AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35331

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35331.t1 MTR_2g084530 93.860 456 25 1 1 453 1 456 0.0 840
MS.gene35331.t1 MTR_4g056520 68.192 459 139 2 1 453 1 458 0.0 617
MS.gene35331.t1 MTR_4g057600 25.799 407 267 10 44 444 108 485 1.13e-33 132
MS.gene35331.t1 MTR_1g050545 28.802 434 251 16 38 453 90 483 3.85e-33 131
MS.gene35331.t1 MTR_2g095730 27.163 416 254 14 44 444 107 488 7.22e-33 130
MS.gene35331.t1 MTR_1g094155 25.618 445 273 14 29 452 86 493 1.28e-31 127
MS.gene35331.t1 MTR_2g095750 27.139 409 260 10 44 444 113 491 5.63e-31 125
MS.gene35331.t1 MTR_4g057570 26.047 430 281 14 27 446 83 485 1.89e-30 123
MS.gene35331.t1 MTR_4g057585 25.629 437 280 13 21 445 84 487 2.52e-30 123
MS.gene35331.t1 MTR_4g057595 26.503 449 280 14 11 445 76 488 2.60e-30 123
MS.gene35331.t1 MTR_4g084710 25.416 421 266 11 36 444 46 430 6.17e-30 121
MS.gene35331.t1 MTR_5g097180 26.340 429 252 14 36 444 44 428 6.14e-29 118
MS.gene35331.t1 MTR_4g075150 25.173 433 270 14 36 444 51 453 2.34e-24 105
MS.gene35331.t1 MTR_2g012850 25.231 432 266 14 36 441 52 452 4.18e-24 104
MS.gene35331.t1 MTR_1g020090 25.503 447 275 16 17 446 84 489 6.81e-24 104
MS.gene35331.t1 MTR_7g013790 25.629 437 261 16 36 443 52 453 7.76e-24 103
MS.gene35331.t1 MTR_3g079560 24.883 426 267 13 36 446 95 482 1.26e-23 103
MS.gene35331.t1 MTR_2g012860 25.508 443 253 14 36 441 58 460 1.39e-23 103
MS.gene35331.t1 MTR_1g021020 24.419 430 261 15 36 446 95 479 3.46e-23 102
MS.gene35331.t1 MTR_3g079590 24.362 431 263 16 36 446 95 482 4.63e-23 102
MS.gene35331.t1 MTR_8g099930 26.603 421 265 16 36 437 50 445 6.97e-23 101
MS.gene35331.t1 MTR_4g089155 25.114 438 261 14 36 441 70 472 7.49e-23 101
MS.gene35331.t1 MTR_4g075150 25.173 433 268 15 36 444 51 451 1.06e-22 100
MS.gene35331.t1 MTR_1g021010 25.000 428 262 13 36 446 93 478 1.28e-22 100
MS.gene35331.t1 MTR_4g122950 25.571 438 275 18 36 446 56 469 1.58e-22 100
MS.gene35331.t1 MTR_3g498755 26.526 426 260 17 36 437 32 428 1.11e-21 97.4
MS.gene35331.t1 MTR_2g095710 25.182 413 249 13 49 444 105 474 2.68e-21 96.7
MS.gene35331.t1 MTR_2g449850 26.700 397 252 15 57 437 72 445 3.55e-21 96.3
MS.gene35331.t1 MTR_1g040370 24.582 419 250 11 36 446 47 407 8.25e-21 94.7
MS.gene35331.t1 MTR_4g122960 24.434 442 273 18 36 446 56 467 8.90e-21 95.1
MS.gene35331.t1 MTR_3g034290 24.821 419 276 12 36 444 91 480 9.38e-21 95.1
MS.gene35331.t1 MTR_3g434850 25.926 459 295 19 6 446 15 446 2.37e-20 93.6
MS.gene35331.t1 MTR_3g079620 32.370 173 104 5 36 199 95 263 3.72e-20 93.2
MS.gene35331.t1 MTR_0003s0560 25.123 406 233 15 65 444 117 477 3.91e-20 93.2
MS.gene35331.t1 MTR_7g021130 26.603 421 263 17 36 437 47 440 6.38e-20 92.4
MS.gene35331.t1 MTR_3g079600 32.370 173 104 5 36 199 93 261 7.80e-19 89.4
MS.gene35331.t1 MTR_0003s0560 28.736 174 114 4 36 202 90 260 1.01e-18 87.4
MS.gene35331.t1 MTR_2g062980 32.934 167 97 6 36 194 57 216 1.62e-18 88.2
MS.gene35331.t1 MTR_1g095540 24.009 429 271 19 31 437 44 439 2.76e-18 87.4
MS.gene35331.t1 MTR_3g079570 30.636 173 107 5 36 199 96 264 3.30e-18 87.4
MS.gene35331.t1 MTR_2g062990 35.172 145 83 5 36 172 57 198 4.77e-18 86.7
MS.gene35331.t1 MTR_3g079630 31.609 174 104 6 36 199 95 263 9.36e-18 85.9
MS.gene35331.t1 MTR_2g081620 24.590 427 271 19 36 443 58 452 1.54e-17 85.1
MS.gene35331.t1 MTR_2g063000 33.333 147 85 5 36 172 56 199 2.12e-17 84.7
MS.gene35331.t1 MTR_7g080180 22.070 512 304 21 1 442 1 487 3.18e-17 84.3
MS.gene35331.t1 MTR_3g090150 23.502 434 281 17 38 449 54 458 5.48e-17 83.6
