Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32081.t1 | XP_003590705.2 | 94.9 | 995 | 48 | 2 | 1 | 995 | 3 | 994 | 0.00E+00 | 1811.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32081.t1 | A4FUF0 | 35.2 | 91 | 55 | 2 | 365 | 455 | 8 | 94 | 9.7e-08 | 60.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32081.t1 | G7I2L8 | 94.9 | 995 | 48 | 2 | 1 | 995 | 3 | 994 | 0.0e+00 | 1811.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04915 | MS.gene32081 | 0.822393 | 2.43E-53 | -1.69E-46 |
MS.gene04917 | MS.gene32081 | 0.826549 | 2.55E-54 | -1.69E-46 |
MS.gene050654 | MS.gene32081 | 0.814084 | 1.84E-51 | -1.69E-46 |
MS.gene050762 | MS.gene32081 | 0.817047 | 4.04E-52 | -1.69E-46 |
MS.gene050763 | MS.gene32081 | 0.81431 | 1.64E-51 | -1.69E-46 |
MS.gene052609 | MS.gene32081 | 0.803575 | 3.27E-49 | -1.69E-46 |
MS.gene058289 | MS.gene32081 | 0.800734 | 1.25E-48 | -1.69E-46 |
MS.gene058638 | MS.gene32081 | 0.825583 | 4.33E-54 | -1.69E-46 |
MS.gene058639 | MS.gene32081 | 0.825153 | 5.47E-54 | -1.69E-46 |
MS.gene058647 | MS.gene32081 | 0.806349 | 8.59E-50 | -1.69E-46 |
MS.gene058758 | MS.gene32081 | 0.835759 | 1.39E-56 | -1.69E-46 |
MS.gene059725 | MS.gene32081 | 0.815783 | 7.75E-52 | -1.69E-46 |
MS.gene060380 | MS.gene32081 | 0.802793 | 4.74E-49 | -1.69E-46 |
MS.gene060637 | MS.gene32081 | 0.802225 | 6.21E-49 | -1.69E-46 |
MS.gene060932 | MS.gene32081 | 0.849303 | 3.53E-60 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene32081 | MS.gene067033 | PPI |
MS.gene07741 | MS.gene32081 | PPI |
MS.gene32081 | MS.gene007196 | PPI |
MS.gene32081 | MS.gene75575 | PPI |
MS.gene46640 | MS.gene32081 | PPI |
MS.gene32081 | MS.gene24697 | PPI |
MS.gene32081 | MS.gene045235 | PPI |
MS.gene32081 | MS.gene55120 | PPI |
MS.gene77911 | MS.gene32081 | PPI |
MS.gene32081 | MS.gene050299 | PPI |
MS.gene92710 | MS.gene32081 | PPI |
MS.gene32081 | MS.gene045233 | PPI |
MS.gene32081 | MS.gene95527 | PPI |
MS.gene045232 | MS.gene32081 | PPI |
MS.gene32081 | MS.gene037044 | PPI |
MS.gene79130 | MS.gene32081 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32081.t1 | MTR_1g072780 | 94.874 | 995 | 48 | 2 | 1 | 995 | 3 | 994 | 0.0 | 1890 |
MS.gene32081.t1 | MTR_1g049120 | 51.309 | 764 | 297 | 18 | 281 | 995 | 201 | 938 | 0.0 | 662 |
MS.gene32081.t1 | MTR_4g036445 | 49.733 | 374 | 161 | 9 | 314 | 670 | 255 | 618 | 1.25e-106 | 345 |
MS.gene32081.t1 | MTR_2g104120 | 33.281 | 637 | 324 | 18 | 363 | 966 | 258 | 826 | 8.92e-82 | 284 |
MS.gene32081.t1 | MTR_2g047912 | 43.885 | 417 | 194 | 13 | 563 | 969 | 286 | 672 | 1.14e-78 | 271 |
MS.gene32081.t1 | MTR_1g066890 | 48.035 | 229 | 98 | 4 | 360 | 586 | 315 | 524 | 4.62e-60 | 222 |
MS.gene32081.t1 | MTR_1g066890 | 50.538 | 93 | 43 | 1 | 877 | 966 | 810 | 902 | 3.91e-19 | 93.6 |
MS.gene32081.t1 | MTR_2g104980 | 47.097 | 155 | 56 | 2 | 359 | 508 | 224 | 357 | 3.86e-40 | 155 |
MS.gene32081.t1 | MTR_6g005840 | 37.500 | 184 | 112 | 3 | 363 | 545 | 272 | 453 | 5.34e-30 | 128 |
MS.gene32081.t1 | MTR_6g005840 | 37.500 | 184 | 112 | 3 | 363 | 545 | 230 | 411 | 7.33e-30 | 128 |
MS.gene32081.t1 | MTR_6g005960 | 37.500 | 184 | 112 | 3 | 363 | 545 | 212 | 393 | 3.04e-28 | 122 |
MS.gene32081.t1 | MTR_7g113180 | 33.708 | 178 | 115 | 3 | 363 | 537 | 87 | 264 | 1.86e-25 | 114 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32081.t1 | AT3G09670 | 53.646 | 192 | 88 | 1 | 362 | 552 | 196 | 387 | 2.49e-61 | 223 |
MS.gene32081.t1 | AT3G09670 | 53.646 | 192 | 88 | 1 | 362 | 552 | 196 | 387 | 2.49e-61 | 223 |
MS.gene32081.t1 | AT5G02950 | 48.148 | 189 | 97 | 1 | 355 | 542 | 87 | 275 | 5.11e-54 | 200 |
MS.gene32081.t1 | AT5G02950 | 56.098 | 82 | 36 | 0 | 883 | 964 | 542 | 623 | 1.83e-19 | 94.4 |
MS.gene32081.t1 | AT5G02950 | 48.148 | 189 | 97 | 1 | 355 | 542 | 87 | 275 | 5.11e-54 | 200 |
MS.gene32081.t1 | AT5G02950 | 56.098 | 82 | 36 | 0 | 883 | 964 | 542 | 623 | 1.83e-19 | 94.4 |
MS.gene32081.t1 | AT3G54760 | 33.639 | 327 | 162 | 9 | 666 | 982 | 472 | 753 | 1.91e-41 | 164 |
MS.gene32081.t1 | AT3G54760 | 33.639 | 327 | 162 | 9 | 666 | 982 | 503 | 784 | 2.97e-41 | 164 |
MS.gene32081.t1 | AT5G40340 | 41.758 | 182 | 100 | 6 | 363 | 541 | 125 | 303 | 3.83e-30 | 129 |
MS.gene32081.t1 | AT5G40340 | 41.758 | 182 | 100 | 6 | 363 | 541 | 125 | 303 | 4.15e-30 | 129 |
MS.gene32081.t1 | AT5G27650 | 34.426 | 183 | 107 | 4 | 363 | 537 | 171 | 348 | 8.27e-23 | 105 |
MS.gene32081.t1 | AT3G05430 | 41.071 | 112 | 66 | 0 | 363 | 474 | 133 | 244 | 1.90e-22 | 104 |
MS.gene32081.t1 | AT3G05430 | 41.071 | 112 | 66 | 0 | 363 | 474 | 133 | 244 | 1.91e-22 | 104 |
MS.gene32081.t1 | AT3G27860 | 32.203 | 295 | 160 | 13 | 360 | 637 | 58 | 329 | 3.78e-20 | 96.7 |
MS.gene32081.t1 | AT3G27860 | 32.203 | 295 | 160 | 13 | 360 | 637 | 58 | 329 | 3.78e-20 | 96.7 |
MS.gene32081.t1 | AT3G48187 | 27.604 | 192 | 114 | 5 | 363 | 549 | 106 | 277 | 9.66e-14 | 76.3 |
Find 242 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGGGAAAGTTGGTATTTC+TGG | 0.134890 | 1.2:+55557572 | MS.gene32081:CDS |
TGCTATTTGGTAGCATATTA+TGG | 0.149078 | 1.2:+55558166 | MS.gene32081:CDS |
AGCAATAGTCTTTCGTTTCT+TGG | 0.161677 | 1.2:-55558902 | None:intergenic |
GTCAAAAGACGGGTCGAATT+TGG | 0.171080 | 1.2:+55558313 | MS.gene32081:CDS |
GCTAAACAGTTCAACATATT+TGG | 0.174863 | 1.2:+55559804 | MS.gene32081:CDS |
TGGAGGAGTTGAAGGGTTTC+AGG | 0.180597 | 1.2:+55557181 | MS.gene32081:CDS |
GGAGTTTCTTCTCTGATTTC+AGG | 0.181757 | 1.2:+55559283 | MS.gene32081:CDS |
ACAAAACAATCATTTAAAAT+TGG | 0.214750 | 1.2:+55558997 | MS.gene32081:CDS |
TTCTGAGTCTCCTCAAAATT+AGG | 0.233682 | 1.2:-55559150 | None:intergenic |
GGACTTGGTAGTTGGGGTTT+TGG | 0.236358 | 1.2:+55557055 | MS.gene32081:CDS |
CCCTCTATGTTGAAATATTC+TGG | 0.237737 | 1.2:+55559060 | MS.gene32081:CDS |
GCTTGCATTCTACCGGTTAA+AGG | 0.242276 | 1.2:+55558561 | MS.gene32081:CDS |
TTTATCAGTATCATTAATTA+AGG | 0.246050 | 1.2:-55558641 | None:intergenic |
TTCTGTGAATGATCTGGTTT+GGG | 0.252633 | 1.2:+55558054 | MS.gene32081:CDS |
TCTGTCTCAGATTCCTTTAA+AGG | 0.257461 | 1.2:-55559708 | None:intergenic |
