Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31944.t1 | XP_013457056.1 | 97.1 | 453 | 11 | 1 | 1 | 453 | 1 | 451 | 1.00E-250 | 875.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31944.t1 | Q680U9 | 74.3 | 452 | 114 | 1 | 1 | 452 | 1 | 450 | 7.1e-200 | 698.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31944.t1 | G7ZZ96 | 97.1 | 453 | 11 | 1 | 1 | 453 | 1 | 451 | 7.4e-251 | 875.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051744 | MS.gene31944 | 0.812816 | 3.50E-51 | -1.69E-46 |
| MS.gene052488 | MS.gene31944 | 0.89138 | 4.19E-74 | -1.69E-46 |
| MS.gene054576 | MS.gene31944 | 0.815093 | 1.10E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene31944 | 0.832295 | 1.03E-55 | -1.69E-46 |
| MS.gene056173 | MS.gene31944 | 0.805019 | 1.63E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene31944 | 0.810595 | 1.07E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31944 | MS.gene038754 | PPI |
| MS.gene032967 | MS.gene31944 | PPI |
| MS.gene31944 | MS.gene76435 | PPI |
| MS.gene31944 | MS.gene044565 | PPI |
| MS.gene31944 | MS.gene80729 | PPI |
| MS.gene31944 | MS.gene89597 | PPI |
| MS.gene31944 | MS.gene012032 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31944.t1 | MTR_3g072660 | 97.130 | 453 | 12 | 1 | 1 | 453 | 1 | 452 | 0.0 | 909 |
| MS.gene31944.t1 | MTR_4g088935 | 97.130 | 453 | 11 | 1 | 1 | 453 | 1 | 451 | 0.0 | 908 |
| MS.gene31944.t1 | MTR_3g072660 | 95.585 | 453 | 12 | 2 | 1 | 453 | 1 | 445 | 0.0 | 887 |
| MS.gene31944.t1 | MTR_3g072660 | 96.623 | 385 | 12 | 1 | 1 | 385 | 1 | 384 | 0.0 | 763 |
| MS.gene31944.t1 | MTR_3g072660 | 94.805 | 385 | 12 | 2 | 1 | 385 | 1 | 377 | 0.0 | 742 |
| MS.gene31944.t1 | MTR_3g072660 | 96.648 | 358 | 11 | 1 | 1 | 358 | 1 | 357 | 0.0 | 708 |
| MS.gene31944.t1 | MTR_3g072660 | 99.083 | 327 | 3 | 0 | 127 | 453 | 1 | 327 | 0.0 | 675 |
| MS.gene31944.t1 | MTR_3g072660 | 96.942 | 327 | 3 | 1 | 127 | 453 | 1 | 320 | 0.0 | 654 |
| MS.gene31944.t1 | MTR_3g072660 | 96.309 | 298 | 10 | 1 | 1 | 298 | 1 | 297 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31944.t1 | AT4G17020 | 74.336 | 452 | 114 | 1 | 1 | 452 | 1 | 450 | 0.0 | 723 |
| MS.gene31944.t1 | AT4G17020 | 74.336 | 452 | 114 | 1 | 1 | 452 | 1 | 450 | 0.0 | 722 |
| MS.gene31944.t1 | AT4G17020 | 74.336 | 452 | 114 | 1 | 1 | 452 | 1 | 450 | 0.0 | 720 |
Find 89 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCACTTTCAGTTAATTT+TGG | 0.182729 | 4.1:-20862011 | None:intergenic |
| GAGAATGGAATGGTTTATTA+TGG | 0.208075 | 4.1:+20866015 | MS.gene31944:CDS |
| TGTAGCTTTCTTACTACTTT+TGG | 0.229854 | 4.1:-20866109 | None:intergenic |
| ACCTGTGCCGGCTAAATTAT+TGG | 0.265931 | 4.1:+20860444 | MS.gene31944:CDS |
| ATTTCAGAGGAACATAATTA+AGG | 0.312303 | 4.1:+20862514 | MS.gene31944:CDS |
| CTCCTTTCTTGATGATGATT+CGG | 0.327686 | 4.1:-20862764 | None:intergenic |
| CAATGTTGCCATTGATAGAT+TGG | 0.332658 | 4.1:+20860501 | MS.gene31944:CDS |
| GATCATTGCCAAGAATTTCA+TGG | 0.333040 | 4.1:+20859958 | MS.gene31944:CDS |
| CACCATGTCCATGAAATTCT+TGG | 0.335342 | 4.1:-20859966 | None:intergenic |
| GGCTAAATTATTGGCGGAAT+GGG | 0.342205 | 4.1:+20860453 | MS.gene31944:CDS |
| CACAGCTTTGGTACATCATC+AGG | 0.346440 | 4.1:+20862143 | MS.gene31944:CDS |
| CAACTTCCAAATCTTATTGT+TGG | 0.350456 | 4.1:+20865064 | MS.gene31944:CDS |
| AATTATGTTCCTCTGAAATT+CGG | 0.351671 | 4.1:-20862510 | None:intergenic |
| ATAGCTCCAACAATAAGATT+TGG | 0.356315 | 4.1:-20865070 | None:intergenic |
| GTAGAGTTTATCGAGTTTGA+TGG | 0.382908 | 4.1:-20860002 | None:intergenic |
| TGTGAGGCTCCCAACATTAG+AGG | 0.387289 | 4.1:+20861540 | MS.gene31944:CDS |
| TTACAGTTATTGCATATTGA+TGG | 0.396001 | 4.1:+20860421 | MS.gene31944:CDS |
| AGAATGGAATGGTTTATTAT+GGG | 0.397970 | 4.1:+20866016 | MS.gene31944:CDS |
| TGCAGATAGTCAGTTTCTTT+CGG | 0.401425 | 4.1:+20865663 | MS.gene31944:intron |
| TGGGCTGGTCAAACTTCAAC+AGG | 0.402831 | 4.1:+20862550 | MS.gene31944:CDS |
| CAAAGAAGAGCTTATGTTGA+AGG | 0.407543 | 4.1:-20861821 | None:intergenic |
| TTGTGCTTTGATAGTCCATC+TGG | 0.412236 | 4.1:-20860481 | None:intergenic |
| GCTCCAAAATTAACTGAAAG+TGG | 0.432592 | 4.1:+20862008 | MS.gene31944:CDS |
| AAATCAAAATGCCTGAGGTT+AGG | 0.443637 | 4.1:+20859936 | None:intergenic |
| TAATAAACCATTCCATTCTC+TGG | 0.444435 | 4.1:-20866012 | None:intergenic |
| GCCTGAAAATGTCACAGATC+AGG | 0.448319 | 4.1:+20865727 | MS.gene31944:CDS |
| GCCAATAATTTAGCCGGCAC+AGG | 0.449508 | 4.1:-20860445 | None:intergenic |
| CGGCTAAATTATTGGCGGAA+TGG | 0.450685 | 4.1:+20860452 | MS.gene31944:CDS |
| TTAAGGACCTTGCAGACCTT+GGG | 0.454174 | 4.1:+20862531 | MS.gene31944:CDS |
| ATTAAGGACCTTGCAGACCT+TGG | 0.455377 | 4.1:+20862530 | MS.gene31944:CDS |
| AGATTCAAAGAAGATGCATT+TGG | 0.456242 | 4.1:+20866040 | MS.gene31944:CDS |
| GACTTATGCTCTGGAACAAT+GGG | 0.456255 | 4.1:+20861570 | MS.gene31944:CDS |
| CGTGTGACTGCGCCAGAGAA+TGG | 0.459544 | 4.1:+20866000 | MS.gene31944:CDS |
| AAGGTCTTGTCAACATGACT+TGG | 0.470934 | 4.1:-20861802 | None:intergenic |
| GTCTCAAGATCCTCTAATGT+TGG | 0.472624 | 4.1:-20861550 | None:intergenic |
| TTGAAGCTCTTGACAATGAC+AGG | 0.474245 | 4.1:+20860542 | MS.gene31944:CDS |
| AGCCTCACAGTAATATTAGA+AGG | 0.477881 | 4.1:-20861526 | None:intergenic |
| TCAAAGTTGCTTACCCTGGA+TGG | 0.478380 | 4.1:-20865891 | None:intergenic |
| TCTCAAGATCCTCTAATGTT+GGG | 0.478745 | 4.1:-20861549 | None:intergenic |
| TATAGGGCAGGAAAGAAAGT+TGG | 0.482264 | 4.1:+20862698 | MS.gene31944:intron |
