AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29725

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29725.t1 MTR_5g083860 98.742 318 4 0 1 318 8 325 0.0 645
MS.gene29725.t1 MTR_3g094670 80.192 313 61 1 6 318 11 322 2.09e-178 496
MS.gene29725.t1 MTR_3g094650 75.080 313 77 1 6 318 11 322 1.17e-169 474
MS.gene29725.t1 MTR_3g094630 77.316 313 70 1 6 318 11 322 2.03e-167 468
MS.gene29725.t1 MTR_3g466200 68.608 309 96 1 11 318 12 320 1.59e-158 446
MS.gene29725.t1 MTR_5g074970 63.492 315 113 2 6 318 12 326 1.27e-144 410
MS.gene29725.t1 MTR_2g084080 61.783 314 117 2 5 318 7 317 3.11e-138 394
MS.gene29725.t1 MTR_3g072190 61.875 320 118 2 1 318 1 318 3.42e-137 391
MS.gene29725.t1 MTR_2g084110 59.810 316 124 2 3 318 5 317 2.06e-134 384
MS.gene29725.t1 MTR_7g072510 59.609 307 122 1 12 318 8 312 1.35e-133 382
MS.gene29725.t1 MTR_2g084020 60.635 315 120 4 5 318 7 318 2.58e-133 382
MS.gene29725.t1 MTR_2g084090 59.494 316 126 2 3 318 5 318 2.99e-132 379
MS.gene29725.t1 MTR_2g084010 59.365 315 124 3 5 318 7 318 1.47e-131 377
MS.gene29725.t1 MTR_4g083710 58.255 321 131 3 1 318 4 324 1.48e-129 372
MS.gene29725.t1 MTR_7g072480 59.091 308 124 1 11 318 11 316 1.99e-129 372
MS.gene29725.t1 MTR_3g466180 60.317 315 122 2 4 318 12 323 4.78e-127 366
MS.gene29725.t1 MTR_2g084000 56.825 315 133 3 5 318 7 319 6.46e-127 365
MS.gene29725.t1 MTR_5g074860 58.438 320 124 6 4 317 8 324 7.54e-125 360
MS.gene29725.t1 MTR_4g029170 57.188 313 129 4 9 318 11 321 1.01e-123 357
MS.gene29725.t1 MTR_4g074995 58.013 312 113 5 10 318 12 308 4.95e-121 350
MS.gene29725.t1 MTR_5g074710 55.864 324 134 6 1 318 1 321 2.77e-119 346
MS.gene29725.t1 MTR_4g029180 58.163 294 119 3 27 318 30 321 3.67e-119 346
MS.gene29725.t1 MTR_4g074990 56.410 312 117 4 9 318 11 305 2.57e-118 343
MS.gene29725.t1 MTR_4g029200 52.366 317 148 2 3 318 24 338 6.88e-117 340
MS.gene29725.t1 MTR_5g074760 54.938 324 137 6 1 318 1 321 7.01e-117 340
MS.gene29725.t1 MTR_5g074740 54.630 324 138 6 1 318 1 321 5.22e-115 335
MS.gene29725.t1 MTR_4g029190 53.952 291 134 0 28 318 50 340 3.93e-114 333
MS.gene29725.t1 MTR_7g026990 52.632 323 145 5 1 318 3 322 6.56e-114 332
MS.gene29725.t1 MTR_1g115900 54.808 312 134 5 11 318 13 321 9.04e-113 330
MS.gene29725.t1 MTR_3g072190 63.095 252 91 1 67 318 2 251 5.56e-111 322
MS.gene29725.t1 MTR_5g021060 52.475 303 134 3 24 318 30 330 3.19e-110 323
MS.gene29725.t1 MTR_3g467600 53.289 304 135 4 20 318 23 324 1.47e-107 316
MS.gene29725.t1 MTR_4g074980 54.221 308 114 4 12 318 13 294 6.78e-106 311
MS.gene29725.t1 MTR_8g076820 52.475 303 134 3 24 318 30 330 1.09e-105 312
MS.gene29725.t1 MTR_4g122640 47.904 334 158 3 1 318 3 336 5.72e-105 310
MS.gene29725.t1 MTR_2g040000 50.613 326 142 6 8 318 10 331 1.35e-103 306
MS.gene29725.t1 MTR_7g093370 48.125 320 154 5 9 318 54 371 7.79e-103 306
MS.gene29725.t1 MTR_5g017850 48.287 321 155 4 5 318 10 326 7.78e-101 299
MS.gene29725.t1 MTR_4g125940 51.125 311 137 5 19 318 23 329 2.07e-100 298
MS.gene29725.t1 MTR_5g017860 49.671 304 144 3 22 318 25 326 3.57e-100 298
MS.gene29725.t1 MTR_1g054205 48.148 324 151 6 6 318 9 326 1.06e-99 296
MS.gene29725.t1 MTR_5g014100 51.299 308 135 3 24 318 26 331 1.07e-99 296
MS.gene29725.t1 MTR_4g074980 60.166 241 94 2 12 250 13 253 8.97e-99 291
MS.gene29725.t1 MTR_1g022970 49.013 304 144 3 24 318 46 347 7.74e-97 290
MS.gene29725.t1 MTR_5g074860 50.000 320 112 8 4 317 8 285 5.25e-95 283
MS.gene29725.t1 MTR_5g049280 44.479 326 169 4 4 318 13 337 2.65e-94 283
MS.gene29725.t1 MTR_2g029800 47.649 319 152 4 13 318 14 330 3.00e-94 283
MS.gene29725.t1 MTR_2g029750 48.544 309 148 4 19 318 24 330 4.16e-94 283
MS.gene29725.t1 MTR_2g029860 47.205 322 156 4 9 318 11 330 6.57e-94 283
MS.gene29725.t1 MTR_2g029560 46.130 323 161 5 5 318 7 325 1.29e-93 281
MS.gene29725.t1 MTR_2g029815 45.679 324 164 4 5 318 9 330 1.59e-92 279
MS.gene29725.t1 MTR_2g029730 45.820 323 164 3 5 318 6 326 1.32e-91 276
MS.gene29725.t1 MTR_2g029820 45.062 324 166 4 5 318 9 330 3.16e-91 276
MS.gene29725.t1 MTR_2g028980 45.872 327 166 4 1 318 6 330 4.57e-91 275
MS.gene29725.t1 MTR_4g125940 52.708 277 116 5 53 318 2 274 7.60e-91 272
MS.gene29725.t1 MTR_2g029830 45.631 309 157 3 19 318 23 329 7.36e-90 272
MS.gene29725.t1 MTR_4g031140 45.312 320 163 4 6 318 10 324 1.52e-89 271
MS.gene29725.t1 MTR_4g030890 45.484 310 157 4 16 318 92 396 3.62e-89 273
MS.gene29725.t1 MTR_2g029740 45.955 309 156 4 19 318 24 330 4.00e-89 270
MS.gene29725.t1 MTR_2g029910 42.320 319 170 4 13 318 15 332 3.96e-83 255
MS.gene29725.t1 MTR_2g029850 45.289 329 163 6 4 318 5 330 4.67e-83 255