GGAGGAGGTAGATGAAATAT+TGG | 0.259770 | 1.2:+55557505 | MS.gene32081:CDS |
AAAGCCTCCAGTTGGAAAAT+TGG | 0.259834 | 1.2:-55558503 | None:intergenic |
TATAGTTTCTTGAATGTTAT+AGG | 0.262506 | 1.2:+55559261 | MS.gene32081:CDS |
TCACAGGAAGAGAAGGAAAT+TGG | 0.277243 | 1.2:+55557767 | MS.gene32081:CDS |
ATACAAAAGTTGGCACTAAA+AGG | 0.294012 | 1.2:+55559349 | MS.gene32081:CDS |
TCAGACAAAGAGAAGGAAAT+TGG | 0.297811 | 1.2:+55557923 | MS.gene32081:CDS |
TTCTTCTGCCTTTCACCCTT+GGG | 0.310129 | 1.2:-55558942 | None:intergenic |
TTTCTTCTGCCTTTCACCCT+TGG | 0.316743 | 1.2:-55558943 | None:intergenic |
TCATCAAAGTCAAATGTTTC+AGG | 0.317862 | 1.2:-55559396 | None:intergenic |
ATCATTGTGGCCAGTGATCC+TGG | 0.318358 | 1.2:+55559312 | MS.gene32081:CDS |
AGAAGGTAAGAGCGAGAATA+AGG | 0.323243 | 1.2:+55557421 | MS.gene32081:CDS |
AACATTTGACTTTGATGATC+TGG | 0.323353 | 1.2:+55559401 | MS.gene32081:CDS |
GGTCTAAGCTGAAGCCCTTT+AGG | 0.326796 | 1.2:+55558215 | MS.gene32081:CDS |
TGTTCCAGGAAACAGTATTT+TGG | 0.330526 | 1.2:+55559546 | MS.gene32081:CDS |
TCTGAGTCTCCTCAAAATTA+GGG | 0.332007 | 1.2:-55559149 | None:intergenic |
GCTACCAAAATACTGTTTCC+TGG | 0.332567 | 1.2:-55559550 | None:intergenic |
GATGACTGATGATGTTATTC+AGG | 0.335880 | 1.2:+55557856 | MS.gene32081:CDS |
ACCTCCACAATATTGTAATT+CGG | 0.343928 | 1.2:-55558599 | None:intergenic |
GTCGATGCGCAAGCTGCTTT+CGG | 0.344623 | 1.2:+55559777 | MS.gene32081:CDS |
ATTACAATATTGTGGAGGTT+TGG | 0.350069 | 1.2:+55558603 | MS.gene32081:CDS |
GCTATTTGGTAGCATATTAT+GGG | 0.350097 | 1.2:+55558167 | MS.gene32081:CDS |
CCTCCACAATATTGTAATTC+GGG | 0.351991 | 1.2:-55558598 | None:intergenic |
ATCTTGTCATAAGTATCTTT+AGG | 0.354335 | 1.2:-55558355 | None:intergenic |
TTATGACAAGATTAAACTTC+AGG | 0.357337 | 1.2:+55558366 | MS.gene32081:CDS |
TTTCTGTGAATGATCTGGTT+TGG | 0.357507 | 1.2:+55558053 | MS.gene32081:CDS |
TATAGAGGTGGAGGGATCTA+TGG | 0.364058 | 1.2:+55557013 | MS.gene32081:CDS |
ATAGTTTCTTGAATGTTATA+GGG | 0.367131 | 1.2:+55559262 | MS.gene32081:CDS |
CAAGTTGTTGGGTCATTAGA+AGG | 0.367450 | 1.2:+55557404 | MS.gene32081:CDS |
CATGTCCCCATGAAGAGTTC+AGG | 0.376926 | 1.2:+55558007 | MS.gene32081:CDS |
TCAAAAGACGGGTCGAATTT+GGG | 0.377860 | 1.2:+55558314 | MS.gene32081:CDS |
TTCAGGGTTCTCAAGCTGTT+GGG | 0.378938 | 1.2:+55557198 | MS.gene32081:CDS |
TGAGAAGGAGGTAGTTGAGT+TGG | 0.387816 | 1.2:+55557238 | MS.gene32081:CDS |
CTGAGAAGGACTTGGTAGTT+GGG | 0.388392 | 1.2:+55557048 | MS.gene32081:CDS |
TGATGAGTGATGATGTTATT+CGG | 0.391524 | 1.2:+55557696 | MS.gene32081:CDS |
CGAGAATAAGGTAGTTGAGT+TGG | 0.391904 | 1.2:+55557433 | MS.gene32081:CDS |
AAAGATGTGGGTCTTACTAT+TGG | 0.392531 | 1.2:+55557161 | MS.gene32081:CDS |
CTTGCATTCTACCGGTTAAA+GGG | 0.397273 | 1.2:+55558562 | MS.gene32081:CDS |
AAGTATTCCATAAGCTTCTC+AGG | 0.401659 | 1.2:-55558469 | None:intergenic |
CTTACTATTGGAGGAGTTGA+AGG | 0.406138 | 1.2:+55557173 | MS.gene32081:CDS |
TTTCAGGGTTCTCAAGCTGT+TGG | 0.406912 | 1.2:+55557197 | MS.gene32081:CDS |
AAAGATGTGAATGTTGCTAT+TGG | 0.407198 | 1.2:+55557356 | MS.gene32081:CDS |
ATAGATCCCTCCACCTCTAT+AGG | 0.407318 | 1.2:-55557011 | None:intergenic |
TAATCACTGTGGGTAGAATC+TGG | 0.412595 | 1.2:-55558832 | None:intergenic |
AACTGGAGGCTTTGATCGAT+TGG | 0.414850 | 1.2:+55558513 | MS.gene32081:CDS |
GATGAGTGATGATGTTATTC+GGG | 0.418737 | 1.2:+55557697 | MS.gene32081:CDS |
AGGGTTGCTAGCCAACTTAC+TGG | 0.421445 | 1.2:+55559033 | MS.gene32081:CDS |
CTTGCGACGGGATTGGTTTG+TGG | 0.423101 | 1.2:-55558740 | None:intergenic |
ATTTAATGATGCCGAAGAAC+AGG | 0.424640 | 1.2:+55557955 | MS.gene32081:CDS |
AAGAAACTATAATCTCCCTT+TGG | 0.428080 | 1.2:-55559249 | None:intergenic |
AAAATACTGTTTCCTGGAAC+AGG | 0.428323 | 1.2:-55559544 | None:intergenic |
GAAGGGGCGCGCTCATAGTC+TGG | 0.428448 | 1.2:-55559483 | None:intergenic |
TAGGAGGAGGAGGATTGTCT+AGG | 0.428538 | 1.2:-55556986 | None:intergenic |
TTCGTTTCTTGGAAAGGATA+GGG | 0.437828 | 1.2:-55558891 | None:intergenic |
AATGATCAAGATGCAATTCC+TGG | 0.437834 | 1.2:-55559905 | None:intergenic |
TAAGAGAAATGTGACCTAAA+GGG | 0.437918 | 1.2:-55558229 | None:intergenic |
TCAGACAAAGAGAAGGAAAT+CGG | 0.440506 | 1.2:+55557608 | MS.gene32081:CDS |
GAGAAGGAGGTAGTTGAGTT+GGG | 0.442262 | 1.2:+55557239 | MS.gene32081:CDS |
AGGTGGAGGGATCTATGGTT+AGG | 0.442305 | 1.2:+55557018 | MS.gene32081:CDS |
TTGAAGATTCTCAAGTTGTT+GGG | 0.443017 | 1.2:+55557393 | MS.gene32081:CDS |
AGTTAATGACACCGATGAAC+AGG | 0.443500 | 1.2:+55557799 | MS.gene32081:CDS |
CATAAGCTTCTCAGGTGAAA+AGG | 0.450721 | 1.2:-55558461 | None:intergenic |
ATAAGAGAAATGTGACCTAA+AGG | 0.451027 | 1.2:-55558230 | None:intergenic |
GAGAATAAGGTAGTTGAGTT+GGG | 0.451112 | 1.2:+55557434 | MS.gene32081:CDS |
TTTGAAGATTCTCAAGTTGT+TGG | 0.451500 | 1.2:+55557392 | MS.gene32081:CDS |
GATTCGACAAGAGCCAAGTT+TGG | 0.453596 | 1.2:+55558405 | MS.gene32081:CDS |
GAATCTGGATTCCCATTGGC+TGG | 0.453644 | 1.2:-55558817 | None:intergenic |
GTTTACGCTTGCGACGGGAT+TGG | 0.454998 | 1.2:-55558747 | None:intergenic |
GGAGGAGTTGAAGGGTTTCA+GGG | 0.455076 | 1.2:+55557182 | MS.gene32081:CDS |
TGAAGGTAAGAGTGAGAAGG+AGG | 0.456381 | 1.2:+55557226 | MS.gene32081:CDS |
GATTTCTTTCCCAGGATCAC+TGG | 0.460398 | 1.2:-55559322 | None:intergenic |
TCCAGAATATTTCAACATAG+AGG | 0.462499 | 1.2:-55559061 | None:intergenic |
CTACGTGTATAAACATGAAC+AGG | 0.463107 | 1.2:-55559519 | None:intergenic |
AATGGTGATCAAACTGGAAC+CGG | 0.464649 | 1.2:+55558706 | MS.gene32081:CDS |
ATAAGTATCTTTAGGTATGC+AGG | 0.467302 | 1.2:-55558347 | None:intergenic |
GAGTCAGATGAAGGGAAAGT+TGG | 0.469831 | 1.2:+55557722 | MS.gene32081:CDS |
AAGTTCAAAACAAGTTCAGC+AGG | 0.470527 | 1.2:-55559624 | None:intergenic |
AGGAGGAGGAGGATTGTCTA+GGG | 0.470660 | 1.2:-55556985 | None:intergenic |
AGCAAGAGTAACCCTTTAAC+CGG | 0.471478 | 1.2:-55558573 | None:intergenic |
TCAGGAGATTCACCTATGGC+TGG | 0.473273 | 1.2:-55559378 | None:intergenic |
ACTGAGAAGGACTTGGTAGT+TGG | 0.475703 | 1.2:+55557047 | MS.gene32081:CDS |
ATTCAGGTTGAGTCAGATGA+AGG | 0.475737 | 1.2:+55557872 | MS.gene32081:CDS |
GAGGTAGTTGAGTTGGGTGG+TGG | 0.478840 | 1.2:+55557245 | MS.gene32081:CDS |
AGAAGCCATCCATGGTGGCC+AGG | 0.480090 | 1.2:+55558085 | MS.gene32081:CDS |
