Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54568.t1 | RHN61142.1 | 87.4 | 381 | 43 | 1 | 1 | 376 | 27 | 407 | 2.40E-184 | 654.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54568.t1 | Q9SIC4 | 60.9 | 348 | 122 | 5 | 29 | 375 | 44 | 378 | 5.1e-111 | 402.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54568.t1 | A0A072UMM8 | 87.4 | 381 | 43 | 1 | 1 | 376 | 1 | 381 | 1.7e-184 | 654.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene032779 | MS.gene54568 | PPI |
| MS.gene54568 | MS.gene46509 | PPI |
| MS.gene54568 | MS.gene03207 | PPI |
| MS.gene066288 | MS.gene54568 | PPI |
| MS.gene02580 | MS.gene54568 | PPI |
| MS.gene54568 | MS.gene013797 | PPI |
| MS.gene54568 | MS.gene49595 | PPI |
| MS.gene54568 | MS.gene003895 | PPI |
| MS.gene54568 | MS.gene99026 | PPI |
| MS.gene54568 | MS.gene28350 | PPI |
| MS.gene73789 | MS.gene54568 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54568.t1 | MTR_4g067060 | 94.751 | 381 | 15 | 1 | 1 | 376 | 1 | 381 | 0.0 | 740 |
| MS.gene54568.t1 | MTR_2g098660 | 59.509 | 326 | 101 | 3 | 32 | 357 | 17 | 311 | 3.63e-129 | 374 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54568.t1 | AT2G31450 | 58.217 | 359 | 135 | 6 | 3 | 357 | 13 | 360 | 4.33e-141 | 406 |
| MS.gene54568.t1 | AT2G31450 | 57.618 | 361 | 136 | 6 | 3 | 357 | 13 | 362 | 5.40e-140 | 403 |
| MS.gene54568.t1 | AT1G05900 | 57.831 | 332 | 121 | 7 | 36 | 357 | 47 | 369 | 1.38e-129 | 377 |
| MS.gene54568.t1 | AT1G05900 | 53.791 | 277 | 109 | 7 | 36 | 302 | 47 | 314 | 7.96e-94 | 283 |
Find 96 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTCCTTGGTTTGTTT+TGG | 0.126886 | 4.3:+37312943 | MS.gene54568:CDS |
| CATACCAATAGAGGATTAAT+TGG | 0.189975 | 4.3:-37317312 | None:intergenic |
| CCTTCCAGACTTTGTGGATT+TGG | 0.219900 | 4.3:-37317633 | None:intergenic |
| TATGCAAAGTCTTCAATTTC+AGG | 0.246614 | 4.3:-37313462 | None:intergenic |
| GACTTTGTGGATTTGGAAAC+TGG | 0.256916 | 4.3:-37317626 | None:intergenic |
| ATTGAAGACTTTGCATATAA+AGG | 0.268285 | 4.3:+37313468 | MS.gene54568:CDS |
| GAATATCAACAGGTTGGATT+TGG | 0.297080 | 4.3:+37317509 | MS.gene54568:intron |
| TCCTTCCCTCTTCTTCTCCT+TGG | 0.330134 | 4.3:+37312933 | MS.gene54568:CDS |
| CAGGAGTAAGCAGATCGTTT+TGG | 0.335207 | 4.3:-37315635 | None:intergenic |
| CTTGTTCCTTCCAGACTTTG+TGG | 0.347242 | 4.3:-37317639 | None:intergenic |
| GGAAGGTGAAGCGCCGGATG+TGG | 0.358702 | 4.3:-37313044 | None:intergenic |
| CGTACCAAATGAGCCATCTT+AGG | 0.361048 | 4.3:-37316026 | None:intergenic |
| GATTGATATGATCCTTGGTT+TGG | 0.364085 | 4.3:-37315202 | None:intergenic |
| TCTCCACAGCGAGGTCTTAG+AGG | 0.373498 | 4.3:-37317548 | None:intergenic |
| CTTCGAACGTAGACATGAAC+TGG | 0.385985 | 4.3:-37313070 | None:intergenic |
| ATTCGCAAAATGAGGTGTTC+TGG | 0.390605 | 4.3:+37314720 | MS.gene54568:CDS |
| AGTGACACTCTTGTCTCTTC+AGG | 0.393822 | 4.3:-37317258 | None:intergenic |
| GCTAGGTTGGGTGTCAAGAT+TGG | 0.402226 | 4.3:+37316200 | MS.gene54568:CDS |
| GTCAAGATTGGGCACGAAAC+AGG | 0.402226 | 4.3:+37316212 | MS.gene54568:CDS |
| GGATCCAATTAATCCTCTAT+TGG | 0.402662 | 4.3:+37317308 | MS.gene54568:CDS |
| CTTGTGTCCATCCGCGTTCA+AGG | 0.402709 | 4.3:+37317586 | MS.gene54568:CDS |
| ACCATGATTGATATGATCCT+TGG | 0.409171 | 4.3:-37315207 | None:intergenic |
| TGTGATAGTGGTGATTCCTT+TGG | 0.409819 | 4.3:-37313104 | None:intergenic |
| AGGTCCTAAGATGGCTCATT+TGG | 0.410105 | 4.3:+37316022 | MS.gene54568:CDS |
| TCAGCATTGTTAATTGCATC+AGG | 0.415747 | 4.3:-37315654 | None:intergenic |
| GAAGGTGAAGCGCCGGATGT+GGG | 0.423251 | 4.3:-37313043 | None:intergenic |
| GCATTTGCAACCGGCTAGGT+TGG | 0.423522 | 4.3:+37316187 | MS.gene54568:CDS |
| ACTTTATGAGTCTGTGTTGA+AGG | 0.425998 | 4.3:-37313151 | None:intergenic |
| AGATGCACCAGTGGACACTA+TGG | 0.426856 | 4.3:+37314743 | MS.gene54568:CDS |
| CATTTGCAACCGGCTAGGTT+GGG | 0.435479 | 4.3:+37316188 | MS.gene54568:CDS |
| ATTGGATCCCATTCTTCCCT+TGG | 0.438799 | 4.3:-37317294 | None:intergenic |
| GTTTCCAAATCCACAAAGTC+TGG | 0.441504 | 4.3:+37317629 | MS.gene54568:CDS |
| AATATTTGTCTCATGAAGTA+TGG | 0.442213 | 4.3:+37315951 | MS.gene54568:CDS |
| GTCGGAGTCGGAGGGTTTGA+TGG | 0.443482 | 4.3:-37313020 | None:intergenic |
| CACTGCAATTGTGGCTTCCA+AGG | 0.443592 | 4.3:+37317277 | MS.gene54568:CDS |
| CTAGGTTGGGTGTCAAGATT+GGG | 0.445487 | 4.3:+37316201 | MS.gene54568:CDS |
| GAGCAACTACTACAACTTCC+AGG | 0.449603 | 4.3:+37315996 | MS.gene54568:CDS |
| TGTGGCTTCCAAGGGAAGAA+TGG | 0.449796 | 4.3:+37317286 | MS.gene54568:CDS |
| AACAAACCAAGGAGAAGAAG+AGG | 0.451817 | 4.3:-37312939 | None:intergenic |
| TCCGACTCCGACCCCACATC+CGG | 0.458673 | 4.3:+37313031 | MS.gene54568:CDS |