MS.gene29725.t1 MTR_0155s0040 42.994 314 165 6 6 318 15 315 1.37e-82 252
MS.gene29725.t1 MTR_1g077000 42.767 318 171 6 5 318 17 327 4.18e-81 249
MS.gene29725.t1 MTR_3g092990 40.810 321 177 4 9 318 8 326 9.94e-79 243
MS.gene29725.t1 MTR_7g029030 40.938 320 180 5 5 318 4 320 1.99e-76 237
MS.gene29725.t1 MTR_4g046713 40.810 321 177 4 5 318 12 326 3.16e-76 236
MS.gene29725.t1 MTR_1g101830 41.250 320 171 7 7 318 12 322 1.03e-75 235
MS.gene29725.t1 MTR_1g025980 41.049 324 177 6 1 317 1 317 1.19e-75 235
MS.gene29725.t1 MTR_2g029830 46.512 258 127 3 70 318 6 261 2.55e-75 233
MS.gene29725.t1 MTR_2g008710 40.615 325 172 7 5 318 11 325 2.43e-74 232
MS.gene29725.t1 MTR_1g086320 39.091 330 189 3 1 318 4 333 3.15e-74 231
MS.gene29725.t1 MTR_4g114210 41.284 327 172 8 5 318 1 320 7.92e-74 230
MS.gene29725.t1 MTR_5g022870 40.373 322 176 7 5 318 3 316 1.92e-73 229
MS.gene29725.t1 MTR_1g038680 41.860 301 164 4 28 318 33 332 4.46e-72 226
MS.gene29725.t1 MTR_8g075100 41.254 303 163 6 23 318 25 319 3.53e-71 223
MS.gene29725.t1 MTR_2g088770 40.683 322 173 8 9 318 10 325 4.79e-71 223
MS.gene29725.t1 MTR_1g086490 38.166 338 188 5 1 318 4 340 6.94e-69 218
MS.gene29725.t1 MTR_1g009750 39.329 328 183 7 3 318 5 328 1.62e-68 217
MS.gene29725.t1 MTR_3g092990 38.941 321 172 5 9 318 8 315 2.00e-68 216
MS.gene29725.t1 MTR_7g107520 38.344 326 187 6 1 318 1 320 9.45e-68 214
MS.gene29725.t1 MTR_5g074700 50.661 227 94 6 95 318 3 214 5.86e-67 209
MS.gene29725.t1 MTR_3g072210 57.219 187 76 3 134 318 54 238 1.52e-66 209
MS.gene29725.t1 MTR_4g133800 39.130 299 164 6 28 318 45 333 2.38e-66 211
MS.gene29725.t1 MTR_6g027440 37.342 316 188 5 5 318 7 314 1.68e-65 209
MS.gene29725.t1 MTR_4g087965 39.604 303 171 5 23 314 41 342 1.83e-65 209
MS.gene29725.t1 MTR_6g043460 36.890 328 190 6 2 318 7 328 1.84e-65 209
MS.gene29725.t1 MTR_2g437770 40.924 303 160 7 24 318 50 341 1.94e-65 209
MS.gene29725.t1 MTR_4g132490 34.628 309 196 2 15 318 20 327 4.79e-65 208
MS.gene29725.t1 MTR_7g086820 37.667 300 183 3 20 318 16 312 6.08e-65 207
MS.gene29725.t1 MTR_6g043280 39.799 299 169 5 24 318 41 332 5.73e-64 205
MS.gene29725.t1 MTR_5g016010 37.003 327 181 6 6 314 6 325 6.75e-64 205
MS.gene29725.t1 MTR_1g090760 35.404 322 196 5 7 318 11 330 9.40e-64 205
MS.gene29725.t1 MTR_2g008160 38.854 314 173 7 17 318 17 323 1.43e-63 204
MS.gene29725.t1 MTR_4g127670 38.111 307 171 6 24 318 24 323 2.09e-63 203
MS.gene29725.t1 MTR_2g077990 36.364 330 172 6 22 314 74 402 7.14e-63 205
MS.gene29725.t1 MTR_2g078610 36.061 330 173 6 22 314 74 402 8.57e-63 204
MS.gene29725.t1 MTR_7g086870 35.906 298 184 4 22 318 20 311 9.31e-63 201
MS.gene29725.t1 MTR_1g066710 36.213 301 186 4 22 318 25 323 1.90e-62 201
MS.gene29725.t1 MTR_2g099175 35.843 332 188 7 5 318 11 335 1.20e-61 199
MS.gene29725.t1 MTR_2g067440 35.045 331 178 6 22 317 58 386 2.95e-61 200
MS.gene29725.t1 MTR_4g095450 35.604 323 189 6 4 314 5 320 4.93e-61 197
MS.gene29725.t1 MTR_8g062780 36.909 317 193 4 9 318 8 324 5.65e-61 197
MS.gene29725.t1 MTR_0286s0010 34.277 318 191 5 13 318 23 334 1.70e-60 196
MS.gene29725.t1 MTR_6g008075 34.277 318 191 5 13 318 23 334 1.70e-60 196
MS.gene29725.t1 MTR_7g072490 45.868 242 75 2 70 311 2 187 1.08e-59 190
MS.gene29725.t1 MTR_1g066640 35.000 300 191 3 22 318 25 323 2.47e-59 193
MS.gene29725.t1 MTR_2g008730 44.672 244 120 5 86 318 62 301 3.94e-59 192
MS.gene29725.t1 MTR_1g066680 34.333 300 192 4 22 318 25 322 1.08e-58 191
MS.gene29725.t1 MTR_3g105790 35.474 327 194 4 2 318 3 322 2.34e-58 191
MS.gene29725.t1 MTR_1g066380 34.333 300 193 3 22 318 25 323 2.40e-58 191
MS.gene29725.t1 MTR_6g043240 36.242 298 179 6 24 318 42 331 5.53e-58 190
MS.gene29725.t1 MTR_1g009750 37.117 326 176 8 3 318 5 311 6.05e-58 189
MS.gene29725.t1 MTR_2g078280 35.625 320 168 6 22 304 74 392 7.04e-57 189
MS.gene29725.t1 MTR_4g132110 33.439 314 203 4 6 314 12 324 4.22e-56 185
MS.gene29725.t1 MTR_4g132110 32.915 319 203 5 6 314 12 329 6.66e-54 179
MS.gene29725.t1 MTR_2g008160 36.364 308 154 7 17 318 17 288 1.04e-52 175
MS.gene29725.t1 MTR_5g033470 34.700 317 185 7 18 318 67 377 1.57e-48 166
MS.gene29725.t1 MTR_0147s0010 31.579 323 180 6 21 317 74 381 1.28e-47 164
MS.gene29725.t1 MTR_3g072260 62.500 128 43 1 9 131 6 133 3.38e-47 156
MS.gene29725.t1 MTR_1g066380 33.858 254 164 3 68 318 3 255 3.95e-46 157
MS.gene29725.t1 MTR_2g067450 32.903 310 185 8 22 317 9 309 2.23e-45 156
MS.gene29725.t1 MTR_2g008160 44.068 177 95 3 17 193 17 189 1.76e-41 143
MS.gene29725.t1 MTR_3g105790 35.685 241 144 2 87 318 8 246 1.17e-39 140
MS.gene29725.t1 MTR_2g029880 40.104 192 94 4 136 318 9 188 1.63e-36 130
