Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31055.t1 | XP_003602461.1 | 98.1 | 322 | 6 | 0 | 1 | 322 | 1 | 322 | 1.10E-169 | 605.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31055.t1 | Q9FLC0 | 73.9 | 318 | 79 | 1 | 9 | 322 | 7 | 324 | 3.9e-128 | 459.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31055.t1 | G7J9S0 | 98.1 | 322 | 6 | 0 | 1 | 322 | 1 | 322 | 7.8e-170 | 605.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26287 | MS.gene31055 | PPI |
| MS.gene38511 | MS.gene31055 | PPI |
| MS.gene31055 | MS.gene98878 | PPI |
| MS.gene31055 | MS.gene41565 | PPI |
| MS.gene017207 | MS.gene31055 | PPI |
| MS.gene31055 | MS.gene017208 | PPI |
| MS.gene31055 | MS.gene008562 | PPI |
| MS.gene009689 | MS.gene31055 | PPI |
| MS.gene26286 | MS.gene31055 | PPI |
| MS.gene31055 | MS.gene009691 | PPI |
| MS.gene049488 | MS.gene31055 | PPI |
| MS.gene49484 | MS.gene31055 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31055.t1 | MTR_3g094630 | 98.137 | 322 | 6 | 0 | 1 | 322 | 1 | 322 | 0.0 | 643 |
| MS.gene31055.t1 | MTR_3g094670 | 92.547 | 322 | 24 | 0 | 1 | 322 | 1 | 322 | 0.0 | 587 |
| MS.gene31055.t1 | MTR_3g094650 | 85.404 | 322 | 47 | 0 | 1 | 322 | 1 | 322 | 0.0 | 565 |
| MS.gene31055.t1 | MTR_5g083860 | 77.316 | 313 | 70 | 1 | 11 | 322 | 13 | 325 | 2.27e-179 | 499 |
| MS.gene31055.t1 | MTR_3g466200 | 67.834 | 314 | 100 | 1 | 10 | 322 | 7 | 320 | 3.95e-160 | 450 |
| MS.gene31055.t1 | MTR_2g084080 | 66.238 | 311 | 101 | 2 | 14 | 322 | 9 | 317 | 3.00e-149 | 422 |
| MS.gene31055.t1 | MTR_2g084110 | 64.423 | 312 | 109 | 1 | 11 | 322 | 8 | 317 | 9.67e-147 | 416 |
| MS.gene31055.t1 | MTR_2g084020 | 64.087 | 323 | 110 | 3 | 1 | 322 | 1 | 318 | 1.78e-145 | 412 |
| MS.gene31055.t1 | MTR_2g084090 | 64.103 | 312 | 111 | 1 | 11 | 322 | 8 | 318 | 1.84e-145 | 412 |
| MS.gene31055.t1 | MTR_2g084010 | 64.217 | 313 | 109 | 2 | 11 | 322 | 8 | 318 | 4.58e-144 | 409 |
| MS.gene31055.t1 | MTR_5g074970 | 63.666 | 311 | 110 | 3 | 14 | 322 | 17 | 326 | 1.12e-142 | 405 |
| MS.gene31055.t1 | MTR_2g084000 | 62.136 | 309 | 114 | 2 | 15 | 322 | 13 | 319 | 1.74e-139 | 397 |
| MS.gene31055.t1 | MTR_7g072510 | 58.599 | 314 | 128 | 1 | 9 | 322 | 1 | 312 | 7.49e-134 | 383 |
| MS.gene31055.t1 | MTR_4g083710 | 60.443 | 316 | 121 | 4 | 11 | 322 | 9 | 324 | 9.96e-134 | 383 |
| MS.gene31055.t1 | MTR_3g072190 | 58.750 | 320 | 124 | 2 | 9 | 322 | 1 | 318 | 7.55e-132 | 378 |
| MS.gene31055.t1 | MTR_3g466180 | 62.136 | 309 | 113 | 2 | 14 | 322 | 19 | 323 | 1.33e-130 | 375 |
| MS.gene31055.t1 | MTR_5g074860 | 58.176 | 318 | 122 | 6 | 9 | 321 | 13 | 324 | 4.34e-126 | 363 |
| MS.gene31055.t1 | MTR_7g072480 | 55.414 | 314 | 138 | 1 | 9 | 322 | 5 | 316 | 6.15e-126 | 363 |
| MS.gene31055.t1 | MTR_4g074995 | 58.491 | 318 | 116 | 4 | 8 | 322 | 4 | 308 | 7.49e-125 | 360 |
| MS.gene31055.t1 | MTR_4g029170 | 57.372 | 312 | 128 | 4 | 13 | 322 | 13 | 321 | 3.09e-124 | 359 |
| MS.gene31055.t1 | MTR_1g115900 | 56.731 | 312 | 129 | 4 | 14 | 322 | 13 | 321 | 3.20e-123 | 357 |
| MS.gene31055.t1 | MTR_4g074990 | 55.873 | 315 | 121 | 4 | 11 | 322 | 6 | 305 | 6.15e-123 | 355 |
| MS.gene31055.t1 | MTR_5g074710 | 55.280 | 322 | 135 | 6 | 7 | 322 | 3 | 321 | 1.03e-120 | 350 |
| MS.gene31055.t1 | MTR_4g029200 | 52.922 | 308 | 143 | 1 | 15 | 322 | 33 | 338 | 1.50e-120 | 350 |
| MS.gene31055.t1 | MTR_4g029180 | 58.362 | 293 | 118 | 3 | 32 | 322 | 31 | 321 | 2.91e-120 | 348 |
| MS.gene31055.t1 | MTR_5g074760 | 54.969 | 322 | 136 | 6 | 7 | 322 | 3 | 321 | 4.00e-119 | 346 |
| MS.gene31055.t1 | MTR_5g074740 | 54.658 | 322 | 137 | 6 | 7 | 322 | 3 | 321 | 3.55e-118 | 343 |
| MS.gene31055.t1 | MTR_7g026990 | 52.500 | 320 | 145 | 4 | 4 | 322 | 9 | 322 | 1.02e-116 | 340 |
| MS.gene31055.t1 | MTR_4g029190 | 52.632 | 304 | 143 | 1 | 20 | 322 | 37 | 340 | 4.88e-116 | 338 |
| MS.gene31055.t1 | MTR_7g093370 | 52.000 | 325 | 144 | 5 | 8 | 322 | 49 | 371 | 5.49e-115 | 337 |
| MS.gene31055.t1 | MTR_3g467600 | 50.313 | 320 | 152 | 4 | 8 | 322 | 7 | 324 | 9.11e-111 | 325 |
| MS.gene31055.t1 | MTR_3g072190 | 62.302 | 252 | 93 | 1 | 71 | 322 | 2 | 251 | 4.07e-110 | 320 |
| MS.gene31055.t1 | MTR_5g021060 | 51.815 | 303 | 136 | 3 | 28 | 322 | 30 | 330 | 4.21e-110 | 323 |
| MS.gene31055.t1 | MTR_1g054205 | 50.625 | 320 | 144 | 5 | 14 | 322 | 10 | 326 | 6.62e-109 | 320 |
| MS.gene31055.t1 | MTR_4g074980 | 53.016 | 315 | 119 | 5 | 11 | 322 | 6 | 294 | 4.22e-108 | 317 |
| MS.gene31055.t1 | MTR_8g076820 | 52.475 | 303 | 134 | 3 | 28 | 322 | 30 | 330 | 8.94e-107 | 315 |
| MS.gene31055.t1 | MTR_5g017850 | 48.287 | 321 | 154 | 4 | 9 | 322 | 11 | 326 | 2.21e-102 | 303 |
| MS.gene31055.t1 | MTR_4g074980 | 59.274 | 248 | 97 | 3 | 11 | 254 | 6 | 253 | 3.37e-102 | 300 |
| MS.gene31055.t1 | MTR_4g125940 | 49.085 | 328 | 149 | 6 | 6 | 322 | 9 | 329 | 6.65e-102 | 302 |
| MS.gene31055.t1 | MTR_2g029815 | 48.193 | 332 | 157 | 4 | 4 | 322 | 1 | 330 | 1.23e-101 | 302 |
| MS.gene31055.t1 | MTR_2g040000 | 49.849 | 331 | 148 | 6 | 6 | 322 | 5 | 331 | 1.35e-101 | 301 |
| MS.gene31055.t1 | MTR_4g122640 | 49.508 | 305 | 146 | 3 | 24 | 322 | 34 | 336 | 3.71e-101 | 301 |