CTCAGCTGCTTGCATTCTAC+CGG | 0.481107 | 1.2:+55558554 | MS.gene32081:CDS |
TTCAGGTTGTTGAAAACTGT+GGG | 0.482036 | 1.2:+55558383 | MS.gene32081:CDS |
GAGTCGGATGGAGGGAAAGT+TGG | 0.483400 | 1.2:+55557563 | MS.gene32081:CDS |
GAAATCTTACATACAAAAGT+TGG | 0.484241 | 1.2:+55559339 | MS.gene32081:CDS |
TAGTCTTTCGTTTCTTGGAA+AGG | 0.484292 | 1.2:-55558897 | None:intergenic |
TTCTCATCTATATAACCAGC+AGG | 0.485307 | 1.2:-55559597 | None:intergenic |
GCAGAAGAAGAAGGAGGAGG+AGG | 0.486421 | 1.2:+55557490 | MS.gene32081:CDS |
GTTATTTAAGCTTGTTTCTG+AGG | 0.490022 | 1.2:-55559667 | None:intergenic |
TCCTACTCCTATAGAGGTGG+AGG | 0.496765 | 1.2:+55557004 | MS.gene32081:CDS |
ATAAGGTAGTTGAGTTGGGT+GGG | 0.498419 | 1.2:+55557438 | MS.gene32081:CDS |
GGAACGTACGCGTGGAATGA+AGG | 0.499626 | 1.2:+55558193 | MS.gene32081:CDS |
ATACACGTAGGTCCTGTTCC+AGG | 0.500440 | 1.2:+55559532 | MS.gene32081:CDS |
ATTCGGGTTGAGTCAGATGA+AGG | 0.500442 | 1.2:+55557713 | MS.gene32081:CDS |
TGAGAAGATTGATGATTCAC+AGG | 0.500630 | 1.2:+55557751 | MS.gene32081:CDS |
TTTGATGGGTCAGTTGAGGA+GGG | 0.501151 | 1.2:+55557332 | MS.gene32081:CDS |
ATCAGTACGCTGACGTCCCA+AGG | 0.502539 | 1.2:+55558926 | MS.gene32081:CDS |
GATTCTGATTTGTGCATACA+AGG | 0.502676 | 1.2:+55557077 | MS.gene32081:CDS |
CTCCTCAAAATTAGGGGAGA+AGG | 0.503090 | 1.2:-55559142 | None:intergenic |
TCTCTGATGGCAGATGGTAA+TGG | 0.503504 | 1.2:+55559090 | MS.gene32081:CDS |
GACCACATTAAGTTCAACAT+TGG | 0.504411 | 1.2:-55559928 | None:intergenic |
GATGTGGGTCTTACTATTGG+AGG | 0.505356 | 1.2:+55557164 | MS.gene32081:CDS |
ATTATGTTTACGCTTGCGAC+GGG | 0.508564 | 1.2:-55558752 | None:intergenic |
TCCTCCTCCTACTCCTATAG+AGG | 0.509679 | 1.2:+55556998 | MS.gene32081:CDS |
GAAGCAACTTTGCATAAAGA+TGG | 0.511858 | 1.2:+55557272 | MS.gene32081:CDS |
GAGTGCTGTAGATTCTGCTT+TGG | 0.512585 | 1.2:+55558285 | MS.gene32081:CDS |
CGTAAACATAATCTAAAGGT+TGG | 0.517378 | 1.2:+55558763 | MS.gene32081:CDS |
ATGTCCCCATGAAGAGTTCA+GGG | 0.518410 | 1.2:+55558008 | MS.gene32081:CDS |
TCTATAGGAGTAGGAGGAGG+AGG | 0.520528 | 1.2:-55556996 | None:intergenic |
TTTGCTATCTTTACTTCAGT+GGG | 0.521231 | 1.2:+55559215 | MS.gene32081:CDS |
TTGGTAGCATATTATGGGGA+TGG | 0.521750 | 1.2:+55558172 | MS.gene32081:CDS |
TCTGTCCTGGCCACCATGGA+TGG | 0.523479 | 1.2:-55558090 | None:intergenic |
TTTCGTTTCTTGGAAAGGAT+AGG | 0.527147 | 1.2:-55558892 | None:intergenic |
ATTTGCTATCTTTACTTCAG+TGG | 0.528385 | 1.2:+55559214 | MS.gene32081:CDS |
GCAATGGCCTCATCATCATT+CGG | 0.528387 | 1.2:-55558856 | None:intergenic |
AGGACAGATATTTGATCCCT+CGG | 0.529841 | 1.2:+55558105 | MS.gene32081:CDS |
AGGAAGCAAGCGGGCAAGAG+TGG | 0.530153 | 1.2:+55559740 | MS.gene32081:CDS |
TAATAAGTGACGATGTTACT+CGG | 0.531017 | 1.2:+55557537 | MS.gene32081:CDS |
TCAACTCTATGTACCAAACT+TGG | 0.533287 | 1.2:-55558418 | None:intergenic |
GTTGCTATTGGAGGAACTGT+AGG | 0.533303 | 1.2:+55557368 | MS.gene32081:CDS |
GAACGTACGCGTGGAATGAA+GGG | 0.534286 | 1.2:+55558194 | MS.gene32081:CDS |
TCCTCCTACTCCTATAGAGG+TGG | 0.534360 | 1.2:+55557001 | MS.gene32081:CDS |
TTATTTAAGCTTGTTTCTGA+GGG | 0.535145 | 1.2:-55559666 | None:intergenic |
TGAAGCAACTTCGAAAACAT+TGG | 0.535299 | 1.2:+55557463 | MS.gene32081:CDS |
TTGCATAAAGATGGTGTTTG+TGG | 0.535887 | 1.2:+55557281 | MS.gene32081:CDS |
TTTACTTCAGTGGGTAGCAC+AGG | 0.536694 | 1.2:+55559224 | MS.gene32081:CDS |
CAAGCGTAAACATAATCTAA+AGG | 0.537630 | 1.2:+55558759 | MS.gene32081:CDS |
TGATGATTCACAGGAAGAGA+AGG | 0.537658 | 1.2:+55557760 | MS.gene32081:CDS |
GAGTCAGATGAAGGGAAAGT+TGG | 0.538889 | 1.2:+55557881 | MS.gene32081:CDS |
GGTGGAGGGATCTATGGTTA+GGG | 0.541957 | 1.2:+55557019 | MS.gene32081:CDS |
TGAGAAGGACTTGGTAGTTG+GGG | 0.543115 | 1.2:+55557049 | MS.gene32081:CDS |
TGAGCAGAAGAAGAAGGAGG+AGG | 0.543585 | 1.2:+55557487 | MS.gene32081:CDS |
CACTCGGTGAGTAGTTAAGC+TGG | 0.544989 | 1.2:-55559845 | None:intergenic |
TCAGGGAAAAGTCGTAGAGA+AGG | 0.545278 | 1.2:+55558025 | MS.gene32081:CDS |
GAGGGATCAAATATCTGTCC+TGG | 0.546699 | 1.2:-55558103 | None:intergenic |
TCCTCAAAATTAGGGGAGAA+GGG | 0.547058 | 1.2:-55559141 | None:intergenic |
GTATGTAAGATTTCTTTCCC+AGG | 0.549497 | 1.2:-55559330 | None:intergenic |
CGATGTTACTCGGGTTGAGT+CGG | 0.551257 | 1.2:+55557547 | MS.gene32081:CDS |
GGATGATACTGAGAAGGACT+TGG | 0.552752 | 1.2:+55557040 | MS.gene32081:CDS |
TGCCTGCGCAGATGCATCCG+AGG | 0.553341 | 1.2:-55558122 | None:intergenic |
TTGCTATTGGAGGAACTGTA+GGG | 0.554114 | 1.2:+55557369 | MS.gene32081:CDS |
GCTTGTTAGAACCAGCCAAT+GGG | 0.554154 | 1.2:+55558806 | MS.gene32081:CDS |
TCTAGAGATGAAAACTCTGT+AGG | 0.554887 | 1.2:-55559189 | None:intergenic |
TTCCAATGTTGAACTTAATG+TGG | 0.555710 | 1.2:+55559926 | MS.gene32081:CDS |
GGGTTGCTAGCCAACTTACT+GGG | 0.555983 | 1.2:+55559034 | MS.gene32081:CDS |
AAATTGGCGATTGTATCCGT+AGG | 0.556953 | 1.2:+55559013 | MS.gene32081:CDS |
TCTGAGACAGAAATTGATAG+AGG | 0.558240 | 1.2:+55559720 | MS.gene32081:CDS |
GAACAGGTAAAAGCATCAGC+TGG | 0.558343 | 1.2:+55557815 | MS.gene32081:CDS |
TCGTTTCTTGGAAAGGATAG+GGG | 0.562588 | 1.2:-55558890 | None:intergenic |
CCAGAATATTTCAACATAGA+GGG | 0.564536 | 1.2:-55559060 | None:intergenic |
GTTACTCGGGTTGAGTCGGA+TGG | 0.565075 | 1.2:+55557551 | MS.gene32081:CDS |
AAGACGGGTCGAATTTGGGC+TGG | 0.565195 | 1.2:+55558318 | MS.gene32081:CDS |
AATAAGGTAGTTGAGTTGGG+TGG | 0.565583 | 1.2:+55557437 | MS.gene32081:CDS |
GAATGATCTGGTTTGGGGCA+AGG | 0.565852 | 1.2:+55558060 | MS.gene32081:CDS |
GCTGACGTCCCAAGGGTGAA+AGG | 0.569331 | 1.2:+55558934 | MS.gene32081:CDS |
TTTCAGGAATTCAATCATTG+TGG | 0.569656 | 1.2:+55559299 | MS.gene32081:CDS |
TAGAGGGCGACCCAGTAAGT+TGG | 0.571586 | 1.2:-55559044 | None:intergenic |
GTGGGTAGCACAGGAACCAA+AGG | 0.573631 | 1.2:+55559233 | MS.gene32081:CDS |
CTTCAGGTTGTTGAAAACTG+TGG | 0.573927 | 1.2:+55558382 | MS.gene32081:CDS |
TCCCTCGGATGCATCTGCGC+AGG | 0.575454 | 1.2:+55558120 | MS.gene32081:CDS |
ATTGGATGAGCAGAAGAAGA+AGG | 0.575488 | 1.2:+55557481 | MS.gene32081:CDS |
TGTTTCAGGAGATTCACCTA+TGG | 0.576258 | 1.2:-55559382 | None:intergenic |
GAACAGGTAAAAGCATCAGA+TGG | 0.576894 | 1.2:+55557971 | MS.gene32081:CDS |