| TGAGTTTACCATACCAATAG+AGG | 0.473658 | 4.3:-37317321 | None:intergenic |
| ATGTCCACCGCATTTGCAAC+CGG | 0.475393 | 4.3:+37316178 | MS.gene54568:CDS |
| TGGTTCTACGCTACCTCCTA+AGG | 0.476967 | 4.3:+37314779 | MS.gene54568:CDS |
| GGATGTGGGGTCGGAGTCGG+AGG | 0.478433 | 4.3:-37313029 | None:intergenic |
| GCCGGATGTGGGGTCGGAGT+CGG | 0.478888 | 4.3:-37313032 | None:intergenic |
| CGCTGGGAAGAGACGCTTGA+GGG | 0.484720 | 4.3:+37314696 | MS.gene54568:CDS |
| GTGGCTTCCAAGGGAAGAAT+GGG | 0.487229 | 4.3:+37317287 | MS.gene54568:CDS |
| AGTTAAATCACCTGCACGCT+GGG | 0.490042 | 4.3:+37314680 | MS.gene54568:intron |
| GCGGCTTCCTTGAACGCGGA+TGG | 0.496718 | 4.3:-37317593 | None:intergenic |
| AACGTAGACATGAACTGGTT+GGG | 0.499633 | 4.3:-37313065 | None:intergenic |
| AGCGTCTCTTCCCAGCGTGC+AGG | 0.503259 | 4.3:-37314690 | None:intergenic |
| ACCAAGGATCATATCAATCA+TGG | 0.504759 | 4.3:+37315206 | MS.gene54568:CDS |
| GGAAAGAAGATTTGCTGTCC+TGG | 0.508321 | 4.3:+37315160 | MS.gene54568:intron |
| GAACGTAGACATGAACTGGT+TGG | 0.512616 | 4.3:-37313066 | None:intergenic |
| CAAGAGTGTCACTGCAATTG+TGG | 0.515306 | 4.3:+37317268 | MS.gene54568:CDS |
| AAGGTGAAGCGCCGGATGTG+GGG | 0.526069 | 4.3:-37313042 | None:intergenic |
| AACCTAGCCGGTTGCAAATG+CGG | 0.543539 | 4.3:-37316185 | None:intergenic |
| CACCGCATTTGCAACCGGCT+AGG | 0.546206 | 4.3:+37316183 | MS.gene54568:CDS |
| ATCTTGACACCCAACCTAGC+CGG | 0.548579 | 4.3:-37316197 | None:intergenic |
| TAGTTAAATCACCTGCACGC+TGG | 0.549770 | 4.3:+37314679 | MS.gene54568:intron |
| TCCAGGCATAGGTCCTAAGA+TGG | 0.552749 | 4.3:+37316013 | MS.gene54568:CDS |
| GTCGGAGGGTTTGATGGAAG+CGG | 0.554466 | 4.3:-37313014 | None:intergenic |
| GCCATCTTAGGACCTATGCC+TGG | 0.556487 | 4.3:-37316014 | None:intergenic |
| TCACATCCCATAGTGTCCAC+TGG | 0.558188 | 4.3:-37314750 | None:intergenic |
| TCCGCGTTCAAGGAAGCCGC+AGG | 0.569401 | 4.3:+37317596 | MS.gene54568:CDS |
| GAAGCAACCTCACTTTCAGT+TGG | 0.569694 | 4.3:-37313703 | None:intergenic |
| TGAAGCGCCGGATGTGGGGT+CGG | 0.571342 | 4.3:-37313038 | None:intergenic |
| ACTTTGTGGATTTGGAAACT+GGG | 0.574587 | 4.3:-37317625 | None:intergenic |
| AATAGGTTATGAATGTTGCA+TGG | 0.580611 | 4.3:+37316124 | MS.gene54568:intron |
| ACCAAGGAGAAGAAGAGGGA+AGG | 0.583000 | 4.3:-37312934 | None:intergenic |
| TTGAGGGTATTCGCAAAATG+AGG | 0.585116 | 4.3:+37314712 | MS.gene54568:CDS |
| TTGATAAAAGAGAAGATACC+AGG | 0.586566 | 4.3:-37315178 | None:intergenic |
| ACAAACCAAGGAGAAGAAGA+GGG | 0.590136 | 4.3:-37312938 | None:intergenic |
| ACTGCAATTGTGGCTTCCAA+GGG | 0.592814 | 4.3:+37317278 | MS.gene54568:CDS |
| GGAAACTGGGCTTGAACCTG+CGG | 0.593260 | 4.3:-37317612 | None:intergenic |
| GAGTATCTACACATATCCCT+TGG | 0.595774 | 4.3:-37316155 | None:intergenic |
| GTTGCATGGAACAATGTCCA+AGG | 0.599309 | 4.3:+37316138 | MS.gene54568:CDS |
| CTACTACAACTTCCAGGCAT+AGG | 0.599409 | 4.3:+37316002 | MS.gene54568:CDS |
| CCAAATCCACAAAGTCTGGA+AGG | 0.601753 | 4.3:+37317633 | MS.gene54568:CDS |
| GATGTGGGGTCGGAGTCGGA+GGG | 0.601933 | 4.3:-37313028 | None:intergenic |
| ATACAGGGTCAAACCTTAGG+AGG | 0.609377 | 4.3:-37314792 | None:intergenic |
| TGGTTGGGAAGGTGAAGCGC+CGG | 0.614544 | 4.3:-37313050 | None:intergenic |
| ATTTGTCTCATGAAGTATGG+TGG | 0.625018 | 4.3:+37315954 | MS.gene54568:CDS |
| TGATGCAATTAACAATGCTG+AGG | 0.635618 | 4.3:+37315656 | MS.gene54568:CDS |
| ACTATGGGATGTGAGAAAGC+TGG | 0.636572 | 4.3:+37314759 | MS.gene54568:CDS |
| ACCTGCGGCTTCCTTGAACG+CGG | 0.637155 | 4.3:-37317597 | None:intergenic |
| TAGACATGAACTGGTTGGGA+AGG | 0.640593 | 4.3:-37313061 | None:intergenic |
| CAACTTCCCAAAACAAACCA+AGG | 0.641374 | 4.3:-37312950 | None:intergenic |
| GATGCACCAGTGGACACTAT+GGG | 0.645959 | 4.3:+37314744 | MS.gene54568:CDS |
| TTGCATGGAACAATGTCCAA+GGG | 0.659236 | 4.3:+37316139 | MS.gene54568:CDS |
| GTGTTCTGGAGATGCACCAG+TGG | 0.660918 | 4.3:+37314734 | MS.gene54568:CDS |
| CTAGCCGGTTGCAAATGCGG+TGG | 0.679611 | 4.3:-37316182 | None:intergenic |
| TGTGACTCCAACTGAAAGTG+AGG | 0.693791 | 4.3:+37313696 | MS.gene54568:CDS |
| ACGCTGGGAAGAGACGCTTG+AGG | 0.696005 | 4.3:+37314695 | MS.gene54568:CDS |
| ACACCTCTAAGACCTCGCTG+TGG | 0.758067 | 4.3:+37317545 | MS.gene54568:CDS |
| ATACTACATTCTCCACAGCG+AGG | 0.775449 | 4.3:-37317557 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATTCTTTATTTTTAAC+GGG | + | chr4.3:37313190-37313209 | MS.gene54568:intron | 10.0% |
| !!! | CATTAATTCTTTATTTTTAA+CGG | + | chr4.3:37313189-37313208 | MS.gene54568:intron | 10.0% |
| !! | ATGTTTCGAATTTAATAAAT+CGG | + | chr4.3:37316855-37316874 | MS.gene54568:intron | 15.0% |
| !! | TATATACTAAAAACTTTAGA+AGG | - | chr4.3:37315244-37315263 | None:intergenic | 15.0% |
