Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31054.t1 | XP_003602462.1 | 96.3 | 322 | 12 | 0 | 1 | 322 | 1 | 322 | 4.00E-172 | 614 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31054.t1 | A7NY33 | 70.4 | 314 | 93 | 0 | 9 | 322 | 8 | 321 | 2.9e-123 | 443.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31054.t1 | G7J9S1 | 96.3 | 322 | 12 | 0 | 1 | 322 | 1 | 322 | 2.9e-172 | 614.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene31054 | MS.gene41565 | PPI |
MS.gene26286 | MS.gene31054 | PPI |
MS.gene049488 | MS.gene31054 | PPI |
MS.gene49484 | MS.gene31054 | PPI |
MS.gene31054 | MS.gene017208 | PPI |
MS.gene31054 | MS.gene008562 | PPI |
MS.gene26287 | MS.gene31054 | PPI |
MS.gene31054 | MS.gene009691 | PPI |
MS.gene31054 | MS.gene38511 | PPI |
MS.gene017207 | MS.gene31054 | PPI |
MS.gene009689 | MS.gene31054 | PPI |
MS.gene31054 | MS.gene98878 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31054.t1 | MTR_3g094650 | 96.273 | 322 | 12 | 0 | 1 | 322 | 1 | 322 | 0.0 | 639 |
MS.gene31054.t1 | MTR_3g094670 | 89.130 | 322 | 35 | 0 | 1 | 322 | 1 | 322 | 0.0 | 567 |
MS.gene31054.t1 | MTR_3g094630 | 86.646 | 322 | 43 | 0 | 1 | 322 | 1 | 322 | 0.0 | 548 |
MS.gene31054.t1 | MTR_5g083860 | 75.478 | 314 | 76 | 1 | 9 | 322 | 13 | 325 | 1.50e-170 | 476 |
MS.gene31054.t1 | MTR_3g466200 | 67.516 | 314 | 101 | 1 | 10 | 322 | 7 | 320 | 1.59e-155 | 438 |
MS.gene31054.t1 | MTR_5g074970 | 64.308 | 325 | 109 | 4 | 4 | 322 | 3 | 326 | 2.21e-147 | 417 |
MS.gene31054.t1 | MTR_2g084020 | 66.881 | 311 | 100 | 3 | 13 | 322 | 10 | 318 | 3.62e-145 | 412 |
MS.gene31054.t1 | MTR_2g084110 | 64.516 | 310 | 108 | 1 | 13 | 322 | 10 | 317 | 5.18e-143 | 406 |
MS.gene31054.t1 | MTR_2g084080 | 65.049 | 309 | 106 | 1 | 14 | 322 | 11 | 317 | 1.19e-142 | 405 |
MS.gene31054.t1 | MTR_2g084010 | 65.595 | 311 | 104 | 2 | 13 | 322 | 10 | 318 | 1.27e-142 | 405 |
MS.gene31054.t1 | MTR_2g084090 | 64.103 | 312 | 111 | 1 | 11 | 322 | 8 | 318 | 3.21e-141 | 402 |
MS.gene31054.t1 | MTR_2g084000 | 61.905 | 315 | 113 | 4 | 9 | 322 | 11 | 319 | 9.42e-135 | 385 |
MS.gene31054.t1 | MTR_7g072510 | 59.935 | 307 | 121 | 1 | 16 | 322 | 8 | 312 | 1.81e-134 | 384 |
MS.gene31054.t1 | MTR_3g072190 | 59.062 | 320 | 123 | 2 | 9 | 322 | 1 | 318 | 5.25e-133 | 381 |
MS.gene31054.t1 | MTR_3g466180 | 60.897 | 312 | 120 | 1 | 11 | 322 | 14 | 323 | 4.62e-131 | 376 |
MS.gene31054.t1 | MTR_7g072480 | 57.006 | 314 | 133 | 1 | 9 | 322 | 5 | 316 | 6.60e-128 | 368 |
MS.gene31054.t1 | MTR_4g083710 | 59.177 | 316 | 125 | 4 | 11 | 322 | 9 | 324 | 5.45e-127 | 366 |
MS.gene31054.t1 | MTR_5g074860 | 58.750 | 320 | 124 | 5 | 6 | 320 | 7 | 323 | 1.44e-126 | 365 |
MS.gene31054.t1 | MTR_1g115900 | 57.827 | 313 | 125 | 5 | 11 | 319 | 9 | 318 | 3.53e-123 | 356 |
MS.gene31054.t1 | MTR_4g029170 | 55.836 | 317 | 135 | 4 | 9 | 322 | 7 | 321 | 3.10e-121 | 351 |
MS.gene31054.t1 | MTR_4g074995 | 57.547 | 318 | 119 | 4 | 8 | 322 | 4 | 308 | 1.29e-120 | 349 |
MS.gene31054.t1 | MTR_4g029200 | 55.556 | 297 | 130 | 1 | 26 | 322 | 44 | 338 | 3.06e-120 | 349 |
MS.gene31054.t1 | MTR_7g026990 | 55.556 | 306 | 132 | 3 | 15 | 319 | 17 | 319 | 3.18e-118 | 343 |
MS.gene31054.t1 | MTR_4g074990 | 55.911 | 313 | 120 | 4 | 13 | 322 | 8 | 305 | 6.69e-117 | 340 |
MS.gene31054.t1 | MTR_5g074760 | 55.312 | 320 | 131 | 6 | 12 | 322 | 5 | 321 | 3.96e-116 | 338 |
MS.gene31054.t1 | MTR_7g093370 | 53.560 | 323 | 137 | 6 | 10 | 322 | 52 | 371 | 5.05e-116 | 340 |
MS.gene31054.t1 | MTR_4g029190 | 53.947 | 304 | 139 | 1 | 20 | 322 | 37 | 340 | 6.34e-116 | 338 |
MS.gene31054.t1 | MTR_4g029180 | 57.143 | 294 | 122 | 3 | 31 | 322 | 30 | 321 | 9.45e-116 | 337 |
MS.gene31054.t1 | MTR_5g074710 | 54.890 | 317 | 135 | 5 | 11 | 322 | 8 | 321 | 1.20e-115 | 337 |
MS.gene31054.t1 | MTR_5g074740 | 56.051 | 314 | 130 | 5 | 14 | 322 | 11 | 321 | 1.23e-115 | 337 |
MS.gene31054.t1 | MTR_1g054205 | 52.308 | 325 | 140 | 6 | 10 | 322 | 5 | 326 | 1.94e-111 | 327 |
MS.gene31054.t1 | MTR_4g125940 | 52.174 | 322 | 139 | 5 | 12 | 322 | 12 | 329 | 9.19e-109 | 320 |
MS.gene31054.t1 | MTR_3g467600 | 50.920 | 326 | 151 | 5 | 4 | 322 | 1 | 324 | 1.12e-108 | 319 |
MS.gene31054.t1 | MTR_3g072190 | 61.508 | 252 | 95 | 1 | 71 | 322 | 2 | 251 | 3.43e-108 | 315 |
MS.gene31054.t1 | MTR_5g021060 | 51.155 | 303 | 138 | 3 | 28 | 322 | 30 | 330 | 9.86e-107 | 315 |
MS.gene31054.t1 | MTR_5g017850 | 50.784 | 319 | 145 | 4 | 11 | 322 | 13 | 326 | 5.73e-105 | 310 |
MS.gene31054.t1 | MTR_4g074980 | 52.381 | 315 | 123 | 4 | 9 | 322 | 6 | 294 | 1.21e-104 | 308 |
MS.gene31054.t1 | MTR_4g122640 | 51.171 | 299 | 142 | 2 | 28 | 322 | 38 | 336 | 8.63e-104 | 307 |
MS.gene31054.t1 | MTR_2g029815 | 50.000 | 316 | 147 | 3 | 12 | 318 | 13 | 326 | 5.18e-103 | 306 |
MS.gene31054.t1 | MTR_5g017860 | 50.314 | 318 | 147 | 4 | 14 | 322 | 11 | 326 | 1.88e-102 | 303 |
MS.gene31054.t1 | MTR_8g076820 | 49.839 | 311 | 146 | 3 | 17 | 319 | 19 | 327 | 3.21e-102 | 303 |
MS.gene31054.t1 | MTR_2g040000 | 49.699 | 332 | 149 | 6 | 5 | 322 | 4 | 331 | 5.65e-102 | 303 |
MS.gene31054.t1 | MTR_1g022970 | 50.000 | 304 | 141 | 3 | 28 | 322 | 46 | 347 | 1.76e-101 | 302 |
MS.gene31054.t1 | MTR_2g029750 | 51.592 | 314 | 141 | 4 | 14 | 318 | 15 | 326 | 2.14e-101 | 302 |
MS.gene31054.t1 | MTR_2g029800 | 49.226 | 323 | 149 | 4 | 9 | 318 | 6 | 326 | 7.55e-101 | 300 |
MS.gene31054.t1 | MTR_2g029560 | 50.162 | 309 | 143 | 4 | 19 | 318 | 15 | 321 | 4.98e-100 | 298 |
MS.gene31054.t1 | MTR_2g029860 | 49.850 | 333 | 153 | 5 | 1 | 322 | 1 | 330 | 1.38e-99 | 297 |
MS.gene31054.t1 | MTR_2g029820 | 47.531 | 324 | 155 | 4 | 8 | 318 | 5 | 326 | 8.18e-99 | 295 |
MS.gene31054.t1 | MTR_2g028980 | 51.118 | 313 | 142 | 4 | 15 | 318 | 16 | 326 | 8.83e-99 | 295 |
MS.gene31054.t1 | MTR_5g014100 | 50.000 | 306 | 136 | 4 | 28 | 319 | 26 | 328 | 2.96e-98 | 293 |
MS.gene31054.t1 | MTR_2g029740 | 48.765 | 324 | 151 | 5 | 8 | 318 | 5 | 326 | 3.33e-98 | 294 |
MS.gene31054.t1 | MTR_2g029830 | 49.836 | 305 | 142 | 3 | 23 | 318 | 23 | 325 | 2.65e-97 | 291 |
MS.gene31054.t1 | MTR_4g074980 | 58.468 | 248 | 101 | 2 | 9 | 254 | 6 | 253 | 3.95e-97 | 287 |
MS.gene31054.t1 | MTR_2g029910 | 46.914 | 324 | 158 | 4 | 8 | 318 | 6 | 328 | 5.39e-97 | 291 |
MS.gene31054.t1 | MTR_2g029730 | 49.515 | 309 | 145 | 3 | 19 | 318 | 16 | 322 | 3.33e-96 | 288 |
MS.gene31054.t1 | MTR_4g125940 | 55.235 | 277 | 109 | 5 | 57 | 322 | 2 | 274 | 3.36e-96 | 286 |
MS.gene31054.t1 | MTR_5g074860 | 50.000 | 320 | 113 | 7 | 6 | 320 | 7 | 284 | 6.78e-96 | 285 |
MS.gene31054.t1 | MTR_2g029850 | 48.297 | 323 | 152 | 4 | 9 | 318 | 6 | 326 | 6.78e-96 | 288 |
MS.gene31054.t1 | MTR_4g030890 | 45.955 | 309 | 155 | 4 | 21 | 322 | 93 | 396 | 6.65e-94 | 285 |
MS.gene31054.t1 | MTR_4g031140 | 44.444 | 324 | 164 | 5 | 10 | 322 | 6 | 324 | 1.05e-92 | 279 |
