGTCAATTCTTTTA+AGG | + | chr4.2:38765589-38765608 | MS.gene46509:intron | 20.0% |
| !!! | TTATTTGTTGATTTATGTCT+TGG | + | chr4.2:38764634-38764653 | MS.gene46509:intron | 20.0% |
| !!! | TTTTCTCAATCTTTCTATTT+AGG | + | chr4.2:38763057-38763076 | MS.gene46509:intron | 20.0% |
| ! | AAAATTGCACAGGTTAAATT+TGG | - | chr4.2:38767168-38767187 | None:intergenic | 25.0% |
| ! | AAGTAGTAAATAGTTGCAAA+AGG | + | chr4.2:38763531-38763550 | MS.gene46509:intron | 25.0% |
| ! | AATAATTAATGTAGCAAAGC+AGG | + | chr4.2:38764028-38764047 | MS.gene46509:intron | 25.0% |
| ! | AATATTTGTCTCATGAAGTA+TGG | + | chr4.2:38765725-38765744 | MS.gene46509:CDS | 25.0% |
| ! | AGTAGTAAATAGTTGCAAAA+GGG | + | chr4.2:38763532-38763551 | MS.gene46509:intron | 25.0% |
| ! | ATATAAGAGTAAAATTGCAC+AGG | - | chr4.2:38767178-38767197 | None:intergenic | 25.0% |
| ! | ATATATACACAAAGGAAAGA+TGG | - | chr4.2:38764190-38764209 | None:intergenic | 25.0% |
| ! | ATGAAAAACACCTAAAACAA+TGG | - | chr4.2:38763943-38763962 | None:intergenic | 25.0% |
| ! | ATTGAAGACTTTGCATATAA+AGG | + | chr4.2:38763243-38763262 | MS.gene46509:CDS | 25.0% |
| ! | CACATACTTCAAAAGTAAAA+TGG | - | chr4.2:38765282-38765301 | None:intergenic | 25.0% |
| ! | CCAGATAGTTAAAACTTAAA+AGG | + | chr4.2:38765126-38765145 | MS.gene46509:intron | 25.0% |
| ! | GCATTATATAATACCAAAAG+AGG | - | chr4.2:38763978-38763997 | None:intergenic | 25.0% |
| ! | GCTAAACTACAATCTTAATA+TGG | - | chr4.2:38766301-38766320 | None:intergenic | 25.0% |
| ! | TAAAATGTAACCAAATGTGT+AGG | - | chr4.2:38766890-38766909 | None:intergenic | 25.0% |
| ! | TATATCTGTTGAATATCAAC+AGG | + | chr4.2:38767315-38767334 | MS.gene46509:intron | 25.0% |
| ! | TCAAAGAAGAAAAAGAATAC+TGG | + | chr4.2:38765155-38765174 | MS.gene46509:intron | 25.0% |
| ! | TTTCCTCTATTAATCTTGAT+CGG | + | chr4.2:38766581-38766600 | MS.gene46509:intron | 25.0% |
| !! | ATACTTTTATAAGATCGACA+AGG | - | chr4.2:38763430-38763449 | None:intergenic | 25.0% |
| !! | GATAACAGAAAATAATTTGC+AGG | - | chr4.2:38766146-38766165 | None:intergenic | 25.0% |
| !! | TACTTTTATAAGATCGACAA+GGG | - | chr4.2:38763429-38763448 | None:intergenic | 25.0% |
| !! | TTGATTTTGTTGAAGTTTTG+TGG | - | chr4.2:38762930-38762949 | None:intergenic | 25.0% |
| !! | TTTGAGTGATTTTCAAACAT+TGG | - | chr4.2:38763606-38763625 | None:intergenic | 25.0% |
| !!! | AAATGTATCCATTTTGTTTG+TGG | + | chr4.2:38766169-38766188 | MS.gene46509:intron | 25.0% |
| !!! | ATAACATGGGAATTTTGATA+AGG | - | chr4.2:38764910-38764929 | None:intergenic | 25.0% |
| !!! | CATTGCTTCTTTGTTTTTAA+TGG | + | chr4.2:38762994-38763013 | MS.gene46509:intron | 25.0% |
| !!! | CATTTTTTTTTGGGTTGATT+TGG | + | chr4.2:38766207-38766226 | MS.gene46509:intron | 25.0% |
| !!! | CCTTTTAAGTTTTAACTATC+TGG | - | chr4.2:38765129-38765148 | None:intergenic | 25.0% |
| !!! | TATGTGTTTTTGTAGAAGTT+TGG | + | chr4.2:38763210-38763229 | MS.gene46509:intron | 25.0% |
| !!! | TCATCATGGCATTTTTTTTT+GGG | + | chr4.2:38766198-38766217 | MS.gene46509:intron | 25.0% |
| !!! | TGCAATTTTTTTCAAGTTAG+TGG | - | chr4.2:38765705-38765724 | None:intergenic | 25.0% |
| !!! | TGTTTTAGTGCTTTATAACT+TGG | + | chr4.2:38766968-38766987 | MS.gene46509:intron | 25.0% |
| !!! | TTACATTGGTTCAAATGATT+TGG | + | chr4.2:38765506-38765525 | MS.gene46509:intron | 25.0% |
| !!! | TTCATCATGGCATTTTTTTT+TGG | + | chr4.2:38766197-38766216 | MS.gene46509:intron | 25.0% |
