Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33615.t1 | XP_013466477.1 | 95.5 | 488 | 22 | 0 | 1 | 488 | 1 | 488 | 9.40E-266 | 925.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33615.t1 | Q70DU8 | 70.4 | 479 | 142 | 0 | 8 | 486 | 4 | 482 | 1.3e-202 | 707.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33615.t1 | A0A072VFE4 | 95.5 | 488 | 22 | 0 | 1 | 488 | 1 | 488 | 6.8e-266 | 925.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33615 | MS.gene037163 | PPI |
| MS.gene012075 | MS.gene33615 | PPI |
| MS.gene62087 | MS.gene33615 | PPI |
| MS.gene33615 | MS.gene042286 | PPI |
| MS.gene33615 | MS.gene012582 | PPI |
| MS.gene33615 | MS.gene057392 | PPI |
| MS.gene025244 | MS.gene33615 | PPI |
| MS.gene33615 | MS.gene030576 | PPI |
| MS.gene33615 | MS.gene76463 | PPI |
| MS.gene33615 | MS.gene49712 | PPI |
| MS.gene33615 | MS.gene70176 | PPI |
| MS.gene33615 | MS.gene035576 | PPI |
| MS.gene33139 | MS.gene33615 | PPI |
| MS.gene33615 | MS.gene89630 | PPI |
| MS.gene33615 | MS.gene64463 | PPI |
| MS.gene33615 | MS.gene016051 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33615.t1 | MTR_1g029840 | 95.492 | 488 | 22 | 0 | 1 | 488 | 1 | 488 | 0.0 | 962 |
| MS.gene33615.t1 | MTR_1g029840 | 89.189 | 481 | 52 | 0 | 8 | 488 | 8 | 488 | 0.0 | 884 |
| MS.gene33615.t1 | MTR_3g088150 | 78.468 | 483 | 104 | 0 | 6 | 488 | 8 | 490 | 0.0 | 811 |
| MS.gene33615.t1 | MTR_8g094600 | 66.667 | 486 | 162 | 0 | 3 | 488 | 56 | 541 | 0.0 | 693 |
| MS.gene33615.t1 | MTR_8g076480 | 50.111 | 451 | 225 | 0 | 20 | 470 | 13 | 463 | 1.95e-167 | 481 |
| MS.gene33615.t1 | MTR_2g097950 | 47.599 | 479 | 248 | 1 | 11 | 486 | 15 | 493 | 1.04e-157 | 457 |
| MS.gene33615.t1 | MTR_4g065040 | 52.423 | 454 | 213 | 1 | 20 | 470 | 9 | 462 | 1.93e-148 | 433 |
| MS.gene33615.t1 | MTR_2g097950 | 45.168 | 476 | 229 | 2 | 11 | 486 | 15 | 458 | 1.91e-140 | 412 |
| MS.gene33615.t1 | MTR_1222s0010 | 36.483 | 381 | 230 | 5 | 19 | 395 | 8 | 380 | 1.74e-80 | 265 |
| MS.gene33615.t1 | MTR_1314s0010 | 36.982 | 338 | 203 | 4 | 116 | 445 | 1 | 336 | 1.12e-74 | 239 |
| MS.gene33615.t1 | MTR_2g034160 | 25.111 | 450 | 305 | 10 | 34 | 466 | 106 | 540 | 3.57e-37 | 144 |
| MS.gene33615.t1 | MTR_4g106510 | 29.917 | 361 | 238 | 8 | 95 | 445 | 130 | 485 | 1.77e-36 | 141 |
| MS.gene33615.t1 | MTR_3g078550 | 30.194 | 361 | 237 | 7 | 95 | 445 | 100 | 455 | 3.89e-36 | 140 |
| MS.gene33615.t1 | MTR_3g078550 | 30.194 | 361 | 237 | 7 | 95 | 445 | 130 | 485 | 4.63e-36 | 140 |
| MS.gene33615.t1 | MTR_2g067660 | 27.778 | 414 | 280 | 11 | 42 | 446 | 112 | 515 | 1.49e-35 | 139 |
| MS.gene33615.t1 | MTR_3g078490 | 29.462 | 353 | 232 | 8 | 103 | 445 | 170 | 515 | 6.68e-34 | 134 |
| MS.gene33615.t1 | MTR_4g107040 | 29.738 | 343 | 231 | 7 | 111 | 446 | 196 | 535 | 3.38e-31 | 127 |
| MS.gene33615.t1 | MTR_8g064170 | 28.501 | 407 | 275 | 10 | 48 | 446 | 134 | 532 | 5.62e-31 | 126 |
| MS.gene33615.t1 | MTR_3g078170 | 30.612 | 343 | 228 | 8 | 111 | 446 | 194 | 533 | 1.60e-30 | 124 |
| MS.gene33615.t1 | MTR_8g083530 | 28.228 | 457 | 283 | 19 | 12 | 446 | 61 | 494 | 3.43e-29 | 120 |
| MS.gene33615.t1 | MTR_6g086300 | 28.857 | 350 | 227 | 11 | 110 | 446 | 153 | 493 | 5.90e-26 | 111 |
| MS.gene33615.t1 | MTR_6g086300 | 28.857 | 350 | 227 | 11 | 110 | 446 | 153 | 493 | 5.90e-26 | 111 |
| MS.gene33615.t1 | MTR_4g131180 | 25.333 | 450 | 299 | 12 | 1 | 429 | 35 | 468 | 7.70e-25 | 107 |
| MS.gene33615.t1 | MTR_6g086340 | 27.806 | 392 | 249 | 15 | 77 | 445 | 110 | 490 | 1.63e-24 | 106 |
| MS.gene33615.t1 | MTR_4g131180 | 25.000 | 440 | 293 | 12 | 1 | 419 | 35 | 458 | 1.20e-21 | 98.2 |
| MS.gene33615.t1 | MTR_8g064170 | 26.238 | 404 | 256 | 12 | 48 | 446 | 134 | 500 | 2.74e-21 | 97.1 |
| MS.gene33615.t1 | MTR_2g009750 | 27.649 | 387 | 232 | 14 | 48 | 406 | 79 | 445 | 2.77e-21 | 97.1 |
| MS.gene33615.t1 | MTR_2g009750 | 27.649 | 387 | 232 | 14 | 48 | 406 | 80 | 446 | 2.79e-21 | 97.1 |
| MS.gene33615.t1 | MTR_1g014320 | 24.719 | 445 | 308 | 11 | 1 | 429 | 35 | 468 | 3.91e-21 | 96.7 |
| MS.gene33615.t1 | MTR_4g020720 | 42.308 | 130 | 66 | 4 | 183 | 306 | 116 | 242 | 6.83e-21 | 92.8 |
| MS.gene33615.t1 | MTR_2g009750 | 27.390 | 387 | 234 | 14 | 48 | 406 | 80 | 447 | 9.20e-21 | 95.5 |
| MS.gene33615.t1 | MTR_3g078170 | 30.350 | 257 | 171 | 7 | 111 | 360 | 194 | 449 | 1.30e-20 | 94.7 |
| MS.gene33615.t1 | MTR_4g093170 | 26.948 | 308 | 204 | 8 | 113 | 406 | 174 | 474 | 7.10e-19 | 89.7 |
| MS.gene33615.t1 | MTR_8g083520 | 24.747 | 396 | 233 | 14 | 73 | 446 | 20 | 372 | 1.34e-18 | 87.8 |
| MS.gene33615.t1 | MTR_8g083520 | 24.747 | 396 | 233 | 14 | 73 | 446 | 100 | 452 | 1.73e-18 | 88.2 |
| MS.gene33615.t1 | MTR_3g078490 | 34.444 | 180 | 108 | 5 | 103 | 277 | 140 | 314 | 6.52e-17 | 82.8 |
| MS.gene33615.t1 | MTR_2g042330 | 23.907 | 343 | 243 | 9 | 113 | 442 | 152 | 489 | 9.90e-17 | 83.2 |
| MS.gene33615.t1 | MTR_3g078170 | 29.412 | 238 | 160 | 7 | 111 | 341 | 194 | 430 | 4.30e-16 | 80.9 |
| MS.gene33615.t1 | MTR_3g078170 | 29.412 | 238 | 160 | 7 | 111 | 341 | 194 | 430 | 5.33e-16 | 80.5 |
| MS.gene33615.t1 | MTR_4g020710 | 52.941 | 68 | 32 | 0 | 301 | 368 | 16 | 83 | 1.14e-15 | 74.3 |
| MS.gene33615.t1 | MTR_8g083530 | 30.651 | 261 | 153 | 12 | 12 | 259 | 61 | 306 | 1.09e-13 | 72.8 |
| MS.gene33615.t1 | MTR_1399s0020 | 29.688 | 192 | 128 | 5 | 252 | 440 | 145 | 332 | 3.88e-13 | 70.9 |
| MS.gene33615.t1 | MTR_1690s0010 | 26.786 | 280 | 173 | 11 | 48 | 312 | 83 | 345 | 2.09e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33615.t1 | AT1G44170 | 70.355 | 479 | 142 | 0 | 8 | 486 | 4 | 482 | 0.0 | 729 |
| MS.gene33615.t1 | AT1G44170 | 70.355 | 479 | 142 | 0 | 8 | 486 | 4 | 482 | 0.0 | 729 |
| MS.gene33615.t1 | AT1G44170 | 74.209 | 411 | 106 | 0 | 76 | 486 | 9 | 419 | 0.0 | 664 |
| MS.gene33615.t1 | AT4G34240 | 65.631 | 483 | 166 | 0 | 6 | 488 | 50 | 532 | 0.0 | 655 |
| MS.gene33615.t1 | AT4G34240 | 65.631 | 483 | 166 | 0 | 6 | 488 | 65 | 547 | 0.0 | 655 |
| MS.gene33615.t1 | AT4G34240 | 70.968 | 403 | 117 | 0 | 86 | 488 | 3 | 405 | 0.0 | 588 |
| MS.gene33615.t1 | AT4G36250 | 47.021 | 470 | 246 | 1 | 20 | 486 | 12 | 481 | 5.94e-163 | 470 |
| MS.gene33615.t1 | AT4G34240 | 65.951 | 326 | 111 | 0 | 6 | 331 | 65 | 390 | 2.02e-151 | 437 |
| MS.gene33615.t1 | AT3G66658 | 27.064 | 436 | 292 | 8 | 34 | 451 | 106 | 533 | 6.82e-41 | 154 |
| MS.gene33615.t1 | AT3G66658 | 26.569 | 478 | 316 | 10 | 34 | 484 | 106 | 575 | 1.39e-40 | 154 |