MS.gene29725.t1 MTR_5g074770 53.333 90 39 2 230 317 20 108 6.14e-26 99.8
MS.gene29725.t1 MTR_2g077980 30.496 282 140 9 86 318 11 285 1.30e-25 103
MS.gene29725.t1 MTR_2g078560 30.180 222 119 4 129 314 95 316 2.41e-24 101
MS.gene29725.t1 MTR_4g031040 37.500 168 66 4 85 252 3 131 5.96e-23 92.8
MS.gene29725.t1 MTR_3g462850 38.028 142 76 4 188 318 9 149 5.98e-22 90.5
MS.gene29725.t1 MTR_5g058120 34.395 157 93 3 160 314 7 155 2.87e-21 91.3
MS.gene29725.t1 MTR_7g086790 40.000 120 68 2 71 190 17 132 3.24e-21 89.7
MS.gene29725.t1 MTR_4g114220 39.098 133 57 4 41 165 20 136 3.81e-20 85.5
MS.gene29725.t1 MTR_6g048160 56.944 72 27 2 63 134 22 89 1.47e-19 82.4
MS.gene29725.t1 MTR_1g089005 38.971 136 72 3 6 135 1 131 3.40e-18 80.5
MS.gene29725.t1 MTR_3g107060 26.619 278 135 9 35 297 87 310 1.93e-16 79.0
MS.gene29725.t1 MTR_1g098320 44.737 76 42 0 239 314 45 120 4.72e-16 74.3
MS.gene29725.t1 MTR_2g029930 35.652 115 42 4 11 107 2 102 2.57e-14 68.6
MS.gene29725.t1 MTR_7g107500 41.667 84 48 1 235 318 15 97 3.48e-13 65.1
MS.gene29725.t1 MTR_3g088160 25.856 263 146 8 58 300 121 354 5.94e-13 69.3
MS.gene29725.t1 MTR_3g088160 25.856 263 146 8 58 300 121 354 5.97e-13 69.3
MS.gene29725.t1 MTR_7g086810 31.967 122 57 1 20 141 2 97 2.46e-12 65.9
MS.gene29725.t1 MTR_7g086785 38.889 72 43 1 70 141 4 74 4.57e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29725.t1 AT5G05340 73.064 297 80 0 22 318 28 324 4.31e-163 457
MS.gene29725.t1 AT5G58400 65.806 310 104 2 11 318 16 325 8.61e-144 408
MS.gene29725.t1 AT5G58390 62.222 315 118 1 5 318 2 316 1.62e-137 392
MS.gene29725.t1 AT1G14550 56.190 315 129 5 11 318 9 321 2.54e-117 341
MS.gene29725.t1 AT1G14540 53.628 317 141 4 6 318 1 315 5.55e-114 332
MS.gene29725.t1 AT4G36430 52.188 320 142 4 7 318 14 330 2.06e-113 332
MS.gene29725.t1 AT2G18150 51.133 309 141 3 18 318 30 336 4.40e-110 323
MS.gene29725.t1 AT5G06720 48.457 324 154 4 6 318 12 333 2.46e-106 314
MS.gene29725.t1 AT2G18140 50.000 310 145 3 17 318 28 335 2.87e-106 313
MS.gene29725.t1 AT5G66390 49.689 322 151 4 6 318 14 333 1.04e-105 312
MS.gene29725.t1 AT1G44970 51.613 310 139 3 18 318 39 346 6.35e-104 308
MS.gene29725.t1 AT3G50990 50.974 308 141 4 19 318 36 341 1.21e-103 307
MS.gene29725.t1 AT5G06730 48.137 322 152 5 9 318 16 334 1.26e-102 305
MS.gene29725.t1 AT5G19890 50.154 325 141 7 5 318 13 327 3.93e-101 300
MS.gene29725.t1 AT4G16270 52.349 298 130 4 29 318 55 348 2.71e-100 299
MS.gene29725.t1 AT2G35380 48.788 330 149 4 7 318 8 335 8.72e-100 297
MS.gene29725.t1 AT1G68850 44.951 307 156 4 24 318 30 335 1.60e-97 291
MS.gene29725.t1 AT3G32980 47.401 327 157 5 3 318 12 334 1.29e-96 290
MS.gene29725.t1 AT4G08770 47.937 315 151 4 15 318 15 327 2.51e-96 288
MS.gene29725.t1 AT2G38380 47.152 316 155 5 13 318 20 333 6.05e-96 288
MS.gene29725.t1 AT2G38390 46.203 316 158 5 13 318 20 333 2.71e-95 286
MS.gene29725.t1 AT4G08780 46.815 314 154 4 16 318 16 327 4.11e-95 285
MS.gene29725.t1 AT1G49570 48.675 302 145 3 22 314 46 346 4.82e-94 283
MS.gene29725.t1 AT3G49120 46.462 325 160 5 5 318 14 335 2.53e-90 273
MS.gene29725.t1 AT3G49110 45.231 325 157 5 5 318 22 336 5.45e-90 273
MS.gene29725.t1 AT2G22420 43.077 325 170 5 1 318 3 319 6.21e-87 264
MS.gene29725.t1 AT5G19880 44.308 325 166 5 7 318 7 329 4.33e-86 262
MS.gene29725.t1 AT4G33420 44.932 296 155 5 24 318 37 325 5.95e-79 243
MS.gene29725.t1 AT4G33420 44.932 296 155 5 24 318 84 372 2.55e-78 243
MS.gene29725.t1 AT5G64120 40.549 328 173 8 5 318 9 328 4.48e-78 241
MS.gene29725.t1 AT3G01190 41.231 325 176 6 2 318 4 321 1.55e-77 240
MS.gene29725.t1 AT1G05240 40.864 301 163 5 24 314 26 321 3.95e-76 236
MS.gene29725.t1 AT1G05250 40.864 301 163 5 24 314 26 321 3.95e-76 236
MS.gene29725.t1 AT2G41480 42.462 325 167 8 7 318 11 328 8.28e-76 236
MS.gene29725.t1 AT5G51890 39.692 325 184 5 1 318 3 322 9.05e-76 235
MS.gene29725.t1 AT2G35380 50.407 246 107 3 86 318 4 247 1.94e-75 232
MS.gene29725.t1 AT5G42180 42.593 324 162 7 6 317 5 316 7.89e-75 233
MS.gene29725.t1 AT5G15180 40.000 325 176 7 8 318 10 329 1.48e-73 230
MS.gene29725.t1 AT5G17820 40.694 317 168 6 10 318 9 313 1.99e-72 226
MS.gene29725.t1 AT1G71695 40.468 299 171 4 24 318 44 339 2.29e-72 228
MS.gene29725.t1 AT5G17820 40.694 317 168 6 10 318 62 366 2.36e-71 225
MS.gene29725.t1 AT5G14130 37.267 322 190 4 5 318 13 330 2.50e-70 221
MS.gene29725.t1 AT3G03670 39.623 318 176 4 11 318 10 321 2.90e-70 221
MS.gene29725.t1 AT5G14130 37.267 322 190 4 5 318 54 371 8.61e-70 221
MS.gene29725.t1 AT5G39580 41.946 298 159 7 28 318 29 319 6.83e-69 218
MS.gene29725.t1 AT4G37530 38.994 318 172 5 16 318 19 329 1.07e-68 217