| !!! | TTTTAGGTAATTTCTAGAGT+GGG | + | chr4.2:38763560-38763579 | MS.gene46509:intron | 25.0% |
| !!! | TTTTTGTTTCTTCTTTTTCC+AGG | + | chr4.2:38765658-38765677 | MS.gene46509:intron | 25.0% |
| AAAAACACCTAAAACAATGG+TGG | - | chr4.2:38763940-38763959 | None:intergenic | 30.0% | |
| AAGAGACTTATGAAGATTCA+AGG | + | chr4.2:38765548-38765567 | MS.gene46509:intron | 30.0% | |
| AATAGGTTATGAATGTTGCA+TGG | + | chr4.2:38765898-38765917 | MS.gene46509:intron | 30.0% | |
| AATCTTCTTTCCTGATAACA+TGG | - | chr4.2:38764924-38764943 | None:intergenic | 30.0% | |
| AATTCTATCAGTCAAACAGT+AGG | - | chr4.2:38764374-38764393 | None:intergenic | 30.0% | |
| ACATTCTTGAGAAAATGTCA+TGG | - | chr4.2:38764246-38764265 | None:intergenic | 30.0% | |
| ACGTGATAAAGTGATAAGAT+CGG | + | chr4.2:38763677-38763696 | MS.gene46509:intron | 30.0% | |
| ATACCATGAGCTTCTATTTA+CGG | + | chr4.2:38763827-38763846 | MS.gene46509:intron | 30.0% | |
| ATCAAAATTCCCATGTTATC+AGG | + | chr4.2:38764911-38764930 | MS.gene46509:intron | 30.0% | |
| ATCTTCTTTCCTGATAACAT+GGG | - | chr4.2:38764923-38764942 | None:intergenic | 30.0% | |
| ATTAATAGAGGAAAGAAGCT+AGG | - | chr4.2:38766575-38766594 | None:intergenic | 30.0% | |
| ATTCTATCAGTCAAACAGTA+GGG | - | chr4.2:38764373-38764392 | None:intergenic | 30.0% | |
| ATTTCAGATTCCTTGAAGTT+GGG | - | chr4.2:38766692-38766711 | None:intergenic | 30.0% | |
| CAATTAATCCTCTATTGGTA+TGG | + | chr4.2:38767130-38767149 | MS.gene46509:intron | 30.0% | |
| CATACCAATAGAGGATTAAT+TGG | - | chr4.2:38767132-38767151 | None:intergenic | 30.0% | |
| GCTATGGGAACAAATAAATT+AGG | - | chr4.2:38766060-38766079 | None:intergenic | 30.0% | |
| GTTCTTTCCTCTATTAAAGA+TGG | - | chr4.2:38766266-38766285 | None:intergenic | 30.0% | |
| TACTTCAAAAGTAAAATGGC+AGG | - | chr4.2:38765278-38765297 | None:intergenic | 30.0% | |
| TAGAAGCTCATGGTATAATT+CGG | - | chr4.2:38763823-38763842 | None:intergenic | 30.0% | |
| TATGCAAAGTCTTCAATTTC+AGG | - | chr4.2:38763240-38763259 | None:intergenic | 30.0% | |
| TATTTCAGATTCCTTGAAGT+TGG | - | chr4.2:38766693-38766712 | None:intergenic | 30.0% | |
| TGAGATTACATCTTACAAAG+TGG | + | chr4.2:38766388-38766407 | MS.gene46509:intron | 30.0% | |
| TTACAATCTCTCTTTGTAAG+TGG | + | chr4.2:38766783-38766802 | MS.gene46509:intron | 30.0% | |
| TTGATAAAAGAGAAGATACC+AGG | - | chr4.2:38764953-38764972 | None:intergenic | 30.0% | |
| TTTAACTATCTGGTGTGAAT+CGG | - | chr4.2:38765119-38765138 | None:intergenic | 30.0% | |
| TTTCAGTTCAGCAAAAAACA+AGG | - | chr4.2:38763761-38763780 | None:intergenic | 30.0% | |
| ! | ACTTTTATAAGATCGACAAG+GGG | - | chr4.2:38763428-38763447 | None:intergenic | 30.0% |
| ! | CATTTCTGATTTTACTGCAA+CGG | - | chr4.2:38763457-38763476 | None:intergenic | 30.0% |
| ! | TAAAACAATGGTGGCTTTTA+GGG | - | chr4.2:38763931-38763950 | None:intergenic | 30.0% |
| ! | TAAATGCTTATCTCCTCTTT+TGG | + | chr4.2:38763962-38763981 | MS.gene46509:intron | 30.0% |
| ! | TGGGTAAATCAACTTTTTGA+TGG | - | chr4.2:38765459-38765478 | None:intergenic | 30.0% |
| ! | TTCAATATATTTGCTGCTGT+CGG | + | chr4.2:38766112-38766131 | MS.gene46509:intron | 30.0% |
| ! | TTGCAAAAGGGAATTGTTTT+AGG | + | chr4.2:38763544-38763563 | MS.gene46509:intron | 30.0% |
| !! | AAGGTTATGTTTGTTTTTCG+CGG | + | chr4.2:38765608-38765627 | MS.gene46509:intron | 30.0% |
