Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33782.t1 | XP_013457056.1 | 97.1 | 453 | 11 | 1 | 1 | 453 | 1 | 451 | 1.00E-250 | 875.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33782.t1 | Q680U9 | 74.3 | 452 | 114 | 1 | 1 | 452 | 1 | 450 | 7.1e-200 | 698.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33782.t1 | G7ZZ96 | 97.1 | 453 | 11 | 1 | 1 | 453 | 1 | 451 | 7.4e-251 | 875.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051744 | MS.gene33782 | 0.800182 | 1.62E-48 | -1.69E-46 |
| MS.gene052488 | MS.gene33782 | 0.862961 | 3.50E-64 | -1.69E-46 |
| MS.gene054576 | MS.gene33782 | 0.806083 | 9.77E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene33782 | 0.826259 | 2.99E-54 | -1.69E-46 |
| MS.gene056173 | MS.gene33782 | 0.807104 | 5.95E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene33782 | 0.81517 | 1.06E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76435 | MS.gene33782 | PPI |
| MS.gene038754 | MS.gene33782 | PPI |
| MS.gene33782 | MS.gene012032 | PPI |
| MS.gene032967 | MS.gene33782 | PPI |
| MS.gene89597 | MS.gene33782 | PPI |
| MS.gene33782 | MS.gene80729 | PPI |
| MS.gene33782 | MS.gene044565 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33782.t1 | MTR_3g072660 | 97.130 | 453 | 12 | 1 | 1 | 453 | 1 | 452 | 0.0 | 909 |
| MS.gene33782.t1 | MTR_4g088935 | 97.130 | 453 | 11 | 1 | 1 | 453 | 1 | 451 | 0.0 | 908 |
| MS.gene33782.t1 | MTR_3g072660 | 95.585 | 453 | 12 | 2 | 1 | 453 | 1 | 445 | 0.0 | 887 |
| MS.gene33782.t1 | MTR_3g072660 | 96.623 | 385 | 12 | 1 | 1 | 385 | 1 | 384 | 0.0 | 763 |
| MS.gene33782.t1 | MTR_3g072660 | 94.805 | 385 | 12 | 2 | 1 | 385 | 1 | 377 | 0.0 | 742 |
| MS.gene33782.t1 | MTR_3g072660 | 96.648 | 358 | 11 | 1 | 1 | 358 | 1 | 357 | 0.0 | 708 |
| MS.gene33782.t1 | MTR_3g072660 | 99.083 | 327 | 3 | 0 | 127 | 453 | 1 | 327 | 0.0 | 675 |
| MS.gene33782.t1 | MTR_3g072660 | 96.942 | 327 | 3 | 1 | 127 | 453 | 1 | 320 | 0.0 | 654 |
| MS.gene33782.t1 | MTR_3g072660 | 96.309 | 298 | 10 | 1 | 1 | 298 | 1 | 297 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33782.t1 | AT4G17020 | 74.336 | 452 | 114 | 1 | 1 | 452 | 1 | 450 | 0.0 | 723 |
| MS.gene33782.t1 | AT4G17020 | 74.336 | 452 | 114 | 1 | 1 | 452 | 1 | 450 | 0.0 | 722 |
| MS.gene33782.t1 | AT4G17020 | 74.336 | 452 | 114 | 1 | 1 | 452 | 1 | 450 | 0.0 | 720 |
Find 90 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCACTTTCAGTTAATTT+TGG | 0.182729 | 4.4:-23790347 | None:intergenic |
| GAGAATGGAATGGTTTATTA+TGG | 0.208075 | 4.4:+23793800 | MS.gene33782:CDS |
| TGTAGCTTTCTTACTACTTT+TGG | 0.229854 | 4.4:-23793894 | None:intergenic |
| ACCTGTGCCGGCTAAATTAT+TGG | 0.265931 | 4.4:+23788780 | MS.gene33782:CDS |
| ATTTCAGAGGAACATAATTA+AGG | 0.312303 | 4.4:+23790850 | MS.gene33782:CDS |
| CTCCTTTCTTGATGATGATT+CGG | 0.327686 | 4.4:-23791100 | None:intergenic |
| CAATGTTGCCATTGATAGAT+TGG | 0.332658 | 4.4:+23788837 | MS.gene33782:CDS |
| GATCATTGCCAAGAATTTCA+TGG | 0.333040 | 4.4:+23788291 | MS.gene33782:CDS |
| CACCATGTCCATGAAATTCT+TGG | 0.335342 | 4.4:-23788299 | None:intergenic |
| GGCTAAATTATTGGCGGAAT+GGG | 0.342205 | 4.4:+23788789 | MS.gene33782:CDS |
| CACAGCTTTGGTACATCATC+AGG | 0.346440 | 4.4:+23790479 | MS.gene33782:CDS |
| CAACTTCCAAATCTTATTGT+TGG | 0.350456 | 4.4:+23792850 | MS.gene33782:CDS |
| AATTATGTTCCTCTGAAATT+CGG | 0.351671 | 4.4:-23790846 | None:intergenic |
| ATAGCTCCAACAATAAGATT+TGG | 0.356315 | 4.4:-23792856 | None:intergenic |
| GTAGAGTTTATCGAGTTTGA+TGG | 0.382908 | 4.4:-23788335 | None:intergenic |
| TGTGAGGCTCCCAACATTAG+AGG | 0.387289 | 4.4:+23789876 | MS.gene33782:CDS |
| TTACAGTTATTGCATATTGA+TGG | 0.396001 | 4.4:+23788757 | MS.gene33782:CDS |
| AGAATGGAATGGTTTATTAT+GGG | 0.397970 | 4.4:+23793801 | MS.gene33782:CDS |
| TGCAGATAGTCAGTTTCTTT+CGG | 0.401425 | 4.4:+23793448 | MS.gene33782:intron |
| TGGGCTGGTCAAACTTCAAC+AGG | 0.402831 | 4.4:+23790886 | MS.gene33782:CDS |
| CAAAGAAGAGCTTATGTTGA+AGG | 0.407543 | 4.4:-23790157 | None:intergenic |
| TTGTGCTTTGATAGTCCATC+TGG | 0.412236 | 4.4:-23788817 | None:intergenic |
| GCTCCAAAATTAACTGAAAG+TGG | 0.432592 | 4.4:+23790344 | MS.gene33782:CDS |
| AAATCAAAATGCCTGAGGTT+AGG | 0.443637 | 4.4:+23788269 | None:intergenic |
| TAATAAACCATTCCATTCTC+TGG | 0.444435 | 4.4:-23793797 | None:intergenic |
| GCCTGAAAATGTCACAGATC+AGG | 0.448319 | 4.4:+23793512 | MS.gene33782:CDS |
| GCCAATAATTTAGCCGGCAC+AGG | 0.449508 | 4.4:-23788781 | None:intergenic |
| CGGCTAAATTATTGGCGGAA+TGG | 0.450685 | 4.4:+23788788 | MS.gene33782:CDS |
| AGATTCAAAGAAGATGCATT+TGG | 0.453803 | 4.4:+23793825 | MS.gene33782:CDS |
| TTAAGGACCTTGCAGACCTT+GGG | 0.454174 | 4.4:+23790867 | MS.gene33782:CDS |
| ATTAAGGACCTTGCAGACCT+TGG | 0.455377 | 4.4:+23790866 | MS.gene33782:CDS |
| GACTTATGCTCTGGAACAAT+GGG | 0.456255 | 4.4:+23789906 | MS.gene33782:CDS |
| CGTGTGACTGCGCCAGAGAA+TGG | 0.459544 | 4.4:+23793785 | MS.gene33782:CDS |
| AAGGTCTTGTCAACATGACT+TGG | 0.470934 | 4.4:-23790138 | None:intergenic |
| GTCTCAAGATCCTCTAATGT+TGG | 0.472624 | 4.4:-23789886 | None:intergenic |
| TTGAAGCTCTTGACAATGAC+AGG | 0.474245 | 4.4:+23788878 | MS.gene33782:CDS |