| MS.gene33615.t1 | AT1G74920 | 30.055 | 366 | 240 | 9 | 95 | 449 | 125 | 485 | 2.43e-40 | 152 |
| MS.gene33615.t1 | AT1G74920 | 30.055 | 366 | 240 | 9 | 95 | 449 | 130 | 490 | 3.04e-40 | 152 |
| MS.gene33615.t1 | AT1G23800 | 28.090 | 445 | 302 | 11 | 12 | 446 | 89 | 525 | 1.50e-35 | 139 |
| MS.gene33615.t1 | AT3G48170 | 28.779 | 344 | 230 | 7 | 112 | 445 | 147 | 485 | 2.26e-35 | 138 |
| MS.gene33615.t1 | AT1G79440 | 28.241 | 432 | 289 | 12 | 25 | 446 | 101 | 521 | 5.59e-35 | 137 |
| MS.gene33615.t1 | AT3G48000 | 27.655 | 452 | 295 | 14 | 12 | 446 | 93 | 529 | 2.48e-29 | 121 |
| MS.gene33615.t1 | AT3G24503 | 27.405 | 343 | 235 | 9 | 113 | 446 | 155 | 492 | 3.08e-27 | 114 |
| MS.gene33615.t1 | AT2G24270 | 25.112 | 446 | 305 | 13 | 1 | 429 | 75 | 508 | 4.15e-22 | 99.8 |
| MS.gene33615.t1 | AT2G24270 | 25.112 | 446 | 305 | 13 | 1 | 429 | 35 | 468 | 4.49e-22 | 99.4 |
| MS.gene33615.t1 | AT2G24270 | 25.112 | 446 | 305 | 13 | 1 | 429 | 35 | 468 | 5.64e-22 | 99.4 |
| MS.gene33615.t1 | AT2G24270 | 25.112 | 446 | 305 | 13 | 1 | 429 | 35 | 468 | 5.64e-22 | 99.4 |
| MS.gene33615.t1 | AT1G54100 | 22.714 | 339 | 246 | 8 | 116 | 442 | 154 | 488 | 9.54e-20 | 92.4 |
| MS.gene33615.t1 | AT1G54100 | 22.714 | 339 | 246 | 8 | 116 | 442 | 154 | 488 | 9.54e-20 | 92.4 |
| MS.gene33615.t1 | AT2G14170 | 25.707 | 389 | 254 | 15 | 78 | 448 | 109 | 480 | 8.99e-19 | 89.4 |
| MS.gene33615.t1 | AT2G14170 | 25.907 | 386 | 251 | 15 | 78 | 445 | 218 | 586 | 9.43e-19 | 89.7 |
| MS.gene33615.t1 | AT2G14170 | 26.087 | 345 | 223 | 13 | 78 | 406 | 218 | 546 | 3.11e-17 | 85.1 |
| MS.gene33615.t1 | AT1G23800 | 28.627 | 255 | 169 | 7 | 12 | 259 | 89 | 337 | 7.61e-16 | 79.7 |
Find 96 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGATGATGACAAAGTTTC+TGG | 0.156174 | 1.1:-15710282 | MS.gene33615:CDS |
| GCTATAATTCGTGCCTTATT+TGG | 0.169978 | 1.1:-15708823 | MS.gene33615:CDS |
| CGATCGCTTGATAAAGCTTT+TGG | 0.222465 | 1.1:-15710301 | MS.gene33615:CDS |
| TTATCACTTGATCCAGTAAT+TGG | 0.245135 | 1.1:-15711413 | MS.gene33615:CDS |
| GCAATTCATACTTTGCCTTT+TGG | 0.268675 | 1.1:-15709021 | MS.gene33615:CDS |
| TGATTCAAATATCAACTTAC+AGG | 0.279419 | 1.1:-15710831 | MS.gene33615:intron |
| ATTTATCATGACGAATGAAT+TGG | 0.307322 | 1.1:-15714832 | None:intergenic |
| ATTCTAGGACCTTCCAAATA+AGG | 0.309348 | 1.1:+15708810 | None:intergenic |
| GCTGCAATAGCTCCAATTAC+TGG | 0.309379 | 1.1:+15711401 | None:intergenic |
| TTTGTTGTTATGATATAATC+TGG | 0.316109 | 1.1:+15710519 | None:intergenic |
| GATTAGCCCTACTGTTCTAT+TGG | 0.328993 | 1.1:-15710112 | MS.gene33615:CDS |
| TCGTTGCTGGCAAAACTGTT+AGG | 0.339610 | 1.1:-15711329 | MS.gene33615:CDS |
| AGCTTTGATGTGATAAATTC+AGG | 0.353189 | 1.1:-15709728 | MS.gene33615:CDS |
| GACTGTTTCTGCTGGTGGTT+TGG | 0.353589 | 1.1:-15709642 | MS.gene33615:CDS |
| CATCAATCTCATCTTTGTAT+TGG | 0.356661 | 1.1:+15708873 | None:intergenic |
| TCCAGCCACATCATCGTTGC+TGG | 0.362338 | 1.1:-15711342 | MS.gene33615:CDS |
| GTTTCTGGTAAGATTGTTCA+TGG | 0.366193 | 1.1:-15710267 | MS.gene33615:CDS |
| CCTCCAAGCTCCAGCACAAC+TGG | 0.367836 | 1.1:+15710872 | None:intergenic |
| CTGAGAGAAACATTTGGTTC+TGG | 0.383711 | 1.1:-15714759 | MS.gene33615:CDS |
| CTCATCTTTGTATTGGTGTA+TGG | 0.403429 | 1.1:+15708880 | None:intergenic |
| ACACCAGTTGTGCTGGAGCT+TGG | 0.416382 | 1.1:-15710875 | MS.gene33615:CDS |
| ATATTTGAATCAACAACAAC+TGG | 0.421798 | 1.1:+15710842 | None:intergenic |
| CGTTGCTGGCAAAACTGTTA+GGG | 0.425700 | 1.1:-15711328 | MS.gene33615:CDS |
| CTTAATTCGTACCGTGATGA+TGG | 0.427177 | 1.1:+15710035 | None:intergenic |
| ATAATGAGCGAAGAGATATT+TGG | 0.444128 | 1.1:-15710069 | MS.gene33615:CDS |
| TTTGTTAAGACTGTTTCTGC+TGG | 0.453254 | 1.1:-15709650 | MS.gene33615:CDS |
| GATTGTTCATGGAGGTGAAA+AGG | 0.454910 | 1.1:-15710256 | MS.gene33615:CDS |
| GATACTATTTCAGCTGAAGA+AGG | 0.460660 | 1.1:+15711797 | None:intergenic |
| GCATTGGATGGCTCCGGAAA+AGG | 0.463175 | 1.1:-15711943 | MS.gene33615:intron |
| GGAGTAGGTGAGAGTGGAGT+GGG | 0.469025 | 1.1:-15708997 | MS.gene33615:CDS |
| ATATATGCAGCAAGAGGCTT+CGG | 0.476234 | 1.1:+15709704 | None:intergenic |
| AAGAATAATCGCAGGAAAGT+GGG | 0.482291 | 1.1:-15710571 | MS.gene33615:CDS |
| GCACCTTACACCAGTTGTGC+TGG | 0.485174 | 1.1:-15710882 | MS.gene33615:CDS |
| AATGAACTGAGAGAAACATT+TGG | 0.485463 | 1.1:-15714765 | MS.gene33615:CDS |
| GTTAAGACTGTTTCTGCTGG+TGG | 0.490673 | 1.1:-15709647 | MS.gene33615:CDS |
| CCAGTTGTGCTGGAGCTTGG+AGG | 0.497518 | 1.1:-15710872 | MS.gene33615:CDS |
| CACTCAAGGAATTGAAGCAT+TGG | 0.498600 | 1.1:-15711959 | MS.gene33615:CDS |
| CTGCATTACTGCAACAAAAG+TGG | 0.500097 | 1.1:-15711250 | MS.gene33615:CDS |
| GAAGAATAATCGCAGGAAAG+TGG | 0.501312 | 1.1:-15710572 | MS.gene33615:CDS |
| CTCATGTAAAACTGCACTCA+AGG | 0.507865 | 1.1:-15711973 | MS.gene33615:CDS |
| AATATGTTTGATATTGAAGC+GGG | 0.509498 | 1.1:-15714801 | MS.gene33615:CDS |
| GAGATTGATGAAGGCTCTCA+TGG | 0.510072 | 1.1:-15708860 | MS.gene33615:CDS |
| GCTCCAGCACAACTGGTGTA+AGG | 0.510660 | 1.1:+15710879 | None:intergenic |
| AAAAGATTATGCTCCTAAGT+TGG | 0.511228 | 1.1:-15710499 | MS.gene33615:intron |
| TACAAAGATGAGATTGATGA+AGG | 0.513208 | 1.1:-15708869 | MS.gene33615:CDS |
| GTAATTGGAGCTATTGCAGC+TGG | 0.513650 | 1.1:-15711398 | MS.gene33615:CDS |
| GGAAAGTGGGGTTGCAACAA+TGG | 0.514589 | 1.1:-15710558 | MS.gene33615:CDS |
| CTCATCTATAAGAGTTGTAG+AGG | 0.519118 | 1.1:-15711291 | MS.gene33615:CDS |
| TAATTCGTGCCTTATTTGGA+AGG | 0.524002 | 1.1:-15708819 | MS.gene33615:CDS |
| ATTGAAGCATTGGATGGCTC+CGG | 0.525858 | 1.1:-15711949 | MS.gene33615:CDS |
| TCTCAGTTCATTCACCAGCA+TGG | 0.536562 | 1.1:+15714776 | None:intergenic |
| GCCAGCAACGATGATGTGGC+TGG | 0.536814 | 1.1:+15711341 | None:intergenic |
| TTTGGAGGAGTAGGTGAGAG+TGG | 0.537231 | 1.1:-15709003 | MS.gene33615:CDS |
| GGGACATCCAATAGAACAGT+AGG | 0.538615 | 1.1:+15710105 | None:intergenic |
| CTCTCACCTACTCCTCCAAA+AGG | 0.540508 | 1.1:+15709006 | None:intergenic |
| TGCATTACTGCAACAAAAGT+GGG | 0.550398 | 1.1:-15711249 | MS.gene33615:CDS |
| ATGAAGGCTCTCATGGGTGG+TGG | 0.551497 | 1.1:-15708853 | MS.gene33615:CDS |
| ATCTTTGTATTGGTGTATGG+TGG | 0.551950 | 1.1:+15708883 | None:intergenic |
| AGGAGTAGGTGAGAGTGGAG+TGG | 0.559793 | 1.1:-15708998 | MS.gene33615:CDS |
| TCATCTATAAGAGTTGTAGA+GGG | 0.565455 | 1.1:-15711290 | MS.gene33615:CDS |
| GTAAATATATATGCAGCAAG+AGG | 0.571237 | 1.1:+15709698 | None:intergenic |
| TTAATTCGTACCGTGATGAT+GGG | 0.573561 | 1.1:+15710036 | None:intergenic |
| ACCGTGATGATGGGAAGTAA+TGG | 0.581585 | 1.1:+15710045 | None:intergenic |