MS.gene31054.t1 | MTR_5g049280 | 44.695 | 311 | 160 | 5 | 23 | 322 | 28 | 337 | 6.19e-92 | 277 |
MS.gene31054.t1 | MTR_0155s0040 | 42.587 | 317 | 174 | 5 | 7 | 322 | 6 | 315 | 1.12e-86 | 263 |
MS.gene31054.t1 | MTR_1g077000 | 42.901 | 324 | 169 | 6 | 8 | 322 | 11 | 327 | 2.45e-85 | 260 |
MS.gene31054.t1 | MTR_4g046713 | 41.534 | 313 | 172 | 4 | 14 | 318 | 13 | 322 | 2.04e-84 | 258 |
MS.gene31054.t1 | MTR_7g029030 | 42.006 | 319 | 178 | 4 | 8 | 322 | 5 | 320 | 7.55e-84 | 256 |
MS.gene31054.t1 | MTR_2g088770 | 44.586 | 314 | 165 | 6 | 12 | 318 | 10 | 321 | 1.68e-82 | 253 |
MS.gene31054.t1 | MTR_1g101830 | 41.515 | 330 | 177 | 7 | 1 | 322 | 1 | 322 | 3.15e-80 | 247 |
MS.gene31054.t1 | MTR_1g025980 | 42.633 | 319 | 169 | 6 | 7 | 318 | 3 | 314 | 1.59e-79 | 245 |
MS.gene31054.t1 | MTR_3g092990 | 41.009 | 317 | 176 | 4 | 14 | 322 | 13 | 326 | 3.98e-79 | 244 |
MS.gene31054.t1 | MTR_7g107520 | 42.492 | 313 | 167 | 5 | 13 | 318 | 10 | 316 | 7.16e-79 | 243 |
MS.gene31054.t1 | MTR_5g022870 | 41.411 | 326 | 165 | 9 | 9 | 322 | 5 | 316 | 8.08e-78 | 240 |
MS.gene31054.t1 | MTR_2g029830 | 48.819 | 254 | 119 | 3 | 74 | 318 | 6 | 257 | 7.47e-77 | 237 |
MS.gene31054.t1 | MTR_4g114210 | 42.679 | 321 | 162 | 8 | 17 | 322 | 7 | 320 | 1.68e-76 | 237 |
MS.gene31054.t1 | MTR_8g075100 | 41.776 | 304 | 158 | 7 | 28 | 322 | 26 | 319 | 9.04e-75 | 233 |
MS.gene31054.t1 | MTR_7g086820 | 40.404 | 297 | 173 | 3 | 24 | 319 | 16 | 309 | 1.82e-74 | 232 |
MS.gene31054.t1 | MTR_2g008710 | 40.615 | 325 | 170 | 7 | 10 | 318 | 4 | 321 | 8.83e-73 | 228 |
MS.gene31054.t1 | MTR_6g043280 | 42.712 | 295 | 158 | 6 | 28 | 318 | 41 | 328 | 1.26e-72 | 228 |
MS.gene31054.t1 | MTR_6g027440 | 39.228 | 311 | 184 | 4 | 14 | 322 | 7 | 314 | 4.84e-72 | 226 |
MS.gene31054.t1 | MTR_6g043460 | 38.554 | 332 | 190 | 5 | 1 | 322 | 1 | 328 | 1.24e-70 | 223 |
MS.gene31054.t1 | MTR_1g086320 | 38.272 | 324 | 188 | 3 | 7 | 318 | 6 | 329 | 1.61e-70 | 222 |
MS.gene31054.t1 | MTR_4g132490 | 35.714 | 322 | 198 | 3 | 9 | 322 | 7 | 327 | 2.68e-69 | 219 |
MS.gene31054.t1 | MTR_1g038680 | 40.404 | 297 | 166 | 4 | 32 | 318 | 33 | 328 | 3.61e-69 | 219 |
MS.gene31054.t1 | MTR_3g072210 | 58.289 | 187 | 74 | 3 | 138 | 322 | 54 | 238 | 7.21e-69 | 215 |
MS.gene31054.t1 | MTR_3g092990 | 39.172 | 314 | 169 | 5 | 14 | 319 | 13 | 312 | 1.15e-68 | 217 |
MS.gene31054.t1 | MTR_1g009750 | 39.319 | 323 | 181 | 6 | 11 | 322 | 10 | 328 | 1.71e-68 | 217 |
MS.gene31054.t1 | MTR_2g437770 | 40.468 | 299 | 159 | 6 | 28 | 318 | 50 | 337 | 3.52e-68 | 216 |
MS.gene31054.t1 | MTR_5g016010 | 37.195 | 328 | 180 | 7 | 9 | 318 | 6 | 325 | 1.09e-67 | 215 |
MS.gene31054.t1 | MTR_4g095450 | 39.252 | 321 | 177 | 6 | 9 | 318 | 7 | 320 | 3.10e-67 | 213 |
MS.gene31054.t1 | MTR_4g087965 | 39.604 | 303 | 171 | 5 | 27 | 318 | 41 | 342 | 9.92e-67 | 213 |
MS.gene31054.t1 | MTR_2g067440 | 36.858 | 331 | 166 | 7 | 28 | 320 | 60 | 385 | 5.06e-66 | 213 |
MS.gene31054.t1 | MTR_2g008160 | 40.000 | 310 | 167 | 7 | 21 | 318 | 17 | 319 | 7.53e-66 | 210 |
MS.gene31054.t1 | MTR_1g086490 | 37.576 | 330 | 185 | 5 | 9 | 318 | 8 | 336 | 9.88e-66 | 210 |
MS.gene31054.t1 | MTR_1g090760 | 37.578 | 322 | 185 | 7 | 15 | 322 | 11 | 330 | 1.24e-65 | 210 |
MS.gene31054.t1 | MTR_7g086870 | 36.949 | 295 | 179 | 4 | 26 | 319 | 20 | 308 | 2.48e-65 | 208 |
MS.gene31054.t1 | MTR_2g099175 | 37.662 | 308 | 173 | 6 | 27 | 322 | 35 | 335 | 3.49e-64 | 206 |
MS.gene31054.t1 | MTR_2g077990 | 36.637 | 333 | 167 | 7 | 28 | 320 | 76 | 404 | 6.43e-64 | 207 |
MS.gene31054.t1 | MTR_4g133800 | 38.591 | 298 | 165 | 6 | 29 | 318 | 42 | 329 | 6.69e-64 | 205 |
MS.gene31054.t1 | MTR_5g074700 | 51.111 | 225 | 92 | 6 | 101 | 322 | 5 | 214 | 6.84e-64 | 201 |
MS.gene31054.t1 | MTR_0286s0010 | 37.152 | 323 | 184 | 6 | 14 | 322 | 17 | 334 | 4.36e-63 | 203 |
MS.gene31054.t1 | MTR_6g008075 | 37.152 | 323 | 184 | 6 | 14 | 322 | 17 | 334 | 4.36e-63 | 203 |
MS.gene31054.t1 | MTR_4g127670 | 39.610 | 308 | 167 | 7 | 27 | 322 | 23 | 323 | 4.52e-62 | 200 |
MS.gene31054.t1 | MTR_6g043240 | 36.562 | 320 | 183 | 7 | 11 | 318 | 16 | 327 | 5.40e-62 | 201 |
MS.gene31054.t1 | MTR_2g078610 | 35.758 | 330 | 174 | 6 | 28 | 320 | 76 | 404 | 8.07e-62 | 202 |
MS.gene31054.t1 | MTR_1g066710 | 35.505 | 307 | 180 | 6 | 26 | 322 | 25 | 323 | 3.72e-61 | 198 |
MS.gene31054.t1 | MTR_8g062780 | 36.190 | 315 | 193 | 5 | 11 | 318 | 7 | 320 | 7.81e-60 | 194 |
MS.gene31054.t1 | MTR_1g066380 | 35.294 | 306 | 182 | 5 | 26 | 322 | 25 | 323 | 1.03e-59 | 194 |
MS.gene31054.t1 | MTR_4g132110 | 35.238 | 315 | 197 | 5 | 9 | 318 | 12 | 324 | 1.30e-59 | 194 |
MS.gene31054.t1 | MTR_1g066640 | 35.294 | 306 | 182 | 5 | 26 | 322 | 25 | 323 | 1.33e-59 | 194 |
MS.gene31054.t1 | MTR_1g066680 | 34.884 | 301 | 183 | 7 | 26 | 319 | 25 | 319 | 1.54e-59 | 194 |
MS.gene31054.t1 | MTR_2g078280 | 36.449 | 321 | 160 | 8 | 28 | 308 | 76 | 392 | 2.48e-59 | 195 |
MS.gene31054.t1 | MTR_3g105790 | 36.890 | 328 | 178 | 6 | 13 | 322 | 6 | 322 | 4.31e-59 | 192 |
MS.gene31054.t1 | MTR_1g009750 | 37.224 | 317 | 171 | 7 | 11 | 318 | 10 | 307 | 9.48e-59 | 191 |
MS.gene31054.t1 | MTR_2g008730 | 37.231 | 325 | 157 | 7 | 10 | 318 | 4 | 297 | 3.44e-58 | 189 |
MS.gene31054.t1 | MTR_7g072490 | 44.215 | 242 | 79 | 2 | 74 | 315 | 2 | 187 | 5.36e-58 | 186 |
MS.gene31054.t1 | MTR_4g132110 | 34.688 | 320 | 197 | 6 | 9 | 318 | 12 | 329 | 2.17e-57 | 189 |
MS.gene31054.t1 | MTR_2g008160 | 37.829 | 304 | 147 | 8 | 21 | 318 | 17 | 284 | 1.70e-54 | 179 |
MS.gene31054.t1 | MTR_0147s0010 | 32.710 | 321 | 177 | 5 | 25 | 320 | 74 | 380 | 2.97e-53 | 179 |
MS.gene31054.t1 | MTR_5g033470 | 35.826 | 321 | 176 | 8 | 22 | 322 | 67 | 377 | 5.00e-53 | 178 |
MS.gene31054.t1 | MTR_2g067450 | 35.314 | 303 | 181 | 6 | 28 | 320 | 11 | 308 | 2.35e-49 | 167 |
MS.gene31054.t1 | MTR_3g072260 | 61.719 | 128 | 40 | 2 | 17 | 135 | 6 | 133 | 3.57e-45 | 150 |
MS.gene31054.t1 | MTR_1g066380 | 34.100 | 261 | 154 | 6 | 72 | 322 | 3 | 255 | 2.77e-43 | 149 |
MS.gene31054.t1 | MTR_2g008160 | 44.633 | 177 | 94 | 3 | 21 | 197 | 17 | 189 | 6.52e-43 | 147 |
MS.gene31054.t1 | MTR_3g105790 | 38.430 | 242 | 128 | 3 | 95 | 322 | 12 | 246 | 8.03e-42 | 145 |
MS.gene31054.t1 | MTR_2g029880 | 42.553 | 188 | 87 | 4 | 140 | 318 | 9 | 184 | 2.64e-39 | 138 |
MS.gene31054.t1 | MTR_2g077980 | 29.474 | 285 | 154 | 8 | 80 | 320 | 1 | 282 | 3.81e-28 | 110 |
MS.gene31054.t1 | MTR_5g074770 | 51.546 | 97 | 44 | 2 | 226 | 320 | 12 | 107 | 1.02e-25 | 99.4 |
MS.gene31054.t1 | MTR_2g078560 | 30.275 | 218 | 116 | 4 | 137 | 318 | 99 | 316 | 2.78e-24 | 100 |
MS.gene31054.t1 | MTR_7g086790 | 43.333 | 120 | 64 | 2 | 75 | 194 | 17 | 132 | 5.35e-24 | 97.4 |
MS.gene31054.t1 | MTR_3g462850 | 38.732 | 142 | 75 | 5 | 192 | 322 | 9 | 149 | 1.09e-23 | 95.1 |
MS.gene31054.t1 | MTR_4g114220 | 42.029 | 138 | 56 | 4 | 45 | 174 | 20 | 141 | 3.36e-23 | 93.6 |