| !! | TGGATAATAATTTAAGAAAA+TGG | - | chr4.3:37317104-37317123 | None:intergenic | 15.0% |
| !!! | AAATGTGTTTTTATGAATAT+AGG | + | chr4.3:37315594-37315613 | MS.gene54568:intron | 15.0% |
| !!! | AACATAATCAAATTCTAAAA+AGG | + | chr4.3:37314348-37314367 | MS.gene54568:intron | 15.0% |
| !!! | AATGTGTTTTTATGAATATA+GGG | + | chr4.3:37315595-37315614 | MS.gene54568:intron | 15.0% |
| !!! | ACATAATCAAATTCTAAAAA+GGG | + | chr4.3:37314349-37314368 | MS.gene54568:intron | 15.0% |
| !!! | ATAATACTTGTTAAATTTTC+TGG | + | chr4.3:37315261-37315280 | MS.gene54568:intron | 15.0% |
| !!! | TAATACTTTTAAAAGAAACA+GGG | - | chr4.3:37315718-37315737 | None:intergenic | 15.0% |
| !!! | TTAATTTGATATTTCAGTTT+GGG | + | chr4.3:37314825-37314844 | MS.gene54568:intron | 15.0% |
| !!! | TTCTTTTAAAAGTATTACAT+TGG | + | chr4.3:37315721-37315740 | MS.gene54568:intron | 15.0% |
| !! | AAATTGTTAATCAAGAAACT+TGG | + | chr4.3:37314231-37314250 | MS.gene54568:intron | 20.0% |
| !! | AATTGTTAATCAAGAAACTT+GGG | + | chr4.3:37314232-37314251 | MS.gene54568:intron | 20.0% |
| !! | ATATAGTAAATAGTTGCAAA+TGG | + | chr4.3:37313757-37313776 | MS.gene54568:intron | 20.0% |
| !! | GTACTAAAATATATACACAA+AGG | - | chr4.3:37314426-37314445 | None:intergenic | 20.0% |
| !! | TAATCTTGTATTGAATTGAT+TGG | + | chr4.3:37315046-37315065 | MS.gene54568:intron | 20.0% |
| !! | TAATTTGATATTTCAGTTTG+GGG | + | chr4.3:37314826-37314845 | MS.gene54568:intron | 20.0% |
| !! | TAGTTAACTTATTTAACGAA+CGG | + | chr4.3:37315476-37315495 | MS.gene54568:intron | 20.0% |
| !! | TTACTGTAAAAAACACAAAT+GGG | - | chr4.3:37313304-37313323 | None:intergenic | 20.0% |
| !! | TTTACTGTAAAAAACACAAA+TGG | - | chr4.3:37313305-37313324 | None:intergenic | 20.0% |
| !!! | AAATTAGTCTCATGTTAATA+TGG | - | chr4.3:37314574-37314593 | None:intergenic | 20.0% |
| !!! | AATTAACAGAAGTATAATAC+AGG | - | chr4.3:37314811-37314830 | None:intergenic | 20.0% |
| !!! | ACTTTATCATGACATTTTTT+TGG | + | chr4.3:37316422-37316441 | MS.gene54568:intron | 20.0% |
| !!! | ATGTGTTTTTATGAATATAG+GGG | + | chr4.3:37315596-37315615 | MS.gene54568:intron | 20.0% |
| !!! | ATTAACAGAAGTATAATACA+GGG | - | chr4.3:37314810-37314829 | None:intergenic | 20.0% |
| !!! | CTTTATCATGACATTTTTTT+GGG | + | chr4.3:37316423-37316442 | MS.gene54568:intron | 20.0% |
| !!! | GTAATACTTTTAAAAGAAAC+AGG | - | chr4.3:37315719-37315738 | None:intergenic | 20.0% |
| !!! | GTTAATTTGATATTTCAGTT+TGG | + | chr4.3:37314824-37314843 | MS.gene54568:intron | 20.0% |
| !!! | TTATTGTGTCAATTCTTTTA+AGG | + | chr4.3:37315818-37315837 | MS.gene54568:intron | 20.0% |
| !!! | TTATTTGTTGATTTATGTCT+TGG | + | chr4.3:37314862-37314881 | MS.gene54568:intron | 20.0% |
| !!! | TTTTTTTTGTTTCTTTTTCC+AGG | + | chr4.3:37315884-37315903 | MS.gene54568:intron | 20.0% |
| ! | AAAATTGCACAGGTTAAATT+TGG | - | chr4.3:37317351-37317370 | None:intergenic | 25.0% |
| ! | AATAATTAATGTAGCAAAGC+AGG | + | chr4.3:37314256-37314275 | MS.gene54568:intron | 25.0% |
| ! | AATATTTGTCTCATGAAGTA+TGG | + | chr4.3:37315951-37315970 | MS.gene54568:CDS | 25.0% |
| ! | ATATAAGAGTAAAATTGCAC+AGG | - | chr4.3:37317361-37317380 | None:intergenic | 25.0% |
| ! | ATATATACACAAAGGAAAGA+TGG | - | chr4.3:37314418-37314437 | None:intergenic | 25.0% |
| ! | ATGAAAAACACCTAAAACAA+TGG | - | chr4.3:37314171-37314190 | None:intergenic | 25.0% |
| ! | ATTGAAGACTTTGCATATAA+AGG | + | chr4.3:37313468-37313487 | MS.gene54568:CDS | 25.0% |
| ! | CACATACTTCAAAAGTAAAA+TGG | - | chr4.3:37315509-37315528 | None:intergenic | 25.0% |
| ! | CCAGATAGTTAAAACTTAAA+AGG | + | chr4.3:37315354-37315373 | MS.gene54568:intron | 25.0% |
| ! | GCATTATATAATACCAAAAG+AGG | - | chr4.3:37314206-37314225 | None:intergenic | 25.0% |
| ! | GTTTCTCAATCTTTCTATTT+AGG | + | chr4.3:37313251-37313270 | MS.gene54568:intron | 25.0% |
| ! | TACACGTTAGAAATTATTCT+TGG | + | chr4.3:37316996-37317015 | MS.gene54568:intron | 25.0% |
| ! | TAGAAATTATTCTTGGTAAG+TGG | + | chr4.3:37317003-37317022 | MS.gene54568:intron | 25.0% |
| ! | TATATCTGTTGAATATCAAC+AGG | + | chr4.3:37317499-37317518 | MS.gene54568:intron | 25.0% |
| ! | TCAAAGAAGAAAAAGAATAC+TGG | + | chr4.3:37315382-37315401 | MS.gene54568:intron | 25.0% |
| ! | TTAAATGTAACCAAATGTGT+AGG | - | chr4.3:37317075-37317094 | None:intergenic | 25.0% |
| ! | TTGATATGCTACAATATACA+TGG | + | chr4.3:37316446-37316465 | MS.gene54568:intron | 25.0% |
| !! | AACACAAGGAATTTTCAATT+TGG | + | chr4.3:37317430-37317449 | MS.gene54568:intron | 25.0% |
| !! | ATACTTTTATAAGATCGTCT+AGG | - | chr4.3:37313641-37313660 | None:intergenic | 25.0% |
| !!! | AAATGTATCCATTTTGTTTC+TGG | + | chr4.3:37316396-37316415 | MS.gene54568:intron | 25.0% |
| !!! | ATAACATGGGAATTTTGATA+AGG | - | chr4.3:37315138-37315157 | None:intergenic | 25.0% |