| AGCCTCACAGTAATATTAGA+AGG | 0.477881 | 4.4:-23789862 | None:intergenic |
| TCAAAGTTGCTTACCCTGGA+TGG | 0.478380 | 4.4:-23793676 | None:intergenic |
| TCTCAAGATCCTCTAATGTT+GGG | 0.478745 | 4.4:-23789885 | None:intergenic |
| TATAGGGCAGGAAAGAAAGT+TGG | 0.482264 | 4.4:+23791034 | MS.gene33782:intron |
| CATTCCGCCAATAATTTAGC+CGG | 0.493364 | 4.4:-23788787 | None:intergenic |
| AGACTTATGCTCTGGAACAA+TGG | 0.494366 | 4.4:+23789905 | MS.gene33782:CDS |
| TCTCCTTCTTGCAGGAAGAT+CGG | 0.500349 | 4.4:+23789423 | MS.gene33782:intron |
| TGGATACAAATGCACAGCTT+TGG | 0.501549 | 4.4:+23790467 | MS.gene33782:CDS |
| ATAAACAGAACCTCTGACTC+AGG | 0.514589 | 4.4:-23790203 | None:intergenic |
| CAATTGAACCAATCTATCAA+TGG | 0.514654 | 4.4:-23788845 | None:intergenic |
| TCATCTGCGAAGCTATTCTC+AGG | 0.530426 | 4.4:+23788368 | MS.gene33782:CDS |
| TGCCAAGAATTTCATGGACA+TGG | 0.531687 | 4.4:+23788297 | MS.gene33782:CDS |
| GGATCTTGAGACTTATGCTC+TGG | 0.535259 | 4.4:+23789897 | MS.gene33782:CDS |
| GTGGTGACAGATTAGGTTGT+GGG | 0.535695 | 4.4:+23793600 | MS.gene33782:intron |
| GGACCTTGCAGACCTTGGGC+TGG | 0.536902 | 4.4:+23790871 | MS.gene33782:CDS |
| TTCAAAGAAGATGCATTTGG+TGG | 0.539081 | 4.4:+23793828 | MS.gene33782:CDS |
| GTGTGGCAGGATGTATTTGA+AGG | 0.539271 | 4.4:+23793760 | MS.gene33782:intron |
| TCTGACTCAGGAGACGCCGC+TGG | 0.540398 | 4.4:-23790191 | None:intergenic |
| AGGTCTTGTCAACATGACTT+GGG | 0.546852 | 4.4:-23790137 | None:intergenic |
| GACCGAATCATCATCAAGAA+AGG | 0.546881 | 4.4:+23791098 | MS.gene33782:CDS |
| CAATGGCATTACAGCAGACC+AGG | 0.547595 | 4.4:+23792909 | MS.gene33782:CDS |
| ATTATGACGAGTTCCCATCC+AGG | 0.551997 | 4.4:+23793662 | MS.gene33782:CDS |
| AACACATATTTCTTTGCAAG+AGG | 0.556398 | 4.4:-23788736 | None:intergenic |
| CAGGAGAGAGGTGTTGATGC+AGG | 0.559845 | 4.4:+23790600 | MS.gene33782:intron |
| TGACTTGATATCATTCATGC+TGG | 0.561348 | 4.4:+23790623 | MS.gene33782:CDS |
| GCGGAATGGGTGCTTCCAGA+TGG | 0.565096 | 4.4:+23788802 | MS.gene33782:CDS |
| GCATTTGGTGGTCAAGTCTG+AGG | 0.565644 | 4.4:+23793840 | MS.gene33782:CDS |
| AATTACACTGTGAGATATTG+CGG | 0.567848 | 4.4:+23792495 | MS.gene33782:CDS |
| CAAAGTTGCTTACCCTGGAT+GGG | 0.570298 | 4.4:-23793675 | None:intergenic |
| TTAGAAGGCATTGATTCCCT+CGG | 0.574898 | 4.4:-23789847 | None:intergenic |
| TCATCCTCGTGTTGCACAGA+GGG | 0.581937 | 4.4:+23793479 | MS.gene33782:CDS |
| AGTTTATCGAGTTTGATGGC+AGG | 0.583098 | 4.4:-23788331 | None:intergenic |
| TTGGCAATGATCCTAACCTC+AGG | 0.587350 | 4.4:-23788280 | None:intergenic |
| GGTGGTGACAGATTAGGTTG+TGG | 0.588257 | 4.4:+23793599 | MS.gene33782:intron |
| GCATATTGATGGACCTGTGC+CGG | 0.588398 | 4.4:+23788768 | MS.gene33782:CDS |
| AGCGGCGTCTCCTGAGTCAG+AGG | 0.589108 | 4.4:+23790193 | MS.gene33782:CDS |
| GTTGAAGTTTGACCAGCCCA+AGG | 0.597505 | 4.4:-23790883 | None:intergenic |
| CAAGAATTTCATGGACATGG+TGG | 0.599325 | 4.4:+23788300 | MS.gene33782:CDS |
| TTATGACGAGTTCCCATCCA+GGG | 0.606538 | 4.4:+23793663 | MS.gene33782:CDS |
| TGACCAGCCCAAGGTCTGCA+AGG | 0.612502 | 4.4:-23790874 | None:intergenic |
| CGAATCATCATCAAGAAAGG+AGG | 0.616443 | 4.4:+23791101 | MS.gene33782:CDS |
| ACATATTTCTTTGCAAGAGG+CGG | 0.617514 | 4.4:-23788733 | None:intergenic |
| ACACATTGACCGAATTTCAG+AGG | 0.620159 | 4.4:+23790837 | MS.gene33782:CDS |
| TGTGCCGGCTAAATTATTGG+CGG | 0.623227 | 4.4:+23788783 | MS.gene33782:CDS |
| TTATGCTCTGGAACAATGGG+AGG | 0.625310 | 4.4:+23789909 | MS.gene33782:CDS |
| GGAATATATCACTAATTCTG+AGG | 0.632294 | 4.4:+23790501 | MS.gene33782:CDS |
| TGGCAGTGGAACTTTGCCGA+GGG | 0.654665 | 4.4:+23789831 | MS.gene33782:intron |
| ATGGCAGTGGAACTTTGCCG+AGG | 0.657791 | 4.4:+23789830 | MS.gene33782:intron |
| ACAGCTTTGGTACATCATCA+GGG | 0.675051 | 4.4:+23790480 | MS.gene33782:CDS |
| CTCATCCTCGTGTTGCACAG+AGG | 0.680297 | 4.4:+23793478 | MS.gene33782:CDS |
| AAACGAAATCAAAATGCCTG+AGG | 0.682481 | 4.4:+23788264 | None:intergenic |
| GGTACCCTCTGTGCAACACG+AGG | 0.694512 | 4.4:-23793483 | None:intergenic |
| TGCCTTCTAATATTACTGTG+AGG | 0.698083 | 4.4:+23789860 | MS.gene33782:CDS |
| GACTGCGCCAGAGAATGGAA+TGG | 0.724470 | 4.4:+23793790 | MS.gene33782:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAATTTATTACATTAG+CGG | + | chr4.4:23791717-23791736 | MS.gene33782:intron | 10.0% |
| !! | AAAAAGAAAGAAGAAATATA+AGG | - | chr4.4:23791910-23791929 | None:intergenic | 15.0% |
| !! | CAAAGAAAAAAAAAAAGAAT+GGG | - | chr4.4:23791415-23791434 | None:intergenic | 15.0% |
| !! | GAATAATATACATAATCAAA+AGG | - | chr4.4:23789301-23789320 | None:intergenic | 15.0% |
| !! | TATAAGTACAAGATAAATTA+AGG | - | chr4.4:23792686-23792705 | None:intergenic | 15.0% |
| !! | TTAAGTTAAAAACATCATTA+AGG | + | chr4.4:23793326-23793345 | MS.gene33782:intron | 15.0% |
| !!! | AAAACAAATCAATTTTGAAA+CGG | - | chr4.4:23791135-23791154 | None:intergenic | 15.0% |
| !!! | CATTCTATTTAATTTTTTCA+GGG | + | chr4.4:23792422-23792441 | MS.gene33782:intron | 15.0% |
| !!! | TCATTCTATTTAATTTTTTC+AGG | + | chr4.4:23792421-23792440 | MS.gene33782:intron | 15.0% |
| !!! | TTATTTTGCTTTTTAAATTG+TGG | + | chr4.4:23792955-23792974 | MS.gene33782:intron | 15.0% |