MS.gene31054.t1 | MTR_4g031040 | 35.673 | 171 | 71 | 4 | 89 | 259 | 3 | 134 | 3.95e-23 | 93.2 |
MS.gene31054.t1 | MTR_5g058120 | 36.250 | 160 | 92 | 3 | 164 | 321 | 7 | 158 | 5.98e-23 | 95.9 |
MS.gene31054.t1 | MTR_1g089005 | 40.580 | 138 | 69 | 3 | 14 | 139 | 1 | 137 | 8.41e-22 | 90.5 |
MS.gene31054.t1 | MTR_3g107060 | 28.102 | 274 | 128 | 10 | 43 | 301 | 91 | 310 | 2.40e-21 | 92.8 |
MS.gene31054.t1 | MTR_1g098320 | 47.368 | 76 | 40 | 0 | 243 | 318 | 45 | 120 | 2.89e-18 | 80.5 |
MS.gene31054.t1 | MTR_6g048160 | 52.778 | 72 | 30 | 2 | 67 | 138 | 22 | 89 | 1.38e-17 | 77.0 |
MS.gene31054.t1 | MTR_7g107500 | 47.500 | 80 | 41 | 1 | 239 | 318 | 15 | 93 | 9.04e-17 | 75.1 |
MS.gene31054.t1 | MTR_2g029930 | 39.216 | 102 | 34 | 3 | 24 | 111 | 15 | 102 | 3.48e-16 | 73.6 |
MS.gene31054.t1 | MTR_5g022510 | 26.449 | 276 | 138 | 12 | 44 | 304 | 17 | 242 | 8.60e-16 | 76.6 |
MS.gene31054.t1 | MTR_4g073410 | 25.692 | 253 | 134 | 9 | 62 | 304 | 35 | 243 | 7.09e-15 | 73.9 |
MS.gene31054.t1 | MTR_0147s0040 | 41.892 | 74 | 43 | 0 | 247 | 320 | 8 | 81 | 5.14e-14 | 67.0 |
MS.gene31054.t1 | MTR_7g086810 | 31.967 | 122 | 57 | 1 | 24 | 145 | 2 | 97 | 9.27e-14 | 70.1 |
MS.gene31054.t1 | MTR_7g086785 | 45.833 | 72 | 38 | 1 | 74 | 145 | 4 | 74 | 9.34e-13 | 65.1 |
MS.gene31054.t1 | MTR_4g012865 | 36.620 | 71 | 45 | 0 | 25 | 95 | 74 | 144 | 2.18e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31054.t1 | AT5G05340 | 74.747 | 297 | 75 | 0 | 26 | 322 | 28 | 324 | 6.65e-164 | 459 |
MS.gene31054.t1 | AT5G58400 | 62.939 | 313 | 114 | 2 | 12 | 322 | 13 | 325 | 5.26e-144 | 409 |
MS.gene31054.t1 | AT5G58390 | 60.635 | 315 | 123 | 1 | 9 | 322 | 2 | 316 | 5.35e-136 | 389 |
MS.gene31054.t1 | AT1G14550 | 55.128 | 312 | 133 | 5 | 12 | 318 | 8 | 317 | 2.27e-118 | 344 |
MS.gene31054.t1 | AT5G06720 | 52.134 | 328 | 145 | 4 | 5 | 322 | 8 | 333 | 2.77e-116 | 339 |
MS.gene31054.t1 | AT1G14540 | 53.698 | 311 | 140 | 3 | 14 | 322 | 7 | 315 | 9.62e-115 | 335 |
MS.gene31054.t1 | AT5G06730 | 50.305 | 328 | 151 | 5 | 5 | 322 | 9 | 334 | 1.42e-111 | 328 |
MS.gene31054.t1 | AT2G18150 | 46.291 | 337 | 158 | 4 | 7 | 322 | 2 | 336 | 7.01e-108 | 318 |
MS.gene31054.t1 | AT4G36430 | 49.527 | 317 | 150 | 3 | 14 | 322 | 16 | 330 | 8.80e-108 | 317 |
MS.gene31054.t1 | AT2G18140 | 48.387 | 310 | 150 | 3 | 21 | 322 | 28 | 335 | 9.81e-105 | 310 |
MS.gene31054.t1 | AT1G44970 | 52.104 | 309 | 137 | 3 | 20 | 319 | 37 | 343 | 2.85e-104 | 309 |
MS.gene31054.t1 | AT3G50990 | 50.000 | 330 | 147 | 6 | 9 | 322 | 14 | 341 | 4.75e-102 | 303 |
MS.gene31054.t1 | AT5G66390 | 49.505 | 303 | 143 | 3 | 28 | 322 | 33 | 333 | 5.42e-102 | 303 |
MS.gene31054.t1 | AT4G08770 | 50.160 | 313 | 143 | 4 | 21 | 322 | 17 | 327 | 3.16e-100 | 299 |
MS.gene31054.t1 | AT4G08780 | 48.710 | 310 | 146 | 4 | 24 | 322 | 20 | 327 | 4.16e-99 | 296 |
MS.gene31054.t1 | AT5G19890 | 48.615 | 325 | 145 | 7 | 9 | 322 | 14 | 327 | 8.60e-99 | 294 |
MS.gene31054.t1 | AT5G19880 | 46.933 | 326 | 156 | 5 | 9 | 322 | 9 | 329 | 1.33e-98 | 294 |
MS.gene31054.t1 | AT4G16270 | 49.508 | 305 | 138 | 5 | 28 | 322 | 50 | 348 | 1.07e-97 | 292 |
MS.gene31054.t1 | AT1G49570 | 49.180 | 305 | 145 | 3 | 26 | 321 | 46 | 349 | 1.50e-97 | 292 |
MS.gene31054.t1 | AT2G38390 | 47.112 | 329 | 162 | 5 | 4 | 322 | 7 | 333 | 7.68e-97 | 290 |
MS.gene31054.t1 | AT2G35380 | 48.254 | 315 | 150 | 4 | 20 | 322 | 22 | 335 | 1.17e-96 | 289 |
MS.gene31054.t1 | AT2G22420 | 45.201 | 323 | 165 | 4 | 7 | 322 | 2 | 319 | 1.61e-96 | 289 |
MS.gene31054.t1 | AT3G32980 | 47.531 | 324 | 157 | 4 | 10 | 322 | 13 | 334 | 9.74e-96 | 287 |
MS.gene31054.t1 | AT2G38380 | 46.505 | 329 | 164 | 5 | 4 | 322 | 7 | 333 | 1.98e-94 | 284 |
MS.gene31054.t1 | AT3G49110 | 47.003 | 317 | 155 | 4 | 17 | 322 | 22 | 336 | 6.65e-93 | 280 |
MS.gene31054.t1 | AT1G68850 | 43.421 | 304 | 159 | 4 | 28 | 319 | 30 | 332 | 1.52e-92 | 279 |
MS.gene31054.t1 | AT3G49120 | 46.130 | 323 | 161 | 4 | 11 | 322 | 15 | 335 | 3.95e-92 | 278 |
MS.gene31054.t1 | AT3G01190 | 41.463 | 328 | 176 | 7 | 4 | 322 | 1 | 321 | 7.07e-83 | 253 |
MS.gene31054.t1 | AT5G15180 | 40.557 | 323 | 176 | 7 | 11 | 322 | 12 | 329 | 2.77e-80 | 247 |
MS.gene31054.t1 | AT1G05260 | 41.566 | 332 | 174 | 8 | 4 | 322 | 1 | 325 | 5.60e-79 | 244 |
MS.gene31054.t1 | AT4G33420 | 42.320 | 319 | 173 | 8 | 8 | 322 | 14 | 325 | 6.34e-78 | 241 |
MS.gene31054.t1 | AT4G33420 | 42.320 | 319 | 173 | 8 | 8 | 322 | 61 | 372 | 4.49e-77 | 240 |
MS.gene31054.t1 | AT5G42180 | 41.176 | 323 | 165 | 7 | 11 | 320 | 5 | 315 | 8.77e-77 | 238 |
MS.gene31054.t1 | AT5G14130 | 39.623 | 318 | 180 | 4 | 9 | 318 | 13 | 326 | 1.05e-76 | 238 |
MS.gene31054.t1 | AT3G21770 | 40.260 | 308 | 171 | 6 | 20 | 318 | 21 | 324 | 1.21e-76 | 238 |
MS.gene31054.t1 | AT5G51890 | 38.580 | 324 | 186 | 6 | 4 | 319 | 1 | 319 | 3.05e-76 | 236 |
MS.gene31054.t1 | AT5G14130 | 39.623 | 318 | 180 | 4 | 9 | 318 | 54 | 367 | 3.05e-76 | 238 |
MS.gene31054.t1 | AT1G71695 | 42.140 | 299 | 166 | 4 | 28 | 322 | 44 | 339 | 1.52e-75 | 236 |
MS.gene31054.t1 | AT2G41480 | 40.867 | 323 | 170 | 9 | 14 | 322 | 13 | 328 | 1.57e-75 | 235 |
MS.gene31054.t1 | AT5G64120 | 42.953 | 298 | 155 | 6 | 32 | 322 | 39 | 328 | 2.42e-75 | 234 |
MS.gene31054.t1 | AT4G11290 | 40.308 | 325 | 176 | 7 | 9 | 318 | 1 | 322 | 4.37e-75 | 234 |
MS.gene31054.t1 | AT5G17820 | 39.748 | 317 | 172 | 5 | 13 | 322 | 9 | 313 | 9.00e-75 | 233 |
MS.gene31054.t1 | AT3G03670 | 40.491 | 326 | 177 | 5 | 8 | 322 | 2 | 321 | 9.23e-75 | 233 |
MS.gene31054.t1 | AT5G17820 | 39.748 | 317 | 172 | 5 | 13 | 322 | 62 | 366 | 8.96e-74 | 232 |
MS.gene31054.t1 | AT2G35380 | 49.796 | 245 | 110 | 4 | 90 | 322 | 4 | 247 | 1.25e-71 | 222 |
MS.gene31054.t1 | AT1G05240 | 38.961 | 308 | 167 | 6 | 28 | 322 | 26 | 325 | 1.29e-71 | 225 |
MS.gene31054.t1 | AT1G05250 | 38.961 | 308 | 167 | 6 | 28 | 322 | 26 | 325 | 1.29e-71 | 225 |
MS.gene31054.t1 | AT4G37530 | 39.936 | 313 | 166 | 5 | 21 | 318 | 20 | 325 | 3.29e-70 | 221 |
MS.gene31054.t1 | AT5G47000 | 38.924 | 316 | 184 | 5 | 9 | 318 | 14 | 326 | 2.46e-69 | 219 |
MS.gene31054.t1 | AT3G28200 | 39.535 | 301 | 173 | 4 | 23 | 318 | 16 | 312 | 6.12e-69 | 218 |
MS.gene31054.t1 | AT4G26010 | 40.000 | 305 | 174 | 5 | 16 | 319 | 10 | 306 | 6.43e-69 | 218 |
MS.gene31054.t1 | AT2G18980 | 39.692 | 325 | 174 | 8 | 12 | 322 | 7 | 323 | 8.74e-69 | 218 |
MS.gene31054.t1 | AT4G17690 | 40.264 | 303 | 175 | 4 | 20 | 318 | 18 | 318 | 1.25e-68 | 217 |
MS.gene31054.t1 | AT4G37520 | 38.961 | 308 | 166 | 5 | 26 | 318 | 25 | 325 | 1.53e-68 | 217 |
MS.gene31054.t1 | AT1G34510 | 39.806 | 309 | 175 | 7 | 16 | 322 | 10 | 309 | 1.56e-68 | 216 |
MS.gene31054.t1 | AT4G26010 | 40.000 | 305 | 174 | 5 | 16 | 319 | 38 | 334 | 1.71e-68 | 217 |
MS.gene31054.t1 | AT1G77100 | 41.538 | 325 | 171 | 10 | 11 | 322 | 1 | 319 | 1.92e-68 | 216 |