MS.gene29725.t1 AT5G40150 37.500 304 184 4 19 318 27 328 1.79e-68 217
MS.gene29725.t1 AT4G11290 39.564 321 178 7 11 318 9 326 1.91e-67 214
MS.gene29725.t1 AT1G05260 37.771 323 188 6 5 318 7 325 7.53e-67 213
MS.gene29725.t1 AT3G21770 38.361 305 175 6 19 314 24 324 2.21e-66 211
MS.gene29725.t1 AT5G67400 37.651 332 185 6 6 318 1 329 3.75e-66 211
MS.gene29725.t1 AT4G37520 37.500 312 173 5 22 318 25 329 7.32e-66 210
MS.gene29725.t1 AT3G49960 36.778 329 186 6 5 318 8 329 2.94e-65 208
MS.gene29725.t1 AT4G17690 38.796 299 179 3 23 318 25 322 3.49e-65 208
MS.gene29725.t1 AT4G31760 37.539 317 183 3 11 318 16 326 8.63e-65 207
MS.gene29725.t1 AT2G18980 37.812 320 181 6 10 318 11 323 1.61e-64 206
MS.gene29725.t1 AT3G28200 35.410 305 188 4 19 318 16 316 1.88e-64 206
MS.gene29725.t1 AT1G30870 39.344 305 165 6 24 318 51 345 3.14e-64 206
MS.gene29725.t1 AT4G33870 33.735 332 177 4 24 314 68 397 5.65e-64 207
MS.gene29725.t1 AT4G25980 36.875 320 182 7 12 318 14 326 6.75e-64 205
MS.gene29725.t1 AT4G30170 38.312 308 172 5 22 318 25 325 9.78e-64 204
MS.gene29725.t1 AT4G37520 37.179 312 171 6 22 318 25 326 1.32e-63 204
MS.gene29725.t1 AT5G47000 37.812 320 191 5 5 318 13 330 1.48e-63 204
MS.gene29725.t1 AT2G34060 41.368 307 166 7 21 315 39 343 1.69e-63 204
MS.gene29725.t1 AT1G77100 38.462 325 182 9 6 318 1 319 1.56e-62 201
MS.gene29725.t1 AT2G24800 38.235 306 175 3 22 318 29 329 2.43e-62 201
MS.gene29725.t1 AT5G64100 38.024 334 177 8 5 318 8 331 3.32e-62 201
MS.gene29725.t1 AT1G34510 37.624 303 180 6 17 318 15 309 6.47e-62 199
MS.gene29725.t1 AT5G64110 38.623 334 179 8 3 318 5 330 1.25e-61 199
MS.gene29725.t1 AT4G26010 37.874 301 178 5 19 318 17 309 1.16e-60 196
MS.gene29725.t1 AT4G26010 37.874 301 178 5 19 318 45 337 1.89e-60 196
MS.gene29725.t1 AT1G24110 35.185 324 197 5 6 318 1 322 7.41e-60 194
MS.gene29725.t1 AT4G21960 33.660 306 199 3 16 318 23 327 3.15e-58 191
MS.gene29725.t1 AT4G37530 40.449 267 137 5 16 267 19 278 3.46e-58 189
MS.gene29725.t1 AT2G43480 34.906 318 185 7 15 318 26 335 5.08e-58 190
MS.gene29725.t1 AT2G39040 38.730 315 175 8 18 318 40 350 5.09e-58 191
MS.gene29725.t1 AT2G37130 35.526 304 187 5 21 318 27 327 3.53e-57 187
MS.gene29725.t1 AT2G37130 35.570 298 183 5 27 318 2 296 3.10e-56 184
MS.gene29725.t1 AT5G24070 34.314 306 178 7 28 318 38 335 2.46e-55 183
MS.gene29725.t1 AT5G22410 35.220 318 184 11 12 316 15 323 5.02e-51 172
MS.gene29725.t1 AT3G17070 30.675 326 210 5 8 318 15 339 1.74e-46 160
MS.gene29725.t1 AT5G39580 39.234 209 118 4 28 236 29 228 1.12e-41 145
MS.gene29725.t1 AT4G25980 41.667 180 101 3 12 191 59 234 1.36e-39 140
MS.gene29725.t1 AT2G24800 43.452 168 91 1 22 189 29 192 1.43e-38 137
MS.gene29725.t1 AT3G17070 30.268 261 172 5 66 318 18 276 8.22e-33 122
MS.gene29725.t1 AT4G32320 28.058 278 131 8 35 297 96 319 1.36e-17 82.4
MS.gene29725.t1 AT3G42570 37.363 91 56 1 100 189 57 147 3.11e-13 66.6
MS.gene29725.t1 AT4G08390 27.317 205 120 6 105 300 176 360 2.60e-12 67.4
MS.gene29725.t1 AT4G08390 27.317 205 120 6 105 300 176 360 2.60e-12 67.4
MS.gene29725.t1 AT4G08390 27.317 205 120 6 105 300 176 360 2.60e-12 67.4
MS.gene29725.t1 AT4G08390 27.317 205 120 6 105 300 175 359 2.74e-12 67.4
MS.gene29725.t1 AT4G35970 25.984 254 131 9 58 300 33 240 2.27e-11 63.9
MS.gene29725.t1 AT4G35970 32.192 146 77 4 58 196 33 163 3.30e-11 62.4

Find 88 sgRNAs with CRISPR-Local

Find 133 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCGACCAACAACTCTTTAA+TGG 0.260720 5.3:+67965395 MS.gene29725:CDS
AGGTTCTGGGGACAATAATT+TGG 0.298176 5.3:+67965292 MS.gene29725:CDS
TTCACAGTGTCAAAGAGTTT+TGG 0.311726 5.3:-67963514 None:intergenic
GAGAGATAAGAAAGAATTGC+AGG 0.319158 5.3:+67965534 MS.gene29725:CDS
TGGACTTTCCACCAAGGATT+TGG 0.319515 5.3:+67964845 MS.gene29725:CDS
TGCCCCAAGACATCAGGTTC+TGG 0.322210 5.3:+67965278 MS.gene29725:CDS
TTGAGGCTTGAAGTGGGTGC+TGG 0.334026 5.3:-67964795 None:intergenic
CAAGTTTCACATCCCATGTT+GGG 0.349153 5.3:-67964722 None:intergenic
ATCTCAAGGTTTAATGCTCT+TGG 0.358777 5.3:+67964825 MS.gene29725:CDS
GTCCCCAGAACCTGATGTCT+TGG 0.382377 5.3:-67965282 None:intergenic
TTTGCTCGCACAAGGCAATC+AGG 0.386172 5.3:+67965254 MS.gene29725:CDS
AAGGATTTGGTCGCATTGTC+TGG 0.403525 5.3:+67964858 MS.gene29725:CDS
TGCCAATCCCAACAGAAATT+CGG 0.407832 5.3:+67964326 MS.gene29725:CDS
TCCCCAGAACCTGATGTCTT+GGG 0.408844 5.3:-67965281 None:intergenic
CATGCGGGTCTCCTTTGATA+TGG 0.427995 5.3:-67963554 None:intergenic
GAACTAGGTGGTCACACAAT+TGG 0.430778 5.3:+67965170 MS.gene29725:intron
AGCAGTGATGGTGAGGATAT+CGG 0.433737 5.3:-67964421 None:intergenic