| CATTCCGCCAATAATTTAGC+CGG | 0.493364 | 4.1:-20860451 | None:intergenic |
| AGACTTATGCTCTGGAACAA+TGG | 0.494366 | 4.1:+20861569 | MS.gene31944:CDS |
| TCTCCTTCTTGCAGGAAGAT+CGG | 0.500349 | 4.1:+20861087 | MS.gene31944:intron |
| TGGATACAAATGCACAGCTT+TGG | 0.501549 | 4.1:+20862131 | MS.gene31944:CDS |
| ATAAACAGAACCTCTGACTC+AGG | 0.514589 | 4.1:-20861867 | None:intergenic |
| CAATTGAACCAATCTATCAA+TGG | 0.514654 | 4.1:-20860509 | None:intergenic |
| TCATCTGCGAAGCTATTCTC+AGG | 0.530426 | 4.1:+20860035 | MS.gene31944:CDS |
| TGCCAAGAATTTCATGGACA+TGG | 0.531687 | 4.1:+20859964 | MS.gene31944:CDS |
| GGATCTTGAGACTTATGCTC+TGG | 0.535259 | 4.1:+20861561 | MS.gene31944:CDS |
| GTGGTGACAGATTAGGTTGT+GGG | 0.535695 | 4.1:+20865815 | MS.gene31944:intron |
| GGACCTTGCAGACCTTGGGC+TGG | 0.536902 | 4.1:+20862535 | MS.gene31944:CDS |
| GTGTGGCAGGATGTATTTGA+AGG | 0.539271 | 4.1:+20865975 | MS.gene31944:intron |
| TCTGACTCAGGAGACGCCGC+TGG | 0.540398 | 4.1:-20861855 | None:intergenic |
| AGGTCTTGTCAACATGACTT+GGG | 0.546852 | 4.1:-20861801 | None:intergenic |
| GACCGAATCATCATCAAGAA+AGG | 0.546881 | 4.1:+20862762 | MS.gene31944:CDS |
| CAATGGCATTACAGCAGACC+AGG | 0.547595 | 4.1:+20865123 | MS.gene31944:CDS |
| ATTATGACGAGTTCCCATCC+AGG | 0.551997 | 4.1:+20865877 | MS.gene31944:CDS |
| AACACATATTTCTTTGCAAG+AGG | 0.556398 | 4.1:-20860400 | None:intergenic |
| CAGGAGAGAGGTGTTGATGC+AGG | 0.559845 | 4.1:+20862264 | MS.gene31944:intron |
| TGACTTGATATCATTCATGC+TGG | 0.561348 | 4.1:+20862287 | MS.gene31944:CDS |
| GCGGAATGGGTGCTTCCAGA+TGG | 0.565096 | 4.1:+20860466 | MS.gene31944:CDS |
| AATTACACTGTGAGATATTG+CGG | 0.567848 | 4.1:+20864158 | MS.gene31944:CDS |
| CAAAGTTGCTTACCCTGGAT+GGG | 0.570298 | 4.1:-20865890 | None:intergenic |
| TTAGAAGGCATTGATTCCCT+CGG | 0.574898 | 4.1:-20861511 | None:intergenic |
| TCATCCTCGTGTTGCACAGA+GGG | 0.581937 | 4.1:+20865694 | MS.gene31944:CDS |
| AGTTTATCGAGTTTGATGGC+AGG | 0.583098 | 4.1:-20859998 | None:intergenic |
| TTGGCAATGATCCTAACCTC+AGG | 0.587350 | 4.1:-20859947 | None:intergenic |
| GGTGGTGACAGATTAGGTTG+TGG | 0.588257 | 4.1:+20865814 | MS.gene31944:intron |
| GCATATTGATGGACCTGTGC+CGG | 0.588398 | 4.1:+20860432 | MS.gene31944:CDS |
| AGCGGCGTCTCCTGAGTCAG+AGG | 0.589108 | 4.1:+20861857 | MS.gene31944:CDS |
| GCATTTGGTCGTCAAGTCTG+AGG | 0.592805 | 4.1:+20866055 | MS.gene31944:CDS |
| GTTGAAGTTTGACCAGCCCA+AGG | 0.597505 | 4.1:-20862547 | None:intergenic |
| CAAGAATTTCATGGACATGG+TGG | 0.599325 | 4.1:+20859967 | MS.gene31944:CDS |
| TTATGACGAGTTCCCATCCA+GGG | 0.606538 | 4.1:+20865878 | MS.gene31944:CDS |
| TGACCAGCCCAAGGTCTGCA+AGG | 0.612502 | 4.1:-20862538 | None:intergenic |
| CGAATCATCATCAAGAAAGG+AGG | 0.616443 | 4.1:+20862765 | MS.gene31944:CDS |
| ACATATTTCTTTGCAAGAGG+CGG | 0.617514 | 4.1:-20860397 | None:intergenic |
| ACACATTGACCGAATTTCAG+AGG | 0.620159 | 4.1:+20862501 | MS.gene31944:CDS |
| TGTGCCGGCTAAATTATTGG+CGG | 0.623227 | 4.1:+20860447 | MS.gene31944:CDS |
| TTATGCTCTGGAACAATGGG+AGG | 0.625310 | 4.1:+20861573 | MS.gene31944:CDS |
| GGAATATATCACTAATTCTG+AGG | 0.632294 | 4.1:+20862165 | MS.gene31944:CDS |
| TGGCAGTGGAACTTTGCCGA+GGG | 0.654665 | 4.1:+20861495 | MS.gene31944:intron |
| ATGGCAGTGGAACTTTGCCG+AGG | 0.657791 | 4.1:+20861494 | MS.gene31944:intron |
| ACAGCTTTGGTACATCATCA+GGG | 0.675051 | 4.1:+20862144 | MS.gene31944:CDS |
| AAACGAAATCAAAATGCCTG+AGG | 0.679998 | 4.1:+20859931 | None:intergenic |
| CTCATCCTCGTGTTGCACAG+AGG | 0.680297 | 4.1:+20865693 | MS.gene31944:CDS |
| GGTACCCTCTGTGCAACACG+AGG | 0.694512 | 4.1:-20865698 | None:intergenic |
| TGCCTTCTAATATTACTGTG+AGG | 0.698083 | 4.1:+20861524 | MS.gene31944:CDS |
| GACTGCGCCAGAGAATGGAA+TGG | 0.724470 | 4.1:+20866005 | MS.gene31944:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAATTTATTACATTAG+CGG | + | chr4.1:20863380-20863399 | MS.gene31944:intron | 10.0% |
| !! | AGATAAAAAGTAATAAAATA+TGG | - | chr4.1:20864479-20864498 | None:intergenic | 10.0% |
| !!! | TTTATTTTATGAAAATAGAA+GGG | - | chr4.1:20864775-20864794 | None:intergenic | 10.0% |
| !! | AAAAAGAAAGAAGAAATATA+AGG | - | chr4.1:20863573-20863592 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr4.1:20864700-20864719 | MS.gene31944:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr4.1:20864719-20864700 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr4.1:20864701-20864720 | MS.gene31944:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr4.1:20864720-20864701 | None:intergenic | 15.0% |
| !! | TATAAGTACAAGATAAATTA+AGG | - | chr4.1:20864900-20864919 | None:intergenic | 15.0% |
| !! | TTAAGTTAAAAACATCATTA+AGG | + | chr4.1:20865541-20865560 | MS.gene31944:intron | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr4.1:20864610-20864629 | MS.gene31944:intron | 15.0% |
| !!! | CATTCTATTTAATTTTTTCA+GGG | + | chr4.1:20864085-20864104 | MS.gene31944:intron | 15.0% |
| !!! | GTTTATTTTATGAAAATAGA+AGG | - | chr4.1:20864776-20864795 | None:intergenic | 15.0% |
| !!! | TATTTTGCTTTTTTAAATTG+TGG | + | chr4.1:20865170-20865189 | MS.gene31944:intron | 15.0% |
| !!! | TCATTCTATTTAATTTTTTC+AGG | + | chr4.1:20864084-20864103 | MS.gene31944:intron | 15.0% |
| !! | AAAACAAATCAATTGTGAAA+CGG | - | chr4.1:20862799-20862818 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | chr4.1:20864349-20864368 | None:intergenic | 20.0% |