MS.gene31054.t1 | AT5G40150 | 38.816 | 304 | 172 | 5 | 23 | 318 | 27 | 324 | 2.91e-68 | 216 |
MS.gene31054.t1 | AT4G30170 | 40.453 | 309 | 166 | 7 | 25 | 322 | 24 | 325 | 2.57e-67 | 214 |
MS.gene31054.t1 | AT1G24110 | 37.267 | 322 | 188 | 6 | 12 | 322 | 4 | 322 | 3.04e-67 | 214 |
MS.gene31054.t1 | AT4G37520 | 39.610 | 308 | 161 | 7 | 26 | 318 | 25 | 322 | 3.98e-67 | 213 |
MS.gene31054.t1 | AT4G33870 | 34.731 | 334 | 175 | 4 | 28 | 320 | 68 | 399 | 1.04e-66 | 215 |
MS.gene31054.t1 | AT1G30870 | 39.016 | 305 | 166 | 6 | 28 | 322 | 51 | 345 | 1.13e-66 | 213 |
MS.gene31054.t1 | AT4G25980 | 37.500 | 320 | 180 | 7 | 12 | 318 | 10 | 322 | 3.75e-66 | 211 |
MS.gene31054.t1 | AT3G49960 | 37.651 | 332 | 179 | 7 | 7 | 318 | 2 | 325 | 5.18e-66 | 211 |
MS.gene31054.t1 | AT5G67400 | 38.110 | 328 | 183 | 7 | 7 | 318 | 2 | 325 | 5.29e-66 | 211 |
MS.gene31054.t1 | AT5G39580 | 39.375 | 320 | 178 | 8 | 12 | 322 | 7 | 319 | 1.28e-64 | 207 |
MS.gene31054.t1 | AT4G21960 | 37.086 | 302 | 184 | 4 | 21 | 318 | 24 | 323 | 4.55e-64 | 206 |
MS.gene31054.t1 | AT2G34060 | 40.391 | 307 | 169 | 7 | 25 | 319 | 39 | 343 | 4.78e-64 | 206 |
MS.gene31054.t1 | AT4G31760 | 35.976 | 328 | 193 | 4 | 4 | 322 | 7 | 326 | 1.04e-63 | 204 |
MS.gene31054.t1 | AT2G24800 | 38.235 | 306 | 175 | 3 | 26 | 322 | 29 | 329 | 2.91e-63 | 204 |
MS.gene31054.t1 | AT2G39040 | 39.297 | 313 | 176 | 7 | 22 | 322 | 40 | 350 | 9.21e-63 | 203 |
MS.gene31054.t1 | AT5G64100 | 36.364 | 330 | 178 | 7 | 11 | 318 | 8 | 327 | 2.10e-60 | 196 |
MS.gene31054.t1 | AT4G37530 | 40.602 | 266 | 136 | 5 | 21 | 271 | 20 | 278 | 8.36e-60 | 193 |
MS.gene31054.t1 | AT5G64110 | 38.462 | 325 | 173 | 8 | 12 | 318 | 11 | 326 | 5.10e-59 | 192 |
MS.gene31054.t1 | AT2G37130 | 34.304 | 309 | 194 | 5 | 20 | 322 | 22 | 327 | 6.44e-58 | 190 |
MS.gene31054.t1 | AT3G17070 | 35.802 | 324 | 188 | 8 | 14 | 320 | 17 | 337 | 1.66e-57 | 189 |
MS.gene31054.t1 | AT2G37130 | 34.564 | 298 | 186 | 5 | 31 | 322 | 2 | 296 | 2.15e-56 | 185 |
MS.gene31054.t1 | AT2G43480 | 33.962 | 318 | 188 | 7 | 19 | 322 | 26 | 335 | 6.86e-55 | 182 |
MS.gene31054.t1 | AT5G22410 | 35.276 | 326 | 189 | 10 | 7 | 319 | 6 | 322 | 1.41e-54 | 181 |
MS.gene31054.t1 | AT5G24070 | 34.405 | 311 | 182 | 7 | 26 | 322 | 33 | 335 | 5.47e-54 | 180 |
MS.gene31054.t1 | AT3G17070 | 34.483 | 261 | 157 | 7 | 70 | 320 | 18 | 274 | 6.74e-42 | 147 |
MS.gene31054.t1 | AT4G25980 | 42.077 | 183 | 102 | 3 | 13 | 195 | 56 | 234 | 7.25e-42 | 147 |
MS.gene31054.t1 | AT5G39580 | 37.662 | 231 | 133 | 5 | 12 | 240 | 7 | 228 | 1.52e-41 | 144 |
MS.gene31054.t1 | AT2G24800 | 41.667 | 168 | 94 | 1 | 26 | 193 | 29 | 192 | 2.01e-35 | 129 |
MS.gene31054.t1 | AT4G32320 | 29.137 | 278 | 128 | 8 | 39 | 301 | 96 | 319 | 4.44e-23 | 97.8 |
MS.gene31054.t1 | AT1G77490 | 25.769 | 260 | 150 | 8 | 62 | 304 | 106 | 339 | 1.71e-16 | 80.1 |
MS.gene31054.t1 | AT1G77490 | 25.769 | 260 | 150 | 8 | 62 | 304 | 106 | 339 | 2.51e-16 | 79.7 |
MS.gene31054.t1 | AT3G42570 | 35.052 | 97 | 62 | 1 | 100 | 195 | 53 | 149 | 1.47e-14 | 70.5 |
Find 79 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCTATTTCTCCTCATAAT+AGG | 0.184669 | 3.3:+78599765 | MS.gene31054:CDS |
TCCCCTGATCCTGATGTCTT+TGG | 0.225606 | 3.3:-78604461 | None:intergenic |
AAGCAAGGTGCACAACATTT+AGG | 0.229716 | 3.3:+78604375 | MS.gene31054:CDS |
GTTAATCTAGAACAACTTAA+AGG | 0.237686 | 3.3:-78599729 | None:intergenic |
AGAGAGTTTGGGACAAGTTT+TGG | 0.254499 | 3.3:-78599823 | None:intergenic |
TTGGACAATGGAAGAGAGTT+TGG | 0.300332 | 3.3:-78599835 | None:intergenic |
TTCTATTTCTCCTCATAATA+GGG | 0.333578 | 3.3:+78599766 | MS.gene31054:CDS |
CCCCTGATCCTGATGTCTTT+GGG | 0.343878 | 3.3:-78604460 | None:intergenic |
AGGATCAGGGGACAATAATT+TGG | 0.345432 | 3.3:+78604472 | MS.gene31054:CDS |
ACATTGAGGTGAGTACATTA+AGG | 0.355998 | 3.3:-78603683 | None:intergenic |
CCTCGAACAGAGTTCCTATT+CGG | 0.365116 | 3.3:-78603331 | None:intergenic |
TTCAAACTTAAATATTAGTT+AGG | 0.366105 | 3.3:-78604740 | None:intergenic |
TAGATTAACAATGTTCAGTT+TGG | 0.377384 | 3.3:+78599743 | MS.gene31054:CDS |
AGCAAGGTGCACAACATTTA+GGG | 0.388383 | 3.3:+78604376 | MS.gene31054:CDS |
GATAGCTTGGTGGCCCAAAC+TGG | 0.400625 | 3.3:+78603580 | MS.gene31054:intron |
TGACTAGGTGCTCACACAAT+TGG | 0.411685 | 3.3:+78604350 | MS.gene31054:intron |
CTCGAACAGAGTTCCTATTC+GGG | 0.444608 | 3.3:-78603330 | None:intergenic |
TGGACAATGGAAGAGAGTTT+GGG | 0.453796 | 3.3:-78599834 | None:intergenic |
TGCCCAAAGACATCAGGATC+AGG | 0.457132 | 3.3:+78604458 | MS.gene31054:CDS |
TCGATATAGCGGATTGCACT+TGG | 0.458106 | 3.3:-78599860 | None:intergenic |
AGAAGAACGCACTCCCGAAT+AGG | 0.461469 | 3.3:+78603317 | MS.gene31054:CDS |
AAGCCACTCACTGGATCAAA+TGG | 0.464847 | 3.3:+78604692 | MS.gene31054:CDS |
AAGGACTTAGTCGCATTGTC+AGG | 0.466819 | 3.3:+78603729 | MS.gene31054:CDS |
ACCTCAATGTTTAAGAATGT+TGG | 0.473954 | 3.3:+78603696 | MS.gene31054:CDS |
TACTATACATGATAGCTTGG+TGG | 0.475715 | 3.3:+78603570 | MS.gene31054:intron |
TAGCGGATTGCACTTGGCGT+TGG | 0.477054 | 3.3:-78599854 | None:intergenic |
AATTTGATGTGTCATCTAGT+AGG | 0.477448 | 3.3:-78603285 | None:intergenic |
TCAGCACATGATACAACTCC+TGG | 0.479117 | 3.3:-78603400 | None:intergenic |
TATATCGAAGGAGGCACGAA+TGG | 0.486600 | 3.3:+78599875 | MS.gene31054:CDS |
ACCCGCCGTTGAAAAGTTGT+TGG | 0.489526 | 3.3:-78604580 | None:intergenic |
TTAAGGTTGGAAGTTGGTGC+TGG | 0.495278 | 3.3:-78603666 | None:intergenic |
CATTGGCACTCCCTATTATG+AGG | 0.497408 | 3.3:-78599776 | None:intergenic |
TCTAATTGCCCAAAGACATC+AGG | 0.499580 | 3.3:+78604452 | MS.gene31054:CDS |
TTGCAATTATAGGGGTGCGA+TGG | 0.506694 | 3.3:+78603256 | MS.gene31054:intron |
TGCCACTGCTATGATCAAGA+TGG | 0.506761 | 3.3:+78604661 | MS.gene31054:CDS |
CGGGAGTGCGTTCTTCTCTC+CGG | 0.514629 | 3.3:-78603311 | None:intergenic |
GCCACTCACTATTGAGTTGG+TGG | 0.515724 | 3.3:-78604603 | None:intergenic |
GGAGATATTAAGCCACTCAC+TGG | 0.517383 | 3.3:+78604683 | MS.gene31054:CDS |
TGCAATTATAGGGGTGCGAT+GGG | 0.518318 | 3.3:+78603257 | MS.gene31054:intron |
GCCACTGCTATGATCAAGAT+GGG | 0.523834 | 3.3:+78604662 | MS.gene31054:CDS |
TGAGGTGAGTACATTAAGGT+TGG | 0.527335 | 3.3:-78603679 | None:intergenic |
CCAAACTGGAATGTAAAACT+TGG | 0.529320 | 3.3:+78603594 | MS.gene31054:CDS |
ACCAACATTCTTAAACATTG+AGG | 0.529518 | 3.3:-78603697 | None:intergenic |
CAGGAACCTTGTTCAAAACA+AGG | 0.532745 | 3.3:+78604541 | MS.gene31054:CDS |
GTTTGTAGAGAGTTGTGCAT+TGG | 0.533430 | 3.3:-78599793 | None:intergenic |
TTGCACTTGGCGTTGGACAA+TGG | 0.534086 | 3.3:-78599847 | None:intergenic |
CCGAATAGGAACTCTGTTCG+AGG | 0.537065 | 3.3:+78603331 | MS.gene31054:CDS |
TACAATTGCAACAGAGTATG+TGG | 0.537794 | 3.3:-78603440 | None:intergenic |
TGACAATGCGACTAAGTCCT+TGG | 0.546126 | 3.3:-78603727 | None:intergenic |
GTTGGAAGTTGGTGCTGGGA+TGG | 0.546874 | 3.3:-78603661 | None:intergenic |