ATCCACCATTAAAGAGTTGT+TGG 0.434063 5.3:-67965400 None:intergenic
TCTTATCTCTCCATTTGAAC+CGG 0.435627 5.3:-67965522 None:intergenic
GCCCCAAGACATCAGGTTCT+GGG 0.444687 5.3:+67965279 MS.gene29725:CDS
CCACGGGCCGAATTTCTGTT+GGG 0.448742 5.3:-67964333 None:intergenic
CCAAGTTTCACATCCCATGT+TGG 0.448886 5.3:-67964723 None:intergenic
TGAGGCTTGAAGTGGGTGCT+GGG 0.458400 5.3:-67964794 None:intergenic
GGCCGAATTTCTGTTGGGAT+TGG 0.459419 5.3:-67964328 None:intergenic
CAAGAACCTAGTTGACAGTA+AGG 0.467311 5.3:+67965361 MS.gene29725:CDS
AGTCCCCTCACCGGTTCAAA+TGG 0.471090 5.3:+67965512 MS.gene29725:CDS
CATTAAACCTTGAGATGAGT+TGG 0.479053 5.3:-67964818 None:intergenic
CTCTCCATTTGAACCGGTGA+GGG 0.479821 5.3:-67965516 None:intergenic
ATCTTTCGAAAGATTAGCAT+TGG 0.480051 5.3:-67963473 None:intergenic
GCTTAAATTTCCCAGCTTGG+AGG 0.480636 5.3:+67964699 MS.gene29725:intron
TCAGGGTGCCCCAAGACATC+AGG 0.480815 5.3:+67965272 MS.gene29725:CDS
ACGTTGGTGTTGCAAGATCA+AGG 0.493377 5.3:-67965319 None:intergenic
CCAACATGGGATGTGAAACT+TGG 0.494973 5.3:+67964723 MS.gene29725:CDS
TCCACGGGCCGAATTTCTGT+TGG 0.507509 5.3:-67964334 None:intergenic
ACCTTGAGATGAGTTGGTTG+AGG 0.512766 5.3:-67964812 None:intergenic
CCCAGCTTGGAGGCCCAACA+TGG 0.520178 5.3:+67964709 MS.gene29725:intron
AATGTCTCCCATCTTGATCA+TGG 0.525103 5.3:-67965489 None:intergenic
ATATTCGTGCACTATAGAAT+CGG 0.528157 5.3:-67965426 None:intergenic
GTCGATCACTTCGAATCCAC+GGG 0.532124 5.3:-67964349 None:intergenic
AGACAATGCGACCAAATCCT+TGG 0.535960 5.3:-67964856 None:intergenic
GATGACACATCAAGCTTCAC+CGG 0.536161 5.3:+67964294 MS.gene29725:CDS
AAACCATTGCAGGGATGTGA+TGG 0.540221 5.3:+67964258 MS.gene29725:intron
AATTGATACAAGAACCAAAA+GGG 0.548391 5.3:-67963443 None:intergenic
CGTCACCGCCATGATCAAGA+TGG 0.548522 5.3:+67965481 MS.gene29725:CDS
TAAAGAGTTGTTGGTCGGAG+TGG 0.549959 5.3:-67965391 None:intergenic
CCCCAGAACCTGATGTCTTG+GGG 0.554574 5.3:-67965280 None:intergenic
AACAGAGTCTCTAGCAGTGA+TGG 0.555738 5.3:-67964433 None:intergenic
TGTTGGAGTCGTTGTAAATG+TGG 0.559253 5.3:-67965220 None:intergenic
AGCAAAGGAAGTATCTATGT+TGG 0.559906 5.3:-67965237 None:intergenic
ATACTTCCTTTGCTCGCACA+AGG 0.564893 5.3:+67965246 MS.gene29725:CDS
CAGAAGAGAAGCACCCATGC+GGG 0.567182 5.3:-67963569 None:intergenic
CAATGCGACCAAATCCTTGG+TGG 0.568698 5.3:-67964853 None:intergenic
CTTGAAGTAATGATTGTCAA+AGG 0.570246 5.3:-67965342 None:intergenic
GCCTCAACCAACTCATCTCA+AGG 0.573068 5.3:+67964811 MS.gene29725:CDS
TGTCGATCACTTCGAATCCA+CGG 0.573405 5.3:-67964350 None:intergenic
CAATTGATACAAGAACCAAA+AGG 0.573924 5.3:-67963444 None:intergenic
TTGCTCGCACAAGGCAATCA+GGG 0.574883 5.3:+67965255 MS.gene29725:CDS
CGTTGGTGTTGCAAGATCAA+GGG 0.577092 5.3:-67965318 None:intergenic
ACCATTAAAGAGTTGTTGGT+CGG 0.578153 5.3:-67965396 None:intergenic
CATATCAAAGGAGACCCGCA+TGG 0.578197 5.3:+67963555 MS.gene29725:CDS
CCCAACAGAAATTCGGCCCG+TGG 0.584922 5.3:+67964333 MS.gene29725:CDS
TCGGCGCATGAAACTGCACC+TGG 0.584985 5.3:-67964402 None:intergenic
GTACATTAACAAAGCAATCG+TGG 0.586087 5.3:-67963603 None:intergenic
GAGTTGGTTGAGGCTTGAAG+TGG 0.587942 5.3:-67964802 None:intergenic
TGATTGCCTTGTGCGAGCAA+AGG 0.592651 5.3:-67965252 None:intergenic
GTCACCGCCATGATCAAGAT+GGG 0.592934 5.3:+67965482 MS.gene29725:CDS
AGTCTCTAGCAGTGATGGTG+AGG 0.603184 5.3:-67964428 None:intergenic
GCAGTGGAGAAAGTATGTCC+AGG 0.603574 5.3:+67964384 MS.gene29725:CDS
AGTTCAATCTGCCATATCAA+AGG 0.604429 5.3:+67963543 MS.gene29725:CDS
GTAGTCCCTTACTGTCAACT+AGG 0.605278 5.3:-67965367 None:intergenic
CCAGCTTGGAGGCCCAACAT+GGG 0.607919 5.3:+67964710 MS.gene29725:intron
GTCACACAATTGGACAAGCA+AGG 0.609025 5.3:+67965180 MS.gene29725:CDS
CGACAAAATCAAATCAGCAG+TGG 0.609985 5.3:+67964368 MS.gene29725:CDS
AGTAAATCAGCTGCAAACAA+TGG 0.614802 5.3:+67964768 MS.gene29725:CDS
AGTTGGTTGAGGCTTGAAGT+GGG 0.615516 5.3:-67964801 None:intergenic
GACCAACAACTCTTTAATGG+TGG 0.622816 5.3:+67965398 MS.gene29725:CDS
CCCCAAGACATCAGGTTCTG+GGG 0.624449 5.3:+67965280 MS.gene29725:CDS
TCTCTCCATTTGAACCGGTG+AGG 0.624609 5.3:-67965517 None:intergenic
GGAGACATTAGTCCCCTCAC+CGG 0.627716 5.3:+67965503 MS.gene29725:CDS
AAGAACCTAGTTGACAGTAA+GGG 0.631920 5.3:+67965362 MS.gene29725:CDS
TCTCCATTTGAACCGGTGAG+GGG 0.638254 5.3:-67965515 None:intergenic
ATATCAAAGGAGACCCGCAT+GGG 0.639894 5.3:+67963556 MS.gene29725:CDS
GTTGGAGTCGTTGTAAATGT+GGG 0.641309 5.3:-67965219 None:intergenic
TGCTCTTGGACTTTCCACCA+AGG 0.642254 5.3:+67964839 MS.gene29725:CDS
GTTGGTGTTGCAAGATCAAG+GGG 0.649121 5.3:-67965317 None:intergenic
TAATGATTGTCAAAGGACGT+TGG 0.654334 5.3:-67965335 None:intergenic
GCAGAAGAGAAGCACCCATG+CGG 0.697507 5.3:-67963570 None:intergenic