| !! | AATAAGATGAAAACAACTTA+TGG | + | chr4.1:20860197-20860216 | MS.gene31944:intron | 20.0% |
| !! | ACTGCTAATGTAAAAAATAT+AGG | - | chr4.1:20863415-20863434 | None:intergenic | 20.0% |
| !! | AGAAAAAAAATACTAAACTG+GGG | - | chr4.1:20861070-20861089 | None:intergenic | 20.0% |
| !! | AGCAAAGAAAAAAAAAAGAA+TGG | - | chr4.1:20863080-20863099 | None:intergenic | 20.0% |
| !! | ATTAAATTGCAGTTACAAAA+GGG | - | chr4.1:20862429-20862448 | None:intergenic | 20.0% |
| !! | CTTACAAATCATAAAATGAT+AGG | + | chr4.1:20860368-20860387 | MS.gene31944:intron | 20.0% |
| !! | GAATAATATGCATAATCAAA+AGG | - | chr4.1:20860965-20860984 | None:intergenic | 20.0% |
| !! | GAGAAAAAAAATACTAAACT+GGG | - | chr4.1:20861071-20861090 | None:intergenic | 20.0% |
| !! | GCAAAGAAAAAAAAAAGAAT+GGG | - | chr4.1:20863079-20863098 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr4.1:20864350-20864369 | None:intergenic | 20.0% |
| !! | TATAATTTCTAATACTTACC+TGG | - | chr4.1:20865144-20865163 | None:intergenic | 20.0% |
| !! | TATATTATATGCCTAATCAT+TGG | - | chr4.1:20862480-20862499 | None:intergenic | 20.0% |
| !! | TGATAGAAATAGCTTAATTA+AGG | - | chr4.1:20860109-20860128 | None:intergenic | 20.0% |
| !! | TTCACCAAAATATTATTGTT+TGG | + | chr4.1:20864962-20864981 | MS.gene31944:intron | 20.0% |
| !!! | AAAAAGTTCTAAAACAAGAT+TGG | - | chr4.1:20863254-20863273 | None:intergenic | 20.0% |
| !!! | AAGACCAAACAATAATATTT+TGG | - | chr4.1:20864969-20864988 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | - | chr4.1:20864444-20864463 | None:intergenic | 20.0% |
| !!! | AATTTTGTTCATGTGTATAT+AGG | + | chr4.1:20863656-20863675 | MS.gene31944:intron | 20.0% |
| !!! | ACAGCATTTTTATAATTTCA+TGG | - | chr4.1:20861344-20861363 | None:intergenic | 20.0% |
| !!! | ACTTTAAGAAAATTCAAGAA+CGG | - | chr4.1:20860898-20860917 | None:intergenic | 20.0% |
| !!! | CAATAATATTTTGGTGAAAT+AGG | - | chr4.1:20864960-20864979 | None:intergenic | 20.0% |
| !!! | CTTTTTTTCACAACTTTATA+GGG | + | chr4.1:20862682-20862701 | MS.gene31944:intron | 20.0% |
| !!! | GAATTTTCTTAAAGTTTATG+AGG | + | chr4.1:20860903-20860922 | MS.gene31944:intron | 20.0% |
| !!! | TAATCTTTTTTGTTAGTAGA+TGG | + | chr4.1:20863207-20863226 | MS.gene31944:intron | 20.0% |
| !!! | TCTTTTTTTCACAACTTTAT+AGG | + | chr4.1:20862681-20862700 | MS.gene31944:intron | 20.0% |
| !!! | TGAAGATTTTATTCAAATGA+AGG | - | chr4.1:20865349-20865368 | None:intergenic | 20.0% |
| !!! | TTCATATGAATTTTGAATTC+AGG | - | chr4.1:20861379-20861398 | None:intergenic | 20.0% |
| !!! | TTTTCTGATATGTAGTATTA+TGG | + | chr4.1:20865793-20865812 | MS.gene31944:intron | 20.0% |
| !!! | TTTTGAGACAAATCATATAA+TGG | + | chr4.1:20860294-20860313 | MS.gene31944:intron | 20.0% |
| ! | AAAAGTGGAATCAAAAGAAA+AGG | - | chr4.1:20861606-20861625 | None:intergenic | 25.0% |
| ! | AACAAACCTATATAGACAAT+GGG | + | chr4.1:20861310-20861329 | MS.gene31944:intron | 25.0% |
| ! | AATATCTAATAGTGAGTAGT+TGG | + | chr4.1:20865021-20865040 | MS.gene31944:intron | 25.0% |
| ! | AGAATGGAATGGTTTATTAT+GGG | + | chr4.1:20866016-20866035 | MS.gene31944:CDS | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | - | chr4.1:20864316-20864335 | None:intergenic | 25.0% |
| ! | ATAAAATCGTTAATACGAGT+GGG | + | chr4.1:20861252-20861271 | MS.gene31944:intron | 25.0% |
| ! | ATCATGTCATCAAAATGAAA+AGG | + | chr4.1:20863603-20863622 | MS.gene31944:intron | 25.0% |
| ! | ATGTACCTTAATAGAAACAA+GGG | - | chr4.1:20861234-20861253 | None:intergenic | 25.0% |
| ! | ATTTCAGAGGAACATAATTA+AGG | + | chr4.1:20862514-20862533 | MS.gene31944:CDS | 25.0% |
| ! | CATTAAATTGCAGTTACAAA+AGG | - | chr4.1:20862430-20862449 | None:intergenic | 25.0% |
| ! | CATTTGAATAAAATCTTCAC+TGG | + | chr4.1:20865350-20865369 | MS.gene31944:intron | 25.0% |
| ! | GAATTTCTATGTTTCTTTGT+TGG | - | chr4.1:20865502-20865521 | None:intergenic | 25.0% |
| ! | GATAATTCTACACATATAAG+TGG | - | chr4.1:20860851-20860870 | None:intergenic | 25.0% |
| ! | GGAGAAAAAAAATACTAAAC+TGG | - | chr4.1:20861072-20861091 | None:intergenic | 25.0% |
| ! | TAACAAACCTATATAGACAA+TGG | + | chr4.1:20861309-20861328 | MS.gene31944:intron | 25.0% |
| ! | TATGTACCTTAATAGAAACA+AGG | - | chr4.1:20861235-20861254 | None:intergenic | 25.0% |
| ! | TGTAGAAAACTAATGTTTGT+CGG | + | chr4.1:20863860-20863879 | MS.gene31944:intron | 25.0% |
| ! | TGTTAGTAGATGGATAAAAA+AGG | + | chr4.1:20863217-20863236 | MS.gene31944:intron | 25.0% |
| ! | TTACAGTTATTGCATATTGA+TGG | + | chr4.1:20860421-20860440 | MS.gene31944:CDS | 25.0% |
| ! | TTTAATAGAAAGTTTAGACG+TGG | + | chr4.1:20862822-20862841 | MS.gene31944:intron | 25.0% |
| !! | AAACCACTTTCAGTTAATTT+TGG | - | chr4.1:20862014-20862033 | None:intergenic | 25.0% |
| !! | AAGCTTTATAGCTGAATTAA+TGG | - | chr4.1:20864930-20864949 | None:intergenic | 25.0% |
| !! | ACTTGTATGTCTAAATCTTT+TGG | + | chr4.1:20865438-20865457 | MS.gene31944:intron | 25.0% |
| !! | ATATGGTTTAGATGATCTTT+TGG | + | chr4.1:20863696-20863715 | MS.gene31944:intron | 25.0% |
| !! | CTGCTACTTATAAGTTATAA+AGG | - | chr4.1:20865281-20865300 | None:intergenic | 25.0% |
| !! | GCAATGATGTATTCTATTTT+GGG | + | chr4.1:20864213-20864232 | MS.gene31944:intron | 25.0% |
| !! | TAAGGTGTTTAATGAAAACA+TGG | - | chr4.1:20860091-20860110 | None:intergenic | 25.0% |
| !! | TATGGTTTAGATGATCTTTT+GGG | + | chr4.1:20863697-20863716 | MS.gene31944:intron | 25.0% |
| !! | TGCAATGATGTATTCTATTT+TGG | + | chr4.1:20864212-20864231 | MS.gene31944:intron | 25.0% |
