Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30949.t1 | RHN76065.1 | 91.7 | 757 | 23 | 3 | 1 | 722 | 33 | 784 | 0.00E+00 | 1330.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30949.t1 | Q6DAH4 | 29.8 | 171 | 100 | 5 | 365 | 519 | 13 | 179 | 2.3e-06 | 55.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30949.t1 | G7IHP1 | 91.7 | 757 | 23 | 3 | 1 | 722 | 1 | 752 | 0.0e+00 | 1330.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050338 | MS.gene30949 | 0.842076 | 3.23E-58 | -1.69E-46 |
MS.gene050444 | MS.gene30949 | -0.830092 | 3.57E-55 | -1.69E-46 |
MS.gene050612 | MS.gene30949 | -0.807144 | 5.83E-50 | -1.69E-46 |
MS.gene051138 | MS.gene30949 | 0.82017 | 7.90E-53 | -1.69E-46 |
MS.gene051749 | MS.gene30949 | 0.800003 | 1.77E-48 | -1.69E-46 |
MS.gene052129 | MS.gene30949 | 0.976622 | 3.53E-142 | -1.69E-46 |
MS.gene052870 | MS.gene30949 | -0.800558 | 1.36E-48 | -1.69E-46 |
MS.gene052872 | MS.gene30949 | -0.823359 | 1.45E-53 | -1.69E-46 |
MS.gene054706 | MS.gene30949 | 0.803204 | 3.90E-49 | -1.69E-46 |
MS.gene055748 | MS.gene30949 | -0.832883 | 7.33E-56 | -1.69E-46 |
MS.gene055751 | MS.gene30949 | -0.840515 | 8.30E-58 | -1.69E-46 |
MS.gene05589 | MS.gene30949 | -0.807973 | 3.89E-50 | -1.69E-46 |
MS.gene056387 | MS.gene30949 | -0.801389 | 9.21E-49 | -1.69E-46 |
MS.gene056856 | MS.gene30949 | 0.836864 | 7.29E-57 | -1.69E-46 |
MS.gene058334 | MS.gene30949 | 0.831016 | 2.12E-55 | -1.69E-46 |
MS.gene05926 | MS.gene30949 | 0.808926 | 2.44E-50 | -1.69E-46 |
MS.gene059699 | MS.gene30949 | 0.800879 | 1.17E-48 | -1.69E-46 |
MS.gene060405 | MS.gene30949 | 0.810894 | 9.18E-51 | -1.69E-46 |
MS.gene060762 | MS.gene30949 | -0.805666 | 1.20E-49 | -1.69E-46 |
MS.gene061044 | MS.gene30949 | 0.816485 | 5.40E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30949.t1 | MTR_2g096670 | 91.678 | 757 | 23 | 3 | 1 | 722 | 1 | 752 | 0.0 | 1377 |
MS.gene30949.t1 | MTR_7g099710 | 39.096 | 752 | 399 | 13 | 18 | 720 | 14 | 755 | 3.84e-167 | 502 |
MS.gene30949.t1 | MTR_7g073075 | 46.237 | 93 | 49 | 1 | 82 | 174 | 16 | 107 | 1.43e-16 | 77.0 |
MS.gene30949.t1 | MTR_7g063050 | 44.086 | 93 | 51 | 1 | 82 | 174 | 16 | 107 | 4.46e-14 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30949.t1 | AT2G28780 | 48.299 | 735 | 325 | 11 | 18 | 714 | 10 | 727 | 0.0 | 637 |
MS.gene30949.t1 | AT3G09450 | 37.097 | 744 | 415 | 18 | 19 | 719 | 6 | 739 | 6.91e-130 | 404 |
Find 159 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAACCACATTACAATAAAT+TGG | 0.110040 | 2.2:+5423238 | MS.gene30949:CDS |