| MS.gene31055.t1 | MTR_5g017860 | 46.875 | 320 | 161 | 3 | 10 | 322 | 9 | 326 | 3.14e-100 | 298 |
| MS.gene31055.t1 | MTR_1g022970 | 48.684 | 304 | 145 | 3 | 28 | 322 | 46 | 347 | 9.69e-99 | 295 |
| MS.gene31055.t1 | MTR_5g014100 | 49.515 | 309 | 139 | 5 | 28 | 322 | 26 | 331 | 1.65e-98 | 294 |
| MS.gene31055.t1 | MTR_2g029800 | 47.289 | 332 | 160 | 4 | 4 | 322 | 1 | 330 | 1.75e-98 | 295 |
| MS.gene31055.t1 | MTR_2g029820 | 46.386 | 332 | 163 | 4 | 4 | 322 | 1 | 330 | 8.11e-98 | 293 |
| MS.gene31055.t1 | MTR_2g029750 | 47.590 | 332 | 159 | 5 | 4 | 322 | 1 | 330 | 1.09e-96 | 290 |
| MS.gene31055.t1 | MTR_2g029830 | 48.544 | 309 | 148 | 3 | 23 | 322 | 23 | 329 | 1.38e-96 | 290 |
| MS.gene31055.t1 | MTR_5g074860 | 50.000 | 318 | 109 | 9 | 9 | 321 | 13 | 285 | 1.94e-96 | 287 |
| MS.gene31055.t1 | MTR_2g029860 | 48.348 | 333 | 158 | 5 | 1 | 322 | 1 | 330 | 2.03e-96 | 289 |
| MS.gene31055.t1 | MTR_2g029560 | 48.693 | 306 | 146 | 4 | 26 | 322 | 22 | 325 | 2.60e-96 | 288 |
| MS.gene31055.t1 | MTR_4g030890 | 46.602 | 309 | 153 | 4 | 21 | 322 | 93 | 396 | 1.57e-94 | 286 |
| MS.gene31055.t1 | MTR_2g029740 | 46.084 | 332 | 164 | 5 | 4 | 322 | 1 | 330 | 2.57e-94 | 284 |
| MS.gene31055.t1 | MTR_4g031140 | 46.405 | 306 | 152 | 4 | 24 | 322 | 24 | 324 | 3.73e-94 | 283 |
| MS.gene31055.t1 | MTR_2g028980 | 47.678 | 323 | 157 | 5 | 9 | 322 | 11 | 330 | 1.78e-93 | 282 |
| MS.gene31055.t1 | MTR_2g029730 | 46.296 | 324 | 163 | 3 | 8 | 322 | 5 | 326 | 1.55e-92 | 279 |
| MS.gene31055.t1 | MTR_5g049280 | 44.268 | 314 | 157 | 6 | 23 | 322 | 28 | 337 | 2.80e-92 | 278 |
| MS.gene31055.t1 | MTR_4g125940 | 53.069 | 277 | 115 | 5 | 57 | 322 | 2 | 274 | 4.67e-92 | 275 |
| MS.gene31055.t1 | MTR_2g029850 | 45.783 | 332 | 165 | 4 | 4 | 322 | 1 | 330 | 1.37e-90 | 274 |
| MS.gene31055.t1 | MTR_2g029910 | 44.207 | 328 | 169 | 4 | 8 | 322 | 6 | 332 | 2.41e-90 | 274 |
| MS.gene31055.t1 | MTR_0155s0040 | 41.325 | 317 | 178 | 5 | 7 | 322 | 6 | 315 | 5.43e-84 | 256 |
| MS.gene31055.t1 | MTR_1g101830 | 42.121 | 330 | 175 | 7 | 1 | 322 | 1 | 322 | 2.74e-83 | 254 |
| MS.gene31055.t1 | MTR_3g092990 | 39.144 | 327 | 190 | 3 | 4 | 322 | 1 | 326 | 1.24e-82 | 253 |
| MS.gene31055.t1 | MTR_7g029030 | 41.066 | 319 | 181 | 4 | 8 | 322 | 5 | 320 | 3.67e-82 | 251 |
| MS.gene31055.t1 | MTR_1g077000 | 40.123 | 324 | 178 | 6 | 8 | 322 | 11 | 327 | 4.30e-81 | 249 |
| MS.gene31055.t1 | MTR_2g088770 | 43.082 | 318 | 167 | 7 | 14 | 322 | 13 | 325 | 8.29e-80 | 246 |
| MS.gene31055.t1 | MTR_4g046713 | 40.317 | 315 | 177 | 4 | 12 | 318 | 11 | 322 | 1.06e-79 | 246 |
| MS.gene31055.t1 | MTR_4g114210 | 42.813 | 327 | 165 | 8 | 11 | 322 | 1 | 320 | 1.21e-79 | 245 |
| MS.gene31055.t1 | MTR_1g025980 | 42.006 | 319 | 171 | 6 | 7 | 318 | 3 | 314 | 7.84e-79 | 243 |
| MS.gene31055.t1 | MTR_5g022870 | 41.945 | 329 | 163 | 9 | 9 | 322 | 1 | 316 | 2.11e-78 | 242 |
| MS.gene31055.t1 | MTR_8g075100 | 42.395 | 309 | 159 | 7 | 23 | 322 | 21 | 319 | 3.05e-77 | 239 |
| MS.gene31055.t1 | MTR_2g029830 | 47.674 | 258 | 124 | 3 | 74 | 322 | 6 | 261 | 4.98e-76 | 235 |
| MS.gene31055.t1 | MTR_2g008710 | 39.571 | 326 | 179 | 6 | 8 | 322 | 7 | 325 | 1.08e-73 | 230 |
| MS.gene31055.t1 | MTR_6g027440 | 37.224 | 317 | 188 | 4 | 11 | 322 | 4 | 314 | 1.09e-72 | 227 |
| MS.gene31055.t1 | MTR_7g107520 | 40.063 | 317 | 177 | 5 | 13 | 322 | 10 | 320 | 1.33e-72 | 227 |
| MS.gene31055.t1 | MTR_7g086820 | 38.255 | 298 | 180 | 3 | 26 | 322 | 18 | 312 | 4.16e-72 | 226 |
| MS.gene31055.t1 | MTR_1g009750 | 39.009 | 323 | 182 | 6 | 11 | 322 | 10 | 328 | 6.82e-72 | 226 |
| MS.gene31055.t1 | MTR_3g092990 | 37.309 | 327 | 185 | 4 | 4 | 322 | 1 | 315 | 8.75e-72 | 225 |
| MS.gene31055.t1 | MTR_1g086320 | 37.730 | 326 | 191 | 3 | 9 | 322 | 8 | 333 | 1.64e-70 | 222 |
| MS.gene31055.t1 | MTR_5g016010 | 37.910 | 335 | 181 | 7 | 1 | 318 | 1 | 325 | 2.38e-70 | 222 |
| MS.gene31055.t1 | MTR_2g437770 | 40.594 | 303 | 161 | 7 | 28 | 322 | 50 | 341 | 2.78e-70 | 222 |
| MS.gene31055.t1 | MTR_6g043280 | 40.803 | 299 | 166 | 6 | 28 | 322 | 41 | 332 | 3.78e-69 | 219 |
| MS.gene31055.t1 | MTR_3g072210 | 58.289 | 187 | 74 | 3 | 138 | 322 | 54 | 238 | 5.44e-69 | 215 |
| MS.gene31055.t1 | MTR_4g133800 | 39.735 | 302 | 164 | 6 | 29 | 322 | 42 | 333 | 5.50e-69 | 218 |
| MS.gene31055.t1 | MTR_1g038680 | 39.535 | 301 | 171 | 4 | 32 | 322 | 33 | 332 | 1.43e-68 | 217 |
| MS.gene31055.t1 | MTR_5g074700 | 51.101 | 227 | 93 | 6 | 99 | 322 | 3 | 214 | 3.53e-68 | 212 |
| MS.gene31055.t1 | MTR_4g087965 | 39.934 | 303 | 170 | 5 | 27 | 318 | 41 | 342 | 4.14e-68 | 216 |
| MS.gene31055.t1 | MTR_4g127670 | 38.961 | 308 | 169 | 6 | 27 | 322 | 23 | 323 | 1.73e-67 | 214 |
| MS.gene31055.t1 | MTR_6g043460 | 36.826 | 334 | 193 | 6 | 1 | 322 | 1 | 328 | 2.46e-66 | 212 |
| MS.gene31055.t1 | MTR_2g077990 | 36.667 | 330 | 171 | 6 | 28 | 320 | 76 | 404 | 3.04e-66 | 214 |
| MS.gene31055.t1 | MTR_4g095450 | 37.695 | 321 | 182 | 6 | 9 | 318 | 7 | 320 | 4.07e-66 | 211 |
| MS.gene31055.t1 | MTR_1g086490 | 37.126 | 334 | 189 | 5 | 9 | 322 | 8 | 340 | 5.18e-66 | 211 |
| MS.gene31055.t1 | MTR_2g099175 | 36.280 | 328 | 188 | 7 | 9 | 322 | 15 | 335 | 7.73e-66 | 210 |