| !! | TTCAAATTTGACTTCTGTAA+AGG | + | chr4.1:20865252-20865271 | MS.gene31944:intron | 25.0% |
| !! | TTCAGAAACTTTTAGTACAT+GGG | + | chr4.1:20861148-20861167 | MS.gene31944:CDS | 25.0% |
| !! | TTGTATAATGCTTTTGACAA+TGG | + | chr4.1:20865106-20865125 | MS.gene31944:CDS | 25.0% |
| !! | TTGTCTTCTTTTTCTTTTCA+TGG | + | chr4.1:20861187-20861206 | MS.gene31944:intron | 25.0% |
| !!! | AAACTGGAAGTTGTTTTTTA+TGG | + | chr4.1:20864856-20864875 | MS.gene31944:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr4.1:20864639-20864658 | MS.gene31944:intron | 25.0% |
| !!! | AATTATGTTCCTCTGAAATT+CGG | - | chr4.1:20862513-20862532 | None:intergenic | 25.0% |
| !!! | AGATTTGTTGCTAATTTTGT+TGG | - | chr4.1:20862730-20862749 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr4.1:20864638-20864657 | MS.gene31944:intron | 25.0% |
| !!! | TATTCACTTTTCTCCTATTA+AGG | + | chr4.1:20860065-20860084 | MS.gene31944:intron | 25.0% |
| !!! | TTTTTTTCCTTCCAATGATT+AGG | + | chr4.1:20862466-20862485 | MS.gene31944:intron | 25.0% |
| AACACATATTTCTTTGCAAG+AGG | - | chr4.1:20860403-20860422 | None:intergenic | 30.0% | |
| AATCAAAAAAGCCATAACAG+GGG | - | chr4.1:20865942-20865961 | None:intergenic | 30.0% | |
| AATTACACTGTGAGATATTG+CGG | + | chr4.1:20864158-20864177 | MS.gene31944:CDS | 30.0% | |
| AGATGCAGAATGATTTAACT+TGG | + | chr4.1:20862618-20862637 | MS.gene31944:intron | 30.0% | |
| AGATTCAAAGAAGATGCATT+TGG | + | chr4.1:20866040-20866059 | MS.gene31944:CDS | 30.0% | |
| ATAACATGTCAATCGTTCAT+TGG | + | chr4.1:20863957-20863976 | MS.gene31944:intron | 30.0% | |
| ATAGAGACAGATAACTGTTA+CGG | - | chr4.1:20862194-20862213 | None:intergenic | 30.0% | |
| ATAGCTCCAACAATAAGATT+TGG | - | chr4.1:20865073-20865092 | None:intergenic | 30.0% | |
| ATATGTATGGAAGTTTCTGT+TGG | + | chr4.1:20863795-20863814 | MS.gene31944:intron | 30.0% | |
| ATTTATTACATTAGCGGTGT+TGG | + | chr4.1:20863386-20863405 | MS.gene31944:intron | 30.0% | |
| ATTTGATGCATACCAAAAAC+TGG | - | chr4.1:20862037-20862056 | None:intergenic | 30.0% | |
| CAACTTCCAAATCTTATTGT+TGG | + | chr4.1:20865064-20865083 | MS.gene31944:CDS | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr4.1:20864576-20864595 | None:intergenic | 30.0% | |
| CAATTGAACCAATCTATCAA+TGG | - | chr4.1:20860512-20860531 | None:intergenic | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | - | chr4.1:20864317-20864336 | None:intergenic | 30.0% | |
| CATAAAATCGTTAATACGAG+TGG | + | chr4.1:20861251-20861270 | MS.gene31944:intron | 30.0% | |
| CTACTTAAGTAAGTACTTGT+GGG | - | chr4.1:20860240-20860259 | None:intergenic | 30.0% | |
| CTTTACTATCTTTCTACCTT+AGG | + | chr4.1:20865465-20865484 | MS.gene31944:intron | 30.0% | |
| GAATCAAAAAAGCCATAACA+GGG | - | chr4.1:20865943-20865962 | None:intergenic | 30.0% | |
| GAGAATGGAATGGTTTATTA+TGG | + | chr4.1:20866015-20866034 | MS.gene31944:CDS | 30.0% | |
| GGAATATATCACTAATTCTG+AGG | + | chr4.1:20862165-20862184 | MS.gene31944:CDS | 30.0% | |
| GTTGGAAAAATGATAACCTA+AGG | - | chr4.1:20865484-20865503 | None:intergenic | 30.0% | |
| TAAAATCTTCACTGGTGAAT+TGG | + | chr4.1:20865358-20865377 | MS.gene31944:intron | 30.0% | |
| TAATAAACCATTCCATTCTC+TGG | - | chr4.1:20866015-20866034 | None:intergenic | 30.0% | |
| TCATTGCAGAAAATATTTCG+CGG | - | chr4.1:20864200-20864219 | None:intergenic | 30.0% | |
| TCTACTTAAGTAAGTACTTG+TGG | - | chr4.1:20860241-20860260 | None:intergenic | 30.0% | |
| TCTGATATGTAGTATTATGG+TGG | + | chr4.1:20865796-20865815 | MS.gene31944:intron | 30.0% | |
| TCTTAAAGTTTATGAGGAAC+AGG | + | chr4.1:20860909-20860928 | MS.gene31944:intron | 30.0% | |
| TGCATTACATTAAGTTCAAG+TGG | - | chr4.1:20862070-20862089 | None:intergenic | 30.0% | |
| TGTACAGAGTAAACAAAAAG+TGG | - | chr4.1:20861621-20861640 | None:intergenic | 30.0% | |
| TTAGACATACAAGTATATCG+TGG | - | chr4.1:20865432-20865451 | None:intergenic | 30.0% | |
| TTATATGCCTAATCATTGGA+AGG | - | chr4.1:20862476-20862495 | None:intergenic | 30.0% | |
| TTCAAATGAAGGATTGAAGT+CGG | - | chr4.1:20865338-20865357 | None:intergenic | 30.0% | |
| TTGTTATGAATTACAGCTGA+TGG | + | chr4.1:20862111-20862130 | MS.gene31944:intron | 30.0% | |
| ! | AATCAGTCTGAAGTAGTAAA+AGG | - | chr4.1:20863932-20863951 | None:intergenic | 30.0% |
| ! | AATGAAAACATGGCCTTAAT+AGG | - | chr4.1:20860081-20860100 | None:intergenic | 30.0% |
| ! | ATGGTTTAGATGATCTTTTG+GGG | + | chr4.1:20863698-20863717 | MS.gene31944:intron | 30.0% |
| ! | CTTCAGAAACTTTTAGTACA+TGG | + | chr4.1:20861147-20861166 | MS.gene31944:CDS | 30.0% |
| ! | TCAATTTGAGACTTGATATG+TGG | + | chr4.1:20865309-20865328 | MS.gene31944:intron | 30.0% |
| !! | AGATATTGCGGTTATTTTCA+AGG | + | chr4.1:20864170-20864189 | MS.gene31944:CDS | 30.0% |
| !! | AGCTTAGTTTTCATGTCATT+GGG | + | chr4.1:20862310-20862329 | MS.gene31944:CDS | 30.0% |
| !! | ATGTTCCCTTGTTTCTATTA+AGG | + | chr4.1:20861226-20861245 | MS.gene31944:intron | 30.0% |
| !! | GAAGAGTTTTAGCAAAAATC+AGG | - | chr4.1:20860804-20860823 | None:intergenic | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr4.1:20864732-20864751 | MS.gene31944:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr4.1:20864751-20864732 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr4.1:20864731-20864750 | MS.gene31944:intron | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr4.1:20864750-20864731 | None:intergenic | 30.0% |
| !!! | ATTTTTTTTCTCCTTCTTGC+AGG | + | chr4.1:20861079-20861098 | MS.gene31944:intron | 30.0% |