TTCTGGAGACACTTCTCTGA+TGG | 0.577268 | 1.2:+55559077 | MS.gene32081:CDS |
AAAAGCATCAGATGCAAAAG+TGG | 0.577403 | 1.2:+55557664 | MS.gene32081:CDS |
TCATTGTGGCCAGTGATCCT+GGG | 0.577427 | 1.2:+55559313 | MS.gene32081:CDS |
GATGTGAATGTTGCTATTGG+AGG | 0.577509 | 1.2:+55557359 | MS.gene32081:CDS |
AATTGGCGATTGTATCCGTA+GGG | 0.579455 | 1.2:+55559014 | MS.gene32081:CDS |
AATCGATCAAAGCCTCCAGT+TGG | 0.585502 | 1.2:-55558511 | None:intergenic |
ACCTCTATAGGAGTAGGAGG+AGG | 0.586284 | 1.2:-55556999 | None:intergenic |
TTACTATTGGAGGAGTTGAA+GGG | 0.588873 | 1.2:+55557174 | MS.gene32081:CDS |
CTTTGGATGAAGTCAAAAGA+CGG | 0.588987 | 1.2:+55558302 | MS.gene32081:CDS |
CTCGGGTTGAGTCGGATGGA+GGG | 0.591613 | 1.2:+55557555 | MS.gene32081:CDS |
AGCTTGTTAGAACCAGCCAA+TGG | 0.592127 | 1.2:+55558805 | MS.gene32081:CDS |
TGATGATTCAGACAAAGAGA+AGG | 0.592792 | 1.2:+55557601 | MS.gene32081:CDS |
GATTGATTCAGACAAAGAGA+AGG | 0.593485 | 1.2:+55557916 | MS.gene32081:CDS |
ACTCGGGTTGAGTCGGATGG+AGG | 0.594408 | 1.2:+55557554 | MS.gene32081:CDS |
CCCGAATTACAATATTGTGG+AGG | 0.595704 | 1.2:+55558598 | MS.gene32081:CDS |
CAGGGAAAAGTCGTAGAGAA+GGG | 0.596276 | 1.2:+55558026 | MS.gene32081:CDS |
TGCTGAGCTGAATCATGATG+TGG | 0.597423 | 1.2:+55557112 | MS.gene32081:CDS |
TTTGGATGAAGTCAAAAGAC+GGG | 0.598056 | 1.2:+55558303 | MS.gene32081:CDS |
GGTAGAATCTGGATTCCCAT+TGG | 0.599521 | 1.2:-55558821 | None:intergenic |
AATAAGTGACGATGTTACTC+GGG | 0.599832 | 1.2:+55557538 | MS.gene32081:CDS |
GACACTTCTCTGATGGCAGA+TGG | 0.600480 | 1.2:+55559084 | MS.gene32081:CDS |
TGGGTAGCACAGGAACCAAA+GGG | 0.603458 | 1.2:+55559234 | MS.gene32081:CDS |
GGTTAGGGATGATACTGAGA+AGG | 0.604612 | 1.2:+55557034 | MS.gene32081:CDS |
CCCTCCACCTCTATAGGAGT+AGG | 0.609579 | 1.2:-55557005 | None:intergenic |
AAGGAGGTAGTTGAGTTGGG+TGG | 0.611624 | 1.2:+55557242 | MS.gene32081:CDS |
TCCACCTCTATAGGAGTAGG+AGG | 0.611867 | 1.2:-55557002 | None:intergenic |
CTATTTGGTAGCATATTATG+GGG | 0.612060 | 1.2:+55558168 | MS.gene32081:CDS |
AATTGATAGAGGAAGCAAGC+GGG | 0.613209 | 1.2:+55559731 | MS.gene32081:CDS |
ATCATTCGGATAATCACTGT+GGG | 0.613540 | 1.2:-55558842 | None:intergenic |
GCAAGGTGAGAAGCCATCCA+TGG | 0.614983 | 1.2:+55558077 | MS.gene32081:CDS |
TTGCCCGAATTACAATATTG+TGG | 0.615408 | 1.2:+55558595 | MS.gene32081:CDS |
GACACATGTTGCATGCAGAA+TGG | 0.617411 | 1.2:+55559426 | MS.gene32081:CDS |
GGTTCAAGAGGATAAAGATG+TGG | 0.618010 | 1.2:+55557148 | MS.gene32081:CDS |
GATTATGTTTACGCTTGCGA+CGG | 0.620559 | 1.2:-55558753 | None:intergenic |
AAAAGGAAGAAACCAGCCAT+AGG | 0.628089 | 1.2:+55559366 | MS.gene32081:CDS |
GTTCAAGAGGATAAAGATGT+GGG | 0.628591 | 1.2:+55557149 | MS.gene32081:CDS |
AAGCTTCTCAGGTGAAAAGG+AGG | 0.628731 | 1.2:-55558458 | None:intergenic |
GCCTGCGCAGATGCATCCGA+GGG | 0.630249 | 1.2:-55558121 | None:intergenic |
TTCAGGTTGAGTCAGATGAA+GGG | 0.631536 | 1.2:+55557873 | MS.gene32081:CDS |
TAAGTTGGCTAGCAACCCTA+CGG | 0.637189 | 1.2:-55559029 | None:intergenic |
GTTCAAAACAAGTTCAGCAG+GGG | 0.637786 | 1.2:-55559622 | None:intergenic |
TCAGTACGCTGACGTCCCAA+GGG | 0.638239 | 1.2:+55558927 | MS.gene32081:CDS |
TTCGGGTTGAGTCAGATGAA+GGG | 0.639871 | 1.2:+55557714 | MS.gene32081:CDS |
TCTGTGAATGATCTGGTTTG+GGG | 0.640253 | 1.2:+55558055 | MS.gene32081:CDS |
CTGAGTCTCCTCAAAATTAG+GGG | 0.644036 | 1.2:-55559148 | None:intergenic |
AATATCTGTCCTGGCCACCA+TGG | 0.644606 | 1.2:-55558094 | None:intergenic |
ATTGGAGCTTACAACAGCGA+AGG | 0.645925 | 1.2:+55558531 | MS.gene32081:CDS |
TGATTATCCGAATGATGATG+AGG | 0.647957 | 1.2:+55558849 | MS.gene32081:CDS |
AGTTCAAAACAAGTTCAGCA+GGG | 0.652707 | 1.2:-55559623 | None:intergenic |
GAAGCTTTCAACAATGCACT+CGG | 0.655548 | 1.2:-55559861 | None:intergenic |
ATGGGGATGGAACGTACGCG+TGG | 0.660026 | 1.2:+55558185 | MS.gene32081:CDS |
CATCATTCGGATAATCACTG+TGG | 0.677313 | 1.2:-55558843 | None:intergenic |
AAGCAGAATCTACAGCACTC+CGG | 0.679557 | 1.2:-55558282 | None:intergenic |
CCTACTCCTATAGAGGTGGA+GGG | 0.680730 | 1.2:+55557005 | MS.gene32081:CDS |
GTTGAGCTGAATAACGATGT+GGG | 0.684140 | 1.2:+55557308 | MS.gene32081:CDS |
GGATGAGCAGAAGAAGAAGG+AGG | 0.687283 | 1.2:+55557484 | MS.gene32081:CDS |
AGGTGAGAAGCCATCCATGG+TGG | 0.691278 | 1.2:+55558080 | MS.gene32081:CDS |
TGTTGAGCTGAATAACGATG+TGG | 0.694789 | 1.2:+55557307 | MS.gene32081:CDS |
GCTGAGCTGAATCATGATGT+GGG | 0.707525 | 1.2:+55557113 | MS.gene32081:CDS |
CTGTTCATGTTTATACACGT+AGG | 0.716902 | 1.2:+55559520 | MS.gene32081:CDS |
AAATTGATAGAGGAAGCAAG+CGG | 0.720495 | 1.2:+55559730 | MS.gene32081:CDS |
ATGCAATTCCTGGTCCTGTG+TGG | 0.729902 | 1.2:-55559895 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATCAGTATCATTAATTA+AGG | - | chr1.2:55558644-55558663 | None:intergenic | 15.0% |
!!! | AATAACATTTTTAAGCATTT+TGG | + | chr1.2:55559684-55559703 | MS.gene32081:CDS | 15.0% |
!!! | AATTTTAAATGATTGTTTTG+TGG | - | chr1.2:55558998-55559017 | None:intergenic | 15.0% |
!!! | ACAAAACAATCATTTAAAAT+TGG | + | chr1.2:55558997-55559016 | MS.gene32081:CDS | 15.0% |
!! | ACAATTCATACAAGTAAAAA+TGG | + | chr1.2:55558688-55558707 | MS.gene32081:CDS | 20.0% |
!! | ATAGTTTCTTGAATGTTATA+GGG | + | chr1.2:55559262-55559281 | MS.gene32081:CDS | 20.0% |
!! | TATAGTTTCTTGAATGTTAT+AGG | + | chr1.2:55559261-55559280 | MS.gene32081:CDS | 20.0% |
!! | TATTGAAAAGCAGAAAAATT+TGG | + | chr1.2:55558252-55558271 | MS.gene32081:CDS | 20.0% |
! | ATCTTGTCATAAGTATCTTT+AGG | - | chr1.2:55558358-55558377 | None:intergenic | 25.0% |
! | GAAATCTTACATACAAAAGT+TGG | + | chr1.2:55559339-55559358 | MS.gene32081:CDS | 25.0% |
! | TTATGACAAGATTAAACTTC+AGG | + | chr1.2:55558366-55558385 | MS.gene32081:CDS | 25.0% |
!!! | TTATTTAAGCTTGTTTCTGA+GGG | - | chr1.2:55559669-55559688 | None:intergenic | 25.0% |
!!! | TTTTAGAAAGAACTGCTATT+TGG | + | chr1.2:55558153-55558172 | MS.gene32081:CDS | 25.0% |
AAAGATGTGAATGTTGCTAT+TGG | + | chr1.2:55557356-55557375 | MS.gene32081:CDS | 30.0% | |
AAGAAACTATAATCTCCCTT+TGG | - | chr1.2:55559252-55559271 | None:intergenic | 30.0% | |
ACCTCCACAATATTGTAATT+CGG | - | chr1.2:55558602-55558621 | None:intergenic | 30.0% | |