| !! | AATAAGATGAAAACAACTTA+TGG | + | chr4.4:23788533-23788552 | MS.gene33782:intron | 20.0% |
| !! | ACTGCTAATGTAAAAAATAT+AGG | - | chr4.4:23791752-23791771 | None:intergenic | 20.0% |
| !! | AGAAAAAAAATACTAAACTG+GGG | - | chr4.4:23789406-23789425 | None:intergenic | 20.0% |
| !! | ATTAAATTGCAGTTACAAAA+GGG | - | chr4.4:23790765-23790784 | None:intergenic | 20.0% |
| !! | CTTACAAATCATAAAATGAT+AGG | + | chr4.4:23788704-23788723 | MS.gene33782:intron | 20.0% |
| !! | GAGAAAAAAAATACTAAACT+GGG | - | chr4.4:23789407-23789426 | None:intergenic | 20.0% |
| !! | GCAAAGAAAAAAAAAAAGAA+TGG | - | chr4.4:23791416-23791435 | None:intergenic | 20.0% |
| !! | TATAATTTCTAATACTTACC+TGG | - | chr4.4:23792930-23792949 | None:intergenic | 20.0% |
| !! | TATATTATATGCCTAATCAT+TGG | - | chr4.4:23790816-23790835 | None:intergenic | 20.0% |
| !! | TGATAGAAATAGCTTAATTA+AGG | - | chr4.4:23788445-23788464 | None:intergenic | 20.0% |
| !! | TTCACCAAAATATTATTGTT+TGG | + | chr4.4:23792748-23792767 | MS.gene33782:intron | 20.0% |
| !!! | AAAAAGTTCTAAAACAAGAT+TGG | - | chr4.4:23791591-23791610 | None:intergenic | 20.0% |
| !!! | AAGACCAAACAATAATATTT+TGG | - | chr4.4:23792755-23792774 | None:intergenic | 20.0% |
| !!! | AATTTTGTTCATGTGTATAT+AGG | + | chr4.4:23791993-23792012 | MS.gene33782:intron | 20.0% |
| !!! | ACAGCATTTTTATAATTTCA+TGG | - | chr4.4:23789680-23789699 | None:intergenic | 20.0% |
| !!! | ACTTTAAGAAAATTCAAGAA+CGG | - | chr4.4:23789234-23789253 | None:intergenic | 20.0% |
| !!! | CAATAATATTTTGGTGAAAT+AGG | - | chr4.4:23792746-23792765 | None:intergenic | 20.0% |
| !!! | CTTTTTTTCACAACTTTATA+GGG | + | chr4.4:23791018-23791037 | MS.gene33782:intron | 20.0% |
| !!! | GAATTTTCTTAAAGTTTATG+AGG | + | chr4.4:23789239-23789258 | MS.gene33782:intron | 20.0% |
| !!! | TAATCTTTTTTGTTAGTAGA+TGG | + | chr4.4:23791544-23791563 | MS.gene33782:intron | 20.0% |
| !!! | TCTTTTTTTCACAACTTTAT+AGG | + | chr4.4:23791017-23791036 | MS.gene33782:intron | 20.0% |
| !!! | TGAAGATTTTATTCAAATGA+AGG | - | chr4.4:23793134-23793153 | None:intergenic | 20.0% |
| !!! | TTCATATGAATTTTGAATTC+AGG | - | chr4.4:23789715-23789734 | None:intergenic | 20.0% |
| !!! | TTTTCTGATATGTAGTATTA+TGG | + | chr4.4:23793578-23793597 | MS.gene33782:intron | 20.0% |
| !!! | TTTTGAGACAAATCATATAA+TGG | + | chr4.4:23788630-23788649 | MS.gene33782:intron | 20.0% |
| ! | AAAAGTGGAATCAAAAGAAA+AGG | - | chr4.4:23789942-23789961 | None:intergenic | 25.0% |
| ! | AACAAACCTATATAGACAAT+GGG | + | chr4.4:23789646-23789665 | MS.gene33782:intron | 25.0% |
| ! | AATATCTAATAGTGAGTAGT+TGG | + | chr4.4:23792807-23792826 | MS.gene33782:intron | 25.0% |
| ! | AGAATGGAATGGTTTATTAT+GGG | + | chr4.4:23793801-23793820 | MS.gene33782:CDS | 25.0% |
| ! | ATAAAATCGTTAATACGAGT+GGG | + | chr4.4:23789588-23789607 | MS.gene33782:intron | 25.0% |
| ! | ATCATGTCATCAAAATGAAA+AGG | + | chr4.4:23791940-23791959 | MS.gene33782:intron | 25.0% |
| ! | ATGTACCTTAATAGAAACAA+GGG | - | chr4.4:23789570-23789589 | None:intergenic | 25.0% |
| ! | ATTTCAGAGGAACATAATTA+AGG | + | chr4.4:23790850-23790869 | MS.gene33782:CDS | 25.0% |
| ! | CATTAAATTGCAGTTACAAA+AGG | - | chr4.4:23790766-23790785 | None:intergenic | 25.0% |
| ! | CATTTGAATAAAATCTTCAC+TGG | + | chr4.4:23793135-23793154 | MS.gene33782:intron | 25.0% |
| ! | CTTTAATATCTTTCTACCTT+AGG | + | chr4.4:23793250-23793269 | MS.gene33782:intron | 25.0% |
| ! | GAATTTCTATGTTTCTTTGT+TGG | - | chr4.4:23793287-23793306 | None:intergenic | 25.0% |
| ! | GATAATTCTACACATATAAG+TGG | - | chr4.4:23789187-23789206 | None:intergenic | 25.0% |
| ! | GGAGAAAAAAAATACTAAAC+TGG | - | chr4.4:23789408-23789427 | None:intergenic | 25.0% |
| ! | TAACAAACCTATATAGACAA+TGG | + | chr4.4:23789645-23789664 | MS.gene33782:intron | 25.0% |
| ! | TATGTACCTTAATAGAAACA+AGG | - | chr4.4:23789571-23789590 | None:intergenic | 25.0% |
| ! | TGTAGAAAACTAATGTTTGT+CGG | + | chr4.4:23792197-23792216 | MS.gene33782:intron | 25.0% |
| ! | TGTTAGTAGATGGATAAAAA+AGG | + | chr4.4:23791554-23791573 | MS.gene33782:intron | 25.0% |
| ! | TTACAGTTATTGCATATTGA+TGG | + | chr4.4:23788757-23788776 | MS.gene33782:CDS | 25.0% |
| ! | TTTAATAGAAAGTTTAGACG+TGG | + | chr4.4:23791158-23791177 | MS.gene33782:intron | 25.0% |
| !! | AAACCACTTTCAGTTAATTT+TGG | - | chr4.4:23790350-23790369 | None:intergenic | 25.0% |
| !! | AAGCTTTATAGCTGAATTAA+TGG | - | chr4.4:23792716-23792735 | None:intergenic | 25.0% |
| !! | ACTTGTATGTCTAAATCTTT+TGG | + | chr4.4:23793223-23793242 | MS.gene33782:intron | 25.0% |
| !! | ATATGGTTTAGATGATCTTT+TGG | + | chr4.4:23792033-23792052 | MS.gene33782:intron | 25.0% |
| !! | CTGCTACTTATAAGTTATAA+AGG | - | chr4.4:23793066-23793085 | None:intergenic | 25.0% |
| !! | TAAGGTGTTTAATGAAAACA+TGG | - | chr4.4:23788427-23788446 | None:intergenic | 25.0% |
| !! | TATGGTTTAGATGATCTTTT+GGG | + | chr4.4:23792034-23792053 | MS.gene33782:intron | 25.0% |
| !! | TTCAAATTTGACTTCTGTAA+AGG | + | chr4.4:23793037-23793056 | MS.gene33782:intron | 25.0% |
| !! | TTCAGAAACTTTTAGTACAT+GGG | + | chr4.4:23789484-23789503 | MS.gene33782:CDS | 25.0% |
| !! | TTGTATAATGCTTTTGACAA+TGG | + | chr4.4:23792892-23792911 | MS.gene33782:CDS | 25.0% |