| !!! | CTTGTTTTATTTGTTGCATG+TGG | + | chr4.1:20860754-20860773 | MS.gene31944:intron | 30.0% |
| AAACCTATATAGACAATGGG+TGG | + | chr4.1:20861313-20861332 | MS.gene31944:intron | 35.0% | |
| AAGCAATGTTGATCAATGAG+GGG | + | chr4.1:20863152-20863171 | MS.gene31944:intron | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr4.1:20864716-20864735 | MS.gene31944:intron | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr4.1:20864735-20864716 | None:intergenic | 35.0% | |
| ACATATTTCTTTGCAAGAGG+CGG | - | chr4.1:20860400-20860419 | None:intergenic | 35.0% | |
| ACTAAACTGGGGTAAAACAA+GGG | - | chr4.1:20861059-20861078 | None:intergenic | 35.0% | |
| ACTTGAATGTTTGCTTTAGC+TGG | + | chr4.1:20861449-20861468 | MS.gene31944:intron | 35.0% | |
| AGCCTCACAGTAATATTAGA+AGG | - | chr4.1:20861529-20861548 | None:intergenic | 35.0% | |
| AGGAAGTTCCAAAACCAAAA+GGG | - | chr4.1:20864826-20864845 | None:intergenic | 35.0% | |
| AGTCAGAGGTTCTGTTTATT+TGG | + | chr4.1:20861871-20861890 | MS.gene31944:intron | 35.0% | |
| AGTTCCTTCAACACATTACA+AGG | - | chr4.1:20860720-20860739 | None:intergenic | 35.0% | |
| AGTTTCTGTTGGACATTATC+AGG | + | chr4.1:20863806-20863825 | MS.gene31944:intron | 35.0% | |
| ATAGAAACAAGGGAACATGA+TGG | - | chr4.1:20861224-20861243 | None:intergenic | 35.0% | |
| ATATGTAGAAGACAGTGAAC+AGG | - | chr4.1:20863550-20863569 | None:intergenic | 35.0% | |
| CAAAAAGTCATTGGAGGTTT+AGG | - | chr4.1:20861747-20861766 | None:intergenic | 35.0% | |
| CAAAGAAGAGCTTATGTTGA+AGG | - | chr4.1:20861824-20861843 | None:intergenic | 35.0% | |
| CAATGTTGCCATTGATAGAT+TGG | + | chr4.1:20860501-20860520 | MS.gene31944:CDS | 35.0% | |
| CAGGATTTGATGTCACAATT+TGG | + | chr4.1:20860928-20860947 | MS.gene31944:intron | 35.0% | |
| CTTCCAGTTTCAATTTCGAT+AGG | - | chr4.1:20864846-20864865 | None:intergenic | 35.0% | |
| CTTCCTATCGAAATTGAAAC+TGG | + | chr4.1:20864840-20864859 | MS.gene31944:intron | 35.0% | |
| GAACATGAGAAAAGACTAGA+GGG | - | chr4.1:20864798-20864817 | None:intergenic | 35.0% | |
| GAAGCAATGTTGATCAATGA+GGG | + | chr4.1:20863151-20863170 | MS.gene31944:intron | 35.0% | |
| GATCATTGCCAAGAATTTCA+TGG | + | chr4.1:20859958-20859977 | MS.gene31944:CDS | 35.0% | |
| GCTCCAAAATTAACTGAAAG+TGG | + | chr4.1:20862008-20862027 | MS.gene31944:CDS | 35.0% | |
| GGAATCAAAAAAGCCATAAC+AGG | - | chr4.1:20865944-20865963 | None:intergenic | 35.0% | |
| GGTTTACCACAAAAAGTCAT+TGG | - | chr4.1:20861756-20861775 | None:intergenic | 35.0% | |
| GTAGAGTTTATCGAGTTTGA+TGG | - | chr4.1:20860005-20860024 | None:intergenic | 35.0% | |
| GTGTTGTATGAGTATCATAC+AGG | - | chr4.1:20863032-20863051 | None:intergenic | 35.0% | |
| TAACCACCCATTGTCTATAT+AGG | - | chr4.1:20861319-20861338 | None:intergenic | 35.0% | |
| TAAGTTGCAACAAGAAACAC+TGG | - | chr4.1:20861777-20861796 | None:intergenic | 35.0% | |
| TACTAAACTGGGGTAAAACA+AGG | - | chr4.1:20861060-20861079 | None:intergenic | 35.0% | |
| TAGAAACAAGGGAACATGAT+GGG | - | chr4.1:20861223-20861242 | None:intergenic | 35.0% | |
| TAGGAAGTTCCAAAACCAAA+AGG | - | chr4.1:20864827-20864846 | None:intergenic | 35.0% | |
| TATGAGTATCATACAGGTGT+CGG | - | chr4.1:20863026-20863045 | None:intergenic | 35.0% | |
| TATGTAGAAGACAGTGAACA+GGG | - | chr4.1:20863549-20863568 | None:intergenic | 35.0% | |
| TCTACGAGATTAAAGATGTG+TGG | + | chr4.1:20863129-20863148 | MS.gene31944:intron | 35.0% | |
| TCTCAAGATCCTCTAATGTT+GGG | - | chr4.1:20861552-20861571 | None:intergenic | 35.0% | |
| TCTGCATGTGATTTCGTTTA+GGG | + | chr4.1:20862852-20862871 | MS.gene31944:intron | 35.0% | |
| TGAACGATTGACATGTTATG+AGG | - | chr4.1:20863956-20863975 | None:intergenic | 35.0% | |
| TGACTTGATATCATTCATGC+TGG | + | chr4.1:20862287-20862306 | MS.gene31944:CDS | 35.0% | |
| TGAGTAGTTGGATATATGCA+GGG | + | chr4.1:20865033-20865052 | MS.gene31944:intron | 35.0% | |
| TGCAGATAGTCAGTTTCTTT+CGG | + | chr4.1:20865663-20865682 | MS.gene31944:intron | 35.0% | |
| TGCCTTCTAATATTACTGTG+AGG | + | chr4.1:20861524-20861543 | MS.gene31944:CDS | 35.0% | |
| TTAACTCGTAATACGCGATA+TGG | - | chr4.1:20861292-20861311 | None:intergenic | 35.0% | |
| TTACCACAAAAAGTCATTGG+AGG | - | chr4.1:20861753-20861772 | None:intergenic | 35.0% | |
| TTCTGCATGTGATTTCGTTT+AGG | + | chr4.1:20862851-20862870 | MS.gene31944:intron | 35.0% | |
| ! | AAACCTCCAATGACTTTTTG+TGG | + | chr4.1:20861747-20861766 | MS.gene31944:intron | 35.0% |
| ! | AGACAATTTAGCCTCTGAAA+TGG | + | chr4.1:20860629-20860648 | MS.gene31944:intron | 35.0% |
| ! | CTGTTTTGCTTGCATATGTA+TGG | + | chr4.1:20863782-20863801 | MS.gene31944:intron | 35.0% |
| ! | CTTTGATGAAAGTTTTCCAG+CGG | + | chr4.1:20861839-20861858 | MS.gene31944:CDS | 35.0% |
| ! | GATTCCTTATGTCATTTGTG+TGG | + | chr4.1:20865958-20865977 | MS.gene31944:intron | 35.0% |
| ! | GTTTTCTACAAGTTGTAGCA+TGG | - | chr4.1:20863850-20863869 | None:intergenic | 35.0% |
| ! | TATTATGGTGGTGACAGATT+AGG | + | chr4.1:20865808-20865827 | MS.gene31944:intron | 35.0% |
| ! | TCAAATGCTAGCCTATACTA+TGG | + | chr4.1:20860673-20860692 | MS.gene31944:intron | 35.0% |
| ! | TGAAAGTGGTTTCCAGTTTT+TGG | + | chr4.1:20862022-20862041 | MS.gene31944:CDS | 35.0% |
| ! | TGGTTTAGATGATCTTTTGG+GGG | + | chr4.1:20863699-20863718 | MS.gene31944:intron | 35.0% |
| ! | TTTTCACAACTTTATAGGGC+AGG | + | chr4.1:20862686-20862705 | MS.gene31944:intron | 35.0% |
| !! | CTCCTTTCTTGATGATGATT+CGG | - | chr4.1:20862767-20862786 | None:intergenic | 35.0% |