| !! | ACTCTTCATTTTAACAATGC+TGG | + | chr4.2:38764056-38764075 | MS.gene46509:intron | 30.0% |
| !! | GTTTTAGGTAATTTCTAGAG+TGG | + | chr4.2:38763559-38763578 | MS.gene46509:intron | 30.0% |
| !!! | AAACAGGTTCCTTTTAAGTT+TGG | + | chr4.2:38766002-38766021 | MS.gene46509:intron | 30.0% |
| !!! | CTCAACGTATGATTTTTAGT+TGG | + | chr4.2:38764845-38764864 | MS.gene46509:intron | 30.0% |
| !!! | CTTTGGCTTTTTTGTTTCTT+CGG | - | chr4.2:38762892-38762911 | None:intergenic | 30.0% |
| AAAAGAAACAGGGAACATAC+TGG | - | chr4.2:38765479-38765498 | None:intergenic | 35.0% | |
| AAAGAAACAGGGAACATACT+GGG | - | chr4.2:38765478-38765497 | None:intergenic | 35.0% | |
| ACCAAGGATCATATCAATCA+TGG | + | chr4.2:38764978-38764997 | MS.gene46509:CDS | 35.0% | |
| ACCATGATTGATATGATCCT+TGG | - | chr4.2:38764982-38765001 | None:intergenic | 35.0% | |
| ACTTTATGAGTCTGTGTTGA+AGG | - | chr4.2:38762959-38762978 | None:intergenic | 35.0% | |
| AGTTACGTGATGTTAAGCTA+TGG | + | chr4.2:38766530-38766549 | MS.gene46509:intron | 35.0% | |
| ATAATACAGGGTCAAACCTT+AGG | - | chr4.2:38764570-38764589 | None:intergenic | 35.0% | |
| ATTACCCTAAGCAAAAGTTC+AGG | + | chr4.2:38763637-38763656 | MS.gene46509:intron | 35.0% | |
| ATTTGTCTCATGAAGTATGG+TGG | + | chr4.2:38765728-38765747 | MS.gene46509:CDS | 35.0% | |
| CACCTATAAGTCTATAGCAA+TGG | + | chr4.2:38764295-38764314 | MS.gene46509:intron | 35.0% | |
| CATCCGATCAAGATTAATAG+AGG | - | chr4.2:38766587-38766606 | None:intergenic | 35.0% | |
| CCAACTCTTGAAATGAGTAA+TGG | - | chr4.2:38764764-38764783 | None:intergenic | 35.0% | |
| CCATTACTCATTTCAAGAGT+TGG | + | chr4.2:38764761-38764780 | MS.gene46509:intron | 35.0% | |
| CGAAGAAACAAAAAAGCCAA+AGG | + | chr4.2:38762890-38762909 | MS.gene46509:CDS | 35.0% | |
| CGTTCAACTCTAACAAAGAT+CGG | - | chr4.2:38763862-38763881 | None:intergenic | 35.0% | |
| CTCCATTGCTATAGACTTAT+AGG | - | chr4.2:38764300-38764319 | None:intergenic | 35.0% | |
| CTTTAATAGAGGAAAGAACC+AGG | + | chr4.2:38766267-38766286 | MS.gene46509:intron | 35.0% | |
| GAAATGAGTAATGGCTATAC+TGG | - | chr4.2:38764755-38764774 | None:intergenic | 35.0% | |
| GAAGTCTACCACAAACAAAA+TGG | - | chr4.2:38766180-38766199 | None:intergenic | 35.0% | |
| GATTACACGAATAGTTGACA+AGG | - | chr4.2:38764803-38764822 | None:intergenic | 35.0% | |
| GATTGATATGATCCTTGGTT+TGG | - | chr4.2:38764977-38764996 | None:intergenic | 35.0% | |
| GGATCCAATTAATCCTCTAT+TGG | + | chr4.2:38767125-38767144 | MS.gene46509:CDS | 35.0% | |
| TACCATGAGCTTCTATTTAC+GGG | + | chr4.2:38763828-38763847 | MS.gene46509:intron | 35.0% | |
| TATTTGTTCCCATAGCATCT+TGG | + | chr4.2:38766064-38766083 | MS.gene46509:intron | 35.0% | |
| TCAGCATTGTTAATTGCATC+AGG | - | chr4.2:38765428-38765447 | None:intergenic | 35.0% | |
| TCTGTTGAATATCAACAGGT+TGG | + | chr4.2:38767319-38767338 | MS.gene46509:intron | 35.0% | |
| TGAGTTTACCATACCAATAG+AGG | - | chr4.2:38767141-38767160 | None:intergenic | 35.0% | |
| TGATGCAATTAACAATGCTG+AGG | + | chr4.2:38765427-38765446 | MS.gene46509:CDS | 35.0% | |
| TTACCCTAAGCAAAAGTTCA+GGG | + | chr4.2:38763638-38763657 | MS.gene46509:intron | 35.0% | |
| TTACTACTTACCACTATGTG+TGG | - | chr4.2:38763520-38763539 | None:intergenic | 35.0% | |
| TTGCTGAACTGAAACTGATT+AGG | + | chr4.2:38763767-38763786 | MS.gene46509:intron | 35.0% | |
| TTTAATTATCCGTCCACTGT+AGG | + | chr4.2:38763885-38763904 | MS.gene46509:intron | 35.0% | |