| !! | TTGTCTTCTTTTTCTTTTCA+TGG | + | chr4.4:23789523-23789542 | MS.gene33782:intron | 25.0% |
| !!! | AAACTGGAAGTTGTTTTTTA+TGG | + | chr4.4:23792642-23792661 | MS.gene33782:intron | 25.0% |
| !!! | AATTATGTTCCTCTGAAATT+CGG | - | chr4.4:23790849-23790868 | None:intergenic | 25.0% |
| !!! | AGATTTGTTGCTAATTTTGT+TGG | - | chr4.4:23791066-23791085 | None:intergenic | 25.0% |
| !!! | TATTCACTTTTCTCCTATTA+AGG | + | chr4.4:23788401-23788420 | MS.gene33782:intron | 25.0% |
| !!! | TTTTTTTCCTTCCAATGATT+AGG | + | chr4.4:23790802-23790821 | MS.gene33782:intron | 25.0% |
| AACACATATTTCTTTGCAAG+AGG | - | chr4.4:23788739-23788758 | None:intergenic | 30.0% | |
| AATCAAAAAAGCCATAACAG+GGG | - | chr4.4:23793727-23793746 | None:intergenic | 30.0% | |
| AATTACACTGTGAGATATTG+CGG | + | chr4.4:23792495-23792514 | MS.gene33782:CDS | 30.0% | |
| AGATGCAGAATGATTTAACT+TGG | + | chr4.4:23790954-23790973 | MS.gene33782:intron | 30.0% | |
| AGATTCAAAGAAGATGCATT+TGG | + | chr4.4:23793825-23793844 | MS.gene33782:CDS | 30.0% | |
| ATAACATGTCAATCGTTCAT+TGG | + | chr4.4:23792294-23792313 | MS.gene33782:intron | 30.0% | |
| ATAGAGACAGATAACTGTTA+CGG | - | chr4.4:23790530-23790549 | None:intergenic | 30.0% | |
| ATAGCTCCAACAATAAGATT+TGG | - | chr4.4:23792859-23792878 | None:intergenic | 30.0% | |
| ATATGTATGGAAGTTTCTGT+TGG | + | chr4.4:23792132-23792151 | MS.gene33782:intron | 30.0% | |
| ATTTATTACATTAGCGGTGT+TGG | + | chr4.4:23791723-23791742 | MS.gene33782:intron | 30.0% | |
| ATTTGATGCATACCAAAAAC+TGG | - | chr4.4:23790373-23790392 | None:intergenic | 30.0% | |
| CAACTTCCAAATCTTATTGT+TGG | + | chr4.4:23792850-23792869 | MS.gene33782:CDS | 30.0% | |
| CAATTGAACCAATCTATCAA+TGG | - | chr4.4:23788848-23788867 | None:intergenic | 30.0% | |
| CATAAAATCGTTAATACGAG+TGG | + | chr4.4:23789587-23789606 | MS.gene33782:intron | 30.0% | |
| CTACTTAAGTAAGTACTTGT+GGG | - | chr4.4:23788576-23788595 | None:intergenic | 30.0% | |
| GAATCAAAAAAGCCATAACA+GGG | - | chr4.4:23793728-23793747 | None:intergenic | 30.0% | |
| GAGAATGGAATGGTTTATTA+TGG | + | chr4.4:23793800-23793819 | MS.gene33782:CDS | 30.0% | |
| GGAATATATCACTAATTCTG+AGG | + | chr4.4:23790501-23790520 | MS.gene33782:CDS | 30.0% | |
| GTTGGAAAAATGATAACCTA+AGG | - | chr4.4:23793269-23793288 | None:intergenic | 30.0% | |
| TAAAATCTTCACTGGTGAAT+TGG | + | chr4.4:23793143-23793162 | MS.gene33782:intron | 30.0% | |
| TAATAAACCATTCCATTCTC+TGG | - | chr4.4:23793800-23793819 | None:intergenic | 30.0% | |
| TCATTGCAGAAAATATTTCG+CGG | - | chr4.4:23792537-23792556 | None:intergenic | 30.0% | |
| TCTACTTAAGTAAGTACTTG+TGG | - | chr4.4:23788577-23788596 | None:intergenic | 30.0% | |
| TCTGATATGTAGTATTATGG+TGG | + | chr4.4:23793581-23793600 | MS.gene33782:intron | 30.0% | |
| TCTTAAAGTTTATGAGGAAC+AGG | + | chr4.4:23789245-23789264 | MS.gene33782:intron | 30.0% | |
| TGCATTACATTAAGTTCAAG+TGG | - | chr4.4:23790406-23790425 | None:intergenic | 30.0% | |
| TGTACAGAGTAAACAAAAAG+TGG | - | chr4.4:23789957-23789976 | None:intergenic | 30.0% | |
| TTAACTCGTAATACGTGATA+TGG | - | chr4.4:23789628-23789647 | None:intergenic | 30.0% | |
| TTAGACATACAAGTATATCG+TGG | - | chr4.4:23793217-23793236 | None:intergenic | 30.0% | |
| TTATATGCCTAATCATTGGA+AGG | - | chr4.4:23790812-23790831 | None:intergenic | 30.0% | |
| TTCAAATGAAGGATTGAAGT+CGG | - | chr4.4:23793123-23793142 | None:intergenic | 30.0% | |
| TTGTTATGAATTACAGCTGA+TGG | + | chr4.4:23790447-23790466 | MS.gene33782:intron | 30.0% | |
| ! | AATCAGTCTGAAGTAGTAAA+AGG | - | chr4.4:23792269-23792288 | None:intergenic | 30.0% |
| ! | AATGAAAACATGGCCTTAAT+AGG | - | chr4.4:23788417-23788436 | None:intergenic | 30.0% |
| ! | ATGGTTTAGATGATCTTTTG+GGG | + | chr4.4:23792035-23792054 | MS.gene33782:intron | 30.0% |
| ! | CTTCAGAAACTTTTAGTACA+TGG | + | chr4.4:23789483-23789502 | MS.gene33782:CDS | 30.0% |
| ! | GTTTTCTACAAGTTGTAGTA+TGG | - | chr4.4:23792187-23792206 | None:intergenic | 30.0% |
| ! | TCAATTTGAGACTTGATATG+TGG | + | chr4.4:23793094-23793113 | MS.gene33782:intron | 30.0% |
| !! | AGATATTGCGGTTATTTTCA+AGG | + | chr4.4:23792507-23792526 | MS.gene33782:CDS | 30.0% |
| !! | AGCTTAGTTTTCATGTCATT+GGG | + | chr4.4:23790646-23790665 | MS.gene33782:CDS | 30.0% |
| !! | ATGTTCCCTTGTTTCTATTA+AGG | + | chr4.4:23789562-23789581 | MS.gene33782:intron | 30.0% |
| !! | GAAGAGTTTTAGCAAAAATC+AGG | - | chr4.4:23789140-23789159 | None:intergenic | 30.0% |
| !!! | ATTTTTTTTCTCCTTCTTGC+AGG | + | chr4.4:23789415-23789434 | MS.gene33782:intron | 30.0% |
| !!! | CTTGTTTTATTTGTTGCATG+TGG | + | chr4.4:23789090-23789109 | MS.gene33782:intron | 30.0% |
| AAACCTATATAGACAATGGG+TGG | + | chr4.4:23789649-23789668 | MS.gene33782:intron | 35.0% | |
| AAGCAATGTTGATCAATGAG+GGG | + | chr4.4:23791489-23791508 | MS.gene33782:intron | 35.0% | |
| ACATATTTCTTTGCAAGAGG+CGG | - | chr4.4:23788736-23788755 | None:intergenic | 35.0% | |
| ACTAAACTGGGGTAAAACAA+GGG | - | chr4.4:23789395-23789414 | None:intergenic | 35.0% | |
| ACTTGAATGTTTGCTTTAGC+TGG | + | chr4.4:23789785-23789804 | MS.gene33782:intron | 35.0% | |
| AGCCTCACAGTAATATTAGA+AGG | - | chr4.4:23789865-23789884 | None:intergenic | 35.0% | |