AGTAAAAATGGTGATCAAAC+TGG | + | chr1.2:55558700-55558719 | MS.gene32081:CDS | 30.0% | |
ATAAGAGAAATGTGACCTAA+AGG | - | chr1.2:55558233-55558252 | None:intergenic | 30.0% | |
ATAAGTATCTTTAGGTATGC+AGG | - | chr1.2:55558350-55558369 | None:intergenic | 30.0% | |
ATACAAAAGTTGGCACTAAA+AGG | + | chr1.2:55559349-55559368 | MS.gene32081:CDS | 30.0% | |
ATTACAATATTGTGGAGGTT+TGG | + | chr1.2:55558603-55558622 | MS.gene32081:CDS | 30.0% | |
CAAGCGTAAACATAATCTAA+AGG | + | chr1.2:55558759-55558778 | MS.gene32081:CDS | 30.0% | |
CCAGAATATTTCAACATAGA+GGG | - | chr1.2:55559063-55559082 | None:intergenic | 30.0% | |
CGTAAACATAATCTAAAGGT+TGG | + | chr1.2:55558763-55558782 | MS.gene32081:CDS | 30.0% | |
GCTAAACAGTTCAACATATT+TGG | + | chr1.2:55559804-55559823 | MS.gene32081:CDS | 30.0% | |
TAAGAGAAATGTGACCTAAA+GGG | - | chr1.2:55558232-55558251 | None:intergenic | 30.0% | |
TAATAAGTGACGATGTTACT+CGG | + | chr1.2:55557537-55557556 | MS.gene32081:CDS | 30.0% | |
TCATCAAAGTCAAATGTTTC+AGG | - | chr1.2:55559399-55559418 | None:intergenic | 30.0% | |
TCCAGAATATTTCAACATAG+AGG | - | chr1.2:55559064-55559083 | None:intergenic | 30.0% | |
TTCCAATGTTGAACTTAATG+TGG | + | chr1.2:55559926-55559945 | MS.gene32081:CDS | 30.0% | |
TTTCAGGAATTCAATCATTG+TGG | + | chr1.2:55559299-55559318 | MS.gene32081:CDS | 30.0% | |
! | AACATTTGACTTTGATGATC+TGG | + | chr1.2:55559401-55559420 | MS.gene32081:CDS | 30.0% |
! | CTATTTGGTAGCATATTATG+GGG | + | chr1.2:55558168-55558187 | MS.gene32081:CDS | 30.0% |
! | GCTATTTGGTAGCATATTAT+GGG | + | chr1.2:55558167-55558186 | MS.gene32081:CDS | 30.0% |
! | TAAACATGAACAGGTTTTTC+TGG | - | chr1.2:55559513-55559532 | None:intergenic | 30.0% |
! | TAAGCATTTTGGACCTTTAA+AGG | + | chr1.2:55559695-55559714 | MS.gene32081:CDS | 30.0% |
! | TGATGAGTGATGATGTTATT+CGG | + | chr1.2:55557696-55557715 | MS.gene32081:CDS | 30.0% |
! | TGCTATTTGGTAGCATATTA+TGG | + | chr1.2:55558166-55558185 | MS.gene32081:CDS | 30.0% |
! | TTGAAGATTCTCAAGTTGTT+GGG | + | chr1.2:55557393-55557412 | MS.gene32081:CDS | 30.0% |
! | TTTGAAGATTCTCAAGTTGT+TGG | + | chr1.2:55557392-55557411 | MS.gene32081:CDS | 30.0% |
! | TTTGCTATCTTTACTTCAGT+GGG | + | chr1.2:55559215-55559234 | MS.gene32081:CDS | 30.0% |
!! | AGAAAAATTTGGAAGTGTTC+CGG | + | chr1.2:55558263-55558282 | MS.gene32081:CDS | 30.0% |
!! | ATTTGCTATCTTTACTTCAG+TGG | + | chr1.2:55559214-55559233 | MS.gene32081:CDS | 30.0% |
!! | GTTATTTAAGCTTGTTTCTG+AGG | - | chr1.2:55559670-55559689 | None:intergenic | 30.0% |
AAAATACTGTTTCCTGGAAC+AGG | - | chr1.2:55559547-55559566 | None:intergenic | 35.0% | |
AAAGATGTGGGTCTTACTAT+TGG | + | chr1.2:55557161-55557180 | MS.gene32081:CDS | 35.0% | |
AAATTGATAGAGGAAGCAAG+CGG | + | chr1.2:55559730-55559749 | MS.gene32081:CDS | 35.0% | |
AAGTATTCCATAAGCTTCTC+AGG | - | chr1.2:55558472-55558491 | None:intergenic | 35.0% | |
AAGTTCAAAACAAGTTCAGC+AGG | - | chr1.2:55559627-55559646 | None:intergenic | 35.0% | |
AATAAGTGACGATGTTACTC+GGG | + | chr1.2:55557538-55557557 | MS.gene32081:CDS | 35.0% | |
AATGATCAAGATGCAATTCC+TGG | - | chr1.2:55559908-55559927 | None:intergenic | 35.0% | |
AGCAATAGTCTTTCGTTTCT+TGG | - | chr1.2:55558905-55558924 | None:intergenic | 35.0% | |
AGGGGAAAAAAGATTAGCAA+TGG | - | chr1.2:55558875-55558894 | None:intergenic | 35.0% | |
AGTTCAAAACAAGTTCAGCA+GGG | - | chr1.2:55559626-55559645 | None:intergenic | 35.0% | |
ATCATTCGGATAATCACTGT+GGG | - | chr1.2:55558845-55558864 | None:intergenic | 35.0% | |
ATTTAATGATGCCGAAGAAC+AGG | + | chr1.2:55557955-55557974 | MS.gene32081:CDS | 35.0% | |
CCCTCTATGTTGAAATATTC+TGG | + | chr1.2:55559060-55559079 | MS.gene32081:CDS | 35.0% | |
CCTCCACAATATTGTAATTC+GGG | - | chr1.2:55558601-55558620 | None:intergenic | 35.0% | |
CTACGTGTATAAACATGAAC+AGG | - | chr1.2:55559522-55559541 | None:intergenic | 35.0% | |
CTGTTCATGTTTATACACGT+AGG | + | chr1.2:55559520-55559539 | MS.gene32081:CDS | 35.0% | |
CTTTGGATGAAGTCAAAAGA+CGG | + | chr1.2:55558302-55558321 | MS.gene32081:CDS | 35.0% | |
GAAGCAACTTTGCATAAAGA+TGG | + | chr1.2:55557272-55557291 | MS.gene32081:CDS | 35.0% | |
GACCACATTAAGTTCAACAT+TGG | - | chr1.2:55559931-55559950 | None:intergenic | 35.0% | |
GAGAATAAGGTAGTTGAGTT+GGG | + | chr1.2:55557434-55557453 | MS.gene32081:CDS | 35.0% | |
GTATGTAAGATTTCTTTCCC+AGG | - | chr1.2:55559333-55559352 | None:intergenic | 35.0% | |
GTTCAAGAGGATAAAGATGT+GGG | + | chr1.2:55557149-55557168 | MS.gene32081:CDS | 35.0% | |
TAGTCTTTCGTTTCTTGGAA+AGG | - | chr1.2:55558900-55558919 | None:intergenic | 35.0% | |
TCAACTCTATGTACCAAACT+TGG | - | chr1.2:55558421-55558440 | None:intergenic | 35.0% | |
TCAGACAAAGAGAAGGAAAT+CGG | + | chr1.2:55557608-55557627 | MS.gene32081:CDS | 35.0% | |
TCAGACAAAGAGAAGGAAAT+TGG | + | chr1.2:55557608-55557627 | MS.gene32081:CDS | 35.0% | |
TCTAGAGATGAAAACTCTGT+AGG | - | chr1.2:55559192-55559211 | None:intergenic | 35.0% | |
TCTGAGTCTCCTCAAAATTA+GGG | - | chr1.2:55559152-55559171 | None:intergenic | 35.0% | |
TCTGTCTCAGATTCCTTTAA+AGG | - | chr1.2:55559711-55559730 | None:intergenic | 35.0% | |
TGAAGCAACTTCGAAAACAT+TGG | + | chr1.2:55557463-55557482 | MS.gene32081:CDS | 35.0% | |
TGATGATTCAGACAAAGAGA+AGG | + | chr1.2:55557601-55557620 | MS.gene32081:CDS | 35.0% | |
TTACTATTGGAGGAGTTGAA+GGG | + | chr1.2:55557174-55557193 | MS.gene32081:CDS | 35.0% | |
TTCGTTTCTTGGAAAGGATA+GGG | - | chr1.2:55558894-55558913 | None:intergenic | 35.0% | |
TTCTCATCTATATAACCAGC+AGG | - | chr1.2:55559600-55559619 | None:intergenic | 35.0% | |
TTCTGAGTCTCCTCAAAATT+AGG | - | chr1.2:55559153-55559172 | None:intergenic | 35.0% | |
TTGCATAAAGATGGTGTTTG+TGG | + | chr1.2:55557281-55557300 | MS.gene32081:CDS | 35.0% | |
TTGCCCGAATTACAATATTG+TGG | + | chr1.2:55558595-55558614 | MS.gene32081:CDS | 35.0% | |
TTTCGTTTCTTGGAAAGGAT+AGG | - | chr1.2:55558895-55558914 | None:intergenic | 35.0% | |
TTTCTGTGAATGATCTGGTT+TGG | + | chr1.2:55558053-55558072 | MS.gene32081:CDS | 35.0% | |
TTTGGATGAAGTCAAAAGAC+GGG | + | chr1.2:55558303-55558322 | MS.gene32081:CDS | 35.0% | |
! | ATATAACCAGCAGGTTTTTC+AGG | - | chr1.2:55559591-55559610 | None:intergenic | 35.0% |