| GTGGAGTGGGTGCATACCAT+GGG | 0.583372 | 1.1:-15708984 | MS.gene33615:CDS |
| AGATAATAACCGAACCTCGT+AGG | 0.589486 | 1.1:+15714608 | None:intergenic |
| CAAGGAATTGAAGCATTGGA+TGG | 0.593249 | 1.1:-15711955 | MS.gene33615:CDS |
| TATTGAAGCGGGATCCATGC+TGG | 0.595201 | 1.1:-15714790 | MS.gene33615:CDS |
| TAGGCGACAGTTTCAAGAGG+GGG | 0.597379 | 1.1:+15714627 | None:intergenic |
| CGTAGGCGACAGTTTCAAGA+GGG | 0.597923 | 1.1:+15714625 | None:intergenic |
| GAATATGTTTGATATTGAAG+CGG | 0.599467 | 1.1:-15714802 | MS.gene33615:CDS |
| AAAACTGTTAGGGGAATACA+TGG | 0.600533 | 1.1:-15711318 | MS.gene33615:CDS |
| GTGGCTGGAGAAATTTCTGA+TGG | 0.612827 | 1.1:+15711356 | None:intergenic |
| GTTGCTGGCAAAACTGTTAG+GGG | 0.625264 | 1.1:-15711327 | MS.gene33615:CDS |
| TCCATTACTTCCCATCATCA+CGG | 0.627032 | 1.1:-15710046 | MS.gene33615:intron |
| GCAACTAGAAGAATAATCGC+AGG | 0.633977 | 1.1:-15710579 | MS.gene33615:CDS |
| TACAAACGACAAGAAGCTCA+AGG | 0.637163 | 1.1:-15709678 | MS.gene33615:CDS |
| AGAATAATCGCAGGAAAGTG+GGG | 0.639338 | 1.1:-15710570 | MS.gene33615:CDS |
| AGTGGAGTGGGTGCATACCA+TGG | 0.641447 | 1.1:-15708985 | MS.gene33615:CDS |
| ATCTATAAGAGTTGTAGAGG+GGG | 0.643187 | 1.1:-15711288 | MS.gene33615:CDS |
| GAAATAGTATCTGAACCACT+TGG | 0.643478 | 1.1:-15711785 | MS.gene33615:CDS |
| GGACATCCAATAGAACAGTA+GGG | 0.647357 | 1.1:+15710106 | None:intergenic |
| ATGATCAACACAACTCCAAG+TGG | 0.650557 | 1.1:+15711770 | None:intergenic |
| GCTTTATCAAGCGATCGAAG+TGG | 0.653845 | 1.1:+15710307 | None:intergenic |
| TTGTGTTGATCATCTCTGCA+TGG | 0.653993 | 1.1:-15711760 | MS.gene33615:CDS |
| AAGAGTGGCACGCATTGTGA+TGG | 0.659619 | 1.1:-15710918 | MS.gene33615:CDS |
| AGATTGATGAAGGCTCTCAT+GGG | 0.665748 | 1.1:-15708859 | MS.gene33615:CDS |
| TCGTAGGCGACAGTTTCAAG+AGG | 0.669261 | 1.1:+15714624 | None:intergenic |
| CATCAAATGAGAATTTCCCA+TGG | 0.672895 | 1.1:+15708968 | None:intergenic |
| CATCTATAAGAGTTGTAGAG+GGG | 0.673139 | 1.1:-15711289 | MS.gene33615:CDS |
| CTCATTATCAGAGAATCACG+CGG | 0.673973 | 1.1:+15710084 | None:intergenic |
| TCTTGAAACTGTCGCCTACG+AGG | 0.676445 | 1.1:-15714622 | MS.gene33615:intron |
| TTGATGAAGGCTCTCATGGG+TGG | 0.678752 | 1.1:-15708856 | MS.gene33615:CDS |
| TATTGCAGCTGGTAACGCTG+TGG | 0.684388 | 1.1:-15711387 | MS.gene33615:CDS |
| TCTGGTAAGATTGTTCATGG+AGG | 0.703693 | 1.1:-15710264 | MS.gene33615:CDS |
| GTAGGCGACAGTTTCAAGAG+GGG | 0.712753 | 1.1:+15714626 | None:intergenic |
| TCATTATCAGAGAATCACGC+GGG | 0.717383 | 1.1:+15710085 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTAACATACAAAA+TGG | + | chr1.1:15711910-15711929 | None:intergenic | 10.0% |
| !!! | AATTAAAATTTGCATTTTTT+TGG | - | chr1.1:15709892-15709911 | MS.gene33615:intron | 10.0% |
| !!! | TAATAATTTTTTTCATATCA+TGG | + | chr1.1:15711355-15711374 | None:intergenic | 10.0% |
| !!! | TTAAGTATATCTTTTTAAAA+TGG | - | chr1.1:15710036-15710055 | MS.gene33615:intron | 10.0% |
| !!! | TTTTTCTTTTTTAATTTTTC+TGG | - | chr1.1:15709374-15709393 | MS.gene33615:intron | 10.0% |
| !! | AACATAAAAGCTTATTATTT+GGG | + | chr1.1:15709616-15709635 | None:intergenic | 15.0% |
| !! | GAAATTTATTCAAATAAAAG+TGG | - | chr1.1:15714385-15714404 | MS.gene33615:intron | 15.0% |
| !! | TAACATAAAAGCTTATTATT+TGG | + | chr1.1:15709617-15709636 | None:intergenic | 15.0% |
| !! | TATGGTTTATAATTCTTAAT+TGG | - | chr1.1:15712462-15712481 | MS.gene33615:intron | 15.0% |
| !! | TCATTTCATTAGAAAATATA+TGG | + | chr1.1:15714318-15714337 | None:intergenic | 15.0% |
| !! | TGAAATAAATATCATTACTA+TGG | + | chr1.1:15710841-15710860 | None:intergenic | 15.0% |
| !! | TTTATGTAATATTCATAAGT+TGG | + | chr1.1:15709701-15709720 | None:intergenic | 15.0% |
| !!! | ATTTGTGTTATTTTAGTTTT+TGG | - | chr1.1:15711008-15711027 | MS.gene33615:intron | 15.0% |
| !!! | CAAACATTATCTTTAATTTT+GGG | + | chr1.1:15710671-15710690 | None:intergenic | 15.0% |
| !!! | CATTTATTGTTGTTATTTAT+GGG | - | chr1.1:15709226-15709245 | MS.gene33615:intron | 15.0% |
| !!! | TAAAAATCCAAACTTAATTT+TGG | + | chr1.1:15709858-15709877 | None:intergenic | 15.0% |
| !!! | TCATTTATTGTTGTTATTTA+TGG | - | chr1.1:15709225-15709244 | MS.gene33615:intron | 15.0% |
| !!! | TTATTAGTATTATTCTTTTG+TGG | - | chr1.1:15709078-15709097 | MS.gene33615:intron | 15.0% |
| !! | ACTATTTAACAATACAAAGT+TGG | + | chr1.1:15710220-15710239 | None:intergenic | 20.0% |
| !! | ATCTGAATTCAAATAAATGA+TGG | - | chr1.1:15709987-15710006 | MS.gene33615:intron | 20.0% |
| !! | CCAAAATTAAAGATAATGTT+TGG | - | chr1.1:15710669-15710688 | MS.gene33615:intron | 20.0% |
| !! | CTTGTAGTTATCTTATAAAA+AGG | + | chr1.1:15713747-15713766 | None:intergenic | 20.0% |
| !! | TAAATTTAACAACACAATGT+TGG | + | chr1.1:15710146-15710165 | None:intergenic | 20.0% |
| !! | TATTTATATCTTCTCATACT+TGG | - | chr1.1:15711609-15711628 | MS.gene33615:intron | 20.0% |
| !! | TGTCAAAAATTGTATTGTTA+TGG | - | chr1.1:15714227-15714246 | MS.gene33615:intron | 20.0% |
| !! | TTAAAGATAATGTTTGGATT+TGG | - | chr1.1:15710675-15710694 | MS.gene33615:intron | 20.0% |
| !! | TTACTCAAATAAGTAATTGT+TGG | - | chr1.1:15712682-15712701 | MS.gene33615:intron | 20.0% |
| !! | TTAGAATGCTAATTAAACTT+AGG | + | chr1.1:15713177-15713196 | None:intergenic | 20.0% |
| !! | TTTATTTAGTGATTAGTGTT+TGG | - | chr1.1:15713206-15713225 | MS.gene33615:intron | 20.0% |
| !!! | ACATTTTGAATACTTTTAAC+AGG | - | chr1.1:15711409-15711428 | MS.gene33615:CDS | 20.0% |
| !!! | ATTTTATGGAAAGAATCAAT+TGG | - | chr1.1:15713274-15713293 | MS.gene33615:intron | 20.0% |
| !!! | CATTTTGAATACTTTTAACA+GGG | - | chr1.1:15711410-15711429 | MS.gene33615:CDS | 20.0% |
| !!! | CCAAACATTATCTTTAATTT+TGG | + | chr1.1:15710672-15710691 | None:intergenic | 20.0% |
| !!! | TAAGTAATTGTTGGTTTTTT+AGG | - | chr1.1:15712691-15712710 | MS.gene33615:intron | 20.0% |
| !!! | TACATCATACATTTACATTT+TGG | - | chr1.1:15712941-15712960 | MS.gene33615:intron | 20.0% |
| !!! | TTTGATAGCAAACTAATATT+AGG | - | chr1.1:15711306-15711325 | MS.gene33615:CDS | 20.0% |
| !!! | TTTGTTGTTATGATATAATC+TGG | + | chr1.1:15713122-15713141 | None:intergenic | 20.0% |
| ! | AAACCATAAAAGAAAACCAA+AGG | + | chr1.1:15712450-15712469 | None:intergenic | 25.0% |
| ! | AAACGATCCAAAATTAAGTT+TGG | - | chr1.1:15709848-15709867 | MS.gene33615:intron | 25.0% |
| ! | AACCATAAAAGAAAACCAAA+GGG | + | chr1.1:15712449-15712468 | None:intergenic | 25.0% |
| ! | AAGCTCAAAAATAAGTCAAA+CGG | - | chr1.1:15709752-15709771 | MS.gene33615:intron | 25.0% |