| AGGAAGTTCCAAAACCAAAA+GGG | - | chr4.4:23792612-23792631 | None:intergenic | 35.0% | |
| AGTCAGAGGTTCTGTTTATT+TGG | + | chr4.4:23790207-23790226 | MS.gene33782:intron | 35.0% | |
| AGTTCCTTCAACACATTACA+AGG | - | chr4.4:23789056-23789075 | None:intergenic | 35.0% | |
| AGTTTCTGTTGGACATTATC+AGG | + | chr4.4:23792143-23792162 | MS.gene33782:intron | 35.0% | |
| ATAGAAACAAGGGAACATGA+TGG | - | chr4.4:23789560-23789579 | None:intergenic | 35.0% | |
| ATATGTAGAAGACAGTGAAC+AGG | - | chr4.4:23791887-23791906 | None:intergenic | 35.0% | |
| CAAAAAGTCATTGGAGGTTT+AGG | - | chr4.4:23790083-23790102 | None:intergenic | 35.0% | |
| CAAAGAAGAGCTTATGTTGA+AGG | - | chr4.4:23790160-23790179 | None:intergenic | 35.0% | |
| CAATGTTGCCATTGATAGAT+TGG | + | chr4.4:23788837-23788856 | MS.gene33782:CDS | 35.0% | |
| CAGGATTTGATGTCACAATT+TGG | + | chr4.4:23789264-23789283 | MS.gene33782:intron | 35.0% | |
| CTTCCAGTTTCAATTTCCAT+AGG | - | chr4.4:23792632-23792651 | None:intergenic | 35.0% | |
| CTTCCTATGGAAATTGAAAC+TGG | + | chr4.4:23792626-23792645 | MS.gene33782:intron | 35.0% | |
| GAACATGAGAAAAGACTAGA+GGG | - | chr4.4:23792584-23792603 | None:intergenic | 35.0% | |
| GAAGCAATGTTGATCAATGA+GGG | + | chr4.4:23791488-23791507 | MS.gene33782:intron | 35.0% | |
| GATCATTGCCAAGAATTTCA+TGG | + | chr4.4:23788291-23788310 | MS.gene33782:CDS | 35.0% | |
| GCTCCAAAATTAACTGAAAG+TGG | + | chr4.4:23790344-23790363 | MS.gene33782:CDS | 35.0% | |
| GGAATCAAAAAAGCCATAAC+AGG | - | chr4.4:23793729-23793748 | None:intergenic | 35.0% | |
| GGTTTACCACAAAAAGTCAT+TGG | - | chr4.4:23790092-23790111 | None:intergenic | 35.0% | |
| GTAGAGTTTATCGAGTTTGA+TGG | - | chr4.4:23788338-23788357 | None:intergenic | 35.0% | |
| GTGTTGTATGAGTATCATAC+AGG | - | chr4.4:23791368-23791387 | None:intergenic | 35.0% | |
| TAACCACCCATTGTCTATAT+AGG | - | chr4.4:23789655-23789674 | None:intergenic | 35.0% | |
| TAAGTTGCAACAAGAAACAC+TGG | - | chr4.4:23790113-23790132 | None:intergenic | 35.0% | |
| TACTAAACTGGGGTAAAACA+AGG | - | chr4.4:23789396-23789415 | None:intergenic | 35.0% | |
| TAGAAACAAGGGAACATGAT+GGG | - | chr4.4:23789559-23789578 | None:intergenic | 35.0% | |
| TAGGAAGTTCCAAAACCAAA+AGG | - | chr4.4:23792613-23792632 | None:intergenic | 35.0% | |
| TATGAGTATCATACAGGTGT+CGG | - | chr4.4:23791362-23791381 | None:intergenic | 35.0% | |
| TATGTAGAAGACAGTGAACA+GGG | - | chr4.4:23791886-23791905 | None:intergenic | 35.0% | |
| TCGTAATACGTGATATGGAA+GGG | - | chr4.4:23789623-23789642 | None:intergenic | 35.0% | |
| TCTACAAGTTGTAGTATGGA+AGG | - | chr4.4:23792183-23792202 | None:intergenic | 35.0% | |
| TCTACGAGATTAAAGATGTG+TGG | + | chr4.4:23791466-23791485 | MS.gene33782:intron | 35.0% | |
| TCTCAAGATCCTCTAATGTT+GGG | - | chr4.4:23789888-23789907 | None:intergenic | 35.0% | |
| TCTGCATGTGATTTCGTTTA+GGG | + | chr4.4:23791188-23791207 | MS.gene33782:intron | 35.0% | |
| TGAACGATTGACATGTTATG+AGG | - | chr4.4:23792293-23792312 | None:intergenic | 35.0% | |
| TGACTTGATATCATTCATGC+TGG | + | chr4.4:23790623-23790642 | MS.gene33782:CDS | 35.0% | |
| TGAGTAGTTGGATATATGCA+GGG | + | chr4.4:23792819-23792838 | MS.gene33782:intron | 35.0% | |
| TGCAGATAGTCAGTTTCTTT+CGG | + | chr4.4:23793448-23793467 | MS.gene33782:intron | 35.0% | |
| TGCCTTCTAATATTACTGTG+AGG | + | chr4.4:23789860-23789879 | MS.gene33782:CDS | 35.0% | |
| TTACCACAAAAAGTCATTGG+AGG | - | chr4.4:23790089-23790108 | None:intergenic | 35.0% | |
| TTCAAAGAAGATGCATTTGG+TGG | + | chr4.4:23793828-23793847 | MS.gene33782:CDS | 35.0% | |
| TTCTGCATGTGATTTCGTTT+AGG | + | chr4.4:23791187-23791206 | MS.gene33782:intron | 35.0% | |
| ! | AAACCTCCAATGACTTTTTG+TGG | + | chr4.4:23790083-23790102 | MS.gene33782:intron | 35.0% |
| ! | AGACAATTTAGCCTCTGAAA+TGG | + | chr4.4:23788965-23788984 | MS.gene33782:intron | 35.0% |
| ! | CTGTTTTGCTTGCATATGTA+TGG | + | chr4.4:23792119-23792138 | MS.gene33782:intron | 35.0% |
| ! | CTTTGATGAAAGTTTTCCAG+CGG | + | chr4.4:23790175-23790194 | MS.gene33782:CDS | 35.0% |
| ! | GATTCCTTATGTCATTTGTG+TGG | + | chr4.4:23793743-23793762 | MS.gene33782:intron | 35.0% |
| ! | TATTATGGTGGTGACAGATT+AGG | + | chr4.4:23793593-23793612 | MS.gene33782:intron | 35.0% |
| ! | TCAAATGCTAGCCTATACTA+TGG | + | chr4.4:23789009-23789028 | MS.gene33782:intron | 35.0% |
| ! | TGAAAGTGGTTTCCAGTTTT+TGG | + | chr4.4:23790358-23790377 | MS.gene33782:CDS | 35.0% |
| ! | TGGTTTAGATGATCTTTTGG+GGG | + | chr4.4:23792036-23792055 | MS.gene33782:intron | 35.0% |
| ! | TTTTCACAACTTTATAGGGC+AGG | + | chr4.4:23791022-23791041 | MS.gene33782:intron | 35.0% |
| !! | CTCCTTTCTTGATGATGATT+CGG | - | chr4.4:23791103-23791122 | None:intergenic | 35.0% |
| !! | GAGCTTAGTTTTCATGTCAT+TGG | + | chr4.4:23790645-23790664 | MS.gene33782:CDS | 35.0% |
| !! | GCTTAGTTTTCATGTCATTG+GGG | + | chr4.4:23790647-23790666 | MS.gene33782:CDS | 35.0% |
| !!! | TTTGGTTTTGGAACTTCCTA+TGG | + | chr4.4:23792613-23792632 | MS.gene33782:intron | 35.0% |
| !!! | TTTTCAGGGATTTGTTGTTG+TGG | + | chr4.4:23792436-23792455 | MS.gene33782:intron | 35.0% |
| AACTCCTTAGCTATGAAGCA+CGG | + | chr4.4:23791212-23791231 | MS.gene33782:intron | 40.0% | |