| MS.gene31055.t1 | MTR_2g067440 | 35.866 | 329 | 174 | 6 | 28 | 321 | 60 | 386 | 8.84e-66 | 212 |
| MS.gene31055.t1 | MTR_7g086870 | 35.254 | 295 | 186 | 3 | 28 | 322 | 22 | 311 | 8.56e-65 | 207 |
| MS.gene31055.t1 | MTR_2g008160 | 38.535 | 314 | 174 | 7 | 21 | 322 | 17 | 323 | 3.64e-64 | 206 |
| MS.gene31055.t1 | MTR_1g090760 | 35.185 | 324 | 198 | 6 | 9 | 322 | 9 | 330 | 3.88e-64 | 206 |
| MS.gene31055.t1 | MTR_1g066710 | 35.548 | 301 | 188 | 4 | 26 | 322 | 25 | 323 | 4.20e-64 | 206 |
| MS.gene31055.t1 | MTR_4g132490 | 32.915 | 319 | 208 | 2 | 9 | 322 | 10 | 327 | 4.49e-64 | 206 |
| MS.gene31055.t1 | MTR_2g078610 | 35.736 | 333 | 170 | 8 | 28 | 320 | 76 | 404 | 5.72e-64 | 207 |
| MS.gene31055.t1 | MTR_0286s0010 | 34.472 | 322 | 192 | 6 | 14 | 322 | 19 | 334 | 8.95e-62 | 200 |
| MS.gene31055.t1 | MTR_6g008075 | 34.472 | 322 | 192 | 6 | 14 | 322 | 19 | 334 | 8.95e-62 | 200 |
| MS.gene31055.t1 | MTR_1g066380 | 34.426 | 305 | 186 | 4 | 26 | 322 | 25 | 323 | 3.34e-61 | 198 |
| MS.gene31055.t1 | MTR_1g009750 | 36.137 | 321 | 177 | 7 | 11 | 322 | 10 | 311 | 2.40e-60 | 195 |
| MS.gene31055.t1 | MTR_2g078280 | 35.849 | 318 | 166 | 6 | 28 | 308 | 76 | 392 | 3.71e-60 | 197 |
| MS.gene31055.t1 | MTR_8g062780 | 35.016 | 317 | 195 | 5 | 15 | 322 | 10 | 324 | 4.77e-60 | 195 |
| MS.gene31055.t1 | MTR_1g066640 | 34.426 | 305 | 186 | 4 | 26 | 322 | 25 | 323 | 1.36e-59 | 194 |
| MS.gene31055.t1 | MTR_1g066680 | 33.667 | 300 | 194 | 4 | 26 | 322 | 25 | 322 | 4.13e-59 | 192 |
| MS.gene31055.t1 | MTR_2g008730 | 36.503 | 326 | 165 | 6 | 8 | 322 | 7 | 301 | 5.07e-59 | 192 |
| MS.gene31055.t1 | MTR_7g072490 | 45.041 | 242 | 77 | 2 | 74 | 315 | 2 | 187 | 5.13e-59 | 189 |
| MS.gene31055.t1 | MTR_4g132110 | 33.231 | 325 | 200 | 5 | 9 | 322 | 10 | 328 | 2.18e-58 | 191 |
| MS.gene31055.t1 | MTR_3g105790 | 33.739 | 329 | 201 | 4 | 4 | 322 | 1 | 322 | 8.52e-58 | 189 |
| MS.gene31055.t1 | MTR_4g132110 | 32.727 | 330 | 200 | 6 | 9 | 322 | 10 | 333 | 3.58e-56 | 186 |
| MS.gene31055.t1 | MTR_6g043240 | 34.899 | 298 | 183 | 6 | 28 | 322 | 42 | 331 | 3.92e-56 | 186 |
| MS.gene31055.t1 | MTR_5g033470 | 36.449 | 321 | 174 | 8 | 22 | 322 | 67 | 377 | 6.48e-54 | 181 |
| MS.gene31055.t1 | MTR_2g008160 | 36.364 | 308 | 154 | 8 | 21 | 322 | 17 | 288 | 4.66e-53 | 176 |
| MS.gene31055.t1 | MTR_0147s0010 | 31.366 | 322 | 182 | 5 | 25 | 321 | 74 | 381 | 3.24e-52 | 176 |
| MS.gene31055.t1 | MTR_2g067450 | 34.177 | 316 | 169 | 10 | 28 | 321 | 11 | 309 | 7.10e-48 | 163 |
| MS.gene31055.t1 | MTR_1g066380 | 33.977 | 259 | 157 | 4 | 72 | 322 | 3 | 255 | 2.86e-47 | 160 |
| MS.gene31055.t1 | MTR_3g072260 | 66.055 | 109 | 37 | 0 | 27 | 135 | 25 | 133 | 6.68e-46 | 152 |
| MS.gene31055.t1 | MTR_2g008160 | 43.353 | 173 | 94 | 3 | 21 | 193 | 17 | 185 | 4.97e-42 | 145 |
| MS.gene31055.t1 | MTR_3g105790 | 35.950 | 242 | 142 | 3 | 91 | 322 | 8 | 246 | 1.03e-38 | 137 |
| MS.gene31055.t1 | MTR_2g029880 | 41.146 | 192 | 92 | 4 | 140 | 322 | 9 | 188 | 9.30e-38 | 134 |
| MS.gene31055.t1 | MTR_2g077980 | 29.818 | 275 | 146 | 8 | 90 | 320 | 11 | 282 | 6.45e-29 | 112 |
| MS.gene31055.t1 | MTR_2g078560 | 30.631 | 222 | 118 | 4 | 133 | 318 | 95 | 316 | 1.72e-27 | 109 |
| MS.gene31055.t1 | MTR_5g074770 | 48.980 | 98 | 47 | 2 | 226 | 321 | 12 | 108 | 1.18e-26 | 101 |
| MS.gene31055.t1 | MTR_3g462850 | 37.324 | 142 | 77 | 5 | 192 | 322 | 9 | 149 | 8.85e-24 | 95.5 |
| MS.gene31055.t1 | MTR_7g086790 | 42.500 | 120 | 65 | 3 | 75 | 194 | 17 | 132 | 3.36e-23 | 95.1 |
| MS.gene31055.t1 | MTR_4g114220 | 39.855 | 138 | 59 | 4 | 40 | 169 | 15 | 136 | 1.73e-22 | 91.7 |
| MS.gene31055.t1 | MTR_4g031040 | 35.673 | 171 | 71 | 4 | 89 | 259 | 3 | 134 | 1.39e-21 | 89.0 |
| MS.gene31055.t1 | MTR_5g058120 | 33.121 | 157 | 95 | 3 | 164 | 318 | 7 | 155 | 9.66e-20 | 87.4 |
| MS.gene31055.t1 | MTR_6g048160 | 55.556 | 72 | 28 | 2 | 67 | 138 | 22 | 89 | 4.56e-19 | 80.9 |
| MS.gene31055.t1 | MTR_1g089005 | 38.636 | 132 | 74 | 2 | 14 | 139 | 1 | 131 | 7.02e-19 | 82.4 |
| MS.gene31055.t1 | MTR_3g107060 | 26.374 | 273 | 132 | 9 | 44 | 301 | 92 | 310 | 8.26e-18 | 82.8 |
| MS.gene31055.t1 | MTR_1g098320 | 44.737 | 76 | 42 | 0 | 243 | 318 | 45 | 120 | 2.05e-17 | 78.2 |
| MS.gene31055.t1 | MTR_2g029930 | 37.069 | 116 | 41 | 4 | 14 | 111 | 1 | 102 | 1.61e-16 | 74.3 |
| MS.gene31055.t1 | MTR_7g107500 | 42.857 | 84 | 47 | 1 | 239 | 322 | 15 | 97 | 1.49e-14 | 68.9 |
| MS.gene31055.t1 | MTR_5g022510 | 26.087 | 253 | 133 | 9 | 62 | 304 | 34 | 242 | 2.60e-14 | 72.4 |
| MS.gene31055.t1 | MTR_5g022510 | 27.184 | 206 | 105 | 7 | 109 | 304 | 47 | 217 | 7.05e-14 | 70.9 |
| MS.gene31055.t1 | MTR_7g086810 | 30.000 | 120 | 58 | 1 | 26 | 145 | 4 | 97 | 7.42e-14 | 70.5 |
| MS.gene31055.t1 | MTR_7g086785 | 29.787 | 141 | 93 | 2 | 74 | 214 | 4 | 138 | 1.22e-13 | 67.4 |
| MS.gene31055.t1 | MTR_4g012865 | 39.437 | 71 | 43 | 0 | 25 | 95 | 74 | 144 | 3.14e-13 | 66.6 |
| MS.gene31055.t1 | MTR_0147s0040 | 37.662 | 77 | 48 | 0 | 244 | 320 | 5 | 81 | 2.02e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31055.t1 | AT5G05340 | 77.441 | 297 | 67 | 0 | 26 | 322 | 28 | 324 | 4.28e-174 | 485 |
| MS.gene31055.t1 | AT5G58400 | 61.709 | 316 | 120 | 1 | 8 | 322 | 10 | 325 | 1.06e-143 | 408 |