| ! | AAGTTTGATAGAAAAACAGT+TGG | - | chr1.1:15711438-15711457 | MS.gene33615:intron | 25.0% |
| ! | AATATGTTTGATATTGAAGC+GGG | - | chr1.1:15708837-15708856 | MS.gene33615:CDS | 25.0% |
| ! | ACAAGTACTTGTATAGAAAA+TGG | + | chr1.1:15712562-15712581 | None:intergenic | 25.0% |
| ! | AGTATAATAATTGAATGCAC+AGG | + | chr1.1:15711194-15711213 | None:intergenic | 25.0% |
| ! | AGTTTAAAAGCTTAAAAAGC+TGG | + | chr1.1:15708944-15708963 | None:intergenic | 25.0% |
| ! | ATATTTGAATCAACAACAAC+TGG | + | chr1.1:15712799-15712818 | None:intergenic | 25.0% |
| ! | ATGTAAATGTATGATGTATC+TGG | + | chr1.1:15712939-15712958 | None:intergenic | 25.0% |
| ! | CAAAAATTGTATTGTTATGG+AGG | - | chr1.1:15714230-15714249 | MS.gene33615:intron | 25.0% |
| ! | CATATAAAAATGACATTCAC+AGG | + | chr1.1:15714097-15714116 | None:intergenic | 25.0% |
| ! | GAAAAACTTATTACCAACTT+AGG | + | chr1.1:15713155-15713174 | None:intergenic | 25.0% |
| ! | GAATATGTTTGATATTGAAG+CGG | - | chr1.1:15708836-15708855 | MS.gene33615:CDS | 25.0% |
| ! | GTAGTTATCTTATAAAAAGG+TGG | + | chr1.1:15713744-15713763 | None:intergenic | 25.0% |
| ! | GTATTTAACGAGTATTATTC+TGG | - | chr1.1:15712869-15712888 | MS.gene33615:intron | 25.0% |
| ! | TACTATGGTTTGAATACTTT+AGG | + | chr1.1:15710826-15710845 | None:intergenic | 25.0% |
| ! | TACTTGAACTTAAAATTGCA+AGG | - | chr1.1:15713034-15713053 | MS.gene33615:intron | 25.0% |
| ! | TCTTTCATGATTTGACAAAT+AGG | - | chr1.1:15711095-15711114 | MS.gene33615:intron | 25.0% |
| ! | TGATTCAAATATCAACTTAC+AGG | - | chr1.1:15712807-15712826 | MS.gene33615:intron | 25.0% |
| ! | TGTTAAATAGTTCCATGATA+TGG | - | chr1.1:15710229-15710248 | MS.gene33615:intron | 25.0% |
| ! | TTAACGATGAAGATATTGTT+AGG | + | chr1.1:15709141-15709160 | None:intergenic | 25.0% |
| ! | TTGTACTAAATACCATATCA+TGG | + | chr1.1:15710244-15710263 | None:intergenic | 25.0% |
| !! | ACTGAATTAGAGCAATTTTA+TGG | - | chr1.1:15713260-15713279 | MS.gene33615:intron | 25.0% |
| !! | TTCACATTTTATCTATTTCC+TGG | + | chr1.1:15713784-15713803 | None:intergenic | 25.0% |
| !!! | AACTACTATCACTTTTTGAA+GGG | - | chr1.1:15709465-15709484 | MS.gene33615:intron | 25.0% |
| !!! | ACTTTGTTTTCTTAAATACC+AGG | - | chr1.1:15713501-15713520 | MS.gene33615:intron | 25.0% |
| !!! | AGTTTGTTTTTGAGAGTTAT+AGG | - | chr1.1:15709527-15709546 | MS.gene33615:intron | 25.0% |
| !!! | ATTGTTGGTTTTTTAGGTAA+TGG | - | chr1.1:15712697-15712716 | MS.gene33615:intron | 25.0% |
| !!! | ATTTTTTGCATTTATGCATC+TGG | - | chr1.1:15709802-15709821 | MS.gene33615:intron | 25.0% |
| !!! | TGAACAAATTGTTATTTTCG+TGG | - | chr1.1:15710323-15710342 | MS.gene33615:CDS | 25.0% |
| AAAAGATTATGCTCCTAAGT+TGG | - | chr1.1:15713139-15713158 | MS.gene33615:intron | 30.0% | |
| AAAGACTGAAAGAGAGATTA+AGG | + | chr1.1:15712848-15712867 | None:intergenic | 30.0% | |
| AAAGAGAGATTAAGGACTTA+AGG | + | chr1.1:15712840-15712859 | None:intergenic | 30.0% | |
| AACCAACTTAAAAGCTGATT+TGG | + | chr1.1:15714147-15714166 | None:intergenic | 30.0% | |
| AAGAGAGATTAAGGACTTAA+GGG | + | chr1.1:15712839-15712858 | None:intergenic | 30.0% | |
| AAGTATAACTTACTACAGTG+AGG | - | chr1.1:15714290-15714309 | MS.gene33615:intron | 30.0% | |
| AAGTGTAACAACACATATTG+TGG | + | chr1.1:15710938-15710957 | None:intergenic | 30.0% | |
| AATATCGTCAGTATAGATTG+AGG | + | chr1.1:15712181-15712200 | None:intergenic | 30.0% | |
| AATCTTCATCATTCTACTGT+TGG | + | chr1.1:15710900-15710919 | None:intergenic | 30.0% | |
| AATGAACTGAGAGAAACATT+TGG | - | chr1.1:15708873-15708892 | MS.gene33615:CDS | 30.0% | |
| ACACAAATTCAAAAAACCAG+AGG | + | chr1.1:15710996-15711015 | None:intergenic | 30.0% | |
| ACAGTCTATTTATCTGTTAG+GGG | - | chr1.1:15710063-15710082 | MS.gene33615:CDS | 30.0% | |
| ACCATAAAAGAAAACCAAAG+GGG | + | chr1.1:15712448-15712467 | None:intergenic | 30.0% | |
| ATAAGAAGAGAGTTATTGCA+CGG | + | chr1.1:15710787-15710806 | None:intergenic | 30.0% | |
| ATAATGAGCGAAGAGATATT+TGG | - | chr1.1:15713569-15713588 | MS.gene33615:intron | 30.0% | |
| ATAGCAACACTTTAGATGTT+CGG | - | chr1.1:15710165-15710184 | MS.gene33615:intron | 30.0% | |
| ATATTCCAAATGTGTGAAAG+TGG | - | chr1.1:15709944-15709963 | MS.gene33615:intron | 30.0% | |
| ATCTTCATCATTCTACTGTT+GGG | + | chr1.1:15710899-15710918 | None:intergenic | 30.0% | |
| CAAAAATAAGTCAAACGGTT+GGG | - | chr1.1:15709757-15709776 | MS.gene33615:intron | 30.0% | |
| CAAAAGAAACTTGAGTGTTA+AGG | + | chr1.1:15711290-15711309 | None:intergenic | 30.0% | |
| CACAGTCTATTTATCTGTTA+GGG | - | chr1.1:15710062-15710081 | MS.gene33615:CDS | 30.0% | |
| CACATAAACTAAGAGATTCA+AGG | + | chr1.1:15714072-15714091 | None:intergenic | 30.0% | |
| CATCAATCTCATCTTTGTAT+TGG | + | chr1.1:15714768-15714787 | None:intergenic | 30.0% | |
| GTAAATATATATGCAGCAAG+AGG | + | chr1.1:15713943-15713962 | None:intergenic | 30.0% | |
| GTCTTGAATTATCTACACTA+TGG | - | chr1.1:15710734-15710753 | MS.gene33615:intron | 30.0% | |
| TAAACTAAGAGATTCAAGGA+TGG | + | chr1.1:15714068-15714087 | None:intergenic | 30.0% | |
| TAAATGCAAAAAATCCCAAC+AGG | + | chr1.1:15709796-15709815 | None:intergenic | 30.0% | |
| TACAAAGATGAGATTGATGA+AGG | - | chr1.1:15714769-15714788 | MS.gene33615:CDS | 30.0% | |
| TACTGTATGTTGCAAAATAG+CGG | + | chr1.1:15712057-15712076 | None:intergenic | 30.0% | |
| TATAGATTGAGGATAGAACT+TGG | + | chr1.1:15712170-15712189 | None:intergenic | 30.0% | |
| TATTCCAAATGTGTGAAAGT+GGG | - | chr1.1:15709945-15709964 | MS.gene33615:intron | 30.0% | |
| TCAAAAATAAGTCAAACGGT+TGG | - | chr1.1:15709756-15709775 | MS.gene33615:intron | 30.0% | |
| TCACAGTCTATTTATCTGTT+AGG | - | chr1.1:15710061-15710080 | MS.gene33615:CDS | 30.0% | |
| TCATCTATAAGAGTTGTAGA+GGG | - | chr1.1:15712348-15712367 | MS.gene33615:intron | 30.0% | |
| TCATCTGTAAAGGAAAATGT+AGG | + | chr1.1:15711059-15711078 | None:intergenic | 30.0% | |
| TCTCAAAGTAACAGTTATTG+TGG | + | chr1.1:15713638-15713657 | None:intergenic | 30.0% | |
| TGAGTAAATGATATGATCGA+AGG | + | chr1.1:15712669-15712688 | None:intergenic | 30.0% | |
| TGCGTGGAAGTTTATTAAAA+TGG | - | chr1.1:15712642-15712661 | MS.gene33615:intron | 30.0% | |
| TGTAAATAGAAGTTCAGTGA+AGG | - | chr1.1:15714115-15714134 | MS.gene33615:intron | 30.0% | |
| TTAAGACTTAATGTGATCCA+AGG | + | chr1.1:15713011-15713030 | None:intergenic | 30.0% | |
| TTATCACTTGATCCAGTAAT+TGG | - | chr1.1:15712225-15712244 | MS.gene33615:intron | 30.0% | |
| TTGAACTTAAAATTGCAAGG+TGG | - | chr1.1:15713037-15713056 | MS.gene33615:intron | 30.0% | |
| ! | AGCTTTGATGTGATAAATTC+AGG | - | chr1.1:15713910-15713929 | MS.gene33615:intron | 30.0% |