GTCTCCCATCTTGATCATGG+CGG 0.710146 5.3:-67965486 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAGTTAAAAGT+AGG - chr5.3:67963912-67963931 None:intergenic 10.0%
!! ATCATAATAAACATATTAAA+CGG + chr5.3:67964483-67964502 MS.gene29725:intron 10.0%
!!! ATTGAGATTTTAATAACTTT+AGG - chr5.3:67964557-67964576 None:intergenic 15.0%
!!! TATTTAACAATATTGACTTA+CGG + chr5.3:67963962-67963981 MS.gene29725:intron 15.0%
!!! TTTATTCTCTAAAATGTATA+GGG - chr5.3:67964540-67964559 None:intergenic 15.0%
!! AATAATAAATAAACCATTGC+AGG + chr5.3:67964248-67964267 MS.gene29725:intron 20.0%
!! AATAGAATAGATGTATATGT+GGG - chr5.3:67964904-67964923 None:intergenic 20.0%
!! AATCTCAATATAATACCTAA+TGG + chr5.3:67964568-67964587 MS.gene29725:intron 20.0%
!! ATAATAAATAAACCATTGCA+GGG + chr5.3:67964249-67964268 MS.gene29725:intron 20.0%
!! TAAGTCAATTTGTCAATAAT+TGG + chr5.3:67964927-67964946 MS.gene29725:intron 20.0%
!!! CTTTATTCTCTAAAATGTAT+AGG - chr5.3:67964541-67964560 None:intergenic 20.0%
!!! TGAGAAAGTATTATTTTCTA+TGG + chr5.3:67964195-67964214 MS.gene29725:intron 20.0%
!!! TTATTATGATGCAATTTTTG+TGG - chr5.3:67964473-67964492 None:intergenic 20.0%
!!! TTTTAAATGATACTTGAACT+AGG + chr5.3:67965155-67965174 MS.gene29725:intron 20.0%
! AATTGATACAAGAACCAAAA+GGG - chr5.3:67963446-67963465 None:intergenic 25.0%
! ACAACAATTATTTATAAGCG+TGG + chr5.3:67965082-67965101 MS.gene29725:intron 25.0%
! ATGGGTGGAAATTATTATTA+AGG + chr5.3:67965009-67965028 MS.gene29725:intron 25.0%
! CAATAGAATAGATGTATATG+TGG - chr5.3:67964905-67964924 None:intergenic 25.0%
! TCTCTTATAAATAAGATCGA+AGG - chr5.3:67963721-67963740 None:intergenic 25.0%
!! ATAGAATGATTTTCCACTAA+CGG + chr5.3:67963877-67963896 MS.gene29725:intron 25.0%
!!! AATGATTTGTTTTTCCCTTT+TGG + chr5.3:67963429-67963448 MS.gene29725:CDS 25.0%
!!! TTTTGGTTCTTGTATCAATT+GGG + chr5.3:67963446-67963465 MS.gene29725:CDS 25.0%
AAATCAGAAGAAAAAGAGCT+TGG - chr5.3:67965461-67965480 None:intergenic 30.0%
ATATTCGTGCACTATAGAAT+CGG - chr5.3:67965429-67965448 None:intergenic 30.0%
ATCTTTCGAAAGATTAGCAT+TGG - chr5.3:67963476-67963495 None:intergenic 30.0%
CAATTGATACAAGAACCAAA+AGG - chr5.3:67963447-67963466 None:intergenic 30.0%
CTTGAAGTAATGATTGTCAA+AGG - chr5.3:67965345-67965364 None:intergenic 30.0%
TAAATGATACTTGAACTAGG+TGG + chr5.3:67965158-67965177 MS.gene29725:intron 30.0%
TCCTTTATGTTTCATTGCTT+GGG + chr5.3:67965119-67965138 MS.gene29725:intron 30.0%
TTCCTTTATGTTTCATTGCT+TGG + chr5.3:67965118-67965137 MS.gene29725:intron 30.0%
TTTACATTGATCGTTCCATT+AGG - chr5.3:67964615-67964634 None:intergenic 30.0%
! CTATGGACTATACAATTCAT+TGG + chr5.3:67964212-67964231 MS.gene29725:intron 30.0%
! GAGAGAGAAATTGATAACAT+GGG + chr5.3:67964991-67965010 MS.gene29725:intron 30.0%
!!! CTTTTGGTTCTTGTATCAAT+TGG + chr5.3:67963445-67963464 MS.gene29725:CDS 30.0%
AAAAGCAAGTAGCATCAAAG+AGG - chr5.3:67964043-67964062 None:intergenic 35.0%
AAGAACCTAGTTGACAGTAA+GGG + chr5.3:67965362-67965381 MS.gene29725:CDS 35.0%
ACCATTAAAGAGTTGTTGGT+CGG - chr5.3:67965399-67965418 None:intergenic 35.0%
AGTAAATCAGCTGCAAACAA+TGG + chr5.3:67964768-67964787 MS.gene29725:CDS 35.0%
AGTTCAATCTGCCATATCAA+AGG + chr5.3:67963543-67963562 MS.gene29725:CDS 35.0%
ATCCACCATTAAAGAGTTGT+TGG - chr5.3:67965403-67965422 None:intergenic 35.0%
ATCTCAAGGTTTAATGCTCT+TGG + chr5.3:67964825-67964844 MS.gene29725:CDS 35.0%
CATTAAACCTTGAGATGAGT+TGG - chr5.3:67964821-67964840 None:intergenic 35.0%
CCTTTATGTTTCATTGCTTG+GGG + chr5.3:67965120-67965139 MS.gene29725:intron 35.0%
GAGAGATAAGAAAGAATTGC+AGG + chr5.3:67965534-67965553 MS.gene29725:CDS 35.0%
GTACATTAACAAAGCAATCG+TGG - chr5.3:67963606-67963625 None:intergenic 35.0%
TAATGATTGTCAAAGGACGT+TGG - chr5.3:67965338-67965357 None:intergenic 35.0%
TATGCTTAAATTTCCCAGCT+TGG + chr5.3:67964696-67964715 MS.gene29725:intron 35.0%
TCATCCCAATTAAACTAGCA+TGG - chr5.3:67964011-67964030 None:intergenic 35.0%
TCTTATCTCTCCATTTGAAC+CGG - chr5.3:67965525-67965544 None:intergenic 35.0%
! AGAGAAATTGATAACATGGG+TGG + chr5.3:67964994-67965013 MS.gene29725:intron 35.0%
! ATGATTTTCCACTAACGGTT+TGG + chr5.3:67963882-67963901 MS.gene29725:intron 35.0%
! CGAGAGAGAAATTGATAACA+TGG + chr5.3:67964990-67965009 MS.gene29725:intron 35.0%
! GATGCCATGCTAGTTTAATT+GGG + chr5.3:67964004-67964023 MS.gene29725:intron 35.0%
! TGATGCCATGCTAGTTTAAT+TGG + chr5.3:67964003-67964022 MS.gene29725:intron 35.0%
! TTCACAGTGTCAAAGAGTTT+TGG - chr5.3:67963517-67963536 None:intergenic 35.0%
!! AGCAAAGGAAGTATCTATGT+TGG - chr5.3:67965240-67965259 None:intergenic 35.0%
AATGTCTCCCATCTTGATCA+TGG - chr5.3:67965492-67965511 None:intergenic 40.0%
CAAGAACCTAGTTGACAGTA+AGG + chr5.3:67965361-67965380 MS.gene29725:CDS 40.0%