ACGAAGGTAACGACGATAAA+TGG | 0.135921 | 2.2:+5423777 | MS.gene30949:CDS |
GTCCAGCTATGTTGAGTTTA+TGG | 0.169702 | 2.2:+5417176 | MS.gene30949:CDS |
GAGGATGACACGTGGCTTTC+GGG | 0.213052 | 2.2:+5424763 | MS.gene30949:CDS |
GGCACATGTTGAAGCCCTTT+TGG | 0.213590 | 2.2:-5424272 | None:intergenic |
ACGACGATAAATGGGCTAAT+TGG | 0.230812 | 2.2:+5423786 | MS.gene30949:CDS |
GTAGCTGGTGCAACACTTTA+TGG | 0.234606 | 2.2:+5417013 | MS.gene30949:CDS |
ACATTGGGAGAGTTCATATT+TGG | 0.246253 | 2.2:-5424293 | None:intergenic |
AGTTTCGATGATTCTTTCTA+TGG | 0.249865 | 2.2:-5424203 | None:intergenic |
GGCTGGGCTTGGACATTTGT+TGG | 0.261014 | 2.2:-5423731 | None:intergenic |
TGACACGTGGCTTTCGGGTT+TGG | 0.276642 | 2.2:+5424768 | MS.gene30949:CDS |
TTCATAGTGGTTGCTATAAT+AGG | 0.277095 | 2.2:+5424473 | MS.gene30949:CDS |
GTGGCATTTCGGCTGTGATT+GGG | 0.280433 | 2.2:+5424131 | MS.gene30949:CDS |
GACACGTGGCTTTCGGGTTT+GGG | 0.284107 | 2.2:+5424769 | MS.gene30949:CDS |
ATAGCAAAGAAAGTGGTTTC+TGG | 0.285067 | 2.2:+5423894 | MS.gene30949:CDS |
GGTGGCATTTCGGCTGTGAT+TGG | 0.293729 | 2.2:+5424130 | MS.gene30949:CDS |
AGCTTCTATTGCTGTGGCTT+TGG | 0.297296 | 2.2:+5417231 | MS.gene30949:CDS |
AAAATGCAGGGAATGTTATT+AGG | 0.304540 | 2.2:-5417054 | None:intergenic |
TGGGCCTGCGGGTGGCATTT+CGG | 0.304664 | 2.2:+5424120 | MS.gene30949:CDS |
AGAGGATGACACGTGGCTTT+CGG | 0.307613 | 2.2:+5424762 | MS.gene30949:CDS |
GTTCCTTTAGAGAAATGATT+TGG | 0.308003 | 2.2:-5417208 | None:intergenic |
TATGCTACAATTCAAAGTTT+AGG | 0.311346 | 2.2:+5417154 | MS.gene30949:CDS |
GCTGGGCTTGGACATTTGTT+GGG | 0.315602 | 2.2:-5423730 | None:intergenic |
ATCATAAATGATGCTACTTT+AGG | 0.316843 | 2.2:+5417100 | MS.gene30949:CDS |
AATCTCTCGTGCTAAGTCTT+TGG | 0.317198 | 2.2:+5422810 | MS.gene30949:CDS |
TTGGCAGCTAGTACTGCTTT+AGG | 0.328010 | 2.2:+5417391 | MS.gene30949:CDS |
GATAGCTAAGAGAATTTCAT+TGG | 0.329080 | 2.2:+5417294 | MS.gene30949:CDS |
AATTTCTTCAAGACCTTTGA+TGG | 0.337569 | 2.2:-5424656 | None:intergenic |
TCCACACTTGTTGAATCAAT+TGG | 0.347555 | 2.2:+5424319 | MS.gene30949:CDS |
GAAGGAGTTTGGCACAAAAT+AGG | 0.348823 | 2.2:-5423685 | None:intergenic |
TCCAGCTATGTTGAGTTTAT+GGG | 0.350617 | 2.2:+5417177 | MS.gene30949:CDS |
AAATGAATAGGATGCATAAT+AGG | 0.364653 | 2.2:-5417370 | None:intergenic |
AAAGAAAGTGGTTTCTGGTC+TGG | 0.364944 | 2.2:+5423899 | MS.gene30949:CDS |
TCTTTACGTGGTTGTTGGCT+AGG | 0.368993 | 2.2:+5417127 | MS.gene30949:CDS |
GATTGTGTTGGTGTATGTAT+TGG | 0.369068 | 2.2:+5417321 | MS.gene30949:CDS |
CATGTCTAATGATGTTGAAA+TGG | 0.374095 | 2.2:+5424729 | MS.gene30949:CDS |