| ! | CATTTTATCTATTTCCTGGT+TGG | + | chr1.1:15713780-15713799 | None:intergenic | 30.0% |
| ! | CTTTGATCATAGAGTTTTCA+GGG | - | chr1.1:15712597-15712616 | MS.gene33615:intron | 30.0% |
| ! | GTGTCTTCAATCTGAAATAT+AGG | + | chr1.1:15714462-15714481 | None:intergenic | 30.0% |
| ! | TTATGGGTCCAGATTTTATT+GGG | - | chr1.1:15709242-15709261 | MS.gene33615:intron | 30.0% |
| ! | TTGTTTTCTTAAATACCAGG+AGG | - | chr1.1:15713504-15713523 | MS.gene33615:intron | 30.0% |
| ! | TTTATGGGTCCAGATTTTAT+TGG | - | chr1.1:15709241-15709260 | MS.gene33615:intron | 30.0% |
| ! | TTTTTACCCCCAATAAAATC+TGG | + | chr1.1:15709253-15709272 | None:intergenic | 30.0% |
| !! | GTAATATTCATAAGTTGGTC+TGG | + | chr1.1:15709696-15709715 | None:intergenic | 30.0% |
| !!! | ACTACTATCACTTTTTGAAG+GGG | - | chr1.1:15709466-15709485 | MS.gene33615:intron | 30.0% |
| !!! | ATGTTTTGACCTGCATTAAA+GGG | + | chr1.1:15711807-15711826 | None:intergenic | 30.0% |
| !!! | CAAATTGTTATTTTCGTGGT+CGG | - | chr1.1:15710327-15710346 | MS.gene33615:CDS | 30.0% |
| !!! | CAAGATATTTTAATCCAACC+AGG | - | chr1.1:15713763-15713782 | MS.gene33615:intron | 30.0% |
| !!! | CTTTTTTGGAGGTTTTTCAT+TGG | - | chr1.1:15713434-15713453 | MS.gene33615:intron | 30.0% |
| !!! | GAACTACTATCACTTTTTGA+AGG | - | chr1.1:15709464-15709483 | MS.gene33615:intron | 30.0% |
| !!! | GATAAAGAACTGCTTTTTTG+TGG | + | chr1.1:15714703-15714722 | None:intergenic | 30.0% |
| !!! | GTTCTTTATCGCAGTTTTTT+TGG | - | chr1.1:15714713-15714732 | MS.gene33615:CDS | 30.0% |
| !!! | TCAAGAGTTATTTTTACCCT+TGG | - | chr1.1:15711258-15711277 | MS.gene33615:CDS | 30.0% |
| !!! | TCATATGTGCTTTTTTCACT+TGG | - | chr1.1:15714586-15714605 | MS.gene33615:intron | 30.0% |
| !!! | TTTTTGGTGATGCTTCTATT+AGG | - | chr1.1:15714729-15714748 | MS.gene33615:CDS | 30.0% |
| !!! | TTTTTTAGGTAATGGAAGAG+TGG | - | chr1.1:15712705-15712724 | MS.gene33615:intron | 30.0% |
| AAAACTGTTAGGGGAATACA+TGG | - | chr1.1:15712320-15712339 | MS.gene33615:intron | 35.0% | |
| AAACCTCCAAAAAAGAAGAC+AGG | + | chr1.1:15713429-15713448 | None:intergenic | 35.0% | |
| AACCTCCAAAAAAGAAGACA+GGG | + | chr1.1:15713428-15713447 | None:intergenic | 35.0% | |
| AAGAATAATCGCAGGAAAGT+GGG | - | chr1.1:15713067-15713086 | MS.gene33615:intron | 35.0% | |
| AATCAGTAGAAGCAAATGCA+AGG | + | chr1.1:15714354-15714373 | None:intergenic | 35.0% | |
| AATCTTCTACTTATAGGTGG+TGG | - | chr1.1:15709492-15709511 | MS.gene33615:intron | 35.0% | |
| ACCAATCTTCTACTTATAGG+TGG | - | chr1.1:15709489-15709508 | MS.gene33615:intron | 35.0% | |
| ACCACCTATAAGTAGAAGAT+TGG | + | chr1.1:15709493-15709512 | None:intergenic | 35.0% | |
| AGCATCCGTTGAAGAAAAAA+AGG | + | chr1.1:15714411-15714430 | None:intergenic | 35.0% | |
| ATATGCTATTAAGTGTGTGG+TGG | - | chr1.1:15711032-15711051 | MS.gene33615:intron | 35.0% | |
| ATCAGTAGAAGCAAATGCAA+GGG | + | chr1.1:15714353-15714372 | None:intergenic | 35.0% | |
| ATCTATAAGAGTTGTAGAGG+GGG | - | chr1.1:15712350-15712369 | MS.gene33615:intron | 35.0% | |
| ATGATTGGATGCTTATGAGT+GGG | + | chr1.1:15710874-15710893 | None:intergenic | 35.0% | |
| ATTCAGATACCTAGTAGTTG+TGG | + | chr1.1:15709975-15709994 | None:intergenic | 35.0% | |
| ATTCCAAATGTGTGAAAGTG+GGG | - | chr1.1:15709946-15709965 | MS.gene33615:intron | 35.0% | |
| CAGTCTATTTATCTGTTAGG+GGG | - | chr1.1:15710064-15710083 | MS.gene33615:CDS | 35.0% | |
| CATCAAATGAGAATTTCCCA+TGG | + | chr1.1:15714673-15714692 | None:intergenic | 35.0% | |
| CATCTATAAGAGTTGTAGAG+GGG | - | chr1.1:15712349-15712368 | MS.gene33615:intron | 35.0% | |
| CGATGAAGATATTGTTAGGT+CGG | + | chr1.1:15709137-15709156 | None:intergenic | 35.0% | |
| CTATACAAGTACTTGTCAAC+TGG | - | chr1.1:15712566-15712585 | MS.gene33615:intron | 35.0% | |
| CTCATCTATAAGAGTTGTAG+AGG | - | chr1.1:15712347-15712366 | MS.gene33615:intron | 35.0% | |
| GAAAAACACGAAGTTATGAC+TGG | - | chr1.1:15708901-15708920 | MS.gene33615:CDS | 35.0% | |
| GAAATAGTATCTGAACCACT+TGG | - | chr1.1:15711853-15711872 | MS.gene33615:intron | 35.0% | |
| GACAAATATCACATGAACTC+AGG | - | chr1.1:15709102-15709121 | MS.gene33615:intron | 35.0% | |
| GATACTATTTCAGCTGAAGA+AGG | + | chr1.1:15711844-15711863 | None:intergenic | 35.0% | |
| GATTCATATTCCTTCCTGTT+GGG | - | chr1.1:15709779-15709798 | MS.gene33615:intron | 35.0% | |
| GGTATATGCTATTAAGTGTG+TGG | - | chr1.1:15711029-15711048 | MS.gene33615:intron | 35.0% | |
| GTGCTTCTAATCATCTGTAA+AGG | + | chr1.1:15711069-15711088 | None:intergenic | 35.0% | |
| TATGATTGGATGCTTATGAG+TGG | + | chr1.1:15710875-15710894 | None:intergenic | 35.0% | |
| TGATTTCCTGACTATTGCTT+AGG | - | chr1.1:15711541-15711560 | MS.gene33615:intron | 35.0% | |
| TGCATTACTGCAACAAAAGT+GGG | - | chr1.1:15712389-15712408 | MS.gene33615:intron | 35.0% | |
| TTAATTCGTACCGTGATGAT+GGG | + | chr1.1:15713605-15713624 | None:intergenic | 35.0% | |
| TTCTACTGTTGGGATATGAT+TGG | + | chr1.1:15710889-15710908 | None:intergenic | 35.0% | |
| TTGGATGATGACAAAGTTTC+TGG | - | chr1.1:15713356-15713375 | MS.gene33615:intron | 35.0% | |
| TTTGTTTCCTTTCTCGAAAC+AGG | - | chr1.1:15713870-15713889 | MS.gene33615:intron | 35.0% | |
| ! | ACATTCACTCAGATTTTCCT+AGG | + | chr1.1:15709350-15709369 | None:intergenic | 35.0% |
| ! | ACTATTGCTTAGGTTGTTGA+AGG | - | chr1.1:15711551-15711570 | MS.gene33615:intron | 35.0% |
| ! | ATCTTTGTATTGGTGTATGG+TGG | + | chr1.1:15714758-15714777 | None:intergenic | 35.0% |
| ! | ATTCATACTTTGCCTTTTGG+AGG | - | chr1.1:15714620-15714639 | MS.gene33615:intron | 35.0% |
| ! | CTATTGCTTAGGTTGTTGAA+GGG | - | chr1.1:15711552-15711571 | MS.gene33615:intron | 35.0% |
| ! | CTCATCTTTGTATTGGTGTA+TGG | + | chr1.1:15714761-15714780 | None:intergenic | 35.0% |
| ! | GCAATTCATACTTTGCCTTT+TGG | - | chr1.1:15714617-15714636 | MS.gene33615:intron | 35.0% |
| ! | GCTATAATTCGTGCCTTATT+TGG | - | chr1.1:15714815-15714834 | MS.gene33615:CDS | 35.0% |
| ! | GCTTTGATCATAGAGTTTTC+AGG | - | chr1.1:15712596-15712615 | MS.gene33615:intron | 35.0% |
| ! | TATGGGTCCAGATTTTATTG+GGG | - | chr1.1:15709243-15709262 | MS.gene33615:intron | 35.0% |
| ! | TCACACATTTGGAATATCAG+TGG | + | chr1.1:15709941-15709960 | None:intergenic | 35.0% |
| ! | TGCTATCATTCTAGTTACCT+TGG | - | chr1.1:15712991-15713010 | MS.gene33615:intron | 35.0% |
| ! | TGGGACAAAATTTTCTACAC+AGG | - | chr1.1:15712408-15712427 | MS.gene33615:intron | 35.0% |
| ! | TGTTGTTATTGTTGTGTGAC+TGG | - | chr1.1:15711461-15711480 | MS.gene33615:intron | 35.0% |