| !!! | CCTTTTAAGTTTTAACTATC+TGG | - | chr4.3:37315357-37315376 | None:intergenic | 25.0% |
| !!! | TATCTGTTTTTGTAGAAGTT+TGG | + | chr4.3:37313435-37313454 | MS.gene54568:intron | 25.0% |
| !!! | TGCAATTTTTTTCAAGTTAG+TGG | - | chr4.3:37315931-37315950 | None:intergenic | 25.0% |
| !!! | TGTTTTAGTGCTTTATAACT+TGG | + | chr4.3:37317152-37317171 | MS.gene54568:intron | 25.0% |
| !!! | TTACATTGGTTCAAATGATT+TGG | + | chr4.3:37315735-37315754 | MS.gene54568:intron | 25.0% |
| AAAAACACCTAAAACAATGG+TGG | - | chr4.3:37314168-37314187 | None:intergenic | 30.0% | |
| AAAGTCTACCAGAAACAAAA+TGG | - | chr4.3:37316407-37316426 | None:intergenic | 30.0% | |
| AAGAGACTTATGAAGATTCA+AGG | + | chr4.3:37315777-37315796 | MS.gene54568:intron | 30.0% | |
| AATAGGTTATGAATGTTGCA+TGG | + | chr4.3:37316124-37316143 | MS.gene54568:intron | 30.0% | |
| AATCTTCTTTCCTGATAACA+TGG | - | chr4.3:37315152-37315171 | None:intergenic | 30.0% | |
| AATTCTATCAGTCAAACAGT+AGG | - | chr4.3:37314602-37314621 | None:intergenic | 30.0% | |
| ACATTCTTGAGAAAATGTCA+TGG | - | chr4.3:37314474-37314493 | None:intergenic | 30.0% | |
| ATACCATGAGCTTCTATTTA+CGG | + | chr4.3:37314055-37314074 | MS.gene54568:intron | 30.0% | |
| ATCAAAATTCCCATGTTATC+AGG | + | chr4.3:37315139-37315158 | MS.gene54568:intron | 30.0% | |
| ATCTTCTTTCCTGATAACAT+GGG | - | chr4.3:37315151-37315170 | None:intergenic | 30.0% | |
| ATTAATATGATATCAGAGCC+TGG | - | chr4.3:37316554-37316573 | None:intergenic | 30.0% | |
| ATTCTATCAGTCAAACAGTA+GGG | - | chr4.3:37314601-37314620 | None:intergenic | 30.0% | |
| ATTTCAGATTCCTTGAAGTT+GGG | - | chr4.3:37316942-37316961 | None:intergenic | 30.0% | |
| CAATTAATCCTCTATTGGTA+TGG | + | chr4.3:37317313-37317332 | MS.gene54568:intron | 30.0% | |
| CATACCAATAGAGGATTAAT+TGG | - | chr4.3:37317315-37317334 | None:intergenic | 30.0% | |
| GCTATGGGAACAAATAAATT+AGG | - | chr4.3:37316286-37316305 | None:intergenic | 30.0% | |
| TACTTCAAAAGTAAAATGGC+AGG | - | chr4.3:37315505-37315524 | None:intergenic | 30.0% | |
| TAGAAGCTCATGGTATAATT+CGG | - | chr4.3:37314051-37314070 | None:intergenic | 30.0% | |
| TATGCAAAGTCTTCAATTTC+AGG | - | chr4.3:37313465-37313484 | None:intergenic | 30.0% | |
| TATTTCAGATTCCTTGAAGT+TGG | - | chr4.3:37316943-37316962 | None:intergenic | 30.0% | |
| TGAGATTACATCTTACAAAG+TGG | + | chr4.3:37316650-37316669 | MS.gene54568:intron | 30.0% | |
| TGCTACAATATACATGGATT+TGG | + | chr4.3:37316452-37316471 | MS.gene54568:intron | 30.0% | |
| TTCTCAACTTAATCAGTTAC+TGG | - | chr4.3:37316742-37316761 | None:intergenic | 30.0% | |
| TTGATAAAAGAGAAGATACC+AGG | - | chr4.3:37315181-37315200 | None:intergenic | 30.0% | |
| TTTAACTATCTGGTGTGAAT+CGG | - | chr4.3:37315347-37315366 | None:intergenic | 30.0% | |
| TTTCAGTTCAGCAAAAAACA+AGG | - | chr4.3:37313989-37314008 | None:intergenic | 30.0% | |
| ! | CATTTCTGATTTTACTGCAA+CGG | - | chr4.3:37313668-37313687 | None:intergenic | 30.0% |
| ! | GATGTAGTTTTTCTGTCATT+TGG | + | chr4.3:37317174-37317193 | MS.gene54568:intron | 30.0% |
| ! | TAAAACAATGGTGGCTTTTA+GGG | - | chr4.3:37314159-37314178 | None:intergenic | 30.0% |
| ! | TAAATGCTTATCTCCTCTTT+TGG | + | chr4.3:37314190-37314209 | MS.gene54568:intron | 30.0% |
| ! | TGGGTAAATCAACTTTTTGA+TGG | - | chr4.3:37315688-37315707 | None:intergenic | 30.0% |
| ! | TTGCAAATGGCAATTGTTTT+AGG | + | chr4.3:37313770-37313789 | MS.gene54568:intron | 30.0% |
| !! | AAGGTTATGTTTGTTTTTCG+CGG | + | chr4.3:37315837-37315856 | MS.gene54568:intron | 30.0% |
| !! | ACTCTTCATTTTAACAATGC+TGG | + | chr4.3:37314284-37314303 | MS.gene54568:intron | 30.0% |
| !! | ATTTTTAACGGGTCATTCAT+GGG | + | chr4.3:37313201-37313220 | MS.gene54568:intron | 30.0% |
| !! | TATTTTTAACGGGTCATTCA+TGG | + | chr4.3:37313200-37313219 | MS.gene54568:intron | 30.0% |
| !! | TTGTTGAAGTTTTGTGATAG+TGG | - | chr4.3:37313119-37313138 | None:intergenic | 30.0% |
| !! | TTTCCTCTATTAGTCTTGAT+CGG | + | chr4.3:37316825-37316844 | MS.gene54568:intron | 30.0% |
| !! | TTTGTTTCTTTTTCCAGGTT+GGG | + | chr4.3:37315889-37315908 | MS.gene54568:intron | 30.0% |
| !! | TTTTGTTTCTTTTTCCAGGT+TGG | + | chr4.3:37315888-37315907 | MS.gene54568:intron | 30.0% |
| !!! | CTCAACGTATGATTTTTAGT+TGG | + | chr4.3:37315073-37315092 | MS.gene54568:intron | 30.0% |
| AAAAGAAACAGGGAACATAC+TGG | - | chr4.3:37315708-37315727 | None:intergenic | 35.0% | |
| AAAGAAACAGGGAACATACT+GGG | - | chr4.3:37315707-37315726 | None:intergenic | 35.0% | |
| ACCAAGGATCATATCAATCA+TGG | + | chr4.3:37315206-37315225 | MS.gene54568:CDS | 35.0% | |
| ACCATGATTGATATGATCCT+TGG | - | chr4.3:37315210-37315229 | None:intergenic | 35.0% | |