! | GAAGTTTTCTGTGAATGATC+TGG | + | chr1.2:55558048-55558067 | MS.gene32081:CDS | 35.0% |
! | GATGACTGATGATGTTATTC+AGG | + | chr1.2:55557856-55557875 | MS.gene32081:CDS | 35.0% |
! | GATGAGTGATGATGTTATTC+GGG | + | chr1.2:55557697-55557716 | MS.gene32081:CDS | 35.0% |
! | GATTCTGATTTGTGCATACA+AGG | + | chr1.2:55557077-55557096 | MS.gene32081:CDS | 35.0% |
! | GATTGATTCAGACAAAGAGA+AGG | + | chr1.2:55557916-55557935 | MS.gene32081:CDS | 35.0% |
! | GCTTTATCCAATTTTCCAAC+TGG | + | chr1.2:55558496-55558515 | MS.gene32081:CDS | 35.0% |
! | GGAGACAAAGAAGTTTTTGA+TGG | + | chr1.2:55557629-55557648 | MS.gene32081:CDS | 35.0% |
! | TCTGAGACAGAAATTGATAG+AGG | + | chr1.2:55559720-55559739 | MS.gene32081:CDS | 35.0% |
! | TGAGAAGATTGATGATTCAC+AGG | + | chr1.2:55557751-55557770 | MS.gene32081:CDS | 35.0% |
! | TGATGCTTTTACCTGTTCAT+CGG | - | chr1.2:55557813-55557832 | None:intergenic | 35.0% |
! | TGATGCTTTTACCTGTTCTT+CGG | - | chr1.2:55557969-55557988 | None:intergenic | 35.0% |
! | TGATTATCCGAATGATGATG+AGG | + | chr1.2:55558849-55558868 | MS.gene32081:CDS | 35.0% |
! | TGTTCCAGGAAACAGTATTT+TGG | + | chr1.2:55559546-55559565 | MS.gene32081:CDS | 35.0% |
! | TTATCCAATTTTCCAACTGG+AGG | + | chr1.2:55558499-55558518 | MS.gene32081:CDS | 35.0% |
! | TTCTGTGAATGATCTGGTTT+GGG | + | chr1.2:55558054-55558073 | MS.gene32081:CDS | 35.0% |
!! | AAAAGCATCAGATGCAAAAG+TGG | + | chr1.2:55557664-55557683 | MS.gene32081:CDS | 35.0% |
!! | AATAACGATGTGGGTTTTGA+TGG | + | chr1.2:55557317-55557336 | MS.gene32081:CDS | 35.0% |
!! | AATCATGATGTGGGTTTTGA+TGG | + | chr1.2:55557122-55557141 | MS.gene32081:CDS | 35.0% |
!! | ATAACGATGTGGGTTTTGAT+GGG | + | chr1.2:55557318-55557337 | MS.gene32081:CDS | 35.0% |
!! | ATCATGATGTGGGTTTTGAT+GGG | + | chr1.2:55557123-55557142 | MS.gene32081:CDS | 35.0% |
!! | TGTTTTGAACTTTGCTGACT+TGG | + | chr1.2:55559635-55559654 | MS.gene32081:CDS | 35.0% |
!! | TTCAGGTTGTTGAAAACTGT+GGG | + | chr1.2:55558383-55558402 | MS.gene32081:CDS | 35.0% |
!! | TTTTGAAGGTAAGAGTGAGA+AGG | + | chr1.2:55557223-55557242 | MS.gene32081:CDS | 35.0% |
AAAAGGAAGAAACCAGCCAT+AGG | + | chr1.2:55559366-55559385 | MS.gene32081:CDS | 40.0% | |
AAAGCCTCCAGTTGGAAAAT+TGG | - | chr1.2:55558506-55558525 | None:intergenic | 40.0% | |
AAATTGGCGATTGTATCCGT+AGG | + | chr1.2:55559013-55559032 | MS.gene32081:CDS | 40.0% | |
AATGGTGATCAAACTGGAAC+CGG | + | chr1.2:55558706-55558725 | MS.gene32081:CDS | 40.0% | |
AATTGATAGAGGAAGCAAGC+GGG | + | chr1.2:55559731-55559750 | MS.gene32081:CDS | 40.0% | |
AATTGGCGATTGTATCCGTA+GGG | + | chr1.2:55559014-55559033 | MS.gene32081:CDS | 40.0% | |
AGAAGGTAAGAGCGAGAATA+AGG | + | chr1.2:55557421-55557440 | MS.gene32081:CDS | 40.0% | |
AGCAAGAGTAACCCTTTAAC+CGG | - | chr1.2:55558576-55558595 | None:intergenic | 40.0% | |
AGGACAGATATTTGATCCCT+CGG | + | chr1.2:55558105-55558124 | MS.gene32081:CDS | 40.0% | |
AGTTAATGACACCGATGAAC+AGG | + | chr1.2:55557799-55557818 | MS.gene32081:CDS | 40.0% | |
ATTATGTTTACGCTTGCGAC+GGG | - | chr1.2:55558755-55558774 | None:intergenic | 40.0% | |
ATTGGATGAGCAGAAGAAGA+AGG | + | chr1.2:55557481-55557500 | MS.gene32081:CDS | 40.0% | |
CAAGTTGTTGGGTCATTAGA+AGG | + | chr1.2:55557404-55557423 | MS.gene32081:CDS | 40.0% | |
CATAAGCTTCTCAGGTGAAA+AGG | - | chr1.2:55558464-55558483 | None:intergenic | 40.0% | |
CATCATTCGGATAATCACTG+TGG | - | chr1.2:55558846-55558865 | None:intergenic | 40.0% | |
CCCGAATTACAATATTGTGG+AGG | + | chr1.2:55558598-55558617 | MS.gene32081:CDS | 40.0% | |
CGAGAATAAGGTAGTTGAGT+TGG | + | chr1.2:55557433-55557452 | MS.gene32081:CDS | 40.0% | |
CTGAGTCTCCTCAAAATTAG+GGG | - | chr1.2:55559151-55559170 | None:intergenic | 40.0% | |
CTTACTATTGGAGGAGTTGA+AGG | + | chr1.2:55557173-55557192 | MS.gene32081:CDS | 40.0% | |
GAAGCTTTCAACAATGCACT+CGG | - | chr1.2:55559864-55559883 | None:intergenic | 40.0% | |
GATTATGTTTACGCTTGCGA+CGG | - | chr1.2:55558756-55558775 | None:intergenic | 40.0% | |
GCTACCAAAATACTGTTTCC+TGG | - | chr1.2:55559553-55559572 | None:intergenic | 40.0% | |
GGAGGAGGTAGATGAAATAT+TGG | + | chr1.2:55557505-55557524 | MS.gene32081:CDS | 40.0% | |
GGAGTTTCTTCTCTGATTTC+AGG | + | chr1.2:55559283-55559302 | MS.gene32081:CDS | 40.0% | |
GGTTCAAGAGGATAAAGATG+TGG | + | chr1.2:55557148-55557167 | MS.gene32081:CDS | 40.0% | |
GTTCAAAACAAGTTCAGCAG+GGG | - | chr1.2:55559625-55559644 | None:intergenic | 40.0% | |
GTTGAGCTGAATAACGATGT+GGG | + | chr1.2:55557308-55557327 | MS.gene32081:CDS | 40.0% | |
TAATCACTGTGGGTAGAATC+TGG | - | chr1.2:55558835-55558854 | None:intergenic | 40.0% | |
TCAAAAGACGGGTCGAATTT+GGG | + | chr1.2:55558314-55558333 | MS.gene32081:CDS | 40.0% | |
TCACAGGAAGAGAAGGAAAT+TGG | + | chr1.2:55557767-55557786 | MS.gene32081:CDS | 40.0% | |
TCCTCAAAATTAGGGGAGAA+GGG | - | chr1.2:55559144-55559163 | None:intergenic | 40.0% | |
TCGTTTCTTGGAAAGGATAG+GGG | - | chr1.2:55558893-55558912 | None:intergenic | 40.0% | |
TGATGATTCACAGGAAGAGA+AGG | + | chr1.2:55557760-55557779 | MS.gene32081:CDS | 40.0% | |
TGTTGAGCTGAATAACGATG+TGG | + | chr1.2:55557307-55557326 | MS.gene32081:CDS | 40.0% | |
TGTTTCAGGAGATTCACCTA+TGG | - | chr1.2:55559385-55559404 | None:intergenic | 40.0% | |
! | ACTTTTCCCTGAACTCTTCA+TGG | - | chr1.2:55558017-55558036 | None:intergenic | 40.0% |
! | CTTGCATTCTACCGGTTAAA+GGG | + | chr1.2:55558562-55558581 | MS.gene32081:CDS | 40.0% |
! | CTTTTCACCTGAGAAGCTTA+TGG | + | chr1.2:55558462-55558481 | MS.gene32081:CDS | 40.0% |
! | CTTTTCCCTGAACTCTTCAT+GGG | - | chr1.2:55558016-55558035 | None:intergenic | 40.0% |
! | GATGTGAATGTTGCTATTGG+AGG | + | chr1.2:55557359-55557378 | MS.gene32081:CDS | 40.0% |
! | GGTGCTTGAACTTTTCTCAA+GGG | - | chr1.2:55558977-55558996 | None:intergenic | 40.0% |
! | GTTTGTGGCTTTTGAATCTC+CGG | - | chr1.2:55558728-55558747 | None:intergenic | 40.0% |
! | TCTGTGAATGATCTGGTTTG+GGG | + | chr1.2:55558055-55558074 | MS.gene32081:CDS | 40.0% |
! | TGGTGCTTGAACTTTTCTCA+AGG | - | chr1.2:55558978-55558997 | None:intergenic | 40.0% |
! | TTCATCTTTTGCTACCACAC+AGG | + | chr1.2:55559881-55559900 | MS.gene32081:CDS | 40.0% |