| ! | TTTTATAGTAGTGCACGTGA+GGG | - | chr1.1:15710400-15710419 | MS.gene33615:intron | 35.0% |
| !! | AATTGATGAGAGTGCTTGAT+TGG | - | chr1.1:15709281-15709300 | MS.gene33615:intron | 35.0% |
| !! | ATTGATGAGAGTGCTTGATT+GGG | - | chr1.1:15709282-15709301 | MS.gene33615:intron | 35.0% |
| !! | CACCAAATCAGCTTTTAAGT+TGG | - | chr1.1:15714142-15714161 | MS.gene33615:intron | 35.0% |
| !! | CTAGAAGTAGCTTTAAAACC+AGG | + | chr1.1:15714180-15714199 | None:intergenic | 35.0% |
| !! | GTTTCTGGTAAGATTGTTCA+TGG | - | chr1.1:15713371-15713390 | MS.gene33615:intron | 35.0% |
| !! | TAATTCGTGCCTTATTTGGA+AGG | - | chr1.1:15714819-15714838 | MS.gene33615:CDS | 35.0% |
| !! | TTTGTTAAGACTGTTTCTGC+TGG | - | chr1.1:15713988-15714007 | MS.gene33615:intron | 35.0% |
| !!! | AGTGGCCTTTTTTTCTTCAA+CGG | - | chr1.1:15714403-15714422 | MS.gene33615:intron | 35.0% |
| !!! | AGTGTGGGTTTTTTATGGTT+TGG | - | chr1.1:15709428-15709447 | MS.gene33615:intron | 35.0% |
| !!! | AGTTATTTTTACCCTTGGAC+AGG | - | chr1.1:15711263-15711282 | MS.gene33615:CDS | 35.0% |
| !!! | GATGTTTTGACCTGCATTAA+AGG | + | chr1.1:15711808-15711827 | None:intergenic | 35.0% |
| !!! | TCCCCTTTGGTTTTCTTTTA+TGG | - | chr1.1:15712444-15712463 | MS.gene33615:intron | 35.0% |
| !!! | TGTTTTGACCTGCATTAAAG+GGG | + | chr1.1:15711806-15711825 | None:intergenic | 35.0% |
| AACAACCAATTCACACTTGC+TGG | + | chr1.1:15711217-15711236 | None:intergenic | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | - | chr1.1:15710489-15710508 | MS.gene33615:intron | 40.0% | |
| ACACAATGTTGGATCGTCAA+TGG | + | chr1.1:15710135-15710154 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | - | chr1.1:15710490-15710509 | MS.gene33615:intron | 40.0% | |
| ACTGGATCAAGTGATAACAC+TGG | + | chr1.1:15712222-15712241 | None:intergenic | 40.0% | |
| AGAATAATCGCAGGAAAGTG+GGG | - | chr1.1:15713068-15713087 | MS.gene33615:intron | 40.0% | |
| AGATAATAACCGAACCTCGT+AGG | + | chr1.1:15709033-15709052 | None:intergenic | 40.0% | |
| AGATTGATGAAGGCTCTCAT+GGG | - | chr1.1:15714779-15714798 | MS.gene33615:CDS | 40.0% | |
| AGCATCTTAAGTGTCTCAAG+TGG | + | chr1.1:15710090-15710109 | None:intergenic | 40.0% | |
| AGCTTGGAGGGAAGAAAAAA+GGG | + | chr1.1:15711952-15711971 | None:intergenic | 40.0% | |
| AGTCTGAGTTGTGTAGTTAG+TGG | - | chr1.1:15711492-15711511 | MS.gene33615:intron | 40.0% | |
| ATACTCCAGCAAGTGTGAAT+TGG | - | chr1.1:15711209-15711228 | MS.gene33615:intron | 40.0% | |
| ATATATGCAGCAAGAGGCTT+CGG | + | chr1.1:15713937-15713956 | None:intergenic | 40.0% | |
| ATCAAAGATCTCCTAACCAG+TGG | + | chr1.1:15711154-15711173 | None:intergenic | 40.0% | |
| ATGATAGCAAGTACTCTCTG+TGG | + | chr1.1:15712980-15712999 | None:intergenic | 40.0% | |
| ATGATCAACACAACTCCAAG+TGG | + | chr1.1:15711871-15711890 | None:intergenic | 40.0% | |
| ATTCCCCACTTTCACACATT+TGG | + | chr1.1:15709952-15709971 | None:intergenic | 40.0% | |
| CAACAACCTAAGCAATAGTC+AGG | + | chr1.1:15711550-15711569 | None:intergenic | 40.0% | |
| CACTCAAGGAATTGAAGCAT+TGG | - | chr1.1:15711679-15711698 | MS.gene33615:intron | 40.0% | |
| CACTTAAGATGCTAGGTCTT+AGG | - | chr1.1:15710097-15710116 | MS.gene33615:CDS | 40.0% | |
| CACTTTAGATGTTCGGTCAT+AGG | - | chr1.1:15710172-15710191 | MS.gene33615:intron | 40.0% | |
| CAGTTATAGCAGCTCTATCA+CGG | + | chr1.1:15712129-15712148 | None:intergenic | 40.0% | |
| CATCATCACGGTACGAATTA+AGG | - | chr1.1:15713604-15713623 | MS.gene33615:intron | 40.0% | |
| CATGAATTCCCCTTTAATGC+AGG | - | chr1.1:15711795-15711814 | MS.gene33615:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr1.1:15710521-15710540 | MS.gene33615:CDS | 40.0% | |
| CTCATGTAAAACTGCACTCA+AGG | - | chr1.1:15711665-15711684 | MS.gene33615:intron | 40.0% | |
| CTCATTATCAGAGAATCACG+CGG | + | chr1.1:15713557-15713576 | None:intergenic | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | - | chr1.1:15710495-15710514 | MS.gene33615:intron | 40.0% | |
| CTGCATTACTGCAACAAAAG+TGG | - | chr1.1:15712388-15712407 | MS.gene33615:intron | 40.0% | |
| CTTAATTCGTACCGTGATGA+TGG | + | chr1.1:15713606-15713625 | None:intergenic | 40.0% | |
| CTTGAGACACTTAAGATGCT+AGG | - | chr1.1:15710090-15710109 | MS.gene33615:CDS | 40.0% | |
| GAAAGACGTGCCTACTAAAA+GGG | + | chr1.1:15710595-15710614 | None:intergenic | 40.0% | |
| GAAGAATAATCGCAGGAAAG+TGG | - | chr1.1:15713066-15713085 | MS.gene33615:intron | 40.0% | |
| GATTGTTCATGGAGGTGAAA+AGG | - | chr1.1:15713382-15713401 | MS.gene33615:intron | 40.0% | |
| GCAACTAGAAGAATAATCGC+AGG | - | chr1.1:15713059-15713078 | MS.gene33615:intron | 40.0% | |
| GGACATCCAATAGAACAGTA+GGG | + | chr1.1:15713535-15713554 | None:intergenic | 40.0% | |
| GGATTCATATTCCTTCCTGT+TGG | - | chr1.1:15709778-15709797 | MS.gene33615:intron | 40.0% | |
| GGGACCAATCTTCTACTTAT+AGG | - | chr1.1:15709486-15709505 | MS.gene33615:intron | 40.0% | |
| GGTGTAATTGCATTGCAGAT+TGG | - | chr1.1:15711630-15711649 | MS.gene33615:intron | 40.0% | |
| GTTCTGTTCTGTTGAATCCT+AGG | - | chr1.1:15709330-15709349 | MS.gene33615:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr1.1:15710446-15710465 | MS.gene33615:intron | 40.0% | |
| TACAAACGACAAGAAGCTCA+AGG | - | chr1.1:15713960-15713979 | MS.gene33615:intron | 40.0% | |
| TAGAGAATCCACCTAGGAAT+AGG | + | chr1.1:15713237-15713256 | None:intergenic | 40.0% | |
| TAGCTTGGAGGGAAGAAAAA+AGG | + | chr1.1:15711953-15711972 | None:intergenic | 40.0% | |
| TCATTATCAGAGAATCACGC+GGG | + | chr1.1:15713556-15713575 | None:intergenic | 40.0% | |
| TCCATTACTTCCCATCATCA+CGG | - | chr1.1:15713592-15713611 | MS.gene33615:intron | 40.0% | |
| TCTGGTAAGATTGTTCATGG+AGG | - | chr1.1:15713374-15713393 | MS.gene33615:intron | 40.0% | |
| TGAAAGACGTGCCTACTAAA+AGG | + | chr1.1:15710596-15710615 | None:intergenic | 40.0% | |
| TGCAAAAAATCCCAACAGGA+AGG | + | chr1.1:15709792-15709811 | None:intergenic | 40.0% | |
| TGCACGGAATAGACTCTATT+TGG | + | chr1.1:15710771-15710790 | None:intergenic | 40.0% | |
| TGTTATTGTTGTGTGACTGG+AGG | - | chr1.1:15711464-15711483 | MS.gene33615:intron | 40.0% | |
| TTATCGACCTGTTTCGAGAA+AGG | + | chr1.1:15713880-15713899 | None:intergenic | 40.0% | |
| TTTATAGTAGTGCACGTGAG+GGG | - | chr1.1:15710401-15710420 | MS.gene33615:intron | 40.0% | |
| ! | AGTCTTTAGAGAATCCACCT+AGG | + | chr1.1:15713243-15713262 | None:intergenic | 40.0% |
| ! | ATGGGTCCAGATTTTATTGG+GGG | - | chr1.1:15709244-15709263 | MS.gene33615:intron | 40.0% |
| ! | ATTGACAACACTAGCTTGGA+GGG | + | chr1.1:15711964-15711983 | None:intergenic | 40.0% |