| ACTAATAGAGGAAAGAAGCT+AGG | - | chr4.3:37316819-37316838 | None:intergenic | 35.0% | |
| ACTTTATGAGTCTGTGTTGA+AGG | - | chr4.3:37313154-37313173 | None:intergenic | 35.0% | |
| ACTTTGTGGATTTGGAAACT+GGG | - | chr4.3:37317628-37317647 | None:intergenic | 35.0% | |
| ATAATACAGGGTCAAACCTT+AGG | - | chr4.3:37314798-37314817 | None:intergenic | 35.0% | |
| ATTATTCTTGGTAAGTGGCT+TGG | + | chr4.3:37317008-37317027 | MS.gene54568:intron | 35.0% | |
| ATTTGTCTCATGAAGTATGG+TGG | + | chr4.3:37315954-37315973 | MS.gene54568:CDS | 35.0% | |
| CACCTATAAGTCTATAGCAA+TGG | + | chr4.3:37314523-37314542 | MS.gene54568:intron | 35.0% | |
| CCAACTCTTGAAATGAGTAA+TGG | - | chr4.3:37314992-37315011 | None:intergenic | 35.0% | |
| CCATTACTCATTTCAAGAGT+TGG | + | chr4.3:37314989-37315008 | MS.gene54568:intron | 35.0% | |
| CGAAGAAACAAAAAAGCCAA+AGG | + | chr4.3:37313088-37313107 | MS.gene54568:CDS | 35.0% | |
| CTCCATTGCTATAGACTTAT+AGG | - | chr4.3:37314528-37314547 | None:intergenic | 35.0% | |
| GAAATGAGTAATGGCTATAC+TGG | - | chr4.3:37314983-37315002 | None:intergenic | 35.0% | |
| GATTACACGAATAGTTGACA+AGG | - | chr4.3:37315031-37315050 | None:intergenic | 35.0% | |
| GATTGATATGATCCTTGGTT+TGG | - | chr4.3:37315205-37315224 | None:intergenic | 35.0% | |
| GCATTATTGCAGCAATTTCA+TGG | - | chr4.3:37316497-37316516 | None:intergenic | 35.0% | |
| GGATCCAATTAATCCTCTAT+TGG | + | chr4.3:37317308-37317327 | MS.gene54568:CDS | 35.0% | |
| GTTCTTTCCTCTGTTAAAGA+TGG | - | chr4.3:37316532-37316551 | None:intergenic | 35.0% | |
| TACCATGAGCTTCTATTTAC+GGG | + | chr4.3:37314056-37314075 | MS.gene54568:intron | 35.0% | |
| TATCACACGTAAGAATGTCA+AGG | - | chr4.3:37313891-37313910 | None:intergenic | 35.0% | |
| TCAGCATTGTTAATTGCATC+AGG | - | chr4.3:37315657-37315676 | None:intergenic | 35.0% | |
| TCTGTTGAATATCAACAGGT+TGG | + | chr4.3:37317503-37317522 | MS.gene54568:intron | 35.0% | |
| TGAGTTTACCATACCAATAG+AGG | - | chr4.3:37317324-37317343 | None:intergenic | 35.0% | |
| TGATGCAATTAACAATGCTG+AGG | + | chr4.3:37315656-37315675 | MS.gene54568:CDS | 35.0% | |
| TGATGCCACCAAACTTAAAA+CGG | - | chr4.3:37316239-37316258 | None:intergenic | 35.0% | |
| TTACCCTAAGTAGAAGTTCA+GGG | + | chr4.3:37313864-37313883 | MS.gene54568:intron | 35.0% | |
| TTGCTGAACTGAAACTGATT+AGG | + | chr4.3:37313995-37314014 | MS.gene54568:intron | 35.0% | |
| TTTAATTATCCGTCCACTGT+AGG | + | chr4.3:37314113-37314132 | MS.gene54568:intron | 35.0% | |
| ! | AGTAGTTGCTCGATTTTACT+AGG | - | chr4.3:37315987-37316006 | None:intergenic | 35.0% |
| ! | ATGCTGGCTGTTTAATCATT+TGG | + | chr4.3:37314300-37314319 | MS.gene54568:intron | 35.0% |
| ! | CTAAAACAATGGTGGCTTTT+AGG | - | chr4.3:37314160-37314179 | None:intergenic | 35.0% |
| ! | CTAAAAGCCACCATTGTTTT+AGG | + | chr4.3:37314158-37314177 | MS.gene54568:intron | 35.0% |
| ! | GAATATCAACAGGTTGGATT+TGG | + | chr4.3:37317509-37317528 | MS.gene54568:intron | 35.0% |
| ! | GATTTTGTTAGTGGCACAAT+AGG | + | chr4.3:37316107-37316126 | MS.gene54568:intron | 35.0% |
| ! | TCTTTTATCAAGCCAAACCA+AGG | + | chr4.3:37315190-37315209 | MS.gene54568:CDS | 35.0% |
| !! | TCTGAAGCTGATTTTGTTAG+TGG | + | chr4.3:37316098-37316117 | MS.gene54568:intron | 35.0% |
| !!! | AAACAGGTCCGTTTTAAGTT+TGG | + | chr4.3:37316228-37316247 | MS.gene54568:intron | 35.0% |
| !!! | TCTTCTCCTTGGTTTGTTTT+GGG | + | chr4.3:37312944-37312963 | MS.gene54568:CDS | 35.0% |
| !!! | TTCTTCTCCTTGGTTTGTTT+TGG | + | chr4.3:37312943-37312962 | MS.gene54568:CDS | 35.0% |
| AACAAACCAAGGAGAAGAAG+AGG | - | chr4.3:37312942-37312961 | None:intergenic | 40.0% | |
| AACGTAGACATGAACTGGTT+GGG | - | chr4.3:37313068-37313087 | None:intergenic | 40.0% | |
| AACTGATTAGGTCACTGTCT+AGG | + | chr4.3:37314007-37314026 | MS.gene54568:intron | 40.0% | |
| AAGTGTGATATGATCAGCGT+TGG | + | chr4.3:37313911-37313930 | MS.gene54568:intron | 40.0% | |
| ACAAACCAAGGAGAAGAAGA+GGG | - | chr4.3:37312941-37312960 | None:intergenic | 40.0% | |
| ACACAATAACATGCAAGCTG+AGG | - | chr4.3:37315807-37315826 | None:intergenic | 40.0% | |
| ACACCTTAAGTCTACTAGTC+TGG | + | chr4.3:37314625-37314644 | MS.gene54568:intron | 40.0% | |
| ACACGAATAGTTGACAAGGT+TGG | - | chr4.3:37315027-37315046 | None:intergenic | 40.0% | |
| ACACTGGCACTTCAGATTAA+AGG | + | chr4.3:37317031-37317050 | MS.gene54568:intron | 40.0% | |
| ACCATGAGCTTCTATTTACG+GGG | + | chr4.3:37314057-37314076 | MS.gene54568:intron | 40.0% | |
| AGAATCAGTTACAGCCTTAC+AGG | + | chr4.3:37316758-37316777 | MS.gene54568:intron | 40.0% | |
| AGACTAGTAGACTTAAGGTG+TGG | - | chr4.3:37314626-37314645 | None:intergenic | 40.0% | |
| AGGAACGATTATCTGCATTC+AGG | - | chr4.3:37313621-37313640 | None:intergenic | 40.0% | |