! | TTGCTATTGGAGGAACTGTA+GGG | + | chr1.2:55557369-55557388 | MS.gene32081:CDS | 40.0% |
! | TTGGTAGCATATTATGGGGA+TGG | + | chr1.2:55558172-55558191 | MS.gene32081:CDS | 40.0% |
! | TTTTCCCTGAACTCTTCATG+GGG | - | chr1.2:55558015-55558034 | None:intergenic | 40.0% |
!! | AATAAGGTAGTTGAGTTGGG+TGG | + | chr1.2:55557437-55557456 | MS.gene32081:CDS | 40.0% |
!! | ATAAGGTAGTTGAGTTGGGT+GGG | + | chr1.2:55557438-55557457 | MS.gene32081:CDS | 40.0% |
!! | ATTCAGGTTGAGTCAGATGA+AGG | + | chr1.2:55557872-55557891 | MS.gene32081:CDS | 40.0% |
!! | CTTCAGGTTGTTGAAAACTG+TGG | + | chr1.2:55558382-55558401 | MS.gene32081:CDS | 40.0% |
!! | GAACAGGTAAAAGCATCAGA+TGG | + | chr1.2:55557971-55557990 | MS.gene32081:CDS | 40.0% |
!! | TTCAGGTTGAGTCAGATGAA+GGG | + | chr1.2:55557873-55557892 | MS.gene32081:CDS | 40.0% |
!! | TTTTGGTAGCAATCACACTG+AGG | + | chr1.2:55559563-55559582 | MS.gene32081:CDS | 40.0% |
!!! | AGTTTTTGATGGCGAAGAAC+AGG | + | chr1.2:55557640-55557659 | MS.gene32081:CDS | 40.0% |
AAGCAGAATCTACAGCACTC+CGG | - | chr1.2:55558285-55558304 | None:intergenic | 45.0% | |
AAGCTTCTCAGGTGAAAAGG+AGG | - | chr1.2:55558461-55558480 | None:intergenic | 45.0% | |
AATCGATCAAAGCCTCCAGT+TGG | - | chr1.2:55558514-55558533 | None:intergenic | 45.0% | |
ATAGATCCCTCCACCTCTAT+AGG | - | chr1.2:55557014-55557033 | None:intergenic | 45.0% | |
ATGTCCCCATGAAGAGTTCA+GGG | + | chr1.2:55558008-55558027 | MS.gene32081:CDS | 45.0% | |
ATTGGAGCTTACAACAGCGA+AGG | + | chr1.2:55558531-55558550 | MS.gene32081:CDS | 45.0% | |
CAGGGAAAAGTCGTAGAGAA+GGG | + | chr1.2:55558026-55558045 | MS.gene32081:CDS | 45.0% | |
CTCCTCAAAATTAGGGGAGA+AGG | - | chr1.2:55559145-55559164 | None:intergenic | 45.0% | |
GACACATGTTGCATGCAGAA+TGG | + | chr1.2:55559426-55559445 | MS.gene32081:CDS | 45.0% | |
GAGAAGGAGGTAGTTGAGTT+GGG | + | chr1.2:55557239-55557258 | MS.gene32081:CDS | 45.0% | |
GAGGGATCAAATATCTGTCC+TGG | - | chr1.2:55558106-55558125 | None:intergenic | 45.0% | |
GAGTCAGATGAAGGGAAAGT+TGG | + | chr1.2:55557722-55557741 | MS.gene32081:CDS | 45.0% | |
GATGTGGGTCTTACTATTGG+AGG | + | chr1.2:55557164-55557183 | MS.gene32081:CDS | 45.0% | |
GATTCGACAAGAGCCAAGTT+TGG | + | chr1.2:55558405-55558424 | MS.gene32081:CDS | 45.0% | |
GATTTCTTTCCCAGGATCAC+TGG | - | chr1.2:55559325-55559344 | None:intergenic | 45.0% | |
GCAATGGCCTCATCATCATT+CGG | - | chr1.2:55558859-55558878 | None:intergenic | 45.0% | |
GCTGAGCTGAATCATGATGT+GGG | + | chr1.2:55557113-55557132 | MS.gene32081:CDS | 45.0% | |
GGATGATACTGAGAAGGACT+TGG | + | chr1.2:55557040-55557059 | MS.gene32081:CDS | 45.0% | |
GGTAGAATCTGGATTCCCAT+TGG | - | chr1.2:55558824-55558843 | None:intergenic | 45.0% | |
GGTTAGGGATGATACTGAGA+AGG | + | chr1.2:55557034-55557053 | MS.gene32081:CDS | 45.0% | |
GTCAAAAGACGGGTCGAATT+TGG | + | chr1.2:55558313-55558332 | MS.gene32081:CDS | 45.0% | |
TATAGAGGTGGAGGGATCTA+TGG | + | chr1.2:55557013-55557032 | MS.gene32081:CDS | 45.0% | |
TCAGGGAAAAGTCGTAGAGA+AGG | + | chr1.2:55558025-55558044 | MS.gene32081:CDS | 45.0% | |
TCTCTGATGGCAGATGGTAA+TGG | + | chr1.2:55559090-55559109 | MS.gene32081:CDS | 45.0% | |
TGAAGGTAAGAGTGAGAAGG+AGG | + | chr1.2:55557226-55557245 | MS.gene32081:CDS | 45.0% | |
TGAGAAGGAGGTAGTTGAGT+TGG | + | chr1.2:55557238-55557257 | MS.gene32081:CDS | 45.0% | |
TGCTGAGCTGAATCATGATG+TGG | + | chr1.2:55557112-55557131 | MS.gene32081:CDS | 45.0% | |
TTCAGGGTTCTCAAGCTGTT+GGG | + | chr1.2:55557198-55557217 | MS.gene32081:CDS | 45.0% | |
TTCTTCTGCCTTTCACCCTT+GGG | - | chr1.2:55558945-55558964 | None:intergenic | 45.0% | |
TTTACTTCAGTGGGTAGCAC+AGG | + | chr1.2:55559224-55559243 | MS.gene32081:CDS | 45.0% | |
TTTCAGGGTTCTCAAGCTGT+TGG | + | chr1.2:55557197-55557216 | MS.gene32081:CDS | 45.0% | |
TTTCTTCTGCCTTTCACCCT+TGG | - | chr1.2:55558946-55558965 | None:intergenic | 45.0% | |
! | AACTGGAGGCTTTGATCGAT+TGG | + | chr1.2:55558513-55558532 | MS.gene32081:CDS | 45.0% |
! | ACTGAGAAGGACTTGGTAGT+TGG | + | chr1.2:55557047-55557066 | MS.gene32081:CDS | 45.0% |
! | CAAGCTGTTGGGTCTTTTGA+AGG | + | chr1.2:55557209-55557228 | MS.gene32081:CDS | 45.0% |
! | CTGAGAAGGACTTGGTAGTT+GGG | + | chr1.2:55557048-55557067 | MS.gene32081:CDS | 45.0% |
! | GAGTGCTGTAGATTCTGCTT+TGG | + | chr1.2:55558285-55558304 | MS.gene32081:CDS | 45.0% |
! | GCTTGCATTCTACCGGTTAA+AGG | + | chr1.2:55558561-55558580 | MS.gene32081:CDS | 45.0% |
! | GCTTGTTAGAACCAGCCAAT+GGG | + | chr1.2:55558806-55558825 | MS.gene32081:CDS | 45.0% |
! | GTTGCTATTGGAGGAACTGT+AGG | + | chr1.2:55557368-55557387 | MS.gene32081:CDS | 45.0% |
! | TAAGTTGGCTAGCAACCCTA+CGG | - | chr1.2:55559032-55559051 | None:intergenic | 45.0% |
! | TCCCTTCTCCCCTAATTTTG+AGG | + | chr1.2:55559140-55559159 | MS.gene32081:CDS | 45.0% |
! | TGAGAAGGACTTGGTAGTTG+GGG | + | chr1.2:55557049-55557068 | MS.gene32081:CDS | 45.0% |
! | TTCTGGAGACACTTCTCTGA+TGG | + | chr1.2:55559077-55559096 | MS.gene32081:CDS | 45.0% |
! | TTTGATGGGTCAGTTGAGGA+GGG | + | chr1.2:55557332-55557351 | MS.gene32081:CDS | 45.0% |
!! | AGCTTGTTAGAACCAGCCAA+TGG | + | chr1.2:55558805-55558824 | MS.gene32081:CDS | 45.0% |
!! | ATTCGGGTTGAGTCAGATGA+AGG | + | chr1.2:55557713-55557732 | MS.gene32081:CDS | 45.0% |
!! | GAACAGGTAAAAGCATCAGC+TGG | + | chr1.2:55557815-55557834 | MS.gene32081:CDS | 45.0% |
!! | GGAGGGAAAGTTGGTATTTC+TGG | + | chr1.2:55557572-55557591 | MS.gene32081:CDS | 45.0% |
!! | TGATGTGGGTTTTGATGGGT+CGG | + | chr1.2:55557127-55557146 | MS.gene32081:CDS | 45.0% |
!! | TTCGGGTTGAGTCAGATGAA+GGG | + | chr1.2:55557714-55557733 | MS.gene32081:CDS | 45.0% |
!! | TTTTGATGGGTCAGTTGAGG+AGG | + | chr1.2:55557331-55557350 | MS.gene32081:CDS | 45.0% |
!! | TTTTGATGGGTCGGTTCAAG+AGG | + | chr1.2:55557136-55557155 | MS.gene32081:CDS | 45.0% |
!!! | ACAGGTTTTTCTGGCTCAGA+AGG | - | chr1.2:55559504-55559523 | None:intergenic | 45.0% |
!!! | AGGTTTTTCTGGCTCAGAAG+GGG | - | chr1.2:55559502-55559521 | None:intergenic | 45.0% |
!!! | CAGGTTTTTCTGGCTCAGAA+GGG | - | chr1.2:55559503-55559522 | None:intergenic | 45.0% |
AATATCTGTCCTGGCCACCA+TGG | - | chr1.2:55558097-55558116 | None:intergenic | 50.0% | |