| TTTCTTGTGTTGAGTCTCAT+CGG | - | chr4.2:38767238-38767257 | None:intergenic | 35.0% | |
| ! | AGTAGTTGCTCAATTTTGCT+AGG | - | chr4.2:38765761-38765780 | None:intergenic | 35.0% |
| ! | ATGCTGGCTGTTTAATCATT+TGG | + | chr4.2:38764072-38764091 | MS.gene46509:intron | 35.0% |
| ! | CTAAAACAATGGTGGCTTTT+AGG | - | chr4.2:38763932-38763951 | None:intergenic | 35.0% |
| ! | CTAAAAGCCACCATTGTTTT+AGG | + | chr4.2:38763930-38763949 | MS.gene46509:intron | 35.0% |
| ! | CTTCAGATTAAAGGTGTGTT+TGG | + | chr4.2:38766820-38766839 | MS.gene46509:intron | 35.0% |
| ! | GAATATCAACAGGTTGGATT+TGG | + | chr4.2:38767325-38767344 | MS.gene46509:intron | 35.0% |
| ! | GATGTAGTTTTTCTGTCACT+TGG | + | chr4.2:38766990-38767009 | MS.gene46509:intron | 35.0% |
| ! | GATTTTGTTAGTGGCACAAT+AGG | + | chr4.2:38765881-38765900 | MS.gene46509:intron | 35.0% |
| ! | GTTTCTTCTTTTTCCAGGTT+GGG | + | chr4.2:38765663-38765682 | MS.gene46509:intron | 35.0% |
| ! | TCTTTTATCAAGCCAAACCA+AGG | + | chr4.2:38764962-38764981 | MS.gene46509:CDS | 35.0% |
| ! | TGTTTCTTCTTTTTCCAGGT+TGG | + | chr4.2:38765662-38765681 | MS.gene46509:intron | 35.0% |
| ! | TTATAGATGCATTTTGCGAC+TGG | + | chr4.2:38766421-38766440 | MS.gene46509:intron | 35.0% |
| !! | ATTTCTAGAGTGGGTAAATG+TGG | + | chr4.2:38763569-38763588 | MS.gene46509:intron | 35.0% |
| !! | TCTGAAGCTGATTTTGTTAG+TGG | + | chr4.2:38765872-38765891 | MS.gene46509:intron | 35.0% |
| !! | TTGTTGAAGTTTTGTGGTAG+TGG | - | chr4.2:38762924-38762943 | None:intergenic | 35.0% |
| !!! | TAAGCAGATCGTTTTGAAGA+AGG | - | chr4.2:38765403-38765422 | None:intergenic | 35.0% |
| AAATGTGTAGGTGTAGGTGT+AGG | - | chr4.2:38766878-38766897 | None:intergenic | 40.0% | |
| AACTGATTAGGTCACTGTCT+AGG | + | chr4.2:38763779-38763798 | MS.gene46509:intron | 40.0% | |
| AATCCTACAGTCAGTGTGTT+TGG | - | chr4.2:38763386-38763405 | None:intergenic | 40.0% | |
| ACACAATAACATGCAAGCTG+AGG | - | chr4.2:38765578-38765597 | None:intergenic | 40.0% | |
| ACACCTTAAGTCTACTAGTC+TGG | + | chr4.2:38764397-38764416 | MS.gene46509:intron | 40.0% | |
| ACACGAATAGTTGACAAGGT+TGG | - | chr4.2:38764799-38764818 | None:intergenic | 40.0% | |
| ACCATGAGCTTCTATTTACG+GGG | + | chr4.2:38763829-38763848 | MS.gene46509:intron | 40.0% | |
| AGACTAGTAGACTTAAGGTG+TGG | - | chr4.2:38764398-38764417 | None:intergenic | 40.0% | |
| AGTTGTGCCAGTAACTGATT+CGG | + | chr4.2:38766498-38766517 | MS.gene46509:intron | 40.0% | |
| ATCCCAGACTAGTAGACTTA+AGG | - | chr4.2:38764403-38764422 | None:intergenic | 40.0% | |
| CAACTTCCCAAAACAAACCA+AGG | - | chr4.2:38762755-38762774 | None:intergenic | 40.0% | |
| CATACCAAATGAGCCATCTT+AGG | - | chr4.2:38765803-38765822 | None:intergenic | 40.0% | |
| CCATACAATTCAAGTCGAGT+TGG | - | chr4.2:38765839-38765858 | None:intergenic | 40.0% | |
| CTATTAAAGATGGACAACCC+AGG | - | chr4.2:38766256-38766275 | None:intergenic | 40.0% | |
| CTTAATATGGTATCAGAGCC+TGG | - | chr4.2:38766288-38766307 | None:intergenic | 40.0% | |
| CTTACAGTGACACGTAAACA+TGG | - | chr4.2:38766939-38766958 | None:intergenic | 40.0% | |
| GAGTATCTACACATATCCCT+TGG | - | chr4.2:38765932-38765951 | None:intergenic | 40.0% | |
| GAGTGGGTAAATGTGGTTTA+CGG | + | chr4.2:38763576-38763595 | MS.gene46509:intron | 40.0% | |
| GATTCCAACTGAAAGTGAAG+TGG | + | chr4.2:38763488-38763507 | MS.gene46509:CDS | 40.0% | |