| MS.gene31055.t1 | AT5G58390 | 56.825 | 315 | 135 | 1 | 9 | 322 | 2 | 316 | 1.87e-130 | 374 |
| MS.gene31055.t1 | AT1G14550 | 54.259 | 317 | 137 | 5 | 9 | 322 | 10 | 321 | 6.33e-120 | 348 |
| MS.gene31055.t1 | AT5G06720 | 54.128 | 327 | 138 | 5 | 6 | 322 | 9 | 333 | 1.08e-119 | 348 |
| MS.gene31055.t1 | AT1G14540 | 53.698 | 311 | 140 | 3 | 14 | 322 | 7 | 315 | 1.75e-118 | 344 |
| MS.gene31055.t1 | AT5G06730 | 51.220 | 328 | 146 | 5 | 6 | 322 | 10 | 334 | 3.35e-114 | 335 |
| MS.gene31055.t1 | AT4G36430 | 49.843 | 319 | 150 | 3 | 12 | 322 | 14 | 330 | 1.24e-110 | 325 |
| MS.gene31055.t1 | AT2G18150 | 49.191 | 309 | 147 | 3 | 22 | 322 | 30 | 336 | 4.29e-108 | 318 |
| MS.gene31055.t1 | AT2G18140 | 49.032 | 310 | 148 | 3 | 21 | 322 | 28 | 335 | 8.97e-107 | 315 |
| MS.gene31055.t1 | AT5G66390 | 49.505 | 303 | 143 | 3 | 28 | 322 | 33 | 333 | 1.81e-105 | 311 |
| MS.gene31055.t1 | AT3G50990 | 50.974 | 308 | 141 | 4 | 23 | 322 | 36 | 341 | 3.68e-105 | 311 |
| MS.gene31055.t1 | AT1G44970 | 51.282 | 312 | 141 | 3 | 20 | 322 | 37 | 346 | 1.29e-104 | 310 |
| MS.gene31055.t1 | AT1G49570 | 49.338 | 302 | 143 | 3 | 26 | 318 | 46 | 346 | 1.15e-99 | 297 |
| MS.gene31055.t1 | AT4G16270 | 50.000 | 304 | 138 | 5 | 28 | 322 | 50 | 348 | 1.48e-98 | 295 |
| MS.gene31055.t1 | AT4G08770 | 48.882 | 313 | 147 | 4 | 21 | 322 | 17 | 327 | 1.49e-98 | 295 |
| MS.gene31055.t1 | AT4G08780 | 47.742 | 310 | 149 | 4 | 24 | 322 | 20 | 327 | 2.77e-97 | 291 |
| MS.gene31055.t1 | AT5G19890 | 49.524 | 315 | 140 | 6 | 19 | 322 | 21 | 327 | 3.55e-97 | 290 |
| MS.gene31055.t1 | AT2G38390 | 46.828 | 331 | 160 | 7 | 4 | 322 | 7 | 333 | 7.43e-97 | 290 |
| MS.gene31055.t1 | AT3G32980 | 47.516 | 322 | 154 | 5 | 14 | 322 | 15 | 334 | 1.59e-96 | 290 |
| MS.gene31055.t1 | AT2G35380 | 46.519 | 316 | 154 | 3 | 20 | 322 | 22 | 335 | 3.36e-96 | 288 |
| MS.gene31055.t1 | AT1G68850 | 42.810 | 306 | 164 | 3 | 28 | 322 | 30 | 335 | 8.66e-96 | 287 |
| MS.gene31055.t1 | AT2G38380 | 46.201 | 329 | 165 | 5 | 4 | 322 | 7 | 333 | 5.68e-95 | 285 |
| MS.gene31055.t1 | AT5G19880 | 46.584 | 322 | 157 | 5 | 14 | 322 | 10 | 329 | 6.57e-95 | 285 |
| MS.gene31055.t1 | AT2G22420 | 43.653 | 323 | 170 | 4 | 7 | 322 | 2 | 319 | 3.19e-92 | 278 |
| MS.gene31055.t1 | AT3G49120 | 46.130 | 323 | 161 | 4 | 11 | 322 | 15 | 335 | 5.90e-92 | 278 |
| MS.gene31055.t1 | AT3G49110 | 44.753 | 324 | 166 | 4 | 10 | 322 | 15 | 336 | 1.74e-90 | 274 |
| MS.gene31055.t1 | AT3G01190 | 41.538 | 325 | 174 | 7 | 7 | 322 | 4 | 321 | 1.21e-81 | 250 |
| MS.gene31055.t1 | AT5G42180 | 42.006 | 319 | 170 | 7 | 11 | 321 | 5 | 316 | 1.86e-79 | 244 |
| MS.gene31055.t1 | AT5G15180 | 40.584 | 308 | 169 | 6 | 24 | 322 | 27 | 329 | 3.98e-79 | 244 |
| MS.gene31055.t1 | AT5G51890 | 40.810 | 321 | 176 | 6 | 9 | 322 | 9 | 322 | 1.18e-78 | 243 |
| MS.gene31055.t1 | AT5G64120 | 42.617 | 298 | 156 | 6 | 32 | 322 | 39 | 328 | 4.46e-78 | 241 |
| MS.gene31055.t1 | AT2G41480 | 39.514 | 329 | 178 | 8 | 8 | 322 | 7 | 328 | 5.49e-77 | 239 |
| MS.gene31055.t1 | AT4G33420 | 39.683 | 315 | 182 | 5 | 9 | 322 | 18 | 325 | 1.01e-76 | 238 |
| MS.gene31055.t1 | AT4G33420 | 39.683 | 315 | 182 | 5 | 9 | 322 | 65 | 372 | 3.69e-76 | 238 |
| MS.gene31055.t1 | AT1G05240 | 39.535 | 301 | 167 | 5 | 28 | 318 | 26 | 321 | 3.60e-75 | 234 |
| MS.gene31055.t1 | AT1G05250 | 39.535 | 301 | 167 | 5 | 28 | 318 | 26 | 321 | 3.60e-75 | 234 |
| MS.gene31055.t1 | AT1G71695 | 41.806 | 299 | 167 | 4 | 28 | 322 | 44 | 339 | 2.29e-74 | 233 |
| MS.gene31055.t1 | AT5G17820 | 38.170 | 317 | 177 | 5 | 13 | 322 | 9 | 313 | 3.41e-74 | 231 |
| MS.gene31055.t1 | AT5G14130 | 37.771 | 323 | 186 | 5 | 11 | 322 | 12 | 330 | 6.18e-74 | 231 |
| MS.gene31055.t1 | AT1G05260 | 38.988 | 336 | 177 | 9 | 4 | 322 | 1 | 325 | 7.43e-74 | 231 |
| MS.gene31055.t1 | AT5G14130 | 37.771 | 323 | 186 | 5 | 11 | 322 | 53 | 371 | 1.81e-73 | 231 |
| MS.gene31055.t1 | AT5G17820 | 38.170 | 317 | 177 | 5 | 13 | 322 | 62 | 366 | 2.50e-73 | 231 |
| MS.gene31055.t1 | AT3G03670 | 38.957 | 326 | 182 | 5 | 8 | 322 | 2 | 321 | 5.33e-73 | 228 |
| MS.gene31055.t1 | AT4G11290 | 37.152 | 323 | 192 | 4 | 9 | 322 | 6 | 326 | 8.36e-72 | 225 |
| MS.gene31055.t1 | AT2G35380 | 47.561 | 246 | 114 | 3 | 90 | 322 | 4 | 247 | 1.83e-71 | 222 |
| MS.gene31055.t1 | AT2G18980 | 38.298 | 329 | 184 | 7 | 5 | 322 | 3 | 323 | 5.12e-71 | 223 |
| MS.gene31055.t1 | AT3G21770 | 38.907 | 311 | 171 | 7 | 20 | 318 | 21 | 324 | 8.18e-71 | 223 |
| MS.gene31055.t1 | AT4G37530 | 39.297 | 313 | 168 | 5 | 21 | 318 | 20 | 325 | 1.50e-70 | 222 |
| MS.gene31055.t1 | AT3G49960 | 38.138 | 333 | 183 | 6 | 1 | 318 | 1 | 325 | 1.65e-70 | 222 |
| MS.gene31055.t1 | AT5G40150 | 38.816 | 304 | 180 | 4 | 23 | 322 | 27 | 328 | 2.78e-70 | 221 |
| MS.gene31055.t1 | AT1G77100 | 40.615 | 325 | 174 | 9 | 11 | 322 | 1 | 319 | 3.29e-70 | 221 |
| MS.gene31055.t1 | AT4G30170 | 39.482 | 309 | 167 | 6 | 26 | 322 | 25 | 325 | 3.71e-70 | 221 |
| MS.gene31055.t1 | AT4G33870 | 34.821 | 336 | 176 | 4 | 26 | 320 | 66 | 399 | 5.26e-70 | 223 |
| MS.gene31055.t1 | AT4G26010 | 38.710 | 310 | 181 | 4 | 14 | 322 | 8 | 309 | 8.44e-70 | 220 |