ACCTCTATAGGAGTAGGAGG+AGG | - | chr1.2:55557002-55557021 | None:intergenic | 50.0% | |
AGGAGGAGGAGGATTGTCTA+GGG | - | chr1.2:55556988-55557007 | None:intergenic | 50.0% | |
AGGGTTGCTAGCCAACTTAC+TGG | + | chr1.2:55559033-55559052 | MS.gene32081:CDS | 50.0% | |
AGGTGGAGGGATCTATGGTT+AGG | + | chr1.2:55557018-55557037 | MS.gene32081:CDS | 50.0% | |
ATACACGTAGGTCCTGTTCC+AGG | + | chr1.2:55559532-55559551 | MS.gene32081:CDS | 50.0% | |
ATCATTGTGGCCAGTGATCC+TGG | + | chr1.2:55559312-55559331 | MS.gene32081:CDS | 50.0% | |
ATGCAATTCCTGGTCCTGTG+TGG | - | chr1.2:55559898-55559917 | None:intergenic | 50.0% | |
CATGTCCCCATGAAGAGTTC+AGG | + | chr1.2:55558007-55558026 | MS.gene32081:CDS | 50.0% | |
CCTACTCCTATAGAGGTGGA+GGG | + | chr1.2:55557005-55557024 | MS.gene32081:CDS | 50.0% | |
CTCAGCTGCTTGCATTCTAC+CGG | + | chr1.2:55558554-55558573 | MS.gene32081:CDS | 50.0% | |
GAACGTACGCGTGGAATGAA+GGG | + | chr1.2:55558194-55558213 | MS.gene32081:CDS | 50.0% | |
GAATCTGGATTCCCATTGGC+TGG | - | chr1.2:55558820-55558839 | None:intergenic | 50.0% | |
GACACTTCTCTGATGGCAGA+TGG | + | chr1.2:55559084-55559103 | MS.gene32081:CDS | 50.0% | |
GAGGTTCCTGAAAAACCTGC+TGG | + | chr1.2:55559582-55559601 | MS.gene32081:CDS | 50.0% | |
GGAGGAGTTGAAGGGTTTCA+GGG | + | chr1.2:55557182-55557201 | MS.gene32081:CDS | 50.0% | |
GGATGAGCAGAAGAAGAAGG+AGG | + | chr1.2:55557484-55557503 | MS.gene32081:CDS | 50.0% | |
GGGTTGCTAGCCAACTTACT+GGG | + | chr1.2:55559034-55559053 | MS.gene32081:CDS | 50.0% | |
GGTCTAAGCTGAAGCCCTTT+AGG | + | chr1.2:55558215-55558234 | MS.gene32081:CDS | 50.0% | |
GGTGGAGGGATCTATGGTTA+GGG | + | chr1.2:55557019-55557038 | MS.gene32081:CDS | 50.0% | |
TAGGAGGAGGAGGATTGTCT+AGG | - | chr1.2:55556989-55557008 | None:intergenic | 50.0% | |
TCAGGAGATTCACCTATGGC+TGG | - | chr1.2:55559381-55559400 | None:intergenic | 50.0% | |
TCATTGTGGCCAGTGATCCT+GGG | + | chr1.2:55559313-55559332 | MS.gene32081:CDS | 50.0% | |
TCCACCTCTATAGGAGTAGG+AGG | - | chr1.2:55557005-55557024 | None:intergenic | 50.0% | |
TCCTACTCCTATAGAGGTGG+AGG | + | chr1.2:55557004-55557023 | MS.gene32081:CDS | 50.0% | |
TCCTCCTACTCCTATAGAGG+TGG | + | chr1.2:55557001-55557020 | MS.gene32081:CDS | 50.0% | |
TCCTCCTCCTACTCCTATAG+AGG | + | chr1.2:55556998-55557017 | MS.gene32081:CDS | 50.0% | |
TCTATAGGAGTAGGAGGAGG+AGG | - | chr1.2:55556999-55557018 | None:intergenic | 50.0% | |
TGAGCAGAAGAAGAAGGAGG+AGG | + | chr1.2:55557487-55557506 | MS.gene32081:CDS | 50.0% | |
TGGAGGAGTTGAAGGGTTTC+AGG | + | chr1.2:55557181-55557200 | MS.gene32081:CDS | 50.0% | |
TGGGTAGCACAGGAACCAAA+GGG | + | chr1.2:55559234-55559253 | MS.gene32081:CDS | 50.0% | |
! | CACTCGGTGAGTAGTTAAGC+TGG | - | chr1.2:55559848-55559867 | None:intergenic | 50.0% |
! | TTTTGCTACCACACAGGACC+AGG | + | chr1.2:55559887-55559906 | MS.gene32081:CDS | 50.0% |
!! | AAGGAGGTAGTTGAGTTGGG+TGG | + | chr1.2:55557242-55557261 | MS.gene32081:CDS | 50.0% |
!! | CGATGTTACTCGGGTTGAGT+CGG | + | chr1.2:55557547-55557566 | MS.gene32081:CDS | 50.0% |
!! | GAATGATCTGGTTTGGGGCA+AGG | + | chr1.2:55558060-55558079 | MS.gene32081:CDS | 50.0% |
!! | GGACTTGGTAGTTGGGGTTT+TGG | + | chr1.2:55557055-55557074 | MS.gene32081:CDS | 50.0% |
!! | GGGTTTTGATGGGTCAGTTG+AGG | + | chr1.2:55557328-55557347 | MS.gene32081:CDS | 50.0% |
AAGACGGGTCGAATTTGGGC+TGG | + | chr1.2:55558318-55558337 | MS.gene32081:CDS | 55.0% | |
AGGTGAGAAGCCATCCATGG+TGG | + | chr1.2:55558080-55558099 | MS.gene32081:CDS | 55.0% | |
ATCAGTACGCTGACGTCCCA+AGG | + | chr1.2:55558926-55558945 | MS.gene32081:CDS | 55.0% | |
CCCTCCACCTCTATAGGAGT+AGG | - | chr1.2:55557008-55557027 | None:intergenic | 55.0% | |
GAGTCGGATGGAGGGAAAGT+TGG | + | chr1.2:55557563-55557582 | MS.gene32081:CDS | 55.0% | |
GCAAGGTGAGAAGCCATCCA+TGG | + | chr1.2:55558077-55558096 | MS.gene32081:CDS | 55.0% | |
GCAGAAGAAGAAGGAGGAGG+AGG | + | chr1.2:55557490-55557509 | MS.gene32081:CDS | 55.0% | |
GGAACGTACGCGTGGAATGA+AGG | + | chr1.2:55558193-55558212 | MS.gene32081:CDS | 55.0% | |
GTGGGTAGCACAGGAACCAA+AGG | + | chr1.2:55559233-55559252 | MS.gene32081:CDS | 55.0% | |
GTTTACGCTTGCGACGGGAT+TGG | - | chr1.2:55558750-55558769 | None:intergenic | 55.0% | |
TAGAGGGCGACCCAGTAAGT+TGG | - | chr1.2:55559047-55559066 | None:intergenic | 55.0% | |
TCAGTACGCTGACGTCCCAA+GGG | + | chr1.2:55558927-55558946 | MS.gene32081:CDS | 55.0% | |
! | GTCGATGCGCAAGCTGCTTT+CGG | + | chr1.2:55559777-55559796 | MS.gene32081:CDS | 55.0% |
!! | CTTGCGACGGGATTGGTTTG+TGG | - | chr1.2:55558743-55558762 | None:intergenic | 55.0% |
!! | GAGGTAGTTGAGTTGGGTGG+TGG | + | chr1.2:55557245-55557264 | MS.gene32081:CDS | 55.0% |
!! | GTTACTCGGGTTGAGTCGGA+TGG | + | chr1.2:55557551-55557570 | MS.gene32081:CDS | 55.0% |
AGAAGCCATCCATGGTGGCC+AGG | + | chr1.2:55558085-55558104 | MS.gene32081:CDS | 60.0% | |
AGGAAGCAAGCGGGCAAGAG+TGG | + | chr1.2:55559740-55559759 | MS.gene32081:CDS | 60.0% | |
ATGGGGATGGAACGTACGCG+TGG | + | chr1.2:55558185-55558204 | MS.gene32081:CDS | 60.0% | |
GCTGACGTCCCAAGGGTGAA+AGG | + | chr1.2:55558934-55558953 | MS.gene32081:CDS | 60.0% | |
TCTGTCCTGGCCACCATGGA+TGG | - | chr1.2:55558093-55558112 | None:intergenic | 60.0% | |
!! | ACTCGGGTTGAGTCGGATGG+AGG | + | chr1.2:55557554-55557573 | MS.gene32081:CDS | 60.0% |
!! | CTCGGGTTGAGTCGGATGGA+GGG | + | chr1.2:55557555-55557574 | MS.gene32081:CDS | 60.0% |
GCCTGCGCAGATGCATCCGA+GGG | - | chr1.2:55558124-55558143 | None:intergenic | 65.0% | |
TCCCTCGGATGCATCTGCGC+AGG | + | chr1.2:55558120-55558139 | MS.gene32081:CDS | 65.0% | |
TGCCTGCGCAGATGCATCCG+AGG | - | chr1.2:55558125-55558144 | None:intergenic | 65.0% | |
! | GAAGGGGCGCGCTCATAGTC+TGG | - | chr1.2:55559486-55559505 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 55556966 | 55559953 | 55556966 | ID=MS.gene32081 |
chr1.2 | mRNA | 55556966 | 55559953 | 55556966 | ID=MS.gene32081.t1;Parent=MS.gene32081 |
chr1.2 | exon | 55556966 | 55559953 | 55556966 | ID=MS.gene32081.t1.exon1;Parent=MS.gene32081.t1 |
chr1.2 | CDS | 55556966 | 55559953 | 55556966 | ID=cds.MS.gene32081.t1;Parent=MS.gene32081.t1 |
Gene Sequence |
Protein sequence |