| AAGTATATCGTGGTTCTCGA+AGG | - | chr4.4:23793207-23793226 | None:intergenic | 40.0% | |
| ACACATTGACCGAATTTCAG+AGG | + | chr4.4:23790837-23790856 | MS.gene33782:CDS | 40.0% | |
| ACCAGTTTGAACCATTTCAG+AGG | - | chr4.4:23788979-23788998 | None:intergenic | 40.0% | |
| AGAATCAAAGTTGCTTACCC+TGG | - | chr4.4:23793683-23793702 | None:intergenic | 40.0% | |
| AGCAATGTTGATCAATGAGG+GGG | + | chr4.4:23791490-23791509 | MS.gene33782:intron | 40.0% | |
| AGTTCCAAAACCAAAAGGGA+AGG | - | chr4.4:23792608-23792627 | None:intergenic | 40.0% | |
| ATAAACAGAACCTCTGACTC+AGG | - | chr4.4:23790206-23790225 | None:intergenic | 40.0% | |
| ATAGCTCCTTAGACATGCTA+AGG | + | chr4.4:23791809-23791828 | MS.gene33782:intron | 40.0% | |
| CAAGAATTTCATGGACATGG+TGG | + | chr4.4:23788300-23788319 | MS.gene33782:CDS | 40.0% | |
| CACCATGTCCATGAAATTCT+TGG | - | chr4.4:23788302-23788321 | None:intergenic | 40.0% | |
| CACGTCCTTGTGGTTAAATA+TGG | + | chr4.4:23789811-23789830 | MS.gene33782:intron | 40.0% | |
| CACTGCCATATTTAACCACA+AGG | - | chr4.4:23789819-23789838 | None:intergenic | 40.0% | |
| CATTCCGCCAATAATTTAGC+CGG | - | chr4.4:23788790-23788809 | None:intergenic | 40.0% | |
| CGAAATCACATGCAGAAACA+AGG | - | chr4.4:23791184-23791203 | None:intergenic | 40.0% | |
| CGAATCATCATCAAGAAAGG+AGG | + | chr4.4:23791101-23791120 | MS.gene33782:CDS | 40.0% | |
| CTAGCCTATACTATGGAGTT+TGG | + | chr4.4:23789016-23789035 | MS.gene33782:intron | 40.0% | |
| CTCGTAATACGTGATATGGA+AGG | - | chr4.4:23789624-23789643 | None:intergenic | 40.0% | |
| CTTGTGGTTAAATATGGCAG+TGG | + | chr4.4:23789817-23789836 | MS.gene33782:intron | 40.0% | |
| GACCGAATCATCATCAAGAA+AGG | + | chr4.4:23791098-23791117 | MS.gene33782:CDS | 40.0% | |
| GATACTCATACAACACGTGT+TGG | + | chr4.4:23791372-23791391 | MS.gene33782:intron | 40.0% | |
| GATATGTCTTATATGTGCCG+AGG | - | chr4.4:23791448-23791467 | None:intergenic | 40.0% | |
| GGAACATGAGAAAAGACTAG+AGG | - | chr4.4:23792585-23792604 | None:intergenic | 40.0% | |
| GGAAGCAATGTTGATCAATG+AGG | + | chr4.4:23791487-23791506 | MS.gene33782:intron | 40.0% | |
| GGCTAAATTATTGGCGGAAT+GGG | + | chr4.4:23788789-23788808 | MS.gene33782:CDS | 40.0% | |
| GTCTCAAGATCCTCTAATGT+TGG | - | chr4.4:23789889-23789908 | None:intergenic | 40.0% | |
| GTCTTAAGTATCCCCTGTTA+TGG | + | chr4.4:23793713-23793732 | MS.gene33782:intron | 40.0% | |
| GTGAGTAGTTGGATATATGC+AGG | + | chr4.4:23792818-23792837 | MS.gene33782:intron | 40.0% | |
| GTGTCCAAACTCCATAGTAT+AGG | - | chr4.4:23789023-23789042 | None:intergenic | 40.0% | |
| GTTCCAAAACCAAAAGGGAA+GGG | - | chr4.4:23792607-23792626 | None:intergenic | 40.0% | |
| TAGCTCCTTAGACATGCTAA+GGG | + | chr4.4:23791810-23791829 | MS.gene33782:intron | 40.0% | |
| TATAGGGCAGGAAAGAAAGT+TGG | + | chr4.4:23791034-23791053 | MS.gene33782:intron | 40.0% | |
| TGAACAAAGACACACAGATG+TGG | - | chr4.4:23789325-23789344 | None:intergenic | 40.0% | |
| TGCACCTTGTAATGTGTTGA+AGG | + | chr4.4:23789049-23789068 | MS.gene33782:intron | 40.0% | |
| TGCCAAGAATTTCATGGACA+TGG | + | chr4.4:23788297-23788316 | MS.gene33782:CDS | 40.0% | |
| TGGATACAAATGCACAGCTT+TGG | + | chr4.4:23790467-23790486 | MS.gene33782:CDS | 40.0% | |
| TGTTGGACATTATCAGGTTC+TGG | + | chr4.4:23792149-23792168 | MS.gene33782:intron | 40.0% | |
| TTAGCATGTCTAAGGAGCTA+TGG | - | chr4.4:23791810-23791829 | None:intergenic | 40.0% | |
| TTCCAAAACCAAAAGGGAAG+GGG | - | chr4.4:23792606-23792625 | None:intergenic | 40.0% | |
| TTGAAGCTCTTGACAATGAC+AGG | + | chr4.4:23788878-23788897 | MS.gene33782:CDS | 40.0% | |
| ! | AAGGTCTTGTCAACATGACT+TGG | - | chr4.4:23790141-23790160 | None:intergenic | 40.0% |
| ! | ACAGCTTTGGTACATCATCA+GGG | + | chr4.4:23790480-23790499 | MS.gene33782:CDS | 40.0% |
| ! | ACCTGATCTGTGACATTTTC+AGG | - | chr4.4:23793516-23793535 | None:intergenic | 40.0% |
| ! | AGGTCTTGTCAACATGACTT+GGG | - | chr4.4:23790140-23790159 | None:intergenic | 40.0% |
| ! | AGTTTATCGAGTTTGATGGC+AGG | - | chr4.4:23788334-23788353 | None:intergenic | 40.0% |
| ! | GGTTTAGATGATCTTTTGGG+GGG | + | chr4.4:23792037-23792056 | MS.gene33782:intron | 40.0% |
| ! | TAGTTTTCATGTCATTGGGG+AGG | + | chr4.4:23790650-23790669 | MS.gene33782:CDS | 40.0% |
| ! | TGCTCTTCATCGTCTACTTT+TGG | + | chr4.4:23790575-23790594 | MS.gene33782:intron | 40.0% |
| ! | TTGTGCTTTGATAGTCCATC+TGG | - | chr4.4:23788820-23788839 | None:intergenic | 40.0% |
| !! | AGACTTATGCTCTGGAACAA+TGG | + | chr4.4:23789905-23789924 | MS.gene33782:CDS | 40.0% |
| !! | CATGTTTTGAACATGCTTCG+TGG | + | chr4.4:23788673-23788692 | MS.gene33782:intron | 40.0% |
| !! | GACTTATGCTCTGGAACAAT+GGG | + | chr4.4:23789906-23789925 | MS.gene33782:CDS | 40.0% |
| !! | TTAGAAGGCATTGATTCCCT+CGG | - | chr4.4:23789850-23789869 | None:intergenic | 40.0% |
| ACAACACGTGTTGGACAACT+CGG | + | chr4.4:23791381-23791400 | MS.gene33782:intron | 45.0% | |
| ACAAGGGTCGAGAGTGAAAA+TGG | - | chr4.4:23789379-23789398 | None:intergenic | 45.0% | |
| AGGGGAACTCTCTATACTGT+TGG | + | chr4.4:23792060-23792079 | MS.gene33782:intron | 45.0% | |
| AGTGTCAGACAAACTCAGAC+TGG | + | chr4.4:23791282-23791301 | MS.gene33782:intron | 45.0% | |