| ! | CACTGAAAACGTACCTTTTC+CGG | + | chr1.1:15711711-15711730 | None:intergenic | 40.0% |
| ! | CGATCGCTTGATAAAGCTTT+TGG | - | chr1.1:15713337-15713356 | MS.gene33615:intron | 40.0% |
| ! | CTGAGAGAAACATTTGGTTC+TGG | - | chr1.1:15708879-15708898 | MS.gene33615:CDS | 40.0% |
| ! | CTTACCCTGTTTTACACAAG+AGG | + | chr1.1:15710497-15710516 | None:intergenic | 40.0% |
| ! | GATTAGCCCTACTGTTCTAT+TGG | - | chr1.1:15713526-15713545 | MS.gene33615:intron | 40.0% |
| ! | GCATTTATGCATCTGGAATG+TGG | - | chr1.1:15709809-15709828 | MS.gene33615:intron | 40.0% |
| ! | GTTTTATAGTAGTGCACGTG+AGG | - | chr1.1:15710399-15710418 | MS.gene33615:intron | 40.0% |
| ! | TGTATCTGGTTCAAAGTGAC+AGG | + | chr1.1:15712925-15712944 | None:intergenic | 40.0% |
| ! | TTCTCTTTGTTTCTCCCCTT+TGG | - | chr1.1:15712431-15712450 | MS.gene33615:intron | 40.0% |
| ! | TTGTGTTGATCATCTCTGCA+TGG | - | chr1.1:15711878-15711897 | MS.gene33615:intron | 40.0% |
| ! | TTTCTGGTGTGTGTACTGTT+CGG | - | chr1.1:15709390-15709409 | MS.gene33615:intron | 40.0% |
| !! | CAAGGAATTGAAGCATTGGA+TGG | - | chr1.1:15711683-15711702 | MS.gene33615:intron | 40.0% |
| !!! | AAGCTCCCTGTCTTCTTTTT+TGG | - | chr1.1:15713420-15713439 | MS.gene33615:intron | 40.0% |
| !!! | GTTGCAGTGTGGGTTTTTTA+TGG | - | chr1.1:15709423-15709442 | MS.gene33615:intron | 40.0% |
| !!! | TAGTGCGTCATAGTTTTGAC+TGG | - | chr1.1:15714545-15714564 | MS.gene33615:intron | 40.0% |
| AATTGAATGCACAGGACCAC+TGG | + | chr1.1:15711186-15711205 | None:intergenic | 45.0% | |
| ACCGTTCAATCTTGACCAAG+TGG | - | chr1.1:15709915-15709934 | MS.gene33615:intron | 45.0% | |
| AGAATCCACCTAGGAATAGG+AGG | + | chr1.1:15713234-15713253 | None:intergenic | 45.0% | |
| AGATGAGAATGAGATGCCAC+TGG | - | chr1.1:15711135-15711154 | MS.gene33615:intron | 45.0% | |
| AGTGTTAAGGTCCTGTCCAA+GGG | + | chr1.1:15711277-15711296 | None:intergenic | 45.0% | |
| ATTGGATGCTTATGAGTGGG+TGG | + | chr1.1:15710871-15710890 | None:intergenic | 45.0% | |
| CAACACAACTCCAAGTGGTT+CGG | + | chr1.1:15711771-15711790 | None:intergenic | 45.0% | |
| CAACTTTACCAATTGCGCCA+AGG | + | chr1.1:15710430-15710449 | None:intergenic | 45.0% | |
| CGTTGCTGGCAAAACTGTTA+GGG | - | chr1.1:15712310-15712329 | MS.gene33615:intron | 45.0% | |
| GACATAGTATCCGAACCACT+TGG | - | chr1.1:15711758-15711777 | MS.gene33615:CDS | 45.0% | |
| GAGATTGATGAAGGCTCTCA+TGG | - | chr1.1:15714778-15714797 | MS.gene33615:CDS | 45.0% | |
| GATTGATGCAACTGTCGTGT+TGG | + | chr1.1:15714484-15714503 | None:intergenic | 45.0% | |
| GCCACTTGGTCAAGATTGAA+CGG | + | chr1.1:15709919-15709938 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr1.1:15710520-15710539 | MS.gene33615:CDS | 45.0% | |
| GCTGCAATAGCTCCAATTAC+TGG | + | chr1.1:15712240-15712259 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr1.1:15710517-15710536 | MS.gene33615:CDS | 45.0% | |
| GCTTTATCAAGCGATCGAAG+TGG | + | chr1.1:15713334-15713353 | None:intergenic | 45.0% | |
| GGGACATCCAATAGAACAGT+AGG | + | chr1.1:15713536-15713555 | None:intergenic | 45.0% | |
| GTAATTGGAGCTATTGCAGC+TGG | - | chr1.1:15712240-15712259 | MS.gene33615:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr1.1:15710452-15710471 | MS.gene33615:intron | 45.0% | |
| GTGATCAACACAACTCCAAG+TGG | + | chr1.1:15711776-15711795 | None:intergenic | 45.0% | |
| GTGGCTGGAGAAATTTCTGA+TGG | + | chr1.1:15712285-15712304 | None:intergenic | 45.0% | |
| GTTGCTGGCAAAACTGTTAG+GGG | - | chr1.1:15712311-15712330 | MS.gene33615:intron | 45.0% | |
| TATCACATGAACTCAGGCGA+AGG | - | chr1.1:15709108-15709127 | MS.gene33615:intron | 45.0% | |
| TCGTTGCTGGCAAAACTGTT+AGG | - | chr1.1:15712309-15712328 | MS.gene33615:intron | 45.0% | |
| TCTCAGTTCATTCACCAGCA+TGG | + | chr1.1:15708865-15708884 | None:intergenic | 45.0% | |
| TGCGATTGACAACACTAGCT+TGG | + | chr1.1:15711968-15711987 | None:intergenic | 45.0% | |
| TGCTAGGTCTTAGGTGTTAG+AGG | - | chr1.1:15710106-15710125 | MS.gene33615:CDS | 45.0% | |
| TTGGAATATCAGTGGCCACT+TGG | + | chr1.1:15709933-15709952 | None:intergenic | 45.0% | |
| ! | AGAATGAGATGCCACTGGTT+AGG | - | chr1.1:15711140-15711159 | MS.gene33615:intron | 45.0% |
| ! | AGTTGGTTCTCAGCAATTCC+TGG | - | chr1.1:15714159-15714178 | MS.gene33615:intron | 45.0% |
| ! | GATTGACAACACTAGCTTGG+AGG | + | chr1.1:15711965-15711984 | None:intergenic | 45.0% |
| ! | GCTTAGGTTGTTGAAGGGTT+TGG | - | chr1.1:15711557-15711576 | MS.gene33615:intron | 45.0% |
| ! | GTTTGGTTCCTCCTATTCCT+AGG | - | chr1.1:15713223-15713242 | MS.gene33615:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr1.1:15710486-15710505 | None:intergenic | 45.0% |
| ! | TTTTGCCAGCAACGATGATG+TGG | + | chr1.1:15712304-15712323 | None:intergenic | 45.0% |
| !! | ACCGTGATGATGGGAAGTAA+TGG | + | chr1.1:15713596-15713615 | None:intergenic | 45.0% |
| !! | ACTTTGCCTTTTGGAGGAGT+AGG | - | chr1.1:15714626-15714645 | MS.gene33615:CDS | 45.0% |
| !! | ATTGAAGCATTGGATGGCTC+CGG | - | chr1.1:15711689-15711708 | MS.gene33615:intron | 45.0% |
| !! | CTTTGATGATGTGCAACCAG+TGG | - | chr1.1:15711167-15711186 | MS.gene33615:intron | 45.0% |
| !! | GTTAAGACTGTTTCTGCTGG+TGG | - | chr1.1:15713991-15714010 | MS.gene33615:intron | 45.0% |
| !!! | CTCCCTGTCTTCTTTTTTGG+AGG | - | chr1.1:15713423-15713442 | MS.gene33615:intron | 45.0% |
| AAACTGTCGCCTACGAGGTT+CGG | - | chr1.1:15709021-15709040 | MS.gene33615:CDS | 50.0% | |
| AACAGTAGGGCTAATCCTCC+TGG | + | chr1.1:15713522-15713541 | None:intergenic | 50.0% | |
| AAGAGTGGCACGCATTGTGA+TGG | - | chr1.1:15712720-15712739 | MS.gene33615:intron | 50.0% | |
| AAGGTCACGGATTCAAGTCC+TGG | - | chr1.1:15710465-15710484 | MS.gene33615:intron | 50.0% | |
| ACCAGAGGCCATTAAGTACG+AGG | + | chr1.1:15710981-15711000 | None:intergenic | 50.0% | |
| CCAGAGGCCATTAAGTACGA+GGG | + | chr1.1:15710980-15710999 | None:intergenic | 50.0% | |
| CGTAGGCGACAGTTTCAAGA+GGG | + | chr1.1:15709016-15709035 | None:intergenic | 50.0% | |
| CTCTCACCTACTCCTCCAAA+AGG | + | chr1.1:15714635-15714654 | None:intergenic | 50.0% | |
| GAGTGTTAAGGTCCTGTCCA+AGG | + | chr1.1:15711278-15711297 | None:intergenic | 50.0% | |
| GCAGTGACCCTCGTACTTAA+TGG | - | chr1.1:15710970-15710989 | MS.gene33615:intron | 50.0% | |
| GGAAAGTGGGGTTGCAACAA+TGG | - | chr1.1:15713080-15713099 | MS.gene33615:intron | 50.0% | |
| GTAGGCGACAGTTTCAAGAG+GGG | + | chr1.1:15709015-15709034 | None:intergenic | 50.0% | |
| GTGGGGAATCCACAACTACT+AGG | - | chr1.1:15709963-15709982 | MS.gene33615:intron | 50.0% | |
| TAGGCGACAGTTTCAAGAGG+GGG | + | chr1.1:15709014-15709033 | None:intergenic | 50.0% | |