| MS.gene31055.t1 | AT5G39580 | 40.557 | 323 | 173 | 9 | 9 | 322 | 7 | 319 | 1.13e-69 | 219 |
| MS.gene31055.t1 | AT4G26010 | 38.710 | 310 | 181 | 4 | 14 | 322 | 36 | 337 | 1.86e-69 | 220 |
| MS.gene31055.t1 | AT5G47000 | 37.855 | 317 | 190 | 4 | 11 | 322 | 16 | 330 | 2.72e-69 | 219 |
| MS.gene31055.t1 | AT4G17690 | 39.216 | 306 | 182 | 3 | 20 | 322 | 18 | 322 | 2.79e-69 | 219 |
| MS.gene31055.t1 | AT3G28200 | 37.294 | 303 | 185 | 4 | 23 | 322 | 16 | 316 | 3.71e-68 | 216 |
| MS.gene31055.t1 | AT5G67400 | 37.690 | 329 | 190 | 6 | 1 | 318 | 1 | 325 | 9.40e-68 | 215 |
| MS.gene31055.t1 | AT1G30870 | 38.361 | 305 | 168 | 6 | 28 | 322 | 51 | 345 | 2.70e-67 | 214 |
| MS.gene31055.t1 | AT2G34060 | 40.523 | 306 | 170 | 5 | 25 | 319 | 39 | 343 | 3.04e-67 | 214 |
| MS.gene31055.t1 | AT4G37520 | 38.312 | 308 | 168 | 6 | 26 | 318 | 25 | 325 | 3.86e-67 | 213 |
| MS.gene31055.t1 | AT1G24110 | 36.111 | 324 | 193 | 5 | 11 | 322 | 1 | 322 | 1.19e-65 | 209 |
| MS.gene31055.t1 | AT4G37520 | 37.338 | 308 | 168 | 6 | 26 | 318 | 25 | 322 | 4.47e-65 | 208 |
| MS.gene31055.t1 | AT1G34510 | 37.500 | 304 | 181 | 6 | 20 | 322 | 14 | 309 | 1.02e-64 | 207 |
| MS.gene31055.t1 | AT4G25980 | 36.111 | 324 | 187 | 8 | 12 | 322 | 10 | 326 | 6.39e-64 | 205 |
| MS.gene31055.t1 | AT4G31760 | 35.061 | 328 | 196 | 4 | 4 | 322 | 7 | 326 | 2.45e-63 | 204 |
| MS.gene31055.t1 | AT2G39040 | 38.339 | 313 | 179 | 7 | 22 | 322 | 40 | 350 | 3.30e-62 | 201 |
| MS.gene31055.t1 | AT2G24800 | 37.377 | 305 | 179 | 4 | 26 | 322 | 29 | 329 | 8.13e-61 | 197 |
| MS.gene31055.t1 | AT5G64110 | 37.309 | 327 | 179 | 7 | 14 | 322 | 12 | 330 | 1.75e-60 | 196 |
| MS.gene31055.t1 | AT4G37530 | 40.602 | 266 | 136 | 5 | 21 | 271 | 20 | 278 | 1.93e-60 | 195 |
| MS.gene31055.t1 | AT5G64100 | 36.877 | 301 | 170 | 6 | 32 | 322 | 41 | 331 | 4.89e-60 | 195 |
| MS.gene31055.t1 | AT4G21960 | 34.323 | 303 | 185 | 4 | 28 | 322 | 31 | 327 | 1.09e-58 | 192 |
| MS.gene31055.t1 | AT2G43480 | 32.945 | 343 | 193 | 8 | 9 | 322 | 1 | 335 | 7.34e-58 | 190 |
| MS.gene31055.t1 | AT2G37130 | 32.692 | 312 | 199 | 6 | 17 | 322 | 21 | 327 | 6.52e-57 | 187 |
| MS.gene31055.t1 | AT5G24070 | 33.735 | 332 | 194 | 8 | 9 | 322 | 12 | 335 | 2.08e-56 | 186 |
| MS.gene31055.t1 | AT3G17070 | 33.951 | 324 | 198 | 6 | 14 | 322 | 17 | 339 | 1.16e-55 | 184 |
| MS.gene31055.t1 | AT2G37130 | 32.660 | 297 | 191 | 5 | 32 | 322 | 3 | 296 | 3.22e-55 | 182 |
| MS.gene31055.t1 | AT5G22410 | 35.562 | 329 | 188 | 12 | 7 | 321 | 6 | 324 | 5.98e-55 | 182 |
| MS.gene31055.t1 | AT5G39580 | 38.362 | 232 | 133 | 5 | 9 | 240 | 7 | 228 | 1.16e-44 | 152 |
| MS.gene31055.t1 | AT4G25980 | 40.217 | 184 | 106 | 3 | 12 | 195 | 55 | 234 | 2.91e-41 | 145 |
| MS.gene31055.t1 | AT3G17070 | 31.801 | 261 | 168 | 5 | 70 | 322 | 18 | 276 | 9.23e-39 | 138 |
| MS.gene31055.t1 | AT2G24800 | 41.071 | 168 | 95 | 1 | 26 | 193 | 29 | 192 | 8.41e-38 | 135 |
| MS.gene31055.t1 | AT3G42570 | 38.462 | 91 | 55 | 1 | 104 | 193 | 57 | 147 | 2.07e-15 | 72.8 |
| MS.gene31055.t1 | AT4G35970 | 25.197 | 254 | 133 | 8 | 62 | 304 | 33 | 240 | 9.16e-15 | 73.6 |
| MS.gene31055.t1 | AT4G35970 | 26.068 | 234 | 116 | 8 | 62 | 284 | 33 | 220 | 2.00e-13 | 68.9 |
Find 86 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTATCTGTTCTCATAAT+AGG | 0.139329 | 3.3:+78591979 | MS.gene31055:CDS |
| CCACGAGCAGAGTTTCTATT+TGG | 0.150735 | 3.3:-78592424 | None:intergenic |
| GATGACACATCAAGCTTTAC+TGG | 0.225638 | 3.3:+78592385 | MS.gene31055:CDS |
| AGAGAGTTTGGGACAAGTTT+TGG | 0.290073 | 3.3:-78592037 | None:intergenic |
| TCCCCTGATCCTGATGCCTT+TGG | 0.297710 | 3.3:-78593033 | None:intergenic |
| TTTCACTGTGGTAGAGAGTT+TGG | 0.308285 | 3.3:-78592049 | None:intergenic |
| GCTAATCTAGAACAATTTAA+AGG | 0.310910 | 3.3:-78591943 | None:intergenic |
| AAGCAAGGTGCACTAACTTT+AGG | 0.315415 | 3.3:+78592947 | MS.gene31055:CDS |
| CCCCTGATCCTGATGCCTTT+GGG | 0.331723 | 3.3:-78593032 | None:intergenic |
| TTCTATCTGTTCTCATAATA+GGG | 0.338026 | 3.3:+78591980 | MS.gene31055:CDS |
| CAATGTGACCAAATCCTTGC+TGG | 0.359724 | 3.3:-78592776 | None:intergenic |
| AGGATCAGGGGACAACAATT+TGG | 0.366559 | 3.3:+78593044 | MS.gene31055:CDS |
| TGCCCAAAGGCATCAGGATC+AGG | 0.367698 | 3.3:+78593030 | MS.gene31055:CDS |
| CATTCGGGCCTCCTTTGATA+TGG | 0.369430 | 3.3:-78592088 | None:intergenic |
| AAGGATTTGGTCACATTGTC+AGG | 0.376723 | 3.3:+78592781 | MS.gene31055:CDS |
| TTCACTGTGGTAGAGAGTTT+GGG | 0.382072 | 3.3:-78592048 | None:intergenic |
| TTGAGGTTGGAAGTTGGTGC+TGG | 0.389387 | 3.3:-78592718 | None:intergenic |
| AGCAAGGTGCACTAACTTTA+GGG | 0.395482 | 3.3:+78592948 | MS.gene31055:CDS |
| TGGTCTTTCCAGCAAGGATT+TGG | 0.396887 | 3.3:+78592768 | MS.gene31055:CDS |
| TAGATTAGCCATGATCAGTT+TGG | 0.401228 | 3.3:+78591957 | MS.gene31055:CDS |
| CACGAGCAGAGTTTCTATTT+GGG | 0.402776 | 3.3:-78592423 | None:intergenic |
| ATTTAAACTTAAATATTAGT+TGG | 0.419303 | 3.3:-78593313 | None:intergenic |
| TTTAGCTTGGAGGTCCAACC+TGG | 0.429670 | 3.3:+78592632 | MS.gene31055:intron |
| TGAACAGGTGGACACACAAT+TGG | 0.432448 | 3.3:+78592922 | MS.gene31055:intron |
| GAGGATAGAAGCACCCATTC+GGG | 0.437322 | 3.3:-78592103 | None:intergenic |