| !! | GAGCTTAGTTTTCATGTCAT+TGG | + | chr4.1:20862309-20862328 | MS.gene31944:CDS | 35.0% |
| !! | GCTTAGTTTTCATGTCATTG+GGG | + | chr4.1:20862311-20862330 | MS.gene31944:CDS | 35.0% |
| !! | TATGTTTTGAACATGCTTCG+TGG | + | chr4.1:20860337-20860356 | MS.gene31944:intron | 35.0% |
| !!! | TTTTCAGGGATTTGTTGTTG+TGG | + | chr4.1:20864099-20864118 | MS.gene31944:intron | 35.0% |
| AACTCCTTAGCTATGAAGCA+CGG | + | chr4.1:20862876-20862895 | MS.gene31944:intron | 40.0% | |
| AAGTATATCGTGGTTCTCGA+AGG | - | chr4.1:20865422-20865441 | None:intergenic | 40.0% | |
| ACACATTGACCGAATTTCAG+AGG | + | chr4.1:20862501-20862520 | MS.gene31944:CDS | 40.0% | |
| ACCAGTTTGAACCATTTCAG+AGG | - | chr4.1:20860643-20860662 | None:intergenic | 40.0% | |
| AGAATCAAAGTTGCTTACCC+TGG | - | chr4.1:20865898-20865917 | None:intergenic | 40.0% | |
| AGCAATGTTGATCAATGAGG+GGG | + | chr4.1:20863153-20863172 | MS.gene31944:intron | 40.0% | |
| AGTTCCAAAACCAAAAGGGA+AGG | - | chr4.1:20864822-20864841 | None:intergenic | 40.0% | |
| ATAAACAGAACCTCTGACTC+AGG | - | chr4.1:20861870-20861889 | None:intergenic | 40.0% | |
| ATAGCTCCTTAGACATGCTA+AGG | + | chr4.1:20863472-20863491 | MS.gene31944:intron | 40.0% | |
| CAAGAATTTCATGGACATGG+TGG | + | chr4.1:20859967-20859986 | MS.gene31944:CDS | 40.0% | |
| CACCATGTCCATGAAATTCT+TGG | - | chr4.1:20859969-20859988 | None:intergenic | 40.0% | |
| CACGTCCTTGTGGTTAAATA+TGG | + | chr4.1:20861475-20861494 | MS.gene31944:intron | 40.0% | |
| CACTGCCATATTTAACCACA+AGG | - | chr4.1:20861483-20861502 | None:intergenic | 40.0% | |
| CATTCCGCCAATAATTTAGC+CGG | - | chr4.1:20860454-20860473 | None:intergenic | 40.0% | |
| CGAAATCACATGCAGAAACA+AGG | - | chr4.1:20862848-20862867 | None:intergenic | 40.0% | |
| CGAATCATCATCAAGAAAGG+AGG | + | chr4.1:20862765-20862784 | MS.gene31944:CDS | 40.0% | |
| CTAGCCTATACTATGGAGTT+TGG | + | chr4.1:20860680-20860699 | MS.gene31944:intron | 40.0% | |
| CTTGTGGTTAAATATGGCAG+TGG | + | chr4.1:20861481-20861500 | MS.gene31944:intron | 40.0% | |
| GACCGAATCATCATCAAGAA+AGG | + | chr4.1:20862762-20862781 | MS.gene31944:CDS | 40.0% | |
| GATACTCATACAACACGTGT+TGG | + | chr4.1:20863036-20863055 | MS.gene31944:intron | 40.0% | |
| GATATGTCTTATATGTGCCG+AGG | - | chr4.1:20863111-20863130 | None:intergenic | 40.0% | |
| GGAACATGAGAAAAGACTAG+AGG | - | chr4.1:20864799-20864818 | None:intergenic | 40.0% | |
| GGAAGCAATGTTGATCAATG+AGG | + | chr4.1:20863150-20863169 | MS.gene31944:intron | 40.0% | |
| GGCTAAATTATTGGCGGAAT+GGG | + | chr4.1:20860453-20860472 | MS.gene31944:CDS | 40.0% | |
| GTCTCAAGATCCTCTAATGT+TGG | - | chr4.1:20861553-20861572 | None:intergenic | 40.0% | |
| GTCTTAAGTATCCCCTGTTA+TGG | + | chr4.1:20865928-20865947 | MS.gene31944:intron | 40.0% | |
| GTGAGTAGTTGGATATATGC+AGG | + | chr4.1:20865032-20865051 | MS.gene31944:intron | 40.0% | |
| GTGTCCAAACTCCATAGTAT+AGG | - | chr4.1:20860687-20860706 | None:intergenic | 40.0% | |
| GTTCCAAAACCAAAAGGGAA+GGG | - | chr4.1:20864821-20864840 | None:intergenic | 40.0% | |
| TAGCTCCTTAGACATGCTAA+GGG | + | chr4.1:20863473-20863492 | MS.gene31944:intron | 40.0% | |
| TATAGGGCAGGAAAGAAAGT+TGG | + | chr4.1:20862698-20862717 | MS.gene31944:intron | 40.0% | |
| TCGTAATACGCGATATGGAA+GGG | - | chr4.1:20861287-20861306 | None:intergenic | 40.0% | |
| TCTACAAGTTGTAGCATGGA+AGG | - | chr4.1:20863846-20863865 | None:intergenic | 40.0% | |
| TGAACAAAGACACACAGATG+TGG | - | chr4.1:20860989-20861008 | None:intergenic | 40.0% | |
| TGCACCTTGTAATGTGTTGA+AGG | + | chr4.1:20860713-20860732 | MS.gene31944:intron | 40.0% | |
| TGCCAAGAATTTCATGGACA+TGG | + | chr4.1:20859964-20859983 | MS.gene31944:CDS | 40.0% | |
| TGGATACAAATGCACAGCTT+TGG | + | chr4.1:20862131-20862150 | MS.gene31944:CDS | 40.0% | |
| TGTTGGACATTATCAGGTTC+TGG | + | chr4.1:20863812-20863831 | MS.gene31944:intron | 40.0% | |
| TTAGCATGTCTAAGGAGCTA+TGG | - | chr4.1:20863473-20863492 | None:intergenic | 40.0% | |
| TTCCAAAACCAAAAGGGAAG+GGG | - | chr4.1:20864820-20864839 | None:intergenic | 40.0% | |
| TTGAAGCTCTTGACAATGAC+AGG | + | chr4.1:20860542-20860561 | MS.gene31944:CDS | 40.0% | |
| ! | AAGGTCTTGTCAACATGACT+TGG | - | chr4.1:20861805-20861824 | None:intergenic | 40.0% |
| ! | ACAGCTTTGGTACATCATCA+GGG | + | chr4.1:20862144-20862163 | MS.gene31944:CDS | 40.0% |
| ! | ACCTGATCTGTGACATTTTC+AGG | - | chr4.1:20865731-20865750 | None:intergenic | 40.0% |
| ! | AGGTCTTGTCAACATGACTT+GGG | - | chr4.1:20861804-20861823 | None:intergenic | 40.0% |
| ! | AGTTTATCGAGTTTGATGGC+AGG | - | chr4.1:20860001-20860020 | None:intergenic | 40.0% |
| ! | GGTTTAGATGATCTTTTGGG+GGG | + | chr4.1:20863700-20863719 | MS.gene31944:intron | 40.0% |
| ! | TAGTTTTCATGTCATTGGGG+AGG | + | chr4.1:20862314-20862333 | MS.gene31944:CDS | 40.0% |
| ! | TGCTCTTCATCGTCTACTTT+TGG | + | chr4.1:20862239-20862258 | MS.gene31944:intron | 40.0% |
| ! | TTGTGCTTTGATAGTCCATC+TGG | - | chr4.1:20860484-20860503 | None:intergenic | 40.0% |
| !! | AGACTTATGCTCTGGAACAA+TGG | + | chr4.1:20861569-20861588 | MS.gene31944:CDS | 40.0% |
| !! | GACTTATGCTCTGGAACAAT+GGG | + | chr4.1:20861570-20861589 | MS.gene31944:CDS | 40.0% |
| !! | TTAGAAGGCATTGATTCCCT+CGG | - | chr4.1:20861514-20861533 | None:intergenic | 40.0% |
| !!! | TTTTTTACGCCGCCAAAAGT+AGG | + | chr4.1:20866097-20866116 | MS.gene31944:CDS | 40.0% |
| ACAACACGTGTTGGACAACT+CGG | + | chr4.1:20863045-20863064 | MS.gene31944:intron | 45.0% | |