| ATTAAGGACCTTGCAGACCT+TGG | + | chr4.4:23790866-23790885 | MS.gene33782:CDS | 45.0% | |
| ATTATGACGAGTTCCCATCC+AGG | + | chr4.4:23793662-23793681 | MS.gene33782:CDS | 45.0% | |
| ATTGTGGTACTCGCTGTAGA+TGG | + | chr4.4:23792971-23792990 | MS.gene33782:intron | 45.0% | |
| CAAAGTTGCTTACCCTGGAT+GGG | - | chr4.4:23793678-23793697 | None:intergenic | 45.0% | |
| CATGACACGCCTAATCCTTT+AGG | - | chr4.4:23791241-23791260 | None:intergenic | 45.0% | |
| CATGTCAATCGTTCATTGGC+TGG | + | chr4.4:23792298-23792317 | MS.gene33782:intron | 45.0% | |
| CCTGCCACACAAATGACATA+AGG | - | chr4.4:23793750-23793769 | None:intergenic | 45.0% | |
| CGGCTAAATTATTGGCGGAA+TGG | + | chr4.4:23788788-23788807 | MS.gene33782:CDS | 45.0% | |
| CTAAAGGATTAGGCGTGTCA+TGG | + | chr4.4:23791239-23791258 | MS.gene33782:intron | 45.0% | |
| CTGGTCAAACTTCAACAGGT+TGG | + | chr4.4:23790890-23790909 | MS.gene33782:intron | 45.0% | |
| GAGCTTCTCTGTCTCTGTAT+CGG | - | chr4.4:23790328-23790347 | None:intergenic | 45.0% | |
| GCAATGTTGATCAATGAGGG+GGG | + | chr4.4:23791491-23791510 | MS.gene33782:intron | 45.0% | |
| GCCTGAAAATGTCACAGATC+AGG | + | chr4.4:23793512-23793531 | MS.gene33782:CDS | 45.0% | |
| GGATCTTGAGACTTATGCTC+TGG | + | chr4.4:23789897-23789916 | MS.gene33782:CDS | 45.0% | |
| GTGTGGCAGGATGTATTTGA+AGG | + | chr4.4:23793760-23793779 | MS.gene33782:intron | 45.0% | |
| TATGAAGCACGGACACCTAA+AGG | + | chr4.4:23791223-23791242 | MS.gene33782:intron | 45.0% | |
| TCAAAGTTGCTTACCCTGGA+TGG | - | chr4.4:23793679-23793698 | None:intergenic | 45.0% | |
| TCATCTGCGAAGCTATTCTC+AGG | + | chr4.4:23788368-23788387 | MS.gene33782:CDS | 45.0% | |
| TCTCCTTCTTGCAGGAAGAT+CGG | + | chr4.4:23789423-23789442 | MS.gene33782:intron | 45.0% | |
| TGTGCAACAGATTCTCAGCA+AGG | - | chr4.4:23790691-23790710 | None:intergenic | 45.0% | |
| TTAAGGACCTTGCAGACCTT+GGG | + | chr4.4:23790867-23790886 | MS.gene33782:CDS | 45.0% | |
| TTATGACGAGTTCCCATCCA+GGG | + | chr4.4:23793663-23793682 | MS.gene33782:CDS | 45.0% | |
| TTCTTTGCTTCGACACACCT+CGG | + | chr4.4:23791428-23791447 | MS.gene33782:intron | 45.0% | |
| TTCTTTGCTTCGACACTCCT+TGG | + | chr4.4:23791328-23791347 | MS.gene33782:intron | 45.0% | |
| TTGGCAATGATCCTAACCTC+AGG | - | chr4.4:23788283-23788302 | None:intergenic | 45.0% | |
| TTTCCGATCTTCCTGCAAGA+AGG | - | chr4.4:23789429-23789448 | None:intergenic | 45.0% | |
| ! | CACAGCTTTGGTACATCATC+AGG | + | chr4.4:23790479-23790498 | MS.gene33782:CDS | 45.0% |
| ! | CCTTATGTCATTTGTGTGGC+AGG | + | chr4.4:23793747-23793766 | MS.gene33782:intron | 45.0% |
| ! | GTGGTGACAGATTAGGTTGT+GGG | + | chr4.4:23793600-23793619 | MS.gene33782:intron | 45.0% |
| !! | ACCTGTGCCGGCTAAATTAT+TGG | + | chr4.4:23788780-23788799 | MS.gene33782:CDS | 45.0% |
| !! | GCCTCTGAAATGGTTCAAAC+TGG | + | chr4.4:23788975-23788994 | MS.gene33782:intron | 45.0% |
| !! | TAGATGATCTTTTGGGGGGA+GGG | + | chr4.4:23792041-23792060 | MS.gene33782:intron | 45.0% |
| !! | TCATCGTCTACTTTTGGTGC+AGG | + | chr4.4:23790581-23790600 | MS.gene33782:intron | 45.0% |
| !! | TGTGCCGGCTAAATTATTGG+CGG | + | chr4.4:23788783-23788802 | MS.gene33782:CDS | 45.0% |
| !! | TTAGATGATCTTTTGGGGGG+AGG | + | chr4.4:23792040-23792059 | MS.gene33782:intron | 45.0% |
| !! | TTATGCTCTGGAACAATGGG+AGG | + | chr4.4:23789909-23789928 | MS.gene33782:CDS | 45.0% |
| !!! | TTCCCCTTCCCTTTTGGTTT+TGG | + | chr4.4:23792601-23792620 | MS.gene33782:intron | 45.0% |
| !! | AGTATATATTTAATTATATA+TGG | + | chr4.4:23792016-23792035 | MS.gene33782:intron | 5.0% |
| !!! | TAATTTTTATTTTTTTGAAT+GGG | + | chr4.4:23793375-23793394 | MS.gene33782:intron | 5.0% |
| !!! | TTAATTTTTATTTTTTTGAA+TGG | + | chr4.4:23793374-23793393 | MS.gene33782:intron | 5.0% |
| CAATGGCATTACAGCAGACC+AGG | + | chr4.4:23792909-23792928 | MS.gene33782:CDS | 50.0% | |
| CGACGTCTTAGTGTCGTGTT+AGG | + | chr4.4:23791774-23791793 | MS.gene33782:intron | 50.0% | |
| CTCCACCCTTAGCATGTCTA+AGG | - | chr4.4:23791818-23791837 | None:intergenic | 50.0% | |
| CTCCTTAGACATGCTAAGGG+TGG | + | chr4.4:23791813-23791832 | MS.gene33782:intron | 50.0% | |
| CTTAGACATGCTAAGGGTGG+AGG | + | chr4.4:23791816-23791835 | MS.gene33782:intron | 50.0% | |
| GACACTTGTCGTACGAGTGT+CGG | - | chr4.4:23791268-23791287 | None:intergenic | 50.0% | |
| GCACGGACACCTAAAGGATT+AGG | + | chr4.4:23791229-23791248 | MS.gene33782:intron | 50.0% | |
| GCCAATAATTTAGCCGGCAC+AGG | - | chr4.4:23788784-23788803 | None:intergenic | 50.0% | |
| GTGTCCGTGCTTCATAGCTA+AGG | - | chr4.4:23791219-23791238 | None:intergenic | 50.0% | |
| GTTGAAGTTTGACCAGCCCA+AGG | - | chr4.4:23790886-23790905 | None:intergenic | 50.0% | |
| TAGCTGGTAACACGTCCTTG+TGG | + | chr4.4:23789801-23789820 | MS.gene33782:intron | 50.0% | |
| TCATCCTCGTGTTGCACAGA+GGG | + | chr4.4:23793479-23793498 | MS.gene33782:CDS | 50.0% | |
| TGCTTCGACACTCCTTGGAT+CGG | + | chr4.4:23791333-23791352 | MS.gene33782:intron | 50.0% | |
| TGTGAGGCTCCCAACATTAG+AGG | + | chr4.4:23789876-23789895 | MS.gene33782:CDS | 50.0% | |
| ! | CTCATGTTCCCCTTCCCTTT+TGG | + | chr4.4:23792595-23792614 | MS.gene33782:intron | 50.0% |