| TCAAATTGCCCAAAGGCATC+AGG | 0.463959 | 3.3:+78593024 | MS.gene31055:CDS |
| TGTTGTGTTGTTTAGCTTGG+AGG | 0.467863 | 3.3:+78592622 | MS.gene31055:intron |
| CCTGATCTCTCCATTTGATC+CGG | 0.472052 | 3.3:-78593274 | None:intergenic |
| AAACCTCTCACCGGATCAAA+TGG | 0.474986 | 3.3:+78593264 | MS.gene31055:CDS |
| CCAACCTGGAATGTAAAACT+TGG | 0.477614 | 3.3:+78592646 | MS.gene31055:CDS |
| TGGAAGAAGAGATGCTAAAA+CGG | 0.480930 | 3.3:+78592666 | MS.gene31055:CDS |
| GGAGGATAGAAGCACCCATT+CGG | 0.481217 | 3.3:-78592104 | None:intergenic |
| TAGTTGTTGTCAAAAGAAGT+AGG | 0.483476 | 3.3:-78593087 | None:intergenic |
| CGCCGTTGGTCTTTCCAGCA+AGG | 0.488220 | 3.3:+78592762 | MS.gene31055:CDS |
| GTTGGAAGTTGGTGCTGGGA+TGG | 0.488543 | 3.3:-78592713 | None:intergenic |
| CCGGATCAAATGGAGAGATC+AGG | 0.489446 | 3.3:+78593274 | MS.gene31055:CDS |
| AGTTGTTGTCAAAAGAAGTA+GGG | 0.492854 | 3.3:-78593086 | None:intergenic |
| ACCTCAATGTTTAGCGCCGT+TGG | 0.493682 | 3.3:+78592748 | MS.gene31055:CDS |
| TGAGGTGAGTGTATTGAGGT+TGG | 0.493828 | 3.3:-78592731 | None:intergenic |
| TGCCGCTGCTATGATCAAGA+TGG | 0.496335 | 3.3:+78593233 | MS.gene31055:CDS |
| AGTGTATTGAGGTTGGAAGT+TGG | 0.502920 | 3.3:-78592724 | None:intergenic |
| TCAGCACATGAGACAACTCC+GGG | 0.503282 | 3.3:-78592493 | None:intergenic |
| AGATAGAACCAAACTGATCA+TGG | 0.508325 | 3.3:-78591965 | None:intergenic |
| CAAGAACCTTGTTCAGAACA+AGG | 0.510966 | 3.3:+78593113 | MS.gene31055:CDS |
| TGAGGTTGGAAGTTGGTGCT+GGG | 0.515449 | 3.3:-78592717 | None:intergenic |
| ACCACTCACTATTGAGTTGG+TGG | 0.516561 | 3.3:-78593175 | None:intergenic |
| TTGAAATTGCAGGGATGTGA+TGG | 0.527302 | 3.3:+78592349 | MS.gene31055:intron |
| CATATCAAAGGAGGCCCGAA+TGG | 0.532190 | 3.3:+78592089 | MS.gene31055:CDS |
| GCCGCTGCTATGATCAAGAT+GGG | 0.536610 | 3.3:+78593234 | MS.gene31055:CDS |
| AGCAAATGCAGCATTTATGT+TGG | 0.537064 | 3.3:-78592989 | None:intergenic |
| ACTTGTAGAAAGTTGTGCAT+TGG | 0.538174 | 3.3:-78592007 | None:intergenic |
| ATGTGATGGATCAATTCTCT+TGG | 0.538296 | 3.3:+78592363 | MS.gene31055:CDS |
| ATATCAAAGGAGGCCCGAAT+GGG | 0.543061 | 3.3:+78592090 | MS.gene31055:CDS |
| GCCCAAAGGCATCAGGATCA+GGG | 0.544250 | 3.3:+78593031 | MS.gene31055:CDS |
| TCTCCATTTGATCCGGTGAG+AGG | 0.565633 | 3.3:-78593267 | None:intergenic |
| CCAAATAGAAACTCTGCTCG+TGG | 0.581384 | 3.3:+78592424 | MS.gene31055:CDS |
| ATAACCACTCACTATTGAGT+TGG | 0.582034 | 3.3:-78593178 | None:intergenic |
| ATCAGCACATGAGACAACTC+CGG | 0.595096 | 3.3:-78592494 | None:intergenic |
| ACATTGAGGTGAGTGTATTG+AGG | 0.600421 | 3.3:-78592735 | None:intergenic |
| GTAGGGGTCTGAAGATCAAG+AGG | 0.601828 | 3.3:-78593069 | None:intergenic |
| TGATATGGCAGTTTGTAGTG+TGG | 0.608611 | 3.3:-78592073 | None:intergenic |
| GACACACAATTGGACAAGCA+AGG | 0.609025 | 3.3:+78592932 | MS.gene31055:CDS |
| AAGAACCTTGTTCAGAACAA+GGG | 0.610050 | 3.3:+78593114 | MS.gene31055:CDS |
| ATCCTTGCTGGAAAGACCAA+CGG | 0.610155 | 3.3:-78592764 | None:intergenic |
| GGAGATATTAAACCTCTCAC+CGG | 0.610656 | 3.3:+78593255 | MS.gene31055:CDS |
| GAAGACCCTTGTTCTGAACA+AGG | 0.613843 | 3.3:-78593119 | None:intergenic |
| GCCGTAGAGAACGTATGCCC+CGG | 0.614098 | 3.3:+78592475 | MS.gene31055:CDS |
| CATAGCAGCGGCAAAATCAG+AGG | 0.614979 | 3.3:-78593223 | None:intergenic |
| ACTACAAACTGCCATATCAA+AGG | 0.619874 | 3.3:+78592077 | MS.gene31055:CDS |
| AGCAATCGTGGAAGAACAAG+CGG | 0.622282 | 3.3:-78592125 | None:intergenic |
| TCCGGGGCATACGTTCTCTA+CGG | 0.624550 | 3.3:-78592476 | None:intergenic |
| CCCAAAGGCATCAGGATCAG+GGG | 0.627223 | 3.3:+78593032 | MS.gene31055:CDS |
| AGTCTGCGGCAGCAATAGCA+AGG | 0.631012 | 3.3:-78592519 | None:intergenic |
| ACCAACGGCGCTAAACATTG+AGG | 0.633810 | 3.3:-78592749 | None:intergenic |
| TTACATTGACAAAGCAATCG+TGG | 0.634168 | 3.3:-78592137 | None:intergenic |
| TCCCATCTTGATCATAGCAG+CGG | 0.634299 | 3.3:-78593235 | None:intergenic |
| TACAATTGCAACAGAGTCTG+CGG | 0.641374 | 3.3:-78592533 | None:intergenic |
| GTTGTTGTCAAAAGAAGTAG+GGG | 0.641646 | 3.3:-78593085 | None:intergenic |
| GAGGCAATCAAATTGCCCAA+AGG | 0.672476 | 3.3:+78593017 | MS.gene31055:CDS |
| ACAAACTGCCATATCAAAGG+AGG | 0.679028 | 3.3:+78592080 | MS.gene31055:CDS |
| TCCACCAACTCAATAGTGAG+TGG | 0.679546 | 3.3:+78593174 | MS.gene31055:CDS |
| TGGGATGGCAGTGTTAGCAG+CGG | 0.688826 | 3.3:-78592698 | None:intergenic |
| ATGCTGCATTTGCTAGCACG+AGG | 0.690267 | 3.3:+78592998 | MS.gene31055:CDS |
| AATCGTGGAAGAACAAGCGG+AGG | 0.704179 | 3.3:-78592122 | None:intergenic |
| TTGTAGTGTGGATTTCACTG+TGG | 0.710735 | 3.3:-78592061 | None:intergenic |
| CAGCACATGAGACAACTCCG+GGG | 0.822796 | 3.3:-78592492 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATTTTGATAAGTTTTT+AGG | + | chr3.3:78592196-78592215 | MS.gene31055:intron | 10.0% |
| !!! | TTTTTACTTATATTTAAAGT+CGG | + | chr3.3:78592839-78592858 | MS.gene31055:intron | 10.0% |
| !!! | TGATTGGTTAATTAATTCAT+TGG | - | chr3.3:78592573-78592592 | None:intergenic | 20.0% |
| ! | ATAATATGTGTGAAAAGACT+TGG | - | chr3.3:78592244-78592263 | None:intergenic | 25.0% |
| ! | TTCTATCTGTTCTCATAATA+GGG | + | chr3.3:78591980-78591999 | MS.gene31055:CDS | 25.0% |
| !! | GCTAATCTAGAACAATTTAA+AGG | - | chr3.3:78591946-78591965 | None:intergenic | 25.0% |