AGCAAAAGAAGTATCTATGT+TGG | 0.550553 | 3.3:-78604417 | None:intergenic |
ATATCGAAGGAGGCACGAAT+GGG | 0.556566 | 3.3:+78599876 | MS.gene31054:CDS |
GCCGTAGAGAACATATGTCC+AGG | 0.557511 | 3.3:+78603382 | MS.gene31054:CDS |
GCCCAAAGACATCAGGATCA+GGG | 0.561189 | 3.3:+78604459 | MS.gene31054:CDS |
AGTACATTAAGGTTGGAAGT+TGG | 0.561812 | 3.3:-78603672 | None:intergenic |
TCCTGGACATATGTTCTCTA+CGG | 0.565428 | 3.3:-78603383 | None:intergenic |
CAATGCGACTAAGTCCTTGG+TGG | 0.565757 | 3.3:-78603724 | None:intergenic |
TAGCAGTTGTCAAAAGAAGT+GGG | 0.571172 | 3.3:-78604515 | None:intergenic |
AACAGAGTATGTGGCAGCAA+TGG | 0.575576 | 3.3:-78603431 | None:intergenic |
ATAGCCACTCACTATTGAGT+TGG | 0.580124 | 3.3:-78604606 | None:intergenic |
AGTATGTGGCAGCAATGGCT+AGG | 0.591350 | 3.3:-78603426 | None:intergenic |
TCTCCATTTGATCCAGTGAG+TGG | 0.599035 | 3.3:-78604695 | None:intergenic |
GTAGCAGTTGTCAAAAGAAG+TGG | 0.602615 | 3.3:-78604516 | None:intergenic |
TCGTGCCTCCTTCGATATAG+CGG | 0.602634 | 3.3:-78599871 | None:intergenic |
CTCACACAATTGGACAAGCA+AGG | 0.617199 | 3.3:+78604360 | MS.gene31054:CDS |
AGCAATCGTGGAAGAACAAG+CGG | 0.622282 | 3.3:-78599911 | None:intergenic |
GAATGTTGGTCTTTCCACCA+AGG | 0.624861 | 3.3:+78603710 | MS.gene31054:CDS |
AGCAGATTGACTAGCAGTCG+TGG | 0.628218 | 3.3:-78603628 | None:intergenic |
TAAGGTTGGAAGTTGGTGCT+GGG | 0.629361 | 3.3:-78603665 | None:intergenic |
TCCCATCTTGATCATAGCAG+TGG | 0.630222 | 3.3:-78604663 | None:intergenic |
AGTGCAATCCGCTATATCGA+AGG | 0.633823 | 3.3:+78599863 | MS.gene31054:CDS |
CCCAAAGACATCAGGATCAG+GGG | 0.634254 | 3.3:+78604460 | MS.gene31054:CDS |
AGCAGTTGTCAAAAGAAGTG+GGG | 0.647889 | 3.3:-78604514 | None:intergenic |
GCAATCCGCTATATCGAAGG+AGG | 0.656146 | 3.3:+78599866 | MS.gene31054:CDS |
GCAGTTGTCAAAAGAAGTGG+GGG | 0.658009 | 3.3:-78604513 | None:intergenic |
AGGAACCTTGTTCAAAACAA+GGG | 0.662588 | 3.3:+78604542 | MS.gene31054:CDS |
TTACATTGACAAAGCAATCG+TGG | 0.667907 | 3.3:-78599923 | None:intergenic |
TCCACCAACTCAATAGTGAG+TGG | 0.672331 | 3.3:+78604602 | MS.gene31054:CDS |
AATCGTGGAAGAACAAGCGG+AGG | 0.704179 | 3.3:-78599908 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAAATATTGAGAATAA+TGG | + | chr3.3:78602564-78602583 | MS.gene31054:intron | 10.0% |
!! | ATCATAAATAAAATATTTAG+TGG | + | chr3.3:78602462-78602481 | MS.gene31054:intron | 10.0% |
!! | GTTATTTGTATTAAAAATTA+AGG | - | chr3.3:78601083-78601102 | None:intergenic | 10.0% |
!! | TACTTAAATATAATTTAAAC+CGG | + | chr3.3:78600486-78600505 | MS.gene31054:intron | 10.0% |
!! | TATAACATAAAAGATTAAAT+CGG | - | chr3.3:78603955-78603974 | None:intergenic | 10.0% |
!!! | GATTTTTTTTAATGAAATTT+GGG | + | chr3.3:78604004-78604023 | MS.gene31054:intron | 10.0% |
!!! | TAGTTCATTTAATAAATTTT+AGG | - | chr3.3:78600141-78600160 | None:intergenic | 10.0% |
!! | AAAAAAAAAAATGATATGCA+AGG | + | chr3.3:78600942-78600961 | MS.gene31054:intron | 15.0% |
!! | AAAAATTAAAATTAACATGC+CGG | + | chr3.3:78600542-78600561 | MS.gene31054:intron | 15.0% |
!! | AACAATTATGAAAATTAACA+TGG | + | chr3.3:78601879-78601898 | MS.gene31054:intron | 15.0% |
!! | AATTGTGTTCAAAAAATATA+TGG | - | chr3.3:78599983-78600002 | None:intergenic | 15.0% |
!! | ATATATTACTTGCAATTATA+GGG | + | chr3.3:78603247-78603266 | MS.gene31054:intron | 15.0% |
!! | ATATTAATATGATGAAGATT+TGG | + | chr3.3:78604032-78604051 | MS.gene31054:intron | 15.0% |
!! | ATTAATCAATTTACATTTCA+TGG | - | chr3.3:78603528-78603547 | None:intergenic | 15.0% |
!! | ATTATGGAAAAAAATGTTTA+AGG | - | chr3.3:78601255-78601274 | None:intergenic | 15.0% |
!! | GTTACATAATTATAACATAA+AGG | - | chr3.3:78603905-78603924 | None:intergenic | 15.0% |
!! | TAATTGTCAAATAACTAATT+TGG | + | chr3.3:78604314-78604333 | MS.gene31054:intron | 15.0% |
!! | TATATATTACTTGCAATTAT+AGG | + | chr3.3:78603246-78603265 | MS.gene31054:intron | 15.0% |
!! | TTAAAAAAAATCCCATAAAA+AGG | - | chr3.3:78603996-78604015 | None:intergenic | 15.0% |
!! | TTATGGAAAAAAATGTTTAA+GGG | - | chr3.3:78601254-78601273 | None:intergenic | 15.0% |
!! | TTATTATTTCAACTTATTCT+AGG | - | chr3.3:78600196-78600215 | None:intergenic | 15.0% |
!! | TTCTTTCAAAAAAAATTAAG+TGG | - | chr3.3:78602066-78602085 | None:intergenic | 15.0% |
!!! | GCATATCATTTTTTTTTTTT+TGG | - | chr3.3:78600941-78600960 | None:intergenic | 15.0% |
!!! | GGATTTTTTTTAATGAAATT+TGG | + | chr3.3:78604003-78604022 | MS.gene31054:intron | 15.0% |
!!! | TACTAGCTATTTTTTTTTAA+AGG | - | chr3.3:78600896-78600915 | None:intergenic | 15.0% |
!!! | TATTTTATTTTTTATGCATG+TGG | - | chr3.3:78601911-78601930 | None:intergenic | 15.0% |
!!! | TGTTCTTTTTAAATATAATC+CGG | - | chr3.3:78600564-78600583 | None:intergenic | 15.0% |
!!! | TTAAAAATTAAGGGTATTTT+TGG | - | chr3.3:78601073-78601092 | None:intergenic | 15.0% |
!!! | TTGATTGTAGTATATTTTTT+CGG | + | chr3.3:78600009-78600028 | MS.gene31054:intron | 15.0% |
!!! | TTTAATAAAAGTACCTATTA+AGG | + | chr3.3:78602812-78602831 | MS.gene31054:intron | 15.0% |
!!! | TTTATTACTTTTTTAAACGT+GGG | + | chr3.3:78603054-78603073 | MS.gene31054:intron | 15.0% |
!!! | TTTTATTACTTTTTTAAACG+TGG | + | chr3.3:78603053-78603072 | MS.gene31054:intron | 15.0% |
!! | AACGTTAAATGAATATATAG+CGG | + | chr3.3:78602152-78602171 | MS.gene31054:intron | 20.0% |
!! | ACATTTCAAGATATTAACTT+CGG | - | chr3.3:78601786-78601805 | None:intergenic | 20.0% |
!! | ATGTATATGTGACTTAAAAT+TGG | + | chr3.3:78601802-78601821 | MS.gene31054:intron | 20.0% |
!! | TAAAAATTAATCTCTCAAAC+CGG | - | chr3.3:78600827-78600846 | None:intergenic | 20.0% |
!! | TAATAGACAATTGTCAATAA+AGG | - | chr3.3:78600446-78600465 | None:intergenic | 20.0% |
!! | TATAACATAAAGGATGAAAT+CGG | - | chr3.3:78603895-78603914 | None:intergenic | 20.0% |
!! | TATATTACTTGCAATTATAG+GGG | + | chr3.3:78603248-78603267 | MS.gene31054:intron | 20.0% |
!! | TATGAAAATTAACATGGAAA+AGG | + | chr3.3:78601885-78601904 | MS.gene31054:intron | 20.0% |
!! | TCCATAATAAAAATTGTTGT+TGG | + | chr3.3:78601267-78601286 | MS.gene31054:intron | 20.0% |
!! | TCGAAAAAAGAAAAAGATAA+AGG | + | chr3.3:78604154-78604173 | MS.gene31054:intron | 20.0% |
!! | TTATCTTGAACATCTTAATT+AGG | - | chr3.3:78601723-78601742 | None:intergenic | 20.0% |
!!! | AAAATGTTTAAGGGTATAAT+TGG | - | chr3.3:78601245-78601264 | None:intergenic | 20.0% |
!!! | AAACAATGTTATCCTTTTTA+TGG | + | chr3.3:78603981-78604000 | MS.gene31054:intron | 20.0% |
!!! | AAATGTTTAAGGGTATAATT+GGG | - | chr3.3:78601244-78601263 | None:intergenic | 20.0% |
!!! | AACAATGTTATCCTTTTTAT+GGG | + | chr3.3:78603982-78604001 | MS.gene31054:intron | 20.0% |
!!! | ACCAACAACAATTTTTATTA+TGG | - | chr3.3:78601271-78601290 | None:intergenic | 20.0% |
!!! | CATATTTAAGTACTTTTCAT+TGG | - | chr3.3:78602875-78602894 | None:intergenic | 20.0% |
!!! | TATTACTCATTTTTACAAGT+GGG | + | chr3.3:78602933-78602952 | MS.gene31054:intron | 20.0% |