TAGCAAAACTGATTCACAAT+TGG | 0.376735 | 2.2:+5424357 | MS.gene30949:CDS |
CGACGATAAATGGGCTAATT+GGG | 0.377900 | 2.2:+5423787 | MS.gene30949:CDS |
AAGTGTTGCACCAGCTACTA+TGG | 0.379492 | 2.2:-5417008 | None:intergenic |
TATTATGCATCCTATTCATT+TGG | 0.379859 | 2.2:+5417372 | MS.gene30949:CDS |
ATTGGGCCTATCAGTCTTCA+TGG | 0.382307 | 2.2:+5423862 | MS.gene30949:CDS |
TCCTTGGGCTTTAACATTTG+CGG | 0.386987 | 2.2:-5423972 | None:intergenic |
TGATTTCATGTGAAGGAGTT+TGG | 0.391065 | 2.2:-5423696 | None:intergenic |
AAACTTGAATGATTTCATCT+TGG | 0.393368 | 2.2:-5424680 | None:intergenic |
AAGAAAGTGGTTTCTGGTCT+GGG | 0.393614 | 2.2:+5423900 | MS.gene30949:CDS |
AAACCACATTACAATAAATT+GGG | 0.395638 | 2.2:+5423239 | MS.gene30949:CDS |
TATGTATTGGCTTATTCTAA+TGG | 0.398544 | 2.2:+5417334 | MS.gene30949:CDS |
TTGGACATTTGTTGGGCCCT+CGG | 0.399774 | 2.2:-5423723 | None:intergenic |
ATGTTGAGTTTATGGGCTAT+AGG | 0.405854 | 2.2:+5417184 | MS.gene30949:CDS |
CTTTCTATGGCGAACTCGCT+TGG | 0.406770 | 2.2:-5424190 | None:intergenic |
ATAAAGTACTCTTTCGCATT+GGG | 0.406934 | 2.2:+5423845 | MS.gene30949:CDS |
CTTCAACGAAGCCGTATGTA+TGG | 0.407950 | 2.2:+5424100 | MS.gene30949:CDS |
CTTTCGGGTTTGGGAGAAGA+TGG | 0.412988 | 2.2:+5424778 | MS.gene30949:CDS |
AGGCTCATTATCAAAGTTAG+TGG | 0.415380 | 2.2:+5424501 | MS.gene30949:CDS |
CGAAGGTAACGACGATAAAT+GGG | 0.417608 | 2.2:+5423778 | MS.gene30949:CDS |
AAGTGAACTTCTACATGTTA+AGG | 0.424106 | 2.2:+5424618 | MS.gene30949:CDS |
AAAGCCCAAGGAACGGTGAT+TGG | 0.424570 | 2.2:+5423983 | MS.gene30949:CDS |
GTGACTCTTTACGTGGTTGT+TGG | 0.428893 | 2.2:+5417122 | MS.gene30949:CDS |
CAGTTCCAATCACCGTTCCT+TGG | 0.432211 | 2.2:-5423988 | None:intergenic |
GAGATCACCACTAAACCTTA+TGG | 0.433380 | 2.2:+5416913 | MS.gene30949:CDS |
GTGGCCGTAAGCTATGTTTC+AGG | 0.434352 | 2.2:+5423929 | MS.gene30949:CDS |
GGTAATTCTTGGTGAGTTGT+TGG | 0.437818 | 2.2:-5423650 | None:intergenic |
AGTTCCAATCACCGTTCCTT+GGG | 0.438721 | 2.2:-5423987 | None:intergenic |
ATTAGGCTTGTAATTGAAGT+AGG | 0.441014 | 2.2:-5417037 | None:intergenic |
GGTCCAAATCATTTCTCTAA+AGG | 0.442276 | 2.2:+5417205 | MS.gene30949:CDS |
GATTCTTGTCACTACTTCCA+TGG | 0.446613 | 2.2:+5424059 | MS.gene30949:CDS |
CATAATGACGATATTATTTG+AGG | 0.449929 | 2.2:+5426070 | MS.gene30949:CDS |
GTACTAGCTGCCAAATGAAT+AGG | 0.450169 | 2.2:-5417382 | None:intergenic |
AATGCTAAACACTCTTTCCT+TGG | 0.451588 | 2.2:+5423554 | MS.gene30949:CDS |
CTTTACGTGGTTGTTGGCTA+GGG | 0.455719 | 2.2:+5417128 | MS.gene30949:CDS |