| AGTTGTTGTCAAAAGAAGTA+GGG | - | chr3.3:78593089-78593108 | None:intergenic | 30.0% | |
| GAAGTCTTAATTGATTGAAC+AGG | + | chr3.3:78592907-78592926 | MS.gene31055:intron | 30.0% | |
| GTTCTATCTGTTCTCATAAT+AGG | + | chr3.3:78591979-78591998 | MS.gene31055:CDS | 30.0% | |
| TAAACAACACAACATTTGCA+TGG | - | chr3.3:78592616-78592635 | None:intergenic | 30.0% | |
| TAGTTGTTGTCAAAAGAAGT+AGG | - | chr3.3:78593090-78593109 | None:intergenic | 30.0% | |
| ! | CAGGTATCGTTATATTGATT+TGG | + | chr3.3:78592800-78592819 | MS.gene31055:intron | 30.0% |
| ! | TAAAAAGTTGTTGGTCTGAA+TGG | - | chr3.3:78593146-78593165 | None:intergenic | 30.0% |
| ! | TCAGACCAACAACTTTTTAA+CGG | + | chr3.3:78593147-78593166 | MS.gene31055:CDS | 30.0% |
| !! | AAATGTTGTGTTGTTTAGCT+TGG | + | chr3.3:78592619-78592638 | MS.gene31055:intron | 30.0% |
| AAATCAGAGGAAAAAGAGCT+TGG | - | chr3.3:78593213-78593232 | None:intergenic | 35.0% | |
| AAGAACCTTGTTCAGAACAA+GGG | + | chr3.3:78593114-78593133 | MS.gene31055:CDS | 35.0% | |
| AATCAGAGGAAAAAGAGCTT+GGG | - | chr3.3:78593212-78593231 | None:intergenic | 35.0% | |
| ACTACAAACTGCCATATCAA+AGG | + | chr3.3:78592077-78592096 | MS.gene31055:CDS | 35.0% | |
| ACTTGTAGAAAGTTGTGCAT+TGG | - | chr3.3:78592010-78592029 | None:intergenic | 35.0% | |
| AGATAGAACCAAACTGATCA+TGG | - | chr3.3:78591968-78591987 | None:intergenic | 35.0% | |
| AGCAAATGCAGCATTTATGT+TGG | - | chr3.3:78592992-78593011 | None:intergenic | 35.0% | |
| ATAACCACTCACTATTGAGT+TGG | - | chr3.3:78593181-78593200 | None:intergenic | 35.0% | |
| GTCTTAATTGATTGAACAGG+TGG | + | chr3.3:78592910-78592929 | MS.gene31055:intron | 35.0% | |
| GTTGTTGTCAAAAGAAGTAG+GGG | - | chr3.3:78593088-78593107 | None:intergenic | 35.0% | |
| TACTCATTTCTCAATCGAGA+AGG | + | chr3.3:78592868-78592887 | MS.gene31055:intron | 35.0% | |
| TGGAAGAAGAGATGCTAAAA+CGG | + | chr3.3:78592666-78592685 | MS.gene31055:CDS | 35.0% | |
| TTACATTGACAAAGCAATCG+TGG | - | chr3.3:78592140-78592159 | None:intergenic | 35.0% | |
| TTGTACGCATTGAAATTGCA+GGG | + | chr3.3:78592340-78592359 | MS.gene31055:intron | 35.0% | |
| TTTGTACGCATTGAAATTGC+AGG | + | chr3.3:78592339-78592358 | MS.gene31055:intron | 35.0% | |
| ! | TAGATTAGCCATGATCAGTT+TGG | + | chr3.3:78591957-78591976 | MS.gene31055:CDS | 35.0% |
| ! | TCTTCCAAGTTTTACATTCC+AGG | - | chr3.3:78592653-78592672 | None:intergenic | 35.0% |
| !! | ATGTGATGGATCAATTCTCT+TGG | + | chr3.3:78592363-78592382 | MS.gene31055:CDS | 35.0% |
| !! | TGCACTAGCTAGATTTTGAT+TGG | - | chr3.3:78592589-78592608 | None:intergenic | 35.0% |
| AAGCAAGGTGCACTAACTTT+AGG | + | chr3.3:78592947-78592966 | MS.gene31055:CDS | 40.0% | |
| ACAAACTGCCATATCAAAGG+AGG | + | chr3.3:78592080-78592099 | MS.gene31055:CDS | 40.0% | |
| ACATTGAGGTGAGTGTATTG+AGG | - | chr3.3:78592738-78592757 | None:intergenic | 40.0% | |
| AGCAAGGTGCACTAACTTTA+GGG | + | chr3.3:78592948-78592967 | MS.gene31055:CDS | 40.0% | |
| AGTGTATTGAGGTTGGAAGT+TGG | - | chr3.3:78592727-78592746 | None:intergenic | 40.0% | |
| CAAGAACCTTGTTCAGAACA+AGG | + | chr3.3:78593113-78593132 | MS.gene31055:CDS | 40.0% | |
| CACGAGCAGAGTTTCTATTT+GGG | - | chr3.3:78592426-78592445 | None:intergenic | 40.0% | |
| CCAACCTGGAATGTAAAACT+TGG | + | chr3.3:78592646-78592665 | MS.gene31055:CDS | 40.0% | |
| GATGACACATCAAGCTTTAC+TGG | + | chr3.3:78592385-78592404 | MS.gene31055:CDS | 40.0% | |
| GGAGATATTAAACCTCTCAC+CGG | + | chr3.3:78593255-78593274 | MS.gene31055:CDS | 40.0% | |
| TACAATTGCAACAGAGTCTG+CGG | - | chr3.3:78592536-78592555 | None:intergenic | 40.0% | |
| TGATATGGCAGTTTGTAGTG+TGG | - | chr3.3:78592076-78592095 | None:intergenic | 40.0% | |
| TTCACTGTGGTAGAGAGTTT+GGG | - | chr3.3:78592051-78592070 | None:intergenic | 40.0% | |
| TTGAAATTGCAGGGATGTGA+TGG | + | chr3.3:78592349-78592368 | MS.gene31055:intron | 40.0% | |
| TTGTAGTGTGGATTTCACTG+TGG | - | chr3.3:78592064-78592083 | None:intergenic | 40.0% | |
| TTTCACTGTGGTAGAGAGTT+TGG | - | chr3.3:78592052-78592071 | None:intergenic | 40.0% | |
| ! | AAGGATTTGGTCACATTGTC+AGG | + | chr3.3:78592781-78592800 | MS.gene31055:CDS | 40.0% |
| ! | ACCAACAACTTTTTAACGGC+GGG | + | chr3.3:78593151-78593170 | MS.gene31055:CDS | 40.0% |
| ! | CCAAGTTTTACATTCCAGGT+TGG | - | chr3.3:78592649-78592668 | None:intergenic | 40.0% |
| ! | GACCAACAACTTTTTAACGG+CGG | + | chr3.3:78593150-78593169 | MS.gene31055:CDS | 40.0% |
| !! | AGAGAGTTTGGGACAAGTTT+TGG | - | chr3.3:78592040-78592059 | None:intergenic | 40.0% |
| !! | CTTCGTTGACTTATCGAATG+AGG | + | chr3.3:78592308-78592327 | MS.gene31055:intron | 40.0% |
| !! | TGTTGTGTTGTTTAGCTTGG+AGG | + | chr3.3:78592622-78592641 | MS.gene31055:intron | 40.0% |
| AAACCTCTCACCGGATCAAA+TGG | + | chr3.3:78593264-78593283 | MS.gene31055:CDS | 45.0% | |
| ACCCGCCGTTAAAAAGTTGT+TGG | - | chr3.3:78593155-78593174 | None:intergenic | 45.0% | |
| AGCAATCGTGGAAGAACAAG+CGG | - | chr3.3:78592128-78592147 | None:intergenic | 45.0% | |
| AGGATCAGGGGACAACAATT+TGG | + | chr3.3:78593044-78593063 | MS.gene31055:CDS | 45.0% | |
| ATATCAAAGGAGGCCCGAAT+GGG | + | chr3.3:78592090-78592109 | MS.gene31055:CDS | 45.0% | |