!!! | TATTGTTTGAAGTTAAGTTA+AGG | - | chr3.3:78603848-78603867 | None:intergenic | 20.0% |
!!! | TTACTACTGTTGATTTAAAA+CGG | + | chr3.3:78602626-78602645 | MS.gene31054:intron | 20.0% |
!!! | TTTTTATCTTCATTAAACTC+CGG | - | chr3.3:78600508-78600527 | None:intergenic | 20.0% |
! | AAAAATTAATCTCTCAAACC+GGG | - | chr3.3:78600826-78600845 | None:intergenic | 25.0% |
! | AAGAATTTCATCTCGTATTT+AGG | - | chr3.3:78602695-78602714 | None:intergenic | 25.0% |
! | AGTAATAGTAAGAGTTATCA+GGG | + | chr3.3:78600912-78600931 | MS.gene31054:intron | 25.0% |
! | ATGTGATAACATCTTTGATA+TGG | - | chr3.3:78600359-78600378 | None:intergenic | 25.0% |
! | GTAATAAAATGTGTACTACT+TGG | - | chr3.3:78602960-78602979 | None:intergenic | 25.0% |
! | GTTGCATGAAATTAAGTTAA+TGG | + | chr3.3:78604244-78604263 | MS.gene31054:intron | 25.0% |
! | GTTTCATATGTAAAGATAGT+GGG | - | chr3.3:78602899-78602918 | None:intergenic | 25.0% |
! | TAGATTAACAATGTTCAGTT+TGG | + | chr3.3:78599743-78599762 | MS.gene31054:CDS | 25.0% |
! | TAGTAATAGTAAGAGTTATC+AGG | + | chr3.3:78600911-78600930 | MS.gene31054:intron | 25.0% |
! | TATTACTTCTTTATGCAAGT+GGG | + | chr3.3:78602974-78602993 | MS.gene31054:intron | 25.0% |
! | TCAAACCCTATTAAAACATT+TGG | + | chr3.3:78601758-78601777 | MS.gene31054:intron | 25.0% |
! | TGTGATAACATCTTTGATAT+GGG | - | chr3.3:78600358-78600377 | None:intergenic | 25.0% |
! | TGTTTCATATGTAAAGATAG+TGG | - | chr3.3:78602900-78602919 | None:intergenic | 25.0% |
! | TTATTACTTCTTTATGCAAG+TGG | + | chr3.3:78602973-78602992 | MS.gene31054:intron | 25.0% |
!! | AGAAATGCTACTTAATGAAA+TGG | + | chr3.3:78602082-78602101 | MS.gene31054:intron | 25.0% |
!! | GTTAATCTAGAACAACTTAA+AGG | - | chr3.3:78599732-78599751 | None:intergenic | 25.0% |
!! | TTCTATTTCTCCTCATAATA+GGG | + | chr3.3:78599766-78599785 | MS.gene31054:CDS | 25.0% |
!! | TTTTACTATACATGATAGCT+TGG | + | chr3.3:78603567-78603586 | MS.gene31054:intron | 25.0% |
!!! | CATAAAAAGAAAGTGTTAGT+AGG | + | chr3.3:78601616-78601635 | MS.gene31054:intron | 25.0% |
!!! | CTATTACTCATTTTTACAAG+TGG | + | chr3.3:78602932-78602951 | MS.gene31054:intron | 25.0% |
!!! | TATATTTTTTCGGTGTTGTT+CGG | + | chr3.3:78600019-78600038 | MS.gene31054:intron | 25.0% |
AAAAAACTTAATACCCATGG+TGG | - | chr3.3:78600975-78600994 | None:intergenic | 30.0% | |
AAAAACTTAATACCCATGGT+GGG | - | chr3.3:78600974-78600993 | None:intergenic | 30.0% | |
AAAACGTTTAAGTGAACTCT+GGG | + | chr3.3:78600270-78600289 | MS.gene31054:intron | 30.0% | |
AATTTCATCTCGTATTTAGG+TGG | - | chr3.3:78602692-78602711 | None:intergenic | 30.0% | |
AATTTGATGTGTCATCTAGT+AGG | - | chr3.3:78603288-78603307 | None:intergenic | 30.0% | |
ACCAACATTCTTAAACATTG+AGG | - | chr3.3:78603700-78603719 | None:intergenic | 30.0% | |
ACCTCAATGTTTAAGAATGT+TGG | + | chr3.3:78603696-78603715 | MS.gene31054:CDS | 30.0% | |
ACTTAACATTGTTGCATTCA+TGG | - | chr3.3:78600767-78600786 | None:intergenic | 30.0% | |
AGTAGTAACACATACAAAGT+AGG | - | chr3.3:78602614-78602633 | None:intergenic | 30.0% | |
AGTTCAAAGAAGGTTTACAA+AGG | + | chr3.3:78600319-78600338 | MS.gene31054:intron | 30.0% | |
ATAGTATAGATGACGATTTG+TGG | - | chr3.3:78601001-78601020 | None:intergenic | 30.0% | |
CTTCTCAATTGAGAAATTAC+AGG | - | chr3.3:78604288-78604307 | None:intergenic | 30.0% | |
GGTGTCTTAATTAATTGACT+AGG | + | chr3.3:78604335-78604354 | MS.gene31054:intron | 30.0% | |
GTAATAAAACGTGTACTACT+TGG | - | chr3.3:78603042-78603061 | None:intergenic | 30.0% | |
GTAGTAACACATACAAAGTA+GGG | - | chr3.3:78602613-78602632 | None:intergenic | 30.0% | |
TAGTATAGATGACGATTTGT+GGG | - | chr3.3:78601000-78601019 | None:intergenic | 30.0% | |
TCAAATCTTCTTGAAGACAA+TGG | - | chr3.3:78602662-78602681 | None:intergenic | 30.0% | |
TCGGAAAAAGAAAACGATAA+AGG | - | chr3.3:78603936-78603955 | None:intergenic | 30.0% | |
! | CAAGTTTTACATTCCAGTTT+GGG | - | chr3.3:78603596-78603615 | None:intergenic | 30.0% |
! | GAGAGATTAATTTTTACCGT+CGG | + | chr3.3:78600831-78600850 | MS.gene31054:intron | 30.0% |
! | GATGACACATCAAATTTTAC+CGG | + | chr3.3:78603292-78603311 | MS.gene31054:CDS | 30.0% |
! | GTTCTATTTCTCCTCATAAT+AGG | + | chr3.3:78599765-78599784 | MS.gene31054:CDS | 30.0% |
!! | AGCAAAAGAAGTATCTATGT+TGG | - | chr3.3:78604420-78604439 | None:intergenic | 30.0% |
!! | TGTGTTAGCTAGATTTTGAT+TGG | - | chr3.3:78603501-78603520 | None:intergenic | 30.0% |
!!! | ATATTTTTTCGGTGTTGTTC+GGG | + | chr3.3:78600020-78600039 | MS.gene31054:intron | 30.0% |
!!! | CGGATCCAAATGTTTTAATA+GGG | - | chr3.3:78601766-78601785 | None:intergenic | 30.0% |
!!! | TCGGATCCAAATGTTTTAAT+AGG | - | chr3.3:78601767-78601786 | None:intergenic | 30.0% |
AAATAAGTGATGTGTCACGT+GGG | - | chr3.3:78602785-78602804 | None:intergenic | 35.0% | |
AAGAAGTTGACTAATGCACA+AGG | - | chr3.3:78600409-78600428 | None:intergenic | 35.0% | |
ACAATGGTAGTTTCCTAACA+AGG | + | chr3.3:78602744-78602763 | MS.gene31054:intron | 35.0% | |
ACAGGCAAAATTACACAACT+CGG | - | chr3.3:78604270-78604289 | None:intergenic | 35.0% | |
ACATTGAGGTGAGTACATTA+AGG | - | chr3.3:78603686-78603705 | None:intergenic | 35.0% | |
AGGAACCTTGTTCAAAACAA+GGG | + | chr3.3:78604542-78604561 | MS.gene31054:CDS | 35.0% | |
AGTACATTAAGGTTGGAAGT+TGG | - | chr3.3:78603675-78603694 | None:intergenic | 35.0% | |
AGTATAGATGACGATTTGTG+GGG | - | chr3.3:78600999-78601018 | None:intergenic | 35.0% | |
ATCCAATAACCCATCACTTA+TGG | - | chr3.3:78600732-78600751 | None:intergenic | 35.0% | |
CAAGCTTAACCATAAGTGAT+GGG | + | chr3.3:78600720-78600739 | MS.gene31054:intron | 35.0% | |
CCAAACTGGAATGTAAAACT+TGG | + | chr3.3:78603594-78603613 | MS.gene31054:CDS | 35.0% | |
CCAATGGCAATACACTAATA+AGG | + | chr3.3:78602846-78602865 | MS.gene31054:intron | 35.0% | |
CCTTATTAGTGTATTGCCAT+TGG | - | chr3.3:78602849-78602868 | None:intergenic | 35.0% | |
GAAAACGTTTAAGTGAACTC+TGG | + | chr3.3:78600269-78600288 | MS.gene31054:intron | 35.0% | |
GAAATTAGTGACACATGTGA+AGG | - | chr3.3:78599950-78599969 | None:intergenic | 35.0% | |
GAGAACTTTGCCAAACATTA+TGG | + | chr3.3:78600795-78600814 | MS.gene31054:intron | 35.0% | |
GATAACATCTTTGATATGGG+TGG | - | chr3.3:78600355-78600374 | None:intergenic | 35.0% | |
GGGAAAAAACTTAATACCCA+TGG | - | chr3.3:78600978-78600997 | None:intergenic | 35.0% | |
TAAATAAGTGATGTGTCACG+TGG | - | chr3.3:78602786-78602805 | None:intergenic | 35.0% | |
TACAATTGCAACAGAGTATG+TGG | - | chr3.3:78603443-78603462 | None:intergenic | 35.0% | |
TACTATACATGATAGCTTGG+TGG | + | chr3.3:78603570-78603589 | MS.gene31054:intron | 35.0% | |
TAGCAGTTGTCAAAAGAAGT+GGG | - | chr3.3:78604518-78604537 | None:intergenic | 35.0% | |
TCAAGCTTAACCATAAGTGA+TGG | + | chr3.3:78600719-78600738 | MS.gene31054:intron | 35.0% | |
TGTTATCACATTGACGATAG+CGG | + | chr3.3:78600368-78600387 | MS.gene31054:intron | 35.0% | |
TTACATTGACAAAGCAATCG+TGG | - | chr3.3:78599926-78599945 | None:intergenic | 35.0% | |