| TATTGAAGCGGGATCCATGC+TGG | - | chr1.1:15708848-15708867 | MS.gene33615:CDS | 50.0% | |
| TCATGAAGACGAAGTCTGCG+TGG | - | chr1.1:15712626-15712645 | MS.gene33615:intron | 50.0% | |
| TCGTAGGCGACAGTTTCAAG+AGG | + | chr1.1:15709017-15709036 | None:intergenic | 50.0% | |
| TCTTGAAACTGTCGCCTACG+AGG | - | chr1.1:15709016-15709035 | MS.gene33615:CDS | 50.0% | |
| TGCCTACTAAAAGGGCAACC+CGG | + | chr1.1:15710587-15710606 | None:intergenic | 50.0% | |
| TGGTGGAAACGTTGCAGTGT+GGG | - | chr1.1:15709413-15709432 | MS.gene33615:intron | 50.0% | |
| TGGTTCCTCCTATTCCTAGG+TGG | - | chr1.1:15713226-15713245 | MS.gene33615:intron | 50.0% | |
| TGTTCGGTCATAGGTCTGAG+AGG | - | chr1.1:15710181-15710200 | MS.gene33615:intron | 50.0% | |
| TTGATGAAGGCTCTCATGGG+TGG | - | chr1.1:15714782-15714801 | MS.gene33615:CDS | 50.0% | |
| TTTGGAGGAGTAGGTGAGAG+TGG | - | chr1.1:15714635-15714654 | MS.gene33615:CDS | 50.0% | |
| ! | TATTGCAGCTGGTAACGCTG+TGG | - | chr1.1:15712251-15712270 | MS.gene33615:intron | 50.0% |
| !! | GACTGTTTCTGCTGGTGGTT+TGG | - | chr1.1:15713996-15714015 | MS.gene33615:intron | 50.0% |
| ACACCAGTTGTGCTGGAGCT+TGG | - | chr1.1:15712763-15712782 | MS.gene33615:intron | 55.0% | |
| ACTAGTGCTCCCGCATATGC+AGG | + | chr1.1:15710561-15710580 | None:intergenic | 55.0% | |
| AGCGGCTATAGCAGCACTCT+AGG | + | chr1.1:15712039-15712058 | None:intergenic | 55.0% | |
| AGGAGTAGGTGAGAGTGGAG+TGG | - | chr1.1:15714640-15714659 | MS.gene33615:CDS | 55.0% | |
| AGGGGTAACCTTGGCGCAAT+TGG | - | chr1.1:15710419-15710438 | MS.gene33615:intron | 55.0% | |
| AGTGGAGTGGGTGCATACCA+TGG | - | chr1.1:15714653-15714672 | MS.gene33615:CDS | 55.0% | |
| ATGAAGGCTCTCATGGGTGG+TGG | - | chr1.1:15714785-15714804 | MS.gene33615:CDS | 55.0% | |
| CCCTCGTACTTAATGGCCTC+TGG | - | chr1.1:15710977-15710996 | MS.gene33615:intron | 55.0% | |
| CTAGTGCTCCCGCATATGCA+GGG | + | chr1.1:15710560-15710579 | None:intergenic | 55.0% | |
| CTGGTGTGTGTACTGTTCGG+TGG | - | chr1.1:15709393-15709412 | MS.gene33615:intron | 55.0% | |
| GCACCTTACACCAGTTGTGC+TGG | - | chr1.1:15712756-15712775 | MS.gene33615:intron | 55.0% | |
| GCATTGGATGGCTCCGGAAA+AGG | - | chr1.1:15711695-15711714 | MS.gene33615:intron | 55.0% | |
| GCTCCAGCACAACTGGTGTA+AGG | + | chr1.1:15712762-15712781 | None:intergenic | 55.0% | |
| GGAGTAGGTGAGAGTGGAGT+GGG | - | chr1.1:15714641-15714660 | MS.gene33615:CDS | 55.0% | |
| GTGGAGTGGGTGCATACCAT+GGG | - | chr1.1:15714654-15714673 | MS.gene33615:CDS | 55.0% | |
| TCCAGCCACATCATCGTTGC+TGG | - | chr1.1:15712296-15712315 | MS.gene33615:intron | 55.0% | |
| ! | CACCGGGTTGCCCTTTTAGT+AGG | - | chr1.1:15710582-15710601 | MS.gene33615:CDS | 55.0% |
| ! | GTGGTGGAAACGTTGCAGTG+TGG | - | chr1.1:15709412-15709431 | MS.gene33615:intron | 55.0% |
| ! | GTGTGTGTACTGTTCGGTGG+TGG | - | chr1.1:15709396-15709415 | MS.gene33615:intron | 55.0% |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr1.1:15710548-15710567 | None:intergenic | 60.0% | |
| CCAGTTGTGCTGGAGCTTGG+AGG | - | chr1.1:15712766-15712785 | MS.gene33615:intron | 60.0% | |
| CCTCCAAGCTCCAGCACAAC+TGG | + | chr1.1:15712769-15712788 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr1.1:15710548-15710567 | MS.gene33615:CDS | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr1.1:15710549-15710568 | None:intergenic | 60.0% | |
| GCCAGCAACGATGATGTGGC+TGG | + | chr1.1:15712300-15712319 | None:intergenic | 60.0% | |
| GTGCACGTGAGGGGTAACCT+TGG | - | chr1.1:15710410-15710429 | MS.gene33615:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr1.1:15710549-15710568 | MS.gene33615:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr1.1:15710533-15710552 | MS.gene33615:CDS | 60.0% |
| !! | ATGCGGGAGCACTAGTGCAC+CGG | - | chr1.1:15710565-15710584 | MS.gene33615:CDS | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr1.1:15710550-15710569 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr1.1:15710535-15710554 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr1.1:15710554-15710573 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr1.1:15710555-15710574 | None:intergenic | 65.0% | |
| !! | TGCGGGAGCACTAGTGCACC+GGG | - | chr1.1:15710566-15710585 | MS.gene33615:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 15708813 | 15714847 | 15708813 | ID=MS.gene33615 |
| chr1.1 | mRNA | 15708813 | 15714847 | 15708813 | ID=MS.gene33615.t1;Parent=MS.gene33615 |
| chr1.1 | exon | 15714623 | 15714847 | 15714623 | ID=MS.gene33615.t1.exon1;Parent=MS.gene33615.t1 |
| chr1.1 | CDS | 15714623 | 15714847 | 15714623 | ID=cds.MS.gene33615.t1;Parent=MS.gene33615.t1 |
| chr1.1 | exon | 15711944 | 15712012 | 15711944 | ID=MS.gene33615.t1.exon2;Parent=MS.gene33615.t1 |
| chr1.1 | CDS | 15711944 | 15712012 | 15711944 | ID=cds.MS.gene33615.t1;Parent=MS.gene33615.t1 |
| chr1.1 | exon | 15711747 | 15711843 | 15711747 | ID=MS.gene33615.t1.exon3;Parent=MS.gene33615.t1 |
| chr1.1 | CDS | 15711747 | 15711843 | 15711747 | ID=cds.MS.gene33615.t1;Parent=MS.gene33615.t1 |
| chr1.1 | exon | 15711231 | 15711437 | 15711231 | ID=MS.gene33615.t1.exon4;Parent=MS.gene33615.t1 |
| chr1.1 | CDS | 15711231 | 15711437 | 15711231 | ID=cds.MS.gene33615.t1;Parent=MS.gene33615.t1 |
| chr1.1 | exon | 15710832 | 15710947 | 15710832 | ID=MS.gene33615.t1.exon5;Parent=MS.gene33615.t1 |
| chr1.1 | CDS | 15710832 | 15710947 | 15710832 | ID=cds.MS.gene33615.t1;Parent=MS.gene33615.t1 |
| chr1.1 | exon | 15710500 | 15710604 | 15710500 | ID=MS.gene33615.t1.exon6;Parent=MS.gene33615.t1 |
| chr1.1 | CDS | 15710500 | 15710604 | 15710500 | ID=cds.MS.gene33615.t1;Parent=MS.gene33615.t1 |
| chr1.1 | exon | 15710243 | 15710415 | 15710243 | ID=MS.gene33615.t1.exon7;Parent=MS.gene33615.t1 |
| chr1.1 | CDS | 15710243 | 15710415 | 15710243 | ID=cds.MS.gene33615.t1;Parent=MS.gene33615.t1 |
| chr1.1 | exon | 15710047 | 15710137 | 15710047 | ID=MS.gene33615.t1.exon8;Parent=MS.gene33615.t1 |
| chr1.1 | CDS | 15710047 | 15710137 | 15710047 | ID=cds.MS.gene33615.t1;Parent=MS.gene33615.t1 |
| chr1.1 | exon | 15709619 | 15709768 | 15709619 | ID=MS.gene33615.t1.exon9;Parent=MS.gene33615.t1 |
| chr1.1 | CDS | 15709619 | 15709768 | 15709619 | ID=cds.MS.gene33615.t1;Parent=MS.gene33615.t1 |
| chr1.1 | exon | 15708813 | 15709046 | 15708813 | ID=MS.gene33615.t1.exon10;Parent=MS.gene33615.t1 |
| chr1.1 | CDS | 15708813 | 15709046 | 15708813 | ID=cds.MS.gene33615.t1;Parent=MS.gene33615.t1 |
| Gene Sequence |
| Protein sequence |