GAGATTGAAGATTCTTGTAA+AGG | 0.459077 | 2.2:+5422750 | MS.gene30949:CDS |
AGAAAATCAAAGAAAACTTA+AGG | 0.461877 | 2.2:+5424381 | MS.gene30949:CDS |
AGCAAAACTGATTCACAATT+GGG | 0.462198 | 2.2:+5424358 | MS.gene30949:CDS |
ATTATTTGCTCTTCCATCAA+AGG | 0.463540 | 2.2:+5424643 | MS.gene30949:CDS |
TTATAGCAACCACTATGAAA+TGG | 0.463626 | 2.2:-5424469 | None:intergenic |
TGTTGAAGAAACTCACCATA+AGG | 0.464536 | 2.2:-5416928 | None:intergenic |
GCTTAGAAAATTTGTGATAG+AGG | 0.465324 | 2.2:+5424417 | MS.gene30949:CDS |
AAACACTCTTTCCTTGGTGG+TGG | 0.466264 | 2.2:+5423560 | MS.gene30949:CDS |
ATAAGCCCATGAAGACTGAT+AGG | 0.475203 | 2.2:-5423868 | None:intergenic |
GGAACTGTGTACGGTGTGTT+GGG | 0.476790 | 2.2:+5424004 | MS.gene30949:CDS |
CATACATACGGCTTCGTTGA+AGG | 0.483582 | 2.2:-5424099 | None:intergenic |
GACAAGGAGCTTGGTTCGCT+TGG | 0.486715 | 2.2:-5422836 | None:intergenic |
CACCCGCAGGCCCATACATA+CGG | 0.486745 | 2.2:-5424111 | None:intergenic |
GTATAGTGATGAAGGTGAGA+AGG | 0.487410 | 2.2:+5424858 | MS.gene30949:CDS |
GGCTTTGGCTGCATTTGTTG+TGG | 0.488680 | 2.2:+5417246 | MS.gene30949:CDS |
TGGAACTGTGTACGGTGTGT+TGG | 0.488951 | 2.2:+5424003 | MS.gene30949:CDS |
AAACTCACCATAAGGTTTAG+TGG | 0.489783 | 2.2:-5416920 | None:intergenic |
TCTCCCAATTTATTGTAATG+TGG | 0.490806 | 2.2:-5423242 | None:intergenic |
GCCCATAAACTCAACATAGC+TGG | 0.491924 | 2.2:-5417178 | None:intergenic |
CAACAAGTGTGGACAAACAT+TGG | 0.496700 | 2.2:-5424309 | None:intergenic |
AACAAGTGTGGACAAACATT+GGG | 0.497246 | 2.2:-5424308 | None:intergenic |
ATGTCTAATGATGTTGAAAT+GGG | 0.497914 | 2.2:+5424730 | MS.gene30949:CDS |
AACATTTGCGGCCCGAAAAG+TGG | 0.502931 | 2.2:-5423960 | None:intergenic |
CTATGGCGAACTCGCTTGGT+GGG | 0.507072 | 2.2:-5424186 | None:intergenic |
GATAAAGTACTCTTTCGCAT+TGG | 0.507856 | 2.2:+5423844 | MS.gene30949:CDS |
TGGCATTTCGGCTGTGATTG+GGG | 0.516872 | 2.2:+5424132 | MS.gene30949:CDS |
TCTATGGCGAACTCGCTTGG+TGG | 0.517047 | 2.2:-5424187 | None:intergenic |
TTCATTGGGTCAGATTGTGT+TGG | 0.518394 | 2.2:+5417309 | MS.gene30949:CDS |
CATGATGGTGACAAGGAGCT+TGG | 0.520052 | 2.2:-5422845 | None:intergenic |
GCTAAACACTCTTTCCTTGG+TGG | 0.523877 | 2.2:+5423557 | MS.gene30949:CDS |
AGCCGTATGTATGGGCCTGC+GGG | 0.529646 | 2.2:+5424109 | MS.gene30949:CDS |
CGAAAGAGTACTTTATCGCC+GGG | 0.530456 | 2.2:-5423838 | None:intergenic |
ATAGCTAAGAGAATTTCATT+GGG | 0.530885 | 2.2:+5417295 | MS.gene30949:CDS |
TTAGCTTGCACCATAGTAGC+TGG | 0.538892 | 2.2:+5416998 | MS.gene30949:CDS |
GAGGAAAATACTTCTGCACT+TGG | 0.539006 | 2.2:+5422784 | MS.gene30949:CDS |