| ATCAGCACATGAGACAACTC+CGG | - | chr3.3:78592497-78592516 | None:intergenic | 45.0% | |
| ATCCTTGCTGGAAAGACCAA+CGG | - | chr3.3:78592767-78592786 | None:intergenic | 45.0% | |
| CAATGTGACCAAATCCTTGC+TGG | - | chr3.3:78592779-78592798 | None:intergenic | 45.0% | |
| CCAAATAGAAACTCTGCTCG+TGG | + | chr3.3:78592424-78592443 | MS.gene31055:CDS | 45.0% | |
| CCACGAGCAGAGTTTCTATT+TGG | - | chr3.3:78592427-78592446 | None:intergenic | 45.0% | |
| CCTGATCTCTCCATTTGATC+CGG | - | chr3.3:78593277-78593296 | None:intergenic | 45.0% | |
| GACACACAATTGGACAAGCA+AGG | + | chr3.3:78592932-78592951 | MS.gene31055:CDS | 45.0% | |
| GAGGCAATCAAATTGCCCAA+AGG | + | chr3.3:78593017-78593036 | MS.gene31055:CDS | 45.0% | |
| TCCACCAACTCAATAGTGAG+TGG | + | chr3.3:78593174-78593193 | MS.gene31055:CDS | 45.0% | |
| TCCCATCTTGATCATAGCAG+CGG | - | chr3.3:78593238-78593257 | None:intergenic | 45.0% | |
| TGAACAGGTGGACACACAAT+TGG | + | chr3.3:78592922-78592941 | MS.gene31055:intron | 45.0% | |
| TGAGGTGAGTGTATTGAGGT+TGG | - | chr3.3:78592734-78592753 | None:intergenic | 45.0% | |
| TGGTCTTTCCAGCAAGGATT+TGG | + | chr3.3:78592768-78592787 | MS.gene31055:CDS | 45.0% | |
| ! | GAAGACCCTTGTTCTGAACA+AGG | - | chr3.3:78593122-78593141 | None:intergenic | 45.0% |
| !! | ACCACTCACTATTGAGTTGG+TGG | - | chr3.3:78593178-78593197 | None:intergenic | 45.0% |
| !! | TCAAATTGCCCAAAGGCATC+AGG | + | chr3.3:78593024-78593043 | MS.gene31055:CDS | 45.0% |
| AATCGTGGAAGAACAAGCGG+AGG | - | chr3.3:78592125-78592144 | None:intergenic | 50.0% | |
| ACCAACGGCGCTAAACATTG+AGG | - | chr3.3:78592752-78592771 | None:intergenic | 50.0% | |
| ACCTCAATGTTTAGCGCCGT+TGG | + | chr3.3:78592748-78592767 | MS.gene31055:CDS | 50.0% | |
| CATAGCAGCGGCAAAATCAG+AGG | - | chr3.3:78593226-78593245 | None:intergenic | 50.0% | |
| CATATCAAAGGAGGCCCGAA+TGG | + | chr3.3:78592089-78592108 | MS.gene31055:CDS | 50.0% | |
| CATTCGGGCCTCCTTTGATA+TGG | - | chr3.3:78592091-78592110 | None:intergenic | 50.0% | |
| CCGGATCAAATGGAGAGATC+AGG | + | chr3.3:78593274-78593293 | MS.gene31055:CDS | 50.0% | |
| GCCGCTGCTATGATCAAGAT+GGG | + | chr3.3:78593234-78593253 | MS.gene31055:CDS | 50.0% | |
| GTAGGGGTCTGAAGATCAAG+AGG | - | chr3.3:78593072-78593091 | None:intergenic | 50.0% | |
| TCAGCACATGAGACAACTCC+GGG | - | chr3.3:78592496-78592515 | None:intergenic | 50.0% | |
| TCTCCATTTGATCCGGTGAG+AGG | - | chr3.3:78593270-78593289 | None:intergenic | 50.0% | |
| TGCCGCTGCTATGATCAAGA+TGG | + | chr3.3:78593233-78593252 | MS.gene31055:CDS | 50.0% | |
| ! | ATGCTGCATTTGCTAGCACG+AGG | + | chr3.3:78592998-78593017 | MS.gene31055:CDS | 50.0% |
| !! | GAGGATAGAAGCACCCATTC+GGG | - | chr3.3:78592106-78592125 | None:intergenic | 50.0% |
| !! | GGAGGATAGAAGCACCCATT+CGG | - | chr3.3:78592107-78592126 | None:intergenic | 50.0% |
| !! | TGAGGTTGGAAGTTGGTGCT+GGG | - | chr3.3:78592720-78592739 | None:intergenic | 50.0% |
| !! | TTGAGGTTGGAAGTTGGTGC+TGG | - | chr3.3:78592721-78592740 | None:intergenic | 50.0% |
| !! | TTTAGCTTGGAGGTCCAACC+TGG | + | chr3.3:78592632-78592651 | MS.gene31055:intron | 50.0% |
| AGTCTGCGGCAGCAATAGCA+AGG | - | chr3.3:78592522-78592541 | None:intergenic | 55.0% | |
| CAGCACATGAGACAACTCCG+GGG | - | chr3.3:78592495-78592514 | None:intergenic | 55.0% | |
| CCCCTGATCCTGATGCCTTT+GGG | - | chr3.3:78593035-78593054 | None:intergenic | 55.0% | |
| TCCCCTGATCCTGATGCCTT+TGG | - | chr3.3:78593036-78593055 | None:intergenic | 55.0% | |
| TCCGGGGCATACGTTCTCTA+CGG | - | chr3.3:78592479-78592498 | None:intergenic | 55.0% | |
| TGGGATGGCAGTGTTAGCAG+CGG | - | chr3.3:78592701-78592720 | None:intergenic | 55.0% | |
| !! | CCCAAAGGCATCAGGATCAG+GGG | + | chr3.3:78593032-78593051 | MS.gene31055:CDS | 55.0% |
| !! | GCCCAAAGGCATCAGGATCA+GGG | + | chr3.3:78593031-78593050 | MS.gene31055:CDS | 55.0% |
| !! | GTTGGAAGTTGGTGCTGGGA+TGG | - | chr3.3:78592716-78592735 | None:intergenic | 55.0% |
| !! | TGCCCAAAGGCATCAGGATC+AGG | + | chr3.3:78593030-78593049 | MS.gene31055:CDS | 55.0% |
| GCCGTAGAGAACGTATGCCC+CGG | + | chr3.3:78592475-78592494 | MS.gene31055:CDS | 60.0% | |
| !! | CGCCGTTGGTCTTTCCAGCA+AGG | + | chr3.3:78592762-78592781 | MS.gene31055:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 78591937 | 78593320 | 78591937 | ID=MS.gene31055 |
| chr3.3 | mRNA | 78591937 | 78593320 | 78591937 | ID=MS.gene31055.t1;Parent=MS.gene31055 |
| chr3.3 | exon | 78591937 | 78592155 | 78591937 | ID=MS.gene31055.t1.exon1;Parent=MS.gene31055.t1 |
| chr3.3 | CDS | 78591937 | 78592155 | 78591937 | ID=cds.MS.gene31055.t1;Parent=MS.gene31055.t1 |
| chr3.3 | exon | 78592361 | 78592552 | 78592361 | ID=MS.gene31055.t1.exon2;Parent=MS.gene31055.t1 |
| chr3.3 | CDS | 78592361 | 78592552 | 78592361 | ID=cds.MS.gene31055.t1;Parent=MS.gene31055.t1 |
| chr3.3 | exon | 78592637 | 78592802 | 78592637 | ID=MS.gene31055.t1.exon3;Parent=MS.gene31055.t1 |
| chr3.3 | CDS | 78592637 | 78592802 | 78592637 | ID=cds.MS.gene31055.t1;Parent=MS.gene31055.t1 |
| chr3.3 | exon | 78592929 | 78593320 | 78592929 | ID=MS.gene31055.t1.exon4;Parent=MS.gene31055.t1 |
| chr3.3 | CDS | 78592929 | 78593320 | 78592929 | ID=cds.MS.gene31055.t1;Parent=MS.gene31055.t1 |
| Gene Sequence |
| Protein sequence |