| GGGTTGTCCATCTTTAATAG+AGG | + | chr4.2:38766256-38766275 | MS.gene46509:intron | 40.0% | |
| GTAACCAAATGTGTAGGTGT+AGG | - | chr4.2:38766884-38766903 | None:intergenic | 40.0% | |
| GTGATGCCACCAAACTTAAA+AGG | - | chr4.2:38766014-38766033 | None:intergenic | 40.0% | |
| GTTTGTGGTAGACTTCATCA+TGG | + | chr4.2:38766184-38766203 | MS.gene46509:intron | 40.0% | |
| TAAAGTGATAAGATCGGCGT+TGG | + | chr4.2:38763683-38763702 | MS.gene46509:intron | 40.0% | |
| TACACCTACACCTACACATT+TGG | + | chr4.2:38766877-38766896 | MS.gene46509:intron | 40.0% | |
| TGTAGGATTCCTTGACTGTA+GGG | + | chr4.2:38763397-38763416 | MS.gene46509:intron | 40.0% | |
| TGTTAATGCATTCACGCAGT+CGG | + | chr4.2:38763323-38763342 | MS.gene46509:intron | 40.0% | |
| TTCTCAACCGAATCAGTTAC+TGG | - | chr4.2:38766508-38766527 | None:intergenic | 40.0% | |
| TTCTCGTATAAAACCCAACC+TGG | - | chr4.2:38765679-38765698 | None:intergenic | 40.0% | |
| TTGCATGGAACAATGTCCAA+GGG | + | chr4.2:38765913-38765932 | MS.gene46509:CDS | 40.0% | |
| TTTGTAAGTGGCTTGAACAC+CGG | + | chr4.2:38766795-38766814 | MS.gene46509:intron | 40.0% | |
| ! | ACACCTTTAATCTGAAGTGC+CGG | - | chr4.2:38766817-38766836 | None:intergenic | 40.0% |
| ! | ATTCGCAAAATGAGGTGTTC+TGG | + | chr4.2:38764492-38764511 | MS.gene46509:CDS | 40.0% |
| ! | CACCTTAAGTCTACTAGTCT+GGG | + | chr4.2:38764398-38764417 | MS.gene46509:intron | 40.0% |
| ! | CCAACTCGACTTGAATTGTA+TGG | + | chr4.2:38765836-38765855 | MS.gene46509:intron | 40.0% |
| !! | TTGAGGGTATTCGCAAAATG+AGG | + | chr4.2:38764484-38764503 | MS.gene46509:CDS | 40.0% |
| !! | TTTCTGGCTTCTGTACATAG+CGG | + | chr4.2:38765049-38765068 | MS.gene46509:intron | 40.0% |
| !!! | CAGGTTCCTTTTAAGTTTGG+TGG | + | chr4.2:38766005-38766024 | MS.gene46509:intron | 40.0% |
| !!! | CTTGGTTTGTTTTGGGAAGT+TGG | + | chr4.2:38762753-38762772 | MS.gene46509:CDS | 40.0% |
| !!! | TCGTCTCCTTGGTTTGTTTT+GGG | + | chr4.2:38762746-38762765 | MS.gene46509:CDS | 40.0% |
| !!! | TTGAAGTTTTGTGGTAGTGG+TGG | - | chr4.2:38762921-38762940 | None:intergenic | 40.0% |
| ACACCGGCACTTCAGATTAA+AGG | + | chr4.2:38766811-38766830 | MS.gene46509:intron | 45.0% | |
| ACTATGGGATGTGAGAAAGC+TGG | + | chr4.2:38764531-38764550 | MS.gene46509:CDS | 45.0% | |
| ACTGCAATTGTGGCTTCCAA+GGG | + | chr4.2:38767095-38767114 | MS.gene46509:CDS | 45.0% | |
| AGGTCCTAAGATGGCTCATT+TGG | + | chr4.2:38765796-38765815 | MS.gene46509:CDS | 45.0% | |
| AGGTTGCTTCTCTAATCGCA+AGG | - | chr4.2:38766236-38766255 | None:intergenic | 45.0% | |
| AGTACAGCATGCTTGTGTGT+TGG | + | chr4.2:38764213-38764232 | MS.gene46509:intron | 45.0% | |
| AGTGACACTCTTGTCTCTTC+AGG | - | chr4.2:38767078-38767097 | None:intergenic | 45.0% | |
| AGTTAAATCACCTGCACGCT+GGG | + | chr4.2:38764452-38764471 | MS.gene46509:intron | 45.0% | |
| ATACAGGGTCAAACCTTAGG+AGG | - | chr4.2:38764567-38764586 | None:intergenic | 45.0% | |
| ATACTACATTCTCCACAGCG+AGG | - | chr4.2:38767376-38767395 | None:intergenic | 45.0% | |
| ATTGGATCCCATTCTTCCCT+TGG | - | chr4.2:38767114-38767133 | None:intergenic | 45.0% | |
| CTACTACAACTTCCAGGCAT+AGG | + | chr4.2:38765776-38765795 | MS.gene46509:CDS | 45.0% | |
| CTGTAGGATTCCTTGACTGT+AGG | + | chr4.2:38763396-38763415 | MS.gene46509:intron | 45.0% | |
| CTTCTTGTTCCTTCCAGACT+TGG | - | chr4.2:38767461-38767480 | None:intergenic | 45.0% | |
| GAAGCCACTTCACTTTCAGT+TGG | - | chr4.2:38763495-38763514 | None:intergenic | 45.0% | |