TTGGGCCTATCAGTCTTCAT+GGG | 0.541653 | 2.2:+5423863 | MS.gene30949:CDS |
AGCTACTATGGTGCAAGCTA+AGG | 0.550762 | 2.2:-5416996 | None:intergenic |
GCGAAAGAGTACTTTATCGC+CGG | 0.552881 | 2.2:-5423839 | None:intergenic |
TAGTGATGAAGGTGAGAAGG+AGG | 0.554892 | 2.2:+5424861 | MS.gene30949:CDS |
ACAACCACGTATGAAAATGC+AGG | 0.556350 | 2.2:-5417067 | None:intergenic |
GAAAAGCTCAAATCTTCTCC+CGG | 0.557561 | 2.2:+5423820 | MS.gene30949:CDS |
TCCAATTGATTCAACAAGTG+TGG | 0.561122 | 2.2:-5424320 | None:intergenic |
GAGAAGTTGTATAGTGATGA+AGG | 0.561390 | 2.2:+5424850 | MS.gene30949:CDS |
GTGAATAGGATGGCATGAAG+TGG | 0.561615 | 2.2:+5423192 | MS.gene30949:intron |
CGTATGTATGGGCCTGCGGG+TGG | 0.561768 | 2.2:+5424112 | MS.gene30949:CDS |
TCTTGTAAAGGTAATTAGTG+AGG | 0.562334 | 2.2:+5422762 | MS.gene30949:CDS |
TTCTTGGTGAGTTGTTGGAA+TGG | 0.566246 | 2.2:-5423645 | None:intergenic |
TAGCAAGCAAAACGAGGGTA+AGG | 0.567321 | 2.2:-5417445 | None:intergenic |
TGAATAGGATGGCATGAAGT+GGG | 0.567763 | 2.2:+5423193 | MS.gene30949:intron |
TTCAACGAAGCCGTATGTAT+GGG | 0.573243 | 2.2:+5424101 | MS.gene30949:CDS |
ACAGCCGAAATGCCACCCGC+AGG | 0.576761 | 2.2:-5424124 | None:intergenic |
GAGTTGTTGGAATGGTATGA+AGG | 0.577072 | 2.2:-5423637 | None:intergenic |
TTTAGGTGTACTTGCTTGTG+TGG | 0.579366 | 2.2:+5417408 | MS.gene30949:CDS |
TGTAAAGGTAATTAGTGAGG+AGG | 0.580554 | 2.2:+5422765 | MS.gene30949:CDS |
GCCGCAAATGTTAAAGCCCA+AGG | 0.580581 | 2.2:+5423971 | MS.gene30949:CDS |
TCTTCAACATTCCACCATTG+TGG | 0.583422 | 2.2:+5416942 | MS.gene30949:CDS |
GAAACATAGCTTACGGCCAC+GGG | 0.584089 | 2.2:-5423926 | None:intergenic |
TCTACCTGAAACATAGCTTA+CGG | 0.586470 | 2.2:-5423933 | None:intergenic |
ATCAAATGTGTTGATTGAGA+AGG | 0.588852 | 2.2:-5417274 | None:intergenic |
TACTATGGTGCAAGCTAAGG+CGG | 0.590061 | 2.2:-5416993 | None:intergenic |
AAGCCGTATGTATGGGCCTG+CGG | 0.590070 | 2.2:+5424108 | MS.gene30949:CDS |
GTATAGCGTGTCCGACGAGG+TGG | 0.590314 | 2.2:-5426019 | None:intergenic |
TTTCTGGTCTGGGCTTCCCG+TGG | 0.596132 | 2.2:+5423910 | MS.gene30949:CDS |
AGGAACAGCTTCTATTGCTG+TGG | 0.597039 | 2.2:+5417225 | MS.gene30949:CDS |
CGGTTGATGATTTCATGTGA+AGG | 0.604472 | 2.2:-5423703 | None:intergenic |
TGAAACATAGCTTACGGCCA+CGG | 0.608815 | 2.2:-5423927 | None:intergenic |
ACCTGGTAGCAAGCAAAACG+AGG | 0.611529 | 2.2:-5417451 | None:intergenic |
ACTTACTAGGTAGCGCATGA+TGG | 0.612005 | 2.2:-5422860 | None:intergenic |
ACGGTGATTGGAACTGTGTA+CGG | 0.612228 | 2.2:+5423995 | MS.gene30949:CDS |
TTATTGTATAGCAAAGAAAG+TGG | 0.612494 | 2.2:+5423887 | MS.gene30949:CDS |