| ATAGCTTAACACCACCTGTA+AGG | - | chr4.3:37316775-37316794 | None:intergenic | 40.0% | |
| ATCCCAGACTAGTAGACTTA+AGG | - | chr4.3:37314631-37314650 | None:intergenic | 40.0% | |
| ATTGCTAGAGTGAGGAAATG+TGG | + | chr4.3:37313795-37313814 | MS.gene54568:intron | 40.0% | |
| ATTGCTGCAATAATGCAACC+TGG | + | chr4.3:37316501-37316520 | MS.gene54568:intron | 40.0% | |
| CAACTTCCCAAAACAAACCA+AGG | - | chr4.3:37312953-37312972 | None:intergenic | 40.0% | |
| CATCCGATCAAGACTAATAG+AGG | - | chr4.3:37316831-37316850 | None:intergenic | 40.0% | |
| CGTTCAACTCCAACAAAGAT+CGG | - | chr4.3:37314090-37314109 | None:intergenic | 40.0% | |
| CTTTAACAGAGGAAAGAACC+AGG | + | chr4.3:37316533-37316552 | MS.gene54568:intron | 40.0% | |
| GACTTTGTGGATTTGGAAAC+TGG | - | chr4.3:37317629-37317648 | None:intergenic | 40.0% | |
| GAGTATCTACACATATCCCT+TGG | - | chr4.3:37316158-37316177 | None:intergenic | 40.0% | |
| GAGTGAGGAAATGTGGTTTA+CGG | + | chr4.3:37313802-37313821 | MS.gene54568:intron | 40.0% | |
| GATACCTACACCTACACATT+TGG | + | chr4.3:37317062-37317081 | MS.gene54568:intron | 40.0% | |
| GCTACAATGACACGTAAACA+TGG | - | chr4.3:37317124-37317143 | None:intergenic | 40.0% | |
| GGAACGATTATCTGCATTCA+GGG | - | chr4.3:37313620-37313639 | None:intergenic | 40.0% | |
| GTAACCAAATGTGTAGGTGT+AGG | - | chr4.3:37317069-37317088 | None:intergenic | 40.0% | |
| GTTACCCTAAGTAGAAGTTC+AGG | + | chr4.3:37313863-37313882 | MS.gene54568:intron | 40.0% | |
| GTTTCCAAATCCACAAAGTC+TGG | + | chr4.3:37317629-37317648 | MS.gene54568:CDS | 40.0% | |
| TTCCTTGTGTTGAGTCTCAT+CGG | - | chr4.3:37317421-37317440 | None:intergenic | 40.0% | |
| TTCTCGTATAAAACCCAACC+TGG | - | chr4.3:37315905-37315924 | None:intergenic | 40.0% | |
| TTGCATGGAACAATGTCCAA+GGG | + | chr4.3:37316139-37316158 | MS.gene54568:CDS | 40.0% | |
| TTGCTGCAATAATGCAACCT+GGG | + | chr4.3:37316502-37316521 | MS.gene54568:intron | 40.0% | |
| TTTAGGCAATTGCTAGAGTG+AGG | + | chr4.3:37313787-37313806 | MS.gene54568:intron | 40.0% | |
| ! | ATTCGCAAAATGAGGTGTTC+TGG | + | chr4.3:37314720-37314739 | MS.gene54568:CDS | 40.0% |
| ! | CACCTTAAGTCTACTAGTCT+GGG | + | chr4.3:37314626-37314645 | MS.gene54568:intron | 40.0% |
| ! | CTTCAGATTAAAGGCGTGTT+TGG | + | chr4.3:37317040-37317059 | MS.gene54568:intron | 40.0% |
| ! | GAAGCTAGGTTAGCTAACTA+TGG | - | chr4.3:37316805-37316824 | None:intergenic | 40.0% |
| ! | TAGGTTAGCTAACTATGGTC+TGG | - | chr4.3:37316800-37316819 | None:intergenic | 40.0% |
| !! | TGTGATAGTGGTGATTCCTT+TGG | - | chr4.3:37313107-37313126 | None:intergenic | 40.0% |
| !! | TTGAGGGTATTCGCAAAATG+AGG | + | chr4.3:37314712-37314731 | MS.gene54568:CDS | 40.0% |
| !! | TTTCTGGCTTCTGTACATAG+CGG | + | chr4.3:37315277-37315296 | MS.gene54568:intron | 40.0% |
| !!! | CTTGGTTTGTTTTGGGAAGT+TGG | + | chr4.3:37312951-37312970 | MS.gene54568:CDS | 40.0% |
| !!! | TAAGCAGATCGTTTTGGAGA+AGG | - | chr4.3:37315632-37315651 | None:intergenic | 40.0% |
| AATCGTACAGTCAGCGTGTT+TGG | - | chr4.3:37313596-37313615 | None:intergenic | 45.0% | |
| ACTATGGGATGTGAGAAAGC+TGG | + | chr4.3:37314759-37314778 | MS.gene54568:CDS | 45.0% | |
| ACTGCAATTGTGGCTTCCAA+GGG | + | chr4.3:37317278-37317297 | MS.gene54568:CDS | 45.0% | |
| AGATTCCTTGAAGTTGGGAC+TGG | - | chr4.3:37316937-37316956 | None:intergenic | 45.0% | |
| AGGACCCTGAACTTCTACTT+AGG | - | chr4.3:37313871-37313890 | None:intergenic | 45.0% | |
| AGGTCCTAAGATGGCTCATT+TGG | + | chr4.3:37316022-37316041 | MS.gene54568:CDS | 45.0% | |
| AGTACAGCATGCTTGTGTGT+TGG | + | chr4.3:37314441-37314460 | MS.gene54568:intron | 45.0% | |
| AGTCACTGCTAATGTGCAAC+TGG | - | chr4.3:37316694-37316713 | None:intergenic | 45.0% | |
| AGTGACACTCTTGTCTCTTC+AGG | - | chr4.3:37317261-37317280 | None:intergenic | 45.0% | |
| AGTTAAATCACCTGCACGCT+GGG | + | chr4.3:37314680-37314699 | MS.gene54568:intron | 45.0% | |
| ATACAGGGTCAAACCTTAGG+AGG | - | chr4.3:37314795-37314814 | None:intergenic | 45.0% | |
| ATACTACATTCTCCACAGCG+AGG | - | chr4.3:37317560-37317579 | None:intergenic | 45.0% | |
| ATCAGTTACAGCCTTACAGG+TGG | + | chr4.3:37316761-37316780 | MS.gene54568:intron | 45.0% | |
| ATTGGATCCCATTCTTCCCT+TGG | - | chr4.3:37317297-37317316 | None:intergenic | 45.0% | |
| CACCAGCATCAAGATGCTAT+GGG | - | chr4.3:37316301-37316320 | None:intergenic | 45.0% | |
| CCAAATCCACAAAGTCTGGA+AGG | + | chr4.3:37317633-37317652 | MS.gene54568:CDS | 45.0% | |
| CCTTCCAGACTTTGTGGATT+TGG | - | chr4.3:37317636-37317655 | None:intergenic | 45.0% | |
| CGTACCAAATGAGCCATCTT+AGG | - | chr4.3:37316029-37316048 | None:intergenic | 45.0% | |
| CTACTACAACTTCCAGGCAT+AGG | + | chr4.3:37316002-37316021 | MS.gene54568:CDS | 45.0% | |