| ACAAGGGTCGAGAGTGAAAA+TGG | - | chr4.1:20861043-20861062 | None:intergenic | 45.0% | |
| AGGGGAACTCTCTATACTGT+TGG | + | chr4.1:20863723-20863742 | MS.gene31944:intron | 45.0% | |
| AGTGTCAGACAAACTCAGAC+TGG | + | chr4.1:20862946-20862965 | MS.gene31944:intron | 45.0% | |
| ATTAAGGACCTTGCAGACCT+TGG | + | chr4.1:20862530-20862549 | MS.gene31944:CDS | 45.0% | |
| ATTATGACGAGTTCCCATCC+AGG | + | chr4.1:20865877-20865896 | MS.gene31944:CDS | 45.0% | |
| ATTGTGGTACTCGCTGTAGA+TGG | + | chr4.1:20865186-20865205 | MS.gene31944:intron | 45.0% | |
| CAAAGTTGCTTACCCTGGAT+GGG | - | chr4.1:20865893-20865912 | None:intergenic | 45.0% | |
| CATGACACGCCTAATCCTTT+AGG | - | chr4.1:20862905-20862924 | None:intergenic | 45.0% | |
| CATGTCAATCGTTCATTGGC+TGG | + | chr4.1:20863961-20863980 | MS.gene31944:intron | 45.0% | |
| CCTGCCACACAAATGACATA+AGG | - | chr4.1:20865965-20865984 | None:intergenic | 45.0% | |
| CGGCTAAATTATTGGCGGAA+TGG | + | chr4.1:20860452-20860471 | MS.gene31944:CDS | 45.0% | |
| CTAAAGGATTAGGCGTGTCA+TGG | + | chr4.1:20862903-20862922 | MS.gene31944:intron | 45.0% | |
| CTCGTAATACGCGATATGGA+AGG | - | chr4.1:20861288-20861307 | None:intergenic | 45.0% | |
| CTGGTCAAACTTCAACAGGT+TGG | + | chr4.1:20862554-20862573 | MS.gene31944:intron | 45.0% | |
| GAGCTTCTCTGTCTCTGTAT+CGG | - | chr4.1:20861992-20862011 | None:intergenic | 45.0% | |
| GCAATGTTGATCAATGAGGG+GGG | + | chr4.1:20863154-20863173 | MS.gene31944:intron | 45.0% | |
| GCCTGAAAATGTCACAGATC+AGG | + | chr4.1:20865727-20865746 | MS.gene31944:CDS | 45.0% | |
| GGATCTTGAGACTTATGCTC+TGG | + | chr4.1:20861561-20861580 | MS.gene31944:CDS | 45.0% | |
| GTGTGGCAGGATGTATTTGA+AGG | + | chr4.1:20865975-20865994 | MS.gene31944:intron | 45.0% | |
| TATGAAGCACGGACACCTAA+AGG | + | chr4.1:20862887-20862906 | MS.gene31944:intron | 45.0% | |
| TCAAAGTTGCTTACCCTGGA+TGG | - | chr4.1:20865894-20865913 | None:intergenic | 45.0% | |
| TCATCTGCGAAGCTATTCTC+AGG | + | chr4.1:20860035-20860054 | MS.gene31944:CDS | 45.0% | |
| TCTCCTTCTTGCAGGAAGAT+CGG | + | chr4.1:20861087-20861106 | MS.gene31944:intron | 45.0% | |
| TGTGCAACAGATTCTCAGCA+AGG | - | chr4.1:20862355-20862374 | None:intergenic | 45.0% | |
| TTAAGGACCTTGCAGACCTT+GGG | + | chr4.1:20862531-20862550 | MS.gene31944:CDS | 45.0% | |
| TTATGACGAGTTCCCATCCA+GGG | + | chr4.1:20865878-20865897 | MS.gene31944:CDS | 45.0% | |
| TTCTTTGCTTCGACACACCT+CGG | + | chr4.1:20863091-20863110 | MS.gene31944:intron | 45.0% | |
| TTCTTTGCTTCGACACTCCT+TGG | + | chr4.1:20862992-20863011 | MS.gene31944:intron | 45.0% | |
| TTGGCAATGATCCTAACCTC+AGG | - | chr4.1:20859950-20859969 | None:intergenic | 45.0% | |
| TTTCCGATCTTCCTGCAAGA+AGG | - | chr4.1:20861093-20861112 | None:intergenic | 45.0% | |
| ! | CACAGCTTTGGTACATCATC+AGG | + | chr4.1:20862143-20862162 | MS.gene31944:CDS | 45.0% |
| ! | CCTTATGTCATTTGTGTGGC+AGG | + | chr4.1:20865962-20865981 | MS.gene31944:intron | 45.0% |
| ! | GTGGTGACAGATTAGGTTGT+GGG | + | chr4.1:20865815-20865834 | MS.gene31944:intron | 45.0% |
| !! | ACCTGTGCCGGCTAAATTAT+TGG | + | chr4.1:20860444-20860463 | MS.gene31944:CDS | 45.0% |
| !! | GCCTCTGAAATGGTTCAAAC+TGG | + | chr4.1:20860639-20860658 | MS.gene31944:intron | 45.0% |
| !! | TAGATGATCTTTTGGGGGGA+GGG | + | chr4.1:20863704-20863723 | MS.gene31944:intron | 45.0% |
| !! | TCATCGTCTACTTTTGGTGC+AGG | + | chr4.1:20862245-20862264 | MS.gene31944:intron | 45.0% |
| !! | TGTGCCGGCTAAATTATTGG+CGG | + | chr4.1:20860447-20860466 | MS.gene31944:CDS | 45.0% |
| !! | TTAGATGATCTTTTGGGGGG+AGG | + | chr4.1:20863703-20863722 | MS.gene31944:intron | 45.0% |
| !! | TTATGCTCTGGAACAATGGG+AGG | + | chr4.1:20861573-20861592 | MS.gene31944:CDS | 45.0% |
| !!! | TTCCCCTTCCCTTTTGGTTT+TGG | + | chr4.1:20864815-20864834 | MS.gene31944:intron | 45.0% |
| !! | AGTATATATTTAATTATATA+TGG | + | chr4.1:20863679-20863698 | MS.gene31944:intron | 5.0% |
| !!! | ATAAGTAAATTTTTTTTTAT+AGG | + | chr4.1:20864671-20864690 | MS.gene31944:intron | 5.0% |
| !!! | TAAGTAAATTTTTTTTTATA+GGG | + | chr4.1:20864672-20864691 | MS.gene31944:intron | 5.0% |
| !!! | TAATTTTTATTTTTTTGAAT+GGG | + | chr4.1:20865590-20865609 | MS.gene31944:intron | 5.0% |
| !!! | TTAATTTTTATTTTTTTGAA+TGG | + | chr4.1:20865589-20865608 | MS.gene31944:intron | 5.0% |
| CAATGGCATTACAGCAGACC+AGG | + | chr4.1:20865123-20865142 | MS.gene31944:CDS | 50.0% | |
| CGACGTCTTAGTGTCGTGTT+AGG | + | chr4.1:20863437-20863456 | MS.gene31944:intron | 50.0% | |
| CTCCACCCTTAGCATGTCTA+AGG | - | chr4.1:20863481-20863500 | None:intergenic | 50.0% | |
| CTCCTTAGACATGCTAAGGG+TGG | + | chr4.1:20863476-20863495 | MS.gene31944:intron | 50.0% | |
| CTTAGACATGCTAAGGGTGG+AGG | + | chr4.1:20863479-20863498 | MS.gene31944:intron | 50.0% | |
| GACACTTGTCGTACGAGTGT+CGG | - | chr4.1:20862932-20862951 | None:intergenic | 50.0% | |
| GCACGGACACCTAAAGGATT+AGG | + | chr4.1:20862893-20862912 | MS.gene31944:intron | 50.0% | |
| GCATTTGGTCGTCAAGTCTG+AGG | + | chr4.1:20866055-20866074 | MS.gene31944:CDS | 50.0% | |
| GCCAATAATTTAGCCGGCAC+AGG | - | chr4.1:20860448-20860467 | None:intergenic | 50.0% | |
| GTGTCCGTGCTTCATAGCTA+AGG | - | chr4.1:20862883-20862902 | None:intergenic | 50.0% | |
| GTTGAAGTTTGACCAGCCCA+AGG | - | chr4.1:20862550-20862569 | None:intergenic | 50.0% | |
| TAGCTGGTAACACGTCCTTG+TGG | + | chr4.1:20861465-20861484 | MS.gene31944:intron | 50.0% | |