| GACGTAGACATGAACTGGTT+GGG | - | chr4.2:38762870-38762889 | None:intergenic | 45.0% | |
| GAGCAACTACTACAACTTCC+AGG | + | chr4.2:38765770-38765789 | MS.gene46509:CDS | 45.0% | |
| GTCGTCTGATCTTGATCAGT+CGG | + | chr4.2:38763356-38763375 | MS.gene46509:intron | 45.0% | |
| GTGTTTCATATGGCCTACAG+TGG | - | chr4.2:38763901-38763920 | None:intergenic | 45.0% | |
| GTTGCATGGAACAATGTCCA+AGG | + | chr4.2:38765912-38765931 | MS.gene46509:CDS | 45.0% | |
| TAGTTAAATCACCTGCACGC+TGG | + | chr4.2:38764451-38764470 | MS.gene46509:intron | 45.0% | |
| TATCACGTGTAAGAACGTCG+AGG | - | chr4.2:38763665-38763684 | None:intergenic | 45.0% | |
| TCCCCGTAAATAGAAGCTCA+TGG | - | chr4.2:38763833-38763852 | None:intergenic | 45.0% | |
| TGCGATTAGAGAAGCAACCT+GGG | + | chr4.2:38766236-38766255 | MS.gene46509:intron | 45.0% | |
| TGGGTAAATGTGGTTTACGG+TGG | + | chr4.2:38763579-38763598 | MS.gene46509:intron | 45.0% | |
| TTCATATGGCCTACAGTGGA+CGG | - | chr4.2:38763897-38763916 | None:intergenic | 45.0% | |
| TTCGTGATCTCCCAACTTCA+AGG | + | chr4.2:38766679-38766698 | MS.gene46509:intron | 45.0% | |
| TTGCGATTAGAGAAGCAACC+TGG | + | chr4.2:38766235-38766254 | MS.gene46509:intron | 45.0% | |
| ! | AGGACCCTGAACTTTTGCTT+AGG | - | chr4.2:38763645-38763664 | None:intergenic | 45.0% |
| ! | GAAGCTAGGCTAGCTAACTA+TGG | - | chr4.2:38766561-38766580 | None:intergenic | 45.0% |
| ! | GGACCCTGAACTTTTGCTTA+GGG | - | chr4.2:38763644-38763663 | None:intergenic | 45.0% |
| ! | GTTCCAAACACACTGACTGT+AGG | + | chr4.2:38763380-38763399 | MS.gene46509:intron | 45.0% |
| !! | ACTTGGTGGATTTGGGAACT+GGG | - | chr4.2:38767444-38767463 | None:intergenic | 45.0% |
| !! | CAAGAGTGTCACTGCAATTG+TGG | + | chr4.2:38767085-38767104 | MS.gene46509:CDS | 45.0% |
| !! | CTTCCAGACTTGGTGGATTT+GGG | - | chr4.2:38767451-38767470 | None:intergenic | 45.0% |
| !! | GGAAAGAAGATTTGCTGTCC+TGG | + | chr4.2:38764932-38764951 | MS.gene46509:intron | 45.0% |
| !! | GGGTGAGGAAGTGTTTCATA+TGG | - | chr4.2:38763911-38763930 | None:intergenic | 45.0% |
| !!! | GATCGTTTTGAAGAAGGCGT+TGG | - | chr4.2:38765397-38765416 | None:intergenic | 45.0% |
| !!! | GTCGTCTCCTTGGTTTGTTT+TGG | + | chr4.2:38762745-38762764 | MS.gene46509:CDS | 45.0% |
| AACAAACCAAGGAGACGACG+AGG | - | chr4.2:38762744-38762763 | None:intergenic | 50.0% | |
| ACAAACCAAGGAGACGACGA+GGG | - | chr4.2:38762743-38762762 | None:intergenic | 50.0% | |
| AGATGCACCAGTGGACACTA+TGG | + | chr4.2:38764515-38764534 | MS.gene46509:CDS | 50.0% | |
| AGTTGGGAGATCACGAAGCT+TGG | - | chr4.2:38766676-38766695 | None:intergenic | 50.0% | |
| ATGTCCACCGCATCTGCAAT+CGG | + | chr4.2:38765952-38765971 | MS.gene46509:CDS | 50.0% | |
| CACCAGCACCAAGATGCTAT+GGG | - | chr4.2:38766075-38766094 | None:intergenic | 50.0% | |
| CACTGCAATTGTGGCTTCCA+AGG | + | chr4.2:38767094-38767113 | MS.gene46509:CDS | 50.0% | |
| CCAAATCCACCAAGTCTGGA+AGG | + | chr4.2:38767449-38767468 | MS.gene46509:CDS | 50.0% | |
| CTCGGTTGGGTGTCAAGATT+GGG | + | chr4.2:38765975-38765994 | MS.gene46509:CDS | 50.0% | |
| CTTCGGACGTAGACATGAAC+TGG | - | chr4.2:38762875-38762894 | None:intergenic | 50.0% | |
| CTTGTTCCTTCCAGACTTGG+TGG | - | chr4.2:38767458-38767477 | None:intergenic | 50.0% | |
| GATGCACCAGTGGACACTAT+GGG | + | chr4.2:38764516-38764535 | MS.gene46509:CDS | 50.0% | |
| GCCAAATGCCAATGTGCAAC+TGG | - | chr4.2:38766453-38766472 | None:intergenic | 50.0% | |