| CTGTTAAAGATGGACAACCC+AGG | - | chr4.3:37316522-37316541 | None:intergenic | 45.0% | |
| CTTACAAAGTGGTCTGTGAC+TGG | + | chr4.3:37316661-37316680 | MS.gene54568:intron | 45.0% | |
| CTTCGAACGTAGACATGAAC+TGG | - | chr4.3:37313073-37313092 | None:intergenic | 45.0% | |
| CTTGTTCCTTCCAGACTTTG+TGG | - | chr4.3:37317642-37317661 | None:intergenic | 45.0% | |
| GAACGTAGACATGAACTGGT+TGG | - | chr4.3:37313069-37313088 | None:intergenic | 45.0% | |
| GAAGCAACCTCACTTTCAGT+TGG | - | chr4.3:37313706-37313725 | None:intergenic | 45.0% | |
| GAGCAACTACTACAACTTCC+AGG | + | chr4.3:37315996-37316015 | MS.gene54568:CDS | 45.0% | |
| GATTCCTTGAAGTTGGGACT+GGG | - | chr4.3:37316936-37316955 | None:intergenic | 45.0% | |
| GGACCCTGAACTTCTACTTA+GGG | - | chr4.3:37313870-37313889 | None:intergenic | 45.0% | |
| GGGTTGTCCATCTTTAACAG+AGG | + | chr4.3:37316522-37316541 | MS.gene54568:intron | 45.0% | |
| GTGTTTCATATGGCCTACAG+TGG | - | chr4.3:37314129-37314148 | None:intergenic | 45.0% | |
| GTTGCATGGAACAATGTCCA+AGG | + | chr4.3:37316138-37316157 | MS.gene54568:CDS | 45.0% | |
| TAGACATGAACTGGTTGGGA+AGG | - | chr4.3:37313064-37313083 | None:intergenic | 45.0% | |
| TAGTTAAATCACCTGCACGC+TGG | + | chr4.3:37314679-37314698 | MS.gene54568:intron | 45.0% | |
| TCCCCGTAAATAGAAGCTCA+TGG | - | chr4.3:37314061-37314080 | None:intergenic | 45.0% | |
| TGAGGAAATGTGGTTTACGG+CGG | + | chr4.3:37313805-37313824 | MS.gene54568:intron | 45.0% | |
| TGTGACTCCAACTGAAAGTG+AGG | + | chr4.3:37313696-37313715 | MS.gene54568:CDS | 45.0% | |
| TTCATATGGCCTACAGTGGA+CGG | - | chr4.3:37314125-37314144 | None:intergenic | 45.0% | |
| TTCCCATAGCATCTTGATGC+TGG | + | chr4.3:37316296-37316315 | MS.gene54568:intron | 45.0% | |
| ! | CAGGAGTAAGCAGATCGTTT+TGG | - | chr4.3:37315638-37315657 | None:intergenic | 45.0% |
| ! | CTAGGTTGGGTGTCAAGATT+GGG | + | chr4.3:37316201-37316220 | MS.gene54568:CDS | 45.0% |
| !! | CAAGAGTGTCACTGCAATTG+TGG | + | chr4.3:37317268-37317287 | MS.gene54568:CDS | 45.0% |
| !! | GGAAAGAAGATTTGCTGTCC+TGG | + | chr4.3:37315160-37315179 | MS.gene54568:intron | 45.0% |
| !! | GGGTGAGGAAGTGTTTCATA+TGG | - | chr4.3:37314139-37314158 | None:intergenic | 45.0% |
| !!! | CAGGTCCGTTTTAAGTTTGG+TGG | + | chr4.3:37316231-37316250 | MS.gene54568:intron | 45.0% |
| AACCTAGCCGGTTGCAAATG+CGG | - | chr4.3:37316188-37316207 | None:intergenic | 50.0% | |
| ACCAAGGAGAAGAAGAGGGA+AGG | - | chr4.3:37312937-37312956 | None:intergenic | 50.0% | |
| AGATGCACCAGTGGACACTA+TGG | + | chr4.3:37314743-37314762 | MS.gene54568:CDS | 50.0% | |
| ATCTCCCAGTCCCAACTTCA+AGG | + | chr4.3:37316929-37316948 | MS.gene54568:intron | 50.0% | |
| ATCTTGACACCCAACCTAGC+CGG | - | chr4.3:37316200-37316219 | None:intergenic | 50.0% | |
| ATGTCCACCGCATTTGCAAC+CGG | + | chr4.3:37316178-37316197 | MS.gene54568:CDS | 50.0% | |
| ATTCACGCAGTCAGCGTGTT+TGG | + | chr4.3:37313557-37313576 | MS.gene54568:intron | 50.0% | |
| CACCGATGAGACTCAACACA+AGG | + | chr4.3:37317416-37317435 | MS.gene54568:intron | 50.0% | |
| CACTGCAATTGTGGCTTCCA+AGG | + | chr4.3:37317277-37317296 | MS.gene54568:CDS | 50.0% | |
| CATTTGCAACCGGCTAGGTT+GGG | + | chr4.3:37316188-37316207 | MS.gene54568:CDS | 50.0% | |
| GATGCACCAGTGGACACTAT+GGG | + | chr4.3:37314744-37314763 | MS.gene54568:CDS | 50.0% | |
| GCACATTAGCAGTGACTGAC+TGG | + | chr4.3:37316697-37316716 | MS.gene54568:intron | 50.0% | |
| GCACCAGCATCAAGATGCTA+TGG | - | chr4.3:37316302-37316321 | None:intergenic | 50.0% | |
| GGAGTGACACCGATCTTTGT+TGG | + | chr4.3:37314078-37314097 | MS.gene54568:intron | 50.0% | |
| GTCAAGATTGGGCACGAAAC+AGG | + | chr4.3:37316212-37316231 | MS.gene54568:CDS | 50.0% | |
| GTGGCTTCCAAGGGAAGAAT+GGG | + | chr4.3:37317287-37317306 | MS.gene54568:CDS | 50.0% | |
| TCACATCCCATAGTGTCCAC+TGG | - | chr4.3:37314753-37314772 | None:intergenic | 50.0% | |
| TCCAGGCATAGGTCCTAAGA+TGG | + | chr4.3:37316013-37316032 | MS.gene54568:CDS | 50.0% | |
| TCCTTCCCTCTTCTTCTCCT+TGG | + | chr4.3:37312933-37312952 | MS.gene54568:CDS | 50.0% | |
| TGCTAATGTGCAACTGGCAG+TGG | - | chr4.3:37316688-37316707 | None:intergenic | 50.0% | |
| TGTGGCTTCCAAGGGAAGAA+TGG | + | chr4.3:37317286-37317305 | MS.gene54568:CDS | 50.0% | |
| ! | CAGCGTGTTTGGAACACTGA+TGG | - | chr4.3:37313585-37313604 | None:intergenic | 50.0% |
| ! | GCTAGGTTGGGTGTCAAGAT+TGG | + | chr4.3:37316200-37316219 | MS.gene54568:CDS | 50.0% |
| ! | TGGTTCTACGCTACCTCCTA+AGG | + | chr4.3:37314779-37314798 | MS.gene54568:CDS | 50.0% |
| ! | TTGGTAAGTGGCTTGGACAC+TGG | + | chr4.3:37317015-37317034 | MS.gene54568:intron | 50.0% |
| !!! | CAATGGTGGCTTTTAGGGTG+AGG | - | chr4.3:37314154-37314173 | None:intergenic | 50.0% |