| TCATCCTCGTGTTGCACAGA+GGG | + | chr4.1:20865694-20865713 | MS.gene31944:CDS | 50.0% | |
| TGCTTCGACACTCCTTGGAT+CGG | + | chr4.1:20862997-20863016 | MS.gene31944:intron | 50.0% | |
| TGTGAGGCTCCCAACATTAG+AGG | + | chr4.1:20861540-20861559 | MS.gene31944:CDS | 50.0% | |
| ! | CTCATGTTCCCCTTCCCTTT+TGG | + | chr4.1:20864809-20864828 | MS.gene31944:intron | 50.0% |
| ! | GCATATTGATGGACCTGTGC+CGG | + | chr4.1:20860432-20860451 | MS.gene31944:CDS | 50.0% |
| ! | GGTGGTGACAGATTAGGTTG+TGG | + | chr4.1:20865814-20865833 | MS.gene31944:intron | 50.0% |
| !! | AGATGATCTTTTGGGGGGAG+GGG | + | chr4.1:20863705-20863724 | MS.gene31944:intron | 50.0% |
| !! | CGTTCATTGGCTGGCTTTAG+TGG | + | chr4.1:20863970-20863989 | MS.gene31944:intron | 50.0% |
| !! | CTACTTTTGGTGCAGGAGAG+AGG | + | chr4.1:20862252-20862271 | MS.gene31944:intron | 50.0% |
| !! | GTGACATTTTCAGGCACTGC+TGG | - | chr4.1:20865722-20865741 | None:intergenic | 50.0% |
| !! | TGGGCTGGTCAAACTTCAAC+AGG | + | chr4.1:20862550-20862569 | MS.gene31944:CDS | 50.0% |
| ATGGCAGTGGAACTTTGCCG+AGG | + | chr4.1:20861494-20861513 | MS.gene31944:intron | 55.0% | |
| CTCATCCTCGTGTTGCACAG+AGG | + | chr4.1:20865693-20865712 | MS.gene31944:CDS | 55.0% | |
| GACTGCGCCAGAGAATGGAA+TGG | + | chr4.1:20866005-20866024 | MS.gene31944:CDS | 55.0% | |
| TGGCAGTGGAACTTTGCCGA+GGG | + | chr4.1:20861495-20861514 | MS.gene31944:intron | 55.0% | |
| !! | CAGGAGAGAGGTGTTGATGC+AGG | + | chr4.1:20862264-20862283 | MS.gene31944:intron | 55.0% |
| CGTGTGACTGCGCCAGAGAA+TGG | + | chr4.1:20866000-20866019 | MS.gene31944:CDS | 60.0% | |
| GCGGAATGGGTGCTTCCAGA+TGG | + | chr4.1:20860466-20860485 | MS.gene31944:CDS | 60.0% | |
| GGTACCCTCTGTGCAACACG+AGG | - | chr4.1:20865701-20865720 | None:intergenic | 60.0% | |
| TGACCAGCCCAAGGTCTGCA+AGG | - | chr4.1:20862541-20862560 | None:intergenic | 60.0% | |
| !! | AGGTGTCGGACACCGATCCA+AGG | - | chr4.1:20863012-20863031 | None:intergenic | 60.0% |
| AGCGGCGTCTCCTGAGTCAG+AGG | + | chr4.1:20861857-20861876 | MS.gene31944:CDS | 65.0% | |
| GGACCTTGCAGACCTTGGGC+TGG | + | chr4.1:20862535-20862554 | MS.gene31944:CDS | 65.0% | |
| TCTGACTCAGGAGACGCCGC+TGG | - | chr4.1:20861858-20861877 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 20859944 | 20866118 | 20859944 | ID=MS.gene31944 |
| chr4.1 | mRNA | 20859944 | 20866118 | 20859944 | ID=MS.gene31944.t1;Parent=MS.gene31944 |
| chr4.1 | exon | 20859944 | 20860056 | 20859944 | ID=MS.gene31944.t1.exon1;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20859944 | 20860056 | 20859944 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20860390 | 20860563 | 20860390 | ID=MS.gene31944.t1.exon2;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20860390 | 20860563 | 20860390 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20861101 | 20861169 | 20861101 | ID=MS.gene31944.t1.exon3;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20861101 | 20861169 | 20861101 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20861501 | 20861594 | 20861501 | ID=MS.gene31944.t1.exon4;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20861501 | 20861594 | 20861501 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20861778 | 20861878 | 20861778 | ID=MS.gene31944.t1.exon5;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20861778 | 20861878 | 20861778 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20861998 | 20862043 | 20861998 | ID=MS.gene31944.t1.exon6;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20861998 | 20862043 | 20861998 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20862127 | 20862186 | 20862127 | ID=MS.gene31944.t1.exon7;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20862127 | 20862186 | 20862127 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20862267 | 20862335 | 20862267 | ID=MS.gene31944.t1.exon8;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20862267 | 20862335 | 20862267 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20862488 | 20862571 | 20862488 | ID=MS.gene31944.t1.exon9;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20862488 | 20862571 | 20862488 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20862703 | 20862786 | 20862703 | ID=MS.gene31944.t1.exon10;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20862703 | 20862786 | 20862703 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20864106 | 20864191 | 20864106 | ID=MS.gene31944.t1.exon11;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20864106 | 20864191 | 20864106 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20865054 | 20865144 | 20865054 | ID=MS.gene31944.t1.exon12;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20865054 | 20865144 | 20865054 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20865668 | 20865748 | 20865668 | ID=MS.gene31944.t1.exon13;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20865668 | 20865748 | 20865668 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20865825 | 20865899 | 20865825 | ID=MS.gene31944.t1.exon14;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20865825 | 20865899 | 20865825 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| chr4.1 | exon | 20865984 | 20866118 | 20865984 | ID=MS.gene31944.t1.exon15;Parent=MS.gene31944.t1 |
| chr4.1 | CDS | 20865984 | 20866118 | 20865984 | ID=cds.MS.gene31944.t1;Parent=MS.gene31944.t1 |
| Gene Sequence |
| Protein sequence |