| GCCAGTTGCACATTGGCATT+TGG | + | chr4.2:38766449-38766468 | MS.gene46509:intron | 50.0% | |
| GGACGTAGACATGAACTGGT+TGG | - | chr4.2:38762871-38762890 | None:intergenic | 50.0% | |
| GTAGGTGTAGGTGTAGGTGT+CGG | - | chr4.2:38766872-38766891 | None:intergenic | 50.0% | |
| GTCAAGATTGGGCACGAAAC+AGG | + | chr4.2:38765986-38766005 | MS.gene46509:CDS | 50.0% | |
| GTCGGAGAGTTTGATGGAAG+CGG | - | chr4.2:38762819-38762838 | None:intergenic | 50.0% | |
| GTGGCTTCCAAGGGAAGAAT+GGG | + | chr4.2:38767104-38767123 | MS.gene46509:CDS | 50.0% | |
| GTGGCTTCTACCACACATAG+TGG | + | chr4.2:38763507-38763526 | MS.gene46509:CDS | 50.0% | |
| GTTCCCAAATCCACCAAGTC+TGG | + | chr4.2:38767445-38767464 | MS.gene46509:CDS | 50.0% | |
| TCACATCCCATAGTGTCCAC+TGG | - | chr4.2:38764525-38764544 | None:intergenic | 50.0% | |
| TCCAGGCATAGGTCCTAAGA+TGG | + | chr4.2:38765787-38765806 | MS.gene46509:CDS | 50.0% | |
| TGTGGCTTCCAAGGGAAGAA+TGG | + | chr4.2:38767103-38767122 | MS.gene46509:CDS | 50.0% | |
| ! | GGTAGTGGTGGTGATTCCTT+TGG | - | chr4.2:38762909-38762928 | None:intergenic | 50.0% |
| ! | TGGTTCTACGCTACCTCCTA+AGG | + | chr4.2:38764551-38764570 | MS.gene46509:CDS | 50.0% |
| ! | TTCCCATAGCATCTTGGTGC+TGG | + | chr4.2:38766070-38766089 | MS.gene46509:intron | 50.0% |
| !! | CCTTCCAGACTTGGTGGATT+TGG | - | chr4.2:38767452-38767471 | None:intergenic | 50.0% |
| !! | GACTTGGTGGATTTGGGAAC+TGG | - | chr4.2:38767445-38767464 | None:intergenic | 50.0% |
| !!! | CAATGGTGGCTTTTAGGGTG+AGG | - | chr4.2:38763926-38763945 | None:intergenic | 50.0% |
| AACCGAGCCGATTGCAGATG+CGG | - | chr4.2:38765962-38765981 | None:intergenic | 55.0% | |
| CTTGTGTCCATCCGCGTTCA+AGG | + | chr4.2:38767402-38767421 | MS.gene46509:CDS | 55.0% | |
| GCACCAGCACCAAGATGCTA+TGG | - | chr4.2:38766076-38766095 | None:intergenic | 55.0% | |
| GCCATCTTAGGACCTATGCC+TGG | - | chr4.2:38765791-38765810 | None:intergenic | 55.0% | |
| GCTCGGTTGGGTGTCAAGAT+TGG | + | chr4.2:38765974-38765993 | MS.gene46509:CDS | 55.0% | |
| GGCATTTGGCAGTGACTGAC+TGG | + | chr4.2:38766463-38766482 | MS.gene46509:intron | 55.0% | |
| GGCTACTGCCAGTTGCACAT+TGG | + | chr4.2:38766442-38766461 | MS.gene46509:intron | 55.0% | |
| GTCGGAGTCGGAGAGTTTGA+TGG | - | chr4.2:38762825-38762844 | None:intergenic | 55.0% | |
| TCTCCACAGCGAGGTCTTAG+AGG | - | chr4.2:38767367-38767386 | None:intergenic | 55.0% | |
| !! | AAGCTGAAGCGCCGGATTTG+GGG | - | chr4.2:38762847-38762866 | None:intergenic | 55.0% |
| !! | ACACCTCTAAGACCTCGCTG+TGG | + | chr4.2:38767361-38767380 | MS.gene46509:CDS | 55.0% |
| !! | CATCTGCAATCGGCTCGGTT+GGG | + | chr4.2:38765962-38765981 | MS.gene46509:CDS | 55.0% |
| !! | GAAGCTGAAGCGCCGGATTT+GGG | - | chr4.2:38762848-38762867 | None:intergenic | 55.0% |
| !! | GTGTTCTGGAGATGCACCAG+TGG | + | chr4.2:38764506-38764525 | MS.gene46509:CDS | 55.0% |
| ACCAAGGAGACGACGAGGGA+AGG | - | chr4.2:38762739-38762758 | None:intergenic | 60.0% | |
| ACCTGCGGCTTCCTTGAACG+CGG | - | chr4.2:38767416-38767435 | None:intergenic | 60.0% | |
| ACGCTGGGAAGAGACGCTTG+AGG | + | chr4.2:38764467-38764486 | MS.gene46509:CDS | 60.0% | |
| CACCGCATCTGCAATCGGCT+CGG | + | chr4.2:38765957-38765976 | MS.gene46509:CDS | 60.0% | |
| CGCTGGGAAGAGACGCTTGA+GGG | + | chr4.2:38764468-38764487 | MS.gene46509:CDS | 60.0% | |
| GGGAACTGGGCTTGTACCTG+CGG | - | chr4.2:38767431-38767450 | None:intergenic | 60.0% | |