TTGTTAGGAAACTACCATTG+TGG | - | chr3.3:78602745-78602764 | None:intergenic | 35.0% | |
! | AATTTTTCTTCCTCCAATGG+AGG | + | chr3.3:78603140-78603159 | MS.gene31054:intron | 35.0% |
! | ATTTTTACCGTCGGATGTAA+AGG | + | chr3.3:78600840-78600859 | MS.gene31054:intron | 35.0% |
! | ATTTTTCTTCCTCCAATGGA+GGG | + | chr3.3:78603141-78603160 | MS.gene31054:intron | 35.0% |
! | CCAAGTTTTACATTCCAGTT+TGG | - | chr3.3:78603597-78603616 | None:intergenic | 35.0% |
! | CTCAATTTTTCTTCCTCCAA+TGG | + | chr3.3:78603137-78603156 | MS.gene31054:intron | 35.0% |
! | TCAGACCAACAACTTTTCAA+CGG | + | chr3.3:78604575-78604594 | MS.gene31054:CDS | 35.0% |
! | TTTTAGCGCAGTAAAAAGAG+CGG | + | chr3.3:78601415-78601434 | MS.gene31054:intron | 35.0% |
!! | AACCATAAGTGATGGGTTAT+TGG | + | chr3.3:78600727-78600746 | MS.gene31054:intron | 35.0% |
!! | TAAAGGAAGAAAGCGTTATC+TGG | + | chr3.3:78604171-78604190 | MS.gene31054:intron | 35.0% |
AAGCAAGGTGCACAACATTT+AGG | + | chr3.3:78604375-78604394 | MS.gene31054:CDS | 40.0% | |
AAGGAACGGGCAACTATATA+AGG | - | chr3.3:78603109-78603128 | None:intergenic | 40.0% | |
AATAAGTGATGTGTCACGTG+GGG | - | chr3.3:78602784-78602803 | None:intergenic | 40.0% | |
AGCAAGGTGCACAACATTTA+GGG | + | chr3.3:78604376-78604395 | MS.gene31054:CDS | 40.0% | |
AGCAGTTGTCAAAAGAAGTG+GGG | - | chr3.3:78604517-78604536 | None:intergenic | 40.0% | |
AGGATCAGGGGACAATAATT+TGG | + | chr3.3:78604472-78604491 | MS.gene31054:CDS | 40.0% | |
AGTAAAAAGAGCGGAAAGAC+GGG | + | chr3.3:78601424-78601443 | MS.gene31054:intron | 40.0% | |
ATAGCCACTCACTATTGAGT+TGG | - | chr3.3:78604609-78604628 | None:intergenic | 40.0% | |
ATTAATCTCTCAAACCGGGT+AGG | - | chr3.3:78600822-78600841 | None:intergenic | 40.0% | |
ATTCGCTAGTAGGGATAAAG+TGG | + | chr3.3:78601448-78601467 | MS.gene31054:intron | 40.0% | |
CAGGAACCTTGTTCAAAACA+AGG | + | chr3.3:78604541-78604560 | MS.gene31054:CDS | 40.0% | |
CAGTAAAAAGAGCGGAAAGA+CGG | + | chr3.3:78601423-78601442 | MS.gene31054:intron | 40.0% | |
CATTGTTGCATTCATGGAGT+TGG | - | chr3.3:78600761-78600780 | None:intergenic | 40.0% | |
CCATTTAAGGAGTCCTTGTT+AGG | - | chr3.3:78602760-78602779 | None:intergenic | 40.0% | |
CCTAACAAGGACTCCTTAAA+TGG | + | chr3.3:78602757-78602776 | MS.gene31054:intron | 40.0% | |
GAAAAATTGAGTCCCCGTTA+AGG | - | chr3.3:78603128-78603147 | None:intergenic | 40.0% | |
GGAGTCATTGAGTCCTTAAT+AGG | - | chr3.3:78602828-78602847 | None:intergenic | 40.0% | |
GTAGCAGTTGTCAAAAGAAG+TGG | - | chr3.3:78604519-78604538 | None:intergenic | 40.0% | |
GTATAGATGACGATTTGTGG+GGG | - | chr3.3:78600998-78601017 | None:intergenic | 40.0% | |
GTTTGTAGAGAGTTGTGCAT+TGG | - | chr3.3:78599796-78599815 | None:intergenic | 40.0% | |
TAAGGACTCAATGACTCCAA+TGG | + | chr3.3:78602830-78602849 | MS.gene31054:intron | 40.0% | |
TATAGTTGCCCGTTCCTTAA+CGG | + | chr3.3:78603111-78603130 | MS.gene31054:intron | 40.0% | |
TCCTGGACATATGTTCTCTA+CGG | - | chr3.3:78603386-78603405 | None:intergenic | 40.0% | |
TCTAATTGCCCAAAGACATC+AGG | + | chr3.3:78604452-78604471 | MS.gene31054:CDS | 40.0% | |
TGAGGTGAGTACATTAAGGT+TGG | - | chr3.3:78603682-78603701 | None:intergenic | 40.0% | |
TGGACAATGGAAGAGAGTTT+GGG | - | chr3.3:78599837-78599856 | None:intergenic | 40.0% | |
TTGGACAATGGAAGAGAGTT+TGG | - | chr3.3:78599838-78599857 | None:intergenic | 40.0% | |
! | CTTCTTAGAGCATCTCCAAT+GGG | - | chr3.3:78603204-78603223 | None:intergenic | 40.0% |
! | CTTTTGACAACTGCTACTAC+AGG | + | chr3.3:78604522-78604541 | MS.gene31054:CDS | 40.0% |
! | GCAAGCTTCAAGTTCAAAGA+AGG | + | chr3.3:78600309-78600328 | MS.gene31054:intron | 40.0% |
! | TTCTTAGAGCATCTCCAATG+GGG | - | chr3.3:78603203-78603222 | None:intergenic | 40.0% |
!! | ACTCAAAAGCACTTGGATGA+TGG | + | chr3.3:78600684-78600703 | MS.gene31054:intron | 40.0% |
!! | ACTTGTCACTCAAAAGCACT+TGG | + | chr3.3:78600677-78600696 | MS.gene31054:intron | 40.0% |
!! | AGAGAGTTTGGGACAAGTTT+TGG | - | chr3.3:78599826-78599845 | None:intergenic | 40.0% |
!!! | GAAGACCCTTGTTTTGAACA+AGG | - | chr3.3:78604550-78604569 | None:intergenic | 40.0% |
AACAGAGTATGTGGCAGCAA+TGG | - | chr3.3:78603434-78603453 | None:intergenic | 45.0% | |
AAGCCACTCACTGGATCAAA+TGG | + | chr3.3:78604692-78604711 | MS.gene31054:CDS | 45.0% | |
AAGGACTTAGTCGCATTGTC+AGG | + | chr3.3:78603729-78603748 | MS.gene31054:CDS | 45.0% | |
AGCAATCGTGGAAGAACAAG+CGG | - | chr3.3:78599914-78599933 | None:intergenic | 45.0% | |
AGTGCAATCCGCTATATCGA+AGG | + | chr3.3:78599863-78599882 | MS.gene31054:CDS | 45.0% | |
ATAAGGACTCTCTCTCTCCT+GGG | - | chr3.3:78603092-78603111 | None:intergenic | 45.0% | |
ATAGTTGCCCGTTCCTTAAC+GGG | + | chr3.3:78603112-78603131 | MS.gene31054:intron | 45.0% | |
ATTGAGTCCCCGTTAAGGAA+CGG | - | chr3.3:78603123-78603142 | None:intergenic | 45.0% | |
CATTGGCACTCCCTATTATG+AGG | - | chr3.3:78599779-78599798 | None:intergenic | 45.0% | |
CCAAACATTATGGTCCTACC+CGG | + | chr3.3:78600805-78600824 | MS.gene31054:intron | 45.0% | |
CCTCGAACAGAGTTCCTATT+CGG | - | chr3.3:78603334-78603353 | None:intergenic | 45.0% | |
CGAATGTCCTTTACATCCGA+CGG | - | chr3.3:78600850-78600869 | None:intergenic | 45.0% | |
CTACCATTGTGGATGCTCTT+AGG | - | chr3.3:78602734-78602753 | None:intergenic | 45.0% | |
CTCACACAATTGGACAAGCA+AGG | + | chr3.3:78604360-78604379 | MS.gene31054:CDS | 45.0% | |
CTCGAACAGAGTTCCTATTC+GGG | - | chr3.3:78603333-78603352 | None:intergenic | 45.0% | |
GCAAGGATAAAACCCACCAT+GGG | + | chr3.3:78600959-78600978 | MS.gene31054:intron | 45.0% | |
GCAGTTGTCAAAAGAAGTGG+GGG | - | chr3.3:78604516-78604535 | None:intergenic | 45.0% | |
GCCACTGCTATGATCAAGAT+GGG | + | chr3.3:78604662-78604681 | MS.gene31054:CDS | 45.0% | |
GGAGATATTAAGCCACTCAC+TGG | + | chr3.3:78604683-78604702 | MS.gene31054:CDS | 45.0% | |
GGAGTGGTCCTTGTTAAGTA+AGG | + | chr3.3:78603174-78603193 | MS.gene31054:intron | 45.0% | |
TATAAGGACTCTCTCTCTCC+TGG | - | chr3.3:78603093-78603112 | None:intergenic | 45.0% | |
TCAGCACATGATACAACTCC+TGG | - | chr3.3:78603403-78603422 | None:intergenic | 45.0% | |
TCCACCAACTCAATAGTGAG+TGG | + | chr3.3:78604602-78604621 | MS.gene31054:CDS | 45.0% | |
TCCCATCTTGATCATAGCAG+TGG | - | chr3.3:78604666-78604685 | None:intergenic | 45.0% | |
TCTCCATTTGATCCAGTGAG+TGG | - | chr3.3:78604698-78604717 | None:intergenic | 45.0% | |
TCTCTCTCCTGGGTAACTAA+CGG | - | chr3.3:78603082-78603101 | None:intergenic | 45.0% | |
TGACAATGCGACTAAGTCCT+TGG | - | chr3.3:78603730-78603749 | None:intergenic | 45.0% | |
TGACTAGGTGCTCACACAAT+TGG | + | chr3.3:78604350-78604369 | MS.gene31054:intron | 45.0% | |
TGCAAGGATAAAACCCACCA+TGG | + | chr3.3:78600958-78600977 | MS.gene31054:intron | 45.0% | |
TGCCACTGCTATGATCAAGA+TGG | + | chr3.3:78604661-78604680 | MS.gene31054:CDS | 45.0% | |
TGTCAAAAGAAGTGGGGGTA+TGG | - | chr3.3:78604511-78604530 | None:intergenic | 45.0% | |