| !!! | GATCGTTTTGGAGAAGGCGT+TGG | - | chr4.3:37315626-37315645 | None:intergenic | 50.0% |
| CTTGTGTCCATCCGCGTTCA+AGG | + | chr4.3:37317586-37317605 | MS.gene54568:CDS | 55.0% | |
| GCATTTGCAACCGGCTAGGT+TGG | + | chr4.3:37316187-37316206 | MS.gene54568:CDS | 55.0% | |
| GCCATCTTAGGACCTATGCC+TGG | - | chr4.3:37316017-37316036 | None:intergenic | 55.0% | |
| GGAAACTGGGCTTGAACCTG+CGG | - | chr4.3:37317615-37317634 | None:intergenic | 55.0% | |
| GTCGGAGGGTTTGATGGAAG+CGG | - | chr4.3:37313017-37313036 | None:intergenic | 55.0% | |
| TCTCCACAGCGAGGTCTTAG+AGG | - | chr4.3:37317551-37317570 | None:intergenic | 55.0% | |
| !! | ACACCTCTAAGACCTCGCTG+TGG | + | chr4.3:37317545-37317564 | MS.gene54568:CDS | 55.0% |
| !! | GTGTTCTGGAGATGCACCAG+TGG | + | chr4.3:37314734-37314753 | MS.gene54568:CDS | 55.0% |
| ACCTGCGGCTTCCTTGAACG+CGG | - | chr4.3:37317600-37317619 | None:intergenic | 60.0% | |
| ACGCTGGGAAGAGACGCTTG+AGG | + | chr4.3:37314695-37314714 | MS.gene54568:CDS | 60.0% | |
| CACCGCATTTGCAACCGGCT+AGG | + | chr4.3:37316183-37316202 | MS.gene54568:CDS | 60.0% | |
| CGCTGGGAAGAGACGCTTGA+GGG | + | chr4.3:37314696-37314715 | MS.gene54568:CDS | 60.0% | |
| CTAGCCGGTTGCAAATGCGG+TGG | - | chr4.3:37316185-37316204 | None:intergenic | 60.0% | |
| GTCGGAGTCGGAGGGTTTGA+TGG | - | chr4.3:37313023-37313042 | None:intergenic | 60.0% | |
| TGGTTGGGAAGGTGAAGCGC+CGG | - | chr4.3:37313053-37313072 | None:intergenic | 60.0% | |
| !! | AAGGTGAAGCGCCGGATGTG+GGG | - | chr4.3:37313045-37313064 | None:intergenic | 60.0% |
| !! | GAAGGTGAAGCGCCGGATGT+GGG | - | chr4.3:37313046-37313065 | None:intergenic | 60.0% |
| AGCGTCTCTTCCCAGCGTGC+AGG | - | chr4.3:37314693-37314712 | None:intergenic | 65.0% | |
| GATGTGGGGTCGGAGTCGGA+GGG | - | chr4.3:37313031-37313050 | None:intergenic | 65.0% | |
| GCGGCTTCCTTGAACGCGGA+TGG | - | chr4.3:37317596-37317615 | None:intergenic | 65.0% | |
| TCCGACTCCGACCCCACATC+CGG | + | chr4.3:37313031-37313050 | MS.gene54568:CDS | 65.0% | |
| TCCGCGTTCAAGGAAGCCGC+AGG | + | chr4.3:37317596-37317615 | MS.gene54568:CDS | 65.0% | |
| !! | GGAAGGTGAAGCGCCGGATG+TGG | - | chr4.3:37313047-37313066 | None:intergenic | 65.0% |
| !! | TGAAGCGCCGGATGTGGGGT+CGG | - | chr4.3:37313041-37313060 | None:intergenic | 65.0% |
| GCCGGATGTGGGGTCGGAGT+CGG | - | chr4.3:37313035-37313054 | None:intergenic | 70.0% | |
| GGATGTGGGGTCGGAGTCGG+AGG | - | chr4.3:37313032-37313051 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 37312926 | 37317670 | 37312926 | ID=MS.gene54568 |
| chr4.3 | mRNA | 37312926 | 37317670 | 37312926 | ID=MS.gene54568.t1;Parent=MS.gene54568 |
| chr4.3 | exon | 37312926 | 37313171 | 37312926 | ID=MS.gene54568.t1.exon1;Parent=MS.gene54568.t1 |
| chr4.3 | CDS | 37312926 | 37313171 | 37312926 | ID=cds.MS.gene54568.t1;Parent=MS.gene54568.t1 |
| chr4.3 | exon | 37313450 | 37313513 | 37313450 | ID=MS.gene54568.t1.exon2;Parent=MS.gene54568.t1 |
| chr4.3 | CDS | 37313450 | 37313513 | 37313450 | ID=cds.MS.gene54568.t1;Parent=MS.gene54568.t1 |
| chr4.3 | exon | 37313674 | 37313739 | 37313674 | ID=MS.gene54568.t1.exon3;Parent=MS.gene54568.t1 |
| chr4.3 | CDS | 37313674 | 37313739 | 37313674 | ID=cds.MS.gene54568.t1;Parent=MS.gene54568.t1 |
| chr4.3 | exon | 37314682 | 37314800 | 37314682 | ID=MS.gene54568.t1.exon4;Parent=MS.gene54568.t1 |
| chr4.3 | CDS | 37314682 | 37314800 | 37314682 | ID=cds.MS.gene54568.t1;Parent=MS.gene54568.t1 |
| chr4.3 | exon | 37315161 | 37315227 | 37315161 | ID=MS.gene54568.t1.exon5;Parent=MS.gene54568.t1 |
| chr4.3 | CDS | 37315161 | 37315227 | 37315161 | ID=cds.MS.gene54568.t1;Parent=MS.gene54568.t1 |
| chr4.3 | exon | 37315616 | 37315707 | 37315616 | ID=MS.gene54568.t1.exon6;Parent=MS.gene54568.t1 |
| chr4.3 | CDS | 37315616 | 37315707 | 37315616 | ID=cds.MS.gene54568.t1;Parent=MS.gene54568.t1 |
| chr4.3 | exon | 37315906 | 37316043 | 37315906 | ID=MS.gene54568.t1.exon7;Parent=MS.gene54568.t1 |
| chr4.3 | CDS | 37315906 | 37316043 | 37315906 | ID=cds.MS.gene54568.t1;Parent=MS.gene54568.t1 |
| chr4.3 | exon | 37316129 | 37316233 | 37316129 | ID=MS.gene54568.t1.exon8;Parent=MS.gene54568.t1 |
| chr4.3 | CDS | 37316129 | 37316233 | 37316129 | ID=cds.MS.gene54568.t1;Parent=MS.gene54568.t1 |
| chr4.3 | exon | 37317246 | 37317329 | 37317246 | ID=MS.gene54568.t1.exon9;Parent=MS.gene54568.t1 |
| chr4.3 | CDS | 37317246 | 37317329 | 37317246 | ID=cds.MS.gene54568.t1;Parent=MS.gene54568.t1 |
| chr4.3 | exon | 37317521 | 37317670 | 37317521 | ID=MS.gene54568.t1.exon10;Parent=MS.gene54568.t1 |
| chr4.3 | CDS | 37317521 | 37317670 | 37317521 | ID=cds.MS.gene54568.t1;Parent=MS.gene54568.t1 |
| Gene Sequence |
| Protein sequence |