| GGGGCGATTCCCTACAGTCA+AGG | - | chr4.2:38763409-38763428 | None:intergenic | 60.0% | |
| TCCGACTCCGACCCCAAATC+CGG | + | chr4.2:38762833-38762852 | MS.gene46509:CDS | 60.0% | |
| TCCTTCCCTCGTCGTCTCCT+TGG | + | chr4.2:38762735-38762754 | MS.gene46509:CDS | 60.0% | |
| TGGTTGGGAAGCTGAAGCGC+CGG | - | chr4.2:38762855-38762874 | None:intergenic | 60.0% | |
| !! | GCATCTGCAATCGGCTCGGT+TGG | + | chr4.2:38765961-38765980 | MS.gene46509:CDS | 60.0% |
| !! | GGAAGCTGAAGCGCCGGATT+TGG | - | chr4.2:38762849-38762868 | None:intergenic | 60.0% |
| !! | TGAAGCGCCGGATTTGGGGT+CGG | - | chr4.2:38762843-38762862 | None:intergenic | 60.0% |
| AGCGTCTCTTCCCAGCGTGC+AGG | - | chr4.2:38764465-38764484 | None:intergenic | 65.0% | |
| CGAGCCGATTGCAGATGCGG+TGG | - | chr4.2:38765959-38765978 | None:intergenic | 65.0% | |
| GCGGCTTCCTTGAACGCGGA+TGG | - | chr4.2:38767412-38767431 | None:intergenic | 65.0% | |
| TCCGCGTTCAAGGAAGCCGC+AGG | + | chr4.2:38767412-38767431 | MS.gene46509:CDS | 65.0% | |
| ! | GCCGGATTTGGGGTCGGAGT+CGG | - | chr4.2:38762837-38762856 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 38762728 | 38767486 | 38762728 | ID=MS.gene46509 |
| chr4.2 | mRNA | 38762728 | 38767486 | 38762728 | ID=MS.gene46509.t1;Parent=MS.gene46509 |
| chr4.2 | exon | 38762728 | 38762976 | 38762728 | ID=MS.gene46509.t1.exon1;Parent=MS.gene46509.t1 |
| chr4.2 | CDS | 38762728 | 38762976 | 38762728 | ID=cds.MS.gene46509.t1;Parent=MS.gene46509.t1 |
| chr4.2 | exon | 38763225 | 38763288 | 38763225 | ID=MS.gene46509.t1.exon2;Parent=MS.gene46509.t1 |
| chr4.2 | CDS | 38763225 | 38763288 | 38763225 | ID=cds.MS.gene46509.t1;Parent=MS.gene46509.t1 |
| chr4.2 | exon | 38763463 | 38763528 | 38763463 | ID=MS.gene46509.t1.exon3;Parent=MS.gene46509.t1 |
| chr4.2 | CDS | 38763463 | 38763528 | 38763463 | ID=cds.MS.gene46509.t1;Parent=MS.gene46509.t1 |
| chr4.2 | exon | 38764454 | 38764572 | 38764454 | ID=MS.gene46509.t1.exon4;Parent=MS.gene46509.t1 |
| chr4.2 | CDS | 38764454 | 38764572 | 38764454 | ID=cds.MS.gene46509.t1;Parent=MS.gene46509.t1 |
| chr4.2 | exon | 38764933 | 38764999 | 38764933 | ID=MS.gene46509.t1.exon5;Parent=MS.gene46509.t1 |
| chr4.2 | CDS | 38764933 | 38764999 | 38764933 | ID=cds.MS.gene46509.t1;Parent=MS.gene46509.t1 |
| chr4.2 | exon | 38765387 | 38765478 | 38765387 | ID=MS.gene46509.t1.exon6;Parent=MS.gene46509.t1 |
| chr4.2 | CDS | 38765387 | 38765478 | 38765387 | ID=cds.MS.gene46509.t1;Parent=MS.gene46509.t1 |
| chr4.2 | exon | 38765680 | 38765817 | 38765680 | ID=MS.gene46509.t1.exon7;Parent=MS.gene46509.t1 |
| chr4.2 | CDS | 38765680 | 38765817 | 38765680 | ID=cds.MS.gene46509.t1;Parent=MS.gene46509.t1 |
| chr4.2 | exon | 38765903 | 38766007 | 38765903 | ID=MS.gene46509.t1.exon8;Parent=MS.gene46509.t1 |
| chr4.2 | CDS | 38765903 | 38766007 | 38765903 | ID=cds.MS.gene46509.t1;Parent=MS.gene46509.t1 |
| chr4.2 | exon | 38767063 | 38767146 | 38767063 | ID=MS.gene46509.t1.exon9;Parent=MS.gene46509.t1 |
| chr4.2 | CDS | 38767063 | 38767146 | 38767063 | ID=cds.MS.gene46509.t1;Parent=MS.gene46509.t1 |
| chr4.2 | exon | 38767337 | 38767486 | 38767337 | ID=MS.gene46509.t1.exon10;Parent=MS.gene46509.t1 |
| chr4.2 | CDS | 38767337 | 38767486 | 38767337 | ID=cds.MS.gene46509.t1;Parent=MS.gene46509.t1 |
| Gene Sequence |
| Protein sequence |