| ! | GCATATTGATGGACCTGTGC+CGG | + | chr4.4:23788768-23788787 | MS.gene33782:CDS | 50.0% |
| ! | GCATTTGGTGGTCAAGTCTG+AGG | + | chr4.4:23793840-23793859 | MS.gene33782:CDS | 50.0% |
| ! | GGTGGTGACAGATTAGGTTG+TGG | + | chr4.4:23793599-23793618 | MS.gene33782:intron | 50.0% |
| !! | AGATGATCTTTTGGGGGGAG+GGG | + | chr4.4:23792042-23792061 | MS.gene33782:intron | 50.0% |
| !! | CGTTCATTGGCTGGCTTTAG+TGG | + | chr4.4:23792307-23792326 | MS.gene33782:intron | 50.0% |
| !! | CTACTTTTGGTGCAGGAGAG+AGG | + | chr4.4:23790588-23790607 | MS.gene33782:intron | 50.0% |
| !! | GTGACATTTTCAGGCACTGC+TGG | - | chr4.4:23793507-23793526 | None:intergenic | 50.0% |
| !! | TGGGCTGGTCAAACTTCAAC+AGG | + | chr4.4:23790886-23790905 | MS.gene33782:CDS | 50.0% |
| ATGGCAGTGGAACTTTGCCG+AGG | + | chr4.4:23789830-23789849 | MS.gene33782:intron | 55.0% | |
| CTCATCCTCGTGTTGCACAG+AGG | + | chr4.4:23793478-23793497 | MS.gene33782:CDS | 55.0% | |
| GACTGCGCCAGAGAATGGAA+TGG | + | chr4.4:23793790-23793809 | MS.gene33782:CDS | 55.0% | |
| TGGCAGTGGAACTTTGCCGA+GGG | + | chr4.4:23789831-23789850 | MS.gene33782:intron | 55.0% | |
| !! | CAGGAGAGAGGTGTTGATGC+AGG | + | chr4.4:23790600-23790619 | MS.gene33782:intron | 55.0% |
| CGTGTGACTGCGCCAGAGAA+TGG | + | chr4.4:23793785-23793804 | MS.gene33782:CDS | 60.0% | |
| GCGGAATGGGTGCTTCCAGA+TGG | + | chr4.4:23788802-23788821 | MS.gene33782:CDS | 60.0% | |
| GGTACCCTCTGTGCAACACG+AGG | - | chr4.4:23793486-23793505 | None:intergenic | 60.0% | |
| TGACCAGCCCAAGGTCTGCA+AGG | - | chr4.4:23790877-23790896 | None:intergenic | 60.0% | |
| !! | AGGTGTCGGACACCGATCCA+AGG | - | chr4.4:23791348-23791367 | None:intergenic | 60.0% |
| AGCGGCGTCTCCTGAGTCAG+AGG | + | chr4.4:23790193-23790212 | MS.gene33782:CDS | 65.0% | |
| GGACCTTGCAGACCTTGGGC+TGG | + | chr4.4:23790871-23790890 | MS.gene33782:CDS | 65.0% | |
| TCTGACTCAGGAGACGCCGC+TGG | - | chr4.4:23790194-23790213 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 23788277 | 23793903 | 23788277 | ID=MS.gene33782 |
| chr4.4 | mRNA | 23788277 | 23793903 | 23788277 | ID=MS.gene33782.t1;Parent=MS.gene33782 |
| chr4.4 | exon | 23788277 | 23788389 | 23788277 | ID=MS.gene33782.t1.exon1;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23788277 | 23788389 | 23788277 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23788726 | 23788899 | 23788726 | ID=MS.gene33782.t1.exon2;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23788726 | 23788899 | 23788726 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23789437 | 23789505 | 23789437 | ID=MS.gene33782.t1.exon3;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23789437 | 23789505 | 23789437 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23789837 | 23789930 | 23789837 | ID=MS.gene33782.t1.exon4;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23789837 | 23789930 | 23789837 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23790114 | 23790214 | 23790114 | ID=MS.gene33782.t1.exon5;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23790114 | 23790214 | 23790114 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23790334 | 23790379 | 23790334 | ID=MS.gene33782.t1.exon6;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23790334 | 23790379 | 23790334 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23790463 | 23790522 | 23790463 | ID=MS.gene33782.t1.exon7;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23790463 | 23790522 | 23790463 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23790603 | 23790671 | 23790603 | ID=MS.gene33782.t1.exon8;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23790603 | 23790671 | 23790603 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23790824 | 23790907 | 23790824 | ID=MS.gene33782.t1.exon9;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23790824 | 23790907 | 23790824 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23791039 | 23791122 | 23791039 | ID=MS.gene33782.t1.exon10;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23791039 | 23791122 | 23791039 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23792443 | 23792528 | 23792443 | ID=MS.gene33782.t1.exon11;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23792443 | 23792528 | 23792443 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23792840 | 23792930 | 23792840 | ID=MS.gene33782.t1.exon12;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23792840 | 23792930 | 23792840 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23793453 | 23793533 | 23793453 | ID=MS.gene33782.t1.exon13;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23793453 | 23793533 | 23793453 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23793610 | 23793684 | 23793610 | ID=MS.gene33782.t1.exon14;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23793610 | 23793684 | 23793610 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| chr4.4 | exon | 23793769 | 23793903 | 23793769 | ID=MS.gene33782.t1.exon15;Parent=MS.gene33782.t1 |
| chr4.4 | CDS | 23793769 | 23793903 | 23793769 | ID=cds.MS.gene33782.t1;Parent=MS.gene33782.t1 |
| Gene Sequence |
| Protein sequence |