AGACACTCTCTCCACAATGG+TGG | 0.614352 | 2.2:-5416953 | None:intergenic |
AGTTGTTGGAATGGTATGAA+GGG | 0.627832 | 2.2:-5423636 | None:intergenic |
ACTTTAGGTGACTCTTTACG+TGG | 0.633071 | 2.2:+5417115 | MS.gene30949:CDS |
AAACTTGTGAAAATGAACCA+TGG | 0.633234 | 2.2:-5424076 | None:intergenic |
TATAGCGTGTCCGACGAGGT+GGG | 0.634370 | 2.2:-5426018 | None:intergenic |
CAACCACGTATGAAAATGCA+GGG | 0.636482 | 2.2:-5417066 | None:intergenic |
CGTGTATAGCGTGTCCGACG+AGG | 0.642538 | 2.2:-5426022 | None:intergenic |
CACATGAAATCATCAACCGA+GGG | 0.643413 | 2.2:+5423707 | MS.gene30949:CDS |
TGAAATGGGAAAGTCAAGAG+AGG | 0.644013 | 2.2:+5424744 | MS.gene30949:CDS |
AAATGTTAAAGCCCAAGGAA+CGG | 0.649091 | 2.2:+5423976 | MS.gene30949:CDS |
GAGAGACACTCTCTCCACAA+TGG | 0.669619 | 2.2:-5416956 | None:intergenic |
ATTGGGAGAGAAACTTCAAG+AGG | 0.670648 | 2.2:+5423256 | MS.gene30949:CDS |
TCACATGAAATCATCAACCG+AGG | 0.671809 | 2.2:+5423706 | MS.gene30949:CDS |
GGTAGCGCATGATGGTGACA+AGG | 0.690763 | 2.2:-5422852 | None:intergenic |
CGTCGGACACGCTATACACG+AGG | 0.697136 | 2.2:+5426025 | MS.gene30949:CDS |
CCTGGTAGCAAGCAAAACGA+GGG | 0.704969 | 2.2:-5417450 | None:intergenic |
CAGTAAGTGAACCACCACCA+AGG | 0.716844 | 2.2:-5423571 | None:intergenic |
TATCGTCATTATGAGCTGTG+AGG | 0.721849 | 2.2:-5426060 | None:intergenic |
AGTCAAGAGAGGATGACACG+TGG | 0.753312 | 2.2:+5424755 | MS.gene30949:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 5416908 | 5426090 | 5416908 | ID=MS.gene30949 |
chr2.2 | mRNA | 5416908 | 5426090 | 5416908 | ID=MS.gene30949.t1;Parent=MS.gene30949 |
chr2.2 | exon | 5416908 | 5417471 | 5416908 | ID=MS.gene30949.t1.exon1;Parent=MS.gene30949.t1 |
chr2.2 | CDS | 5416908 | 5417471 | 5416908 | ID=cds.MS.gene30949.t1;Parent=MS.gene30949.t1 |
chr2.2 | exon | 5422709 | 5422876 | 5422709 | ID=MS.gene30949.t1.exon2;Parent=MS.gene30949.t1 |
chr2.2 | CDS | 5422709 | 5422876 | 5422709 | ID=cds.MS.gene30949.t1;Parent=MS.gene30949.t1 |
chr2.2 | exon | 5423200 | 5423277 | 5423200 | ID=MS.gene30949.t1.exon3;Parent=MS.gene30949.t1 |
chr2.2 | CDS | 5423200 | 5423277 | 5423200 | ID=cds.MS.gene30949.t1;Parent=MS.gene30949.t1 |
chr2.2 | exon | 5423530 | 5424882 | 5423530 | ID=MS.gene30949.t1.exon4;Parent=MS.gene30949.t1 |
chr2.2 | CDS | 5423530 | 5424882 | 5423530 | ID=cds.MS.gene30949.t1;Parent=MS.gene30949.t1 |
chr2.2 | exon | 5426016 | 5426090 | 5426016 | ID=MS.gene30949.t1.exon5;Parent=MS.gene30949.t1 |
chr2.2 | CDS | 5426016 | 5426090 | 5426016 | ID=cds.MS.gene30949.t1;Parent=MS.gene30949.t1 |
Gene Sequence |
Protein sequence |