CAAGTTTCACATCCCATGTT+GGG - chr5.3:67964725-67964744 None:intergenic 40.0%
CCCCAAGCAATGAAACATAA+AGG - chr5.3:67965123-67965142 None:intergenic 40.0%
CGACAAAATCAAATCAGCAG+TGG + chr5.3:67964368-67964387 MS.gene29725:CDS 40.0%
GACCAACAACTCTTTAATGG+TGG + chr5.3:67965398-67965417 MS.gene29725:CDS 40.0%
GTTGGAGTCGTTGTAAATGT+GGG - chr5.3:67965222-67965241 None:intergenic 40.0%
TAGGTAAACCAAACCGTTAG+TGG - chr5.3:67963893-67963912 None:intergenic 40.0%
TCCGACCAACAACTCTTTAA+TGG + chr5.3:67965395-67965414 MS.gene29725:CDS 40.0%
TGACTTACGGTTTCTTTGTC+TGG + chr5.3:67963975-67963994 MS.gene29725:intron 40.0%
TGCCAATCCCAACAGAAATT+CGG + chr5.3:67964326-67964345 MS.gene29725:CDS 40.0%
TGTTGGAGTCGTTGTAAATG+TGG - chr5.3:67965223-67965242 None:intergenic 40.0%
!! AGGTTCTGGGGACAATAATT+TGG + chr5.3:67965292-67965311 MS.gene29725:CDS 40.0%
AAACCATTGCAGGGATGTGA+TGG + chr5.3:67964258-67964277 MS.gene29725:intron 45.0%
AACAGAGTCTCTAGCAGTGA+TGG - chr5.3:67964436-67964455 None:intergenic 45.0%
AGACAATGCGACCAAATCCT+TGG - chr5.3:67964859-67964878 None:intergenic 45.0%
AGTTGGTTGAGGCTTGAAGT+GGG - chr5.3:67964804-67964823 None:intergenic 45.0%
ATACTTCCTTTGCTCGCACA+AGG + chr5.3:67965246-67965265 MS.gene29725:CDS 45.0%
ATATCAAAGGAGACCCGCAT+GGG + chr5.3:67963556-67963575 MS.gene29725:CDS 45.0%
CCAACATGGGATGTGAAACT+TGG + chr5.3:67964723-67964742 MS.gene29725:CDS 45.0%
CCAAGTTTCACATCCCATGT+TGG - chr5.3:67964726-67964745 None:intergenic 45.0%
GAACTAGGTGGTCACACAAT+TGG + chr5.3:67965170-67965189 MS.gene29725:intron 45.0%
GATGACACATCAAGCTTCAC+CGG + chr5.3:67964294-67964313 MS.gene29725:CDS 45.0%
GCTTAAATTTCCCAGCTTGG+AGG + chr5.3:67964699-67964718 MS.gene29725:intron 45.0%
GTAGTCCCTTACTGTCAACT+AGG - chr5.3:67965370-67965389 None:intergenic 45.0%
GTCACACAATTGGACAAGCA+AGG + chr5.3:67965180-67965199 MS.gene29725:CDS 45.0%
TAAAGAGTTGTTGGTCGGAG+TGG - chr5.3:67965394-67965413 None:intergenic 45.0%
TGGACTTTCCACCAAGGATT+TGG + chr5.3:67964845-67964864 MS.gene29725:CDS 45.0%
TGTCGATCACTTCGAATCCA+CGG - chr5.3:67964353-67964372 None:intergenic 45.0%
! AAGGATTTGGTCGCATTGTC+TGG + chr5.3:67964858-67964877 MS.gene29725:CDS 45.0%
! AGCAGTGATGGTGAGGATAT+CGG - chr5.3:67964424-67964443 None:intergenic 45.0%
!! ACCTTGAGATGAGTTGGTTG+AGG - chr5.3:67964815-67964834 None:intergenic 45.0%
!! ACGTTGGTGTTGCAAGATCA+AGG - chr5.3:67965322-67965341 None:intergenic 45.0%
!! CGTTGGTGTTGCAAGATCAA+GGG - chr5.3:67965321-67965340 None:intergenic 45.0%
!! GTTGGTGTTGCAAGATCAAG+GGG - chr5.3:67965320-67965339 None:intergenic 45.0%
CAATGCGACCAAATCCTTGG+TGG - chr5.3:67964856-67964875 None:intergenic 50.0%
CATATCAAAGGAGACCCGCA+TGG + chr5.3:67963555-67963574 MS.gene29725:CDS 50.0%
CATGCGGGTCTCCTTTGATA+TGG - chr5.3:67963557-67963576 None:intergenic 50.0%
CTCTCCATTTGAACCGGTGA+GGG - chr5.3:67965519-67965538 None:intergenic 50.0%
GAACCATCACATCCCTGCAA+TGG - chr5.3:67964264-67964283 None:intergenic 50.0%
GCCTCAACCAACTCATCTCA+AGG + chr5.3:67964811-67964830 MS.gene29725:CDS 50.0%
GGCCGAATTTCTGTTGGGAT+TGG - chr5.3:67964331-67964350 None:intergenic 50.0%
GTCACCGCCATGATCAAGAT+GGG + chr5.3:67965482-67965501 MS.gene29725:CDS 50.0%
GTCGATCACTTCGAATCCAC+GGG - chr5.3:67964352-67964371 None:intergenic 50.0%
GTCTCCCATCTTGATCATGG+CGG - chr5.3:67965489-67965508 None:intergenic 50.0%
TCCCCAGAACCTGATGTCTT+GGG - chr5.3:67965284-67965303 None:intergenic 50.0%
TCTCCATTTGAACCGGTGAG+GGG - chr5.3:67965518-67965537 None:intergenic 50.0%
TCTCTCCATTTGAACCGGTG+AGG - chr5.3:67965520-67965539 None:intergenic 50.0%
TGATTGCCTTGTGCGAGCAA+AGG - chr5.3:67965255-67965274 None:intergenic 50.0%
TGCTCTTGGACTTTCCACCA+AGG + chr5.3:67964839-67964858 MS.gene29725:CDS 50.0%
TTGCTCGCACAAGGCAATCA+GGG + chr5.3:67965255-67965274 MS.gene29725:CDS 50.0%
TTTGCTCGCACAAGGCAATC+AGG + chr5.3:67965254-67965273 MS.gene29725:CDS 50.0%
! AGTCTCTAGCAGTGATGGTG+AGG - chr5.3:67964431-67964450 None:intergenic 50.0%
! GAGTTGGTTGAGGCTTGAAG+TGG - chr5.3:67964805-67964824 None:intergenic 50.0%
! GCAGTGGAGAAAGTATGTCC+AGG + chr5.3:67964384-67964403 MS.gene29725:CDS 50.0%
!! GGGATTGGCAGTTTTCTCTC+CGG - chr5.3:67964316-67964335 None:intergenic 50.0%
CCACGGGCCGAATTTCTGTT+GGG - chr5.3:67964336-67964355 None:intergenic 55.0%
CCCCAAGACATCAGGTTCTG+GGG + chr5.3:67965280-67965299 MS.gene29725:CDS 55.0%
CCCCAGAACCTGATGTCTTG+GGG - chr5.3:67965283-67965302 None:intergenic 55.0%
CGTCACCGCCATGATCAAGA+TGG + chr5.3:67965481-67965500 MS.gene29725:CDS 55.0%
GCCCCAAGACATCAGGTTCT+GGG + chr5.3:67965279-67965298 MS.gene29725:CDS 55.0%
GGAGACATTAGTCCCCTCAC+CGG + chr5.3:67965503-67965522 MS.gene29725:CDS 55.0%