! | ACCAACAACTTTTCAACGGC+GGG | + | chr3.3:78604579-78604598 | MS.gene31054:CDS | 45.0% |
! | ACTACCCCTTTCAGCACTTT+TGG | + | chr3.3:78601032-78601051 | MS.gene31054:intron | 45.0% |
! | ATATCGAAGGAGGCACGAAT+GGG | + | chr3.3:78599876-78599895 | MS.gene31054:CDS | 45.0% |
! | CTACCCCTTTCAGCACTTTT+GGG | + | chr3.3:78601033-78601052 | MS.gene31054:intron | 45.0% |
! | GACCAACAACTTTTCAACGG+CGG | + | chr3.3:78604578-78604597 | MS.gene31054:CDS | 45.0% |
! | GCTTCTTAGAGCATCTCCAA+TGG | - | chr3.3:78603205-78603224 | None:intergenic | 45.0% |
! | TATATCGAAGGAGGCACGAA+TGG | + | chr3.3:78599875-78599894 | MS.gene31054:CDS | 45.0% |
! | TCTTAGAGCATCTCCAATGG+GGG | - | chr3.3:78603202-78603221 | None:intergenic | 45.0% |
! | TGCAATTATAGGGGTGCGAT+GGG | + | chr3.3:78603257-78603276 | MS.gene31054:intron | 45.0% |
! | TTGCAATTATAGGGGTGCGA+TGG | + | chr3.3:78603256-78603275 | MS.gene31054:intron | 45.0% |
!! | ATGCCTAAGAGCATCCACAA+TGG | + | chr3.3:78602728-78602747 | MS.gene31054:intron | 45.0% |
!! | CAACCCAAAAGTGCTGAAAG+GGG | - | chr3.3:78601039-78601058 | None:intergenic | 45.0% |
!! | CCAACCCAAAAGTGCTGAAA+GGG | - | chr3.3:78601040-78601059 | None:intergenic | 45.0% |
!! | TAAGGTTGGAAGTTGGTGCT+GGG | - | chr3.3:78603668-78603687 | None:intergenic | 45.0% |
!! | TCCAACCCAAAAGTGCTGAA+AGG | - | chr3.3:78601041-78601060 | None:intergenic | 45.0% |
!! | TCGATATAGCGGATTGCACT+TGG | - | chr3.3:78599863-78599882 | None:intergenic | 45.0% |
!! | TTAAGGTTGGAAGTTGGTGC+TGG | - | chr3.3:78603669-78603688 | None:intergenic | 45.0% |
!! | AAAATTAAACATAAATAAAA+TGG | + | chr3.3:78602276-78602295 | MS.gene31054:intron | 5.0% |
!! | AAATTAAACATAAATAAAAT+GGG | + | chr3.3:78602277-78602296 | MS.gene31054:intron | 5.0% |
!! | TTATTTGTATTAAAAATTAA+GGG | - | chr3.3:78601082-78601101 | None:intergenic | 5.0% |
!!! | AAAAGTATAAATTAAAAATA+TGG | + | chr3.3:78601995-78602014 | MS.gene31054:intron | 5.0% |
AAAGACGGGCATTCGCTAGT+AGG | + | chr3.3:78601438-78601457 | MS.gene31054:intron | 50.0% | |
AAGACGGGCATTCGCTAGTA+GGG | + | chr3.3:78601439-78601458 | MS.gene31054:intron | 50.0% | |
AATCGTGGAAGAACAAGCGG+AGG | - | chr3.3:78599911-78599930 | None:intergenic | 50.0% | |
ACCCGCCGTTGAAAAGTTGT+TGG | - | chr3.3:78604583-78604602 | None:intergenic | 50.0% | |
ACTTGAAGCTTGCCCTGATC+TGG | - | chr3.3:78600302-78600321 | None:intergenic | 50.0% | |
AGAAGAACGCACTCCCGAAT+AGG | + | chr3.3:78603317-78603336 | MS.gene31054:CDS | 50.0% | |
AGCAGATTGACTAGCAGTCG+TGG | - | chr3.3:78603631-78603650 | None:intergenic | 50.0% | |
AGTATGTGGCAGCAATGGCT+AGG | - | chr3.3:78603429-78603448 | None:intergenic | 50.0% | |
CAATGCGACTAAGTCCTTGG+TGG | - | chr3.3:78603727-78603746 | None:intergenic | 50.0% | |
CCCAAAGACATCAGGATCAG+GGG | + | chr3.3:78604460-78604479 | MS.gene31054:CDS | 50.0% | |
CCCCTGATCCTGATGTCTTT+GGG | - | chr3.3:78604463-78604482 | None:intergenic | 50.0% | |
CCGAATAGGAACTCTGTTCG+AGG | + | chr3.3:78603331-78603350 | MS.gene31054:CDS | 50.0% | |
CCGGGTAGGACCATAATGTT+TGG | - | chr3.3:78600808-78600827 | None:intergenic | 50.0% | |
CTCCAATGGAGGGTCCTTAA+CGG | + | chr3.3:78603151-78603170 | MS.gene31054:intron | 50.0% | |
CTCTCTCCTGGGTAACTAAC+GGG | - | chr3.3:78603081-78603100 | None:intergenic | 50.0% | |
GCAATCCGCTATATCGAAGG+AGG | + | chr3.3:78599866-78599885 | MS.gene31054:CDS | 50.0% | |
GCCCAAAGACATCAGGATCA+GGG | + | chr3.3:78604459-78604478 | MS.gene31054:CDS | 50.0% | |
GCCGTAGAGAACATATGTCC+AGG | + | chr3.3:78603382-78603401 | MS.gene31054:CDS | 50.0% | |
GTTAAGTAAGGACCCCCCAT+TGG | + | chr3.3:78603186-78603205 | MS.gene31054:intron | 50.0% | |
TAGTTGCCCGTTCCTTAACG+GGG | + | chr3.3:78603113-78603132 | MS.gene31054:intron | 50.0% | |
TCCAATGGAGGGTCCTTAAC+GGG | + | chr3.3:78603152-78603171 | MS.gene31054:intron | 50.0% | |
TCCCCTGATCCTGATGTCTT+TGG | - | chr3.3:78604464-78604483 | None:intergenic | 50.0% | |
TCGTGCCTCCTTCGATATAG+CGG | - | chr3.3:78599874-78599893 | None:intergenic | 50.0% | |
TGCCCAAAGACATCAGGATC+AGG | + | chr3.3:78604458-78604477 | MS.gene31054:CDS | 50.0% | |
TGGGGGGTCCTTACTTAACA+AGG | - | chr3.3:78603185-78603204 | None:intergenic | 50.0% | |
TGTCACGTGGGGTCCATTTA+AGG | - | chr3.3:78602773-78602792 | None:intergenic | 50.0% | |
TTGAGTCCCCGTTAAGGAAC+GGG | - | chr3.3:78603122-78603141 | None:intergenic | 50.0% | |
! | CTTAGAGCATCTCCAATGGG+GGG | - | chr3.3:78603201-78603220 | None:intergenic | 50.0% |
! | TTGCACTTGGCGTTGGACAA+TGG | - | chr3.3:78599850-78599869 | None:intergenic | 50.0% |
!! | CCCTTTCAGCACTTTTGGGT+TGG | + | chr3.3:78601037-78601056 | MS.gene31054:intron | 50.0% |
!! | GCCACTCACTATTGAGTTGG+TGG | - | chr3.3:78604606-78604625 | None:intergenic | 50.0% |
ACAAGGACCACTCCCCGTTA+AGG | - | chr3.3:78603168-78603187 | None:intergenic | 55.0% | |
CCAATGGAGGGTCCTTAACG+GGG | + | chr3.3:78603153-78603172 | MS.gene31054:intron | 55.0% | |
CGTTAAGGACCCTCCATTGG+AGG | - | chr3.3:78603153-78603172 | None:intergenic | 55.0% | |
TCTGGGTGCTCACCAGATCA+GGG | + | chr3.3:78600287-78600306 | MS.gene31054:intron | 55.0% | |
! | GATAGCTTGGTGGCCCAAAC+TGG | + | chr3.3:78603580-78603599 | MS.gene31054:intron | 55.0% |
! | GTGGGGGTATGGAGATCAAG+AGG | - | chr3.3:78604500-78604519 | None:intergenic | 55.0% |
!! | GTTGGAAGTTGGTGCTGGGA+TGG | - | chr3.3:78603664-78603683 | None:intergenic | 55.0% |
!! | TAGCGGATTGCACTTGGCGT+TGG | - | chr3.3:78599857-78599876 | None:intergenic | 55.0% |
CCCCGTTAAGGACCCTCCAT+TGG | - | chr3.3:78603156-78603175 | None:intergenic | 60.0% | |
CTCTGGGTGCTCACCAGATC+AGG | + | chr3.3:78600286-78600305 | MS.gene31054:intron | 60.0% | |
GTGGGACCCGTTAGTTACCC+AGG | + | chr3.3:78603072-78603091 | MS.gene31054:intron | 60.0% | |
! | CGGGAGTGCGTTCTTCTCTC+CGG | - | chr3.3:78603314-78603333 | None:intergenic | 60.0% |
GGAGGGTCCTTAACGGGGAG+TGG | + | chr3.3:78603158-78603177 | MS.gene31054:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 78599723 | 78604748 | 78599723 | ID=MS.gene31054 |
chr3.3 | mRNA | 78599723 | 78604748 | 78599723 | ID=MS.gene31054.t1;Parent=MS.gene31054 |
chr3.3 | exon | 78599723 | 78599941 | 78599723 | ID=MS.gene31054.t1.exon1;Parent=MS.gene31054.t1 |
chr3.3 | CDS | 78599723 | 78599941 | 78599723 | ID=cds.MS.gene31054.t1;Parent=MS.gene31054.t1 |
chr3.3 | exon | 78603268 | 78603459 | 78603268 | ID=MS.gene31054.t1.exon2;Parent=MS.gene31054.t1 |
chr3.3 | CDS | 78603268 | 78603459 | 78603268 | ID=cds.MS.gene31054.t1;Parent=MS.gene31054.t1 |
chr3.3 | exon | 78603585 | 78603750 | 78603585 | ID=MS.gene31054.t1.exon3;Parent=MS.gene31054.t1 |
chr3.3 | CDS | 78603585 | 78603750 | 78603585 | ID=cds.MS.gene31054.t1;Parent=MS.gene31054.t1 |
chr3.3 | exon | 78604357 | 78604748 | 78604357 | ID=MS.gene31054.t1.exon4;Parent=MS.gene31054.t1 |
chr3.3 | CDS | 78604357 | 78604748 | 78604357 | ID=cds.MS.gene31054.t1;Parent=MS.gene31054.t1 |
Gene Sequence |
Protein sequence |