GTCCCCAGAACCTGATGTCT+TGG - chr5.3:67965285-67965304 None:intergenic 55.0%
TCCACGGGCCGAATTTCTGT+TGG - chr5.3:67964337-67964356 None:intergenic 55.0%
TGAGGCTTGAAGTGGGTGCT+GGG - chr5.3:67964797-67964816 None:intergenic 55.0%
TGCCCCAAGACATCAGGTTC+TGG + chr5.3:67965278-67965297 MS.gene29725:CDS 55.0%
TTGAGGCTTGAAGTGGGTGC+TGG - chr5.3:67964798-67964817 None:intergenic 55.0%
!! AGTCCCCTCACCGGTTCAAA+TGG + chr5.3:67965512-67965531 MS.gene29725:CDS 55.0%
!! CAGAAGAGAAGCACCCATGC+GGG - chr5.3:67963572-67963591 None:intergenic 55.0%
!! GCAGAAGAGAAGCACCCATG+CGG - chr5.3:67963573-67963592 None:intergenic 55.0%
CCAGCTTGGAGGCCCAACAT+GGG + chr5.3:67964710-67964729 MS.gene29725:intron 60.0%
CCATGTTGGGCCTCCAAGCT+GGG - chr5.3:67964712-67964731 None:intergenic 60.0%
CCCAACAGAAATTCGGCCCG+TGG + chr5.3:67964333-67964352 MS.gene29725:CDS 60.0%
TCGGCGCATGAAACTGCACC+TGG - chr5.3:67964405-67964424 None:intergenic 60.0%
! TCAGGGTGCCCCAAGACATC+AGG + chr5.3:67965272-67965291 MS.gene29725:CDS 60.0%
CCCAGCTTGGAGGCCCAACA+TGG + chr5.3:67964709-67964728 MS.gene29725:intron 65.0%
CCCATGTTGGGCCTCCAAGC+TGG - chr5.3:67964713-67964732 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 67963415 67965568 67963415 ID=MS.gene29725
chr5.3 mRNA 67963415 67965568 67963415 ID=MS.gene29725.t1;Parent=MS.gene29725
chr5.3 exon 67963415 67963621 67963415 ID=MS.gene29725.t1.exon1;Parent=MS.gene29725.t1
chr5.3 CDS 67963415 67963621 67963415 ID=cds.MS.gene29725.t1;Parent=MS.gene29725.t1
chr5.3 exon 67964270 67964461 67964270 ID=MS.gene29725.t1.exon2;Parent=MS.gene29725.t1
chr5.3 CDS 67964270 67964461 67964270 ID=cds.MS.gene29725.t1;Parent=MS.gene29725.t1
chr5.3 exon 67964714 67964879 67964714 ID=MS.gene29725.t1.exon3;Parent=MS.gene29725.t1
chr5.3 CDS 67964714 67964879 67964714 ID=cds.MS.gene29725.t1;Parent=MS.gene29725.t1
chr5.3 exon 67965177 67965568 67965177 ID=MS.gene29725.t1.exon4;Parent=MS.gene29725.t1
chr5.3 CDS 67965177 67965568 67965177 ID=cds.MS.gene29725.t1;Parent=MS.gene29725.t1
Gene Sequence

>MS.gene29725

ATGACAAGTAATTTAATGATTTGTTTTTCCCTTTTGGTTCTTGTATCAATTGGGAGTGCCAATGCTAATCTTTCGAAAGATTATTACTATAGTTCTTGTCCAAAACTCTTTGACACTGTGAAGTGTGAAGTTCAATCTGCCATATCAAAGGAGACCCGCATGGGTGCTTCTCTTCTGCGTTTGTTCTTCCACGATTGCTTTGTTAATGTACATTTTTTTTTCTTCTCTCTCATTTATATTCAATTACATTTAAACATGTATATATATGTTATGTTATAATATTATATTTTAAAAATAATACTTCCTTCGATCTTATTTATAAGAGACATTTTTTTTTGAGATTATAAGAGACATTTAAATAAACAAAAGTCGATGTATGTTGTTTAAATTTTAAACGAGTTACATCAACTTTTGTTTACTCAAATATATCTTATAAATATGACAAAATAAAGTATCATAAATATAGAATGATTTTCCACTAACGGTTTGGTTTACCTACTTTTAACTTTTTTTTTTTTTAAATGCTTTCGTTTCTCTCAATATATTATATTTAACAATATTGACTTACGGTTTCTTTGTCTGGTATAGTGATGCCATGCTAGTTTAATTGGGATGAATAATCTAACCTCTTTGATGCTACTTGCTTTTGCTTAAAAAATTGTTGTGCTGATACGATTGAACATTGTGTACAACTATTTTTCTGTAGATACAAATTAAATTATAAAAACATATGAATATTTTTAATATAGTATTTACTAAATTTGACACTTGTTATGAGATTGAGAAAGTATTATTTTCTATGGACTATACAATTCATTGGCAAATTTGAATTGAATAATAAATAAACCATTGCAGGGATGTGATGGTTCAATTCTTCTCGATGACACATCAAGCTTCACCGGAGAGAAAACTGCCAATCCCAACAGAAATTCGGCCCGTGGATTCGAAGTGATCGACAAAATCAAATCAGCAGTGGAGAAAGTATGTCCAGGTGCAGTTTCATGCGCCGATATCCTCACCATCACTGCTAGAGACTCTGTTGAGATCGTAAGTATCCACAAAAATTGCATCATAATAAACATATTAAACGGAAACATAAAATTTGATCAAATTTTAATATTTCCCTATACATTTTAGAGAATAAAGTTATTAAAATCTCAATATAATACCTAAAGTTATTAAAATCTCAATATAATACCTAATGGAACGATCAATGTAAAACTGTATTACACTGTAAGTGAATACGAATATAAATATATTGTATAAATTATACTAATTGATTATGCTTAAATTTCCCAGCTTGGAGGCCCAACATGGGATGTGAAACTTGGAAGAAGAGATGCTAGAACAGCTAGTAAATCAGCTGCAAACAATGGCATCCCAGCACCCACTTCAAGCCTCAACCAACTCATCTCAAGGTTTAATGCTCTTGGACTTTCCACCAAGGATTTGGTCGCATTGTCTGGTATGTTACATTGATTATAATCCCACATATACATCTATTCTATTGATTAAGTCAATTTGTCAATAATTGGTCGTATATTTTTCATATATAGATTAATATATAAGTATACGCGAGAGAGAAATTGATAACATGGGTGGAAATTATTATTAAGGATTTGTGTAACATGTGCAACATTGCACATGCTTTTTTTCTTCTTTTCTAAACAACAATTATTTATAAGCGTGGTATTAATAATTATTTCCTTTATGTTTCATTGCTTGGGGTAAATCTTGATTTTTTAAATGATACTTGAACTAGGTGGTCACACAATTGGACAAGCAAGGTGCACTACATTTAGAGCCCACATTTACAACGACTCCAACATAGATACTTCCTTTGCTCGCACAAGGCAATCAGGGTGCCCCAAGACATCAGGTTCTGGGGACAATAATTTGGCACCCCTTGATCTTGCAACACCAACGTCCTTTGACAATCATTACTTCAAGAACCTAGTTGACAGTAAGGGACTACTCCACTCCGACCAACAACTCTTTAATGGTGGATCTACCGATTCTATAGTGCACGAATATAGCTTGTATCCAAGCTCTTTTTCTTCTGATTTCGTCACCGCCATGATCAAGATGGGAGACATTAGTCCCCTCACCGGTTCAAATGGAGAGATAAGAAAGAATTGCAGGAGTGTGAATTAA
Protein sequence

>MS.gene29725.t1

MTSNLMICFSLLVLVSIGSANANLSKDYYYSSCPKLFDTVKCEVQSAISKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKTANPNRNSARGFEVIDKIKSAVEKVCPGAVSCADILTITARDSVEILGGPTWDVKLGRRDARTASKSAANNGIPAPTSSLNQLISRFNALGLSTKDLVALSGGHTIGQARCTTFRAHIYNDSNIDTSFARTRQSGCPKTSGSGDNNLAPLDLATPTSFDNHYFKNLVDSKGLLHSDQQLFNGGSTDSIVHEYSLYPSSFSSDFVTAMIKMGDISPLTGSNGEIRKNCRSVN