MS.gene35331.t1 MTR_8g011350 22.581 434 278 15 55 442 63 484 1.11e-16 82.8
MS.gene35331.t1 MTR_1g095560 31.579 152 93 5 31 173 44 193 1.60e-16 82.0
MS.gene35331.t1 MTR_1g095560 31.579 152 93 5 31 173 44 193 1.64e-16 82.0
MS.gene35331.t1 MTR_5g072570 31.176 170 103 5 36 196 46 210 2.03e-16 81.6
MS.gene35331.t1 MTR_3g090130 23.399 406 264 13 65 449 72 451 2.54e-16 81.3
MS.gene35331.t1 MTR_3g034290 28.736 174 115 4 36 202 91 262 5.60e-16 80.1
MS.gene35331.t1 MTR_8g011350 28.342 187 118 5 55 227 63 247 9.13e-15 76.6
MS.gene35331.t1 MTR_7g080180 26.190 252 153 11 1 225 1 246 1.34e-14 75.9
MS.gene35331.t1 MTR_7g051430 33.824 136 76 4 59 183 69 201 5.87e-14 73.9
MS.gene35331.t1 MTR_7g051430 33.824 136 76 4 59 183 69 201 7.62e-14 73.9
MS.gene35331.t1 MTR_3g114620 39.823 113 31 2 115 227 12 87 4.47e-13 65.1
MS.gene35331.t1 MTR_2g018600 23.673 452 262 20 34 443 49 459 2.16e-12 69.3
MS.gene35331.t1 MTR_2g018590 23.025 443 277 18 34 443 48 459 3.36e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35331.t1 AT2G27920 62.037 432 155 4 28 451 29 459 0.0 545
MS.gene35331.t1 AT2G27920 59.221 385 148 4 75 451 4 387 5.45e-158 452
MS.gene35331.t1 AT2G27920 57.514 346 138 4 114 451 48 392 6.57e-134 391
MS.gene35331.t1 AT3G45010 26.037 434 283 10 20 444 88 492 2.60e-37 143
MS.gene35331.t1 AT5G22980 24.879 414 261 11 44 444 111 487 4.15e-32 128
MS.gene35331.t1 AT3G10410 27.404 416 248 14 44 444 112 488 1.58e-31 127
MS.gene35331.t1 AT1G15000 25.647 425 255 14 36 444 38 417 2.37e-30 122
MS.gene35331.t1 AT1G11080 26.906 446 260 17 36 446 67 481 8.87e-25 107
MS.gene35331.t1 AT1G11080 26.906 446 260 17 36 446 67 481 9.22e-25 107
MS.gene35331.t1 AT4G15100 25.901 444 271 14 36 449 61 476 6.22e-23 101
MS.gene35331.t1 AT1G61130 26.682 446 251 17 36 446 48 452 1.42e-22 100
MS.gene35331.t1 AT5G23210 25.290 431 287 12 36 444 68 485 2.33e-22 100
MS.gene35331.t1 AT3G52010 26.573 429 257 16 36 443 82 473 5.25e-22 99.0
MS.gene35331.t1 AT2G35770 25.178 421 270 15 36 441 55 445 7.20e-22 98.2
MS.gene35331.t1 AT4G30610 25.517 435 261 18 36 441 49 449 1.29e-20 94.4
MS.gene35331.t1 AT2G24000 25.172 437 261 19 36 441 47 448 1.46e-20 94.4
MS.gene35331.t1 AT3G52000 25.176 425 264 14 36 443 81 468 6.22e-20 92.4
MS.gene35331.t1 AT2G05850 25.926 432 257 19 36 443 81 473 1.42e-19 91.7
MS.gene35331.t1 AT1G43780 31.016 187 111 5 36 208 54 236 1.53e-19 91.3
MS.gene35331.t1 AT2G35780 24.645 422 264 15 36 437 47 434 2.13e-19 90.9
MS.gene35331.t1 AT2G33530 26.244 442 269 19 31 446 44 454 3.57e-19 90.1
MS.gene35331.t1 AT2G24010 37.415 147 78 5 36 173 47 188 3.98e-19 90.1
MS.gene35331.t1 AT5G23210 29.185 233 147 8 36 256 68 294 1.07e-18 88.6
MS.gene35331.t1 AT3G07990 24.722 449 258 21 36 450 51 453 1.61e-18 88.2
MS.gene35331.t1 AT5G08260 24.385 447 276 18 36 450 56 472 1.65e-18 88.2
MS.gene35331.t1 AT1G28110 25.566 442 270 16 31 446 42 450 1.76e-18 88.2
MS.gene35331.t1 AT1G28110 25.566 442 270 16 31 446 42 450 1.76e-18 88.2
MS.gene35331.t1 AT3G63470 23.585 424 273 16 36 443 98 486 2.34e-18 87.8
MS.gene35331.t1 AT4G30810 24.228 421 277 16 46 451 67 460 2.55e-18 87.8
MS.gene35331.t1 AT5G42240 32.620 187 107 7 36 208 49 230 4.25e-18 87.0
MS.gene35331.t1 AT5G42230 33.974 156 90 4 65 208 72 226 4.45e-18 86.7
MS.gene35331.t1 AT5G42230 33.974 156 90 4 65 208 72 226 4.45e-18 86.7
MS.gene35331.t1 AT3G17180 33.562 146 86 5 36 173 56 198 8.49e-18 85.9
MS.gene35331.t1 AT4G12910 25.054 459 268 19 36 442 52 486 1.04e-17 85.9
MS.gene35331.t1 AT3G17180 23.908 435 278 18 36 443 56 464 1.14e-17 85.5
MS.gene35331.t1 AT2G12480 36.842 114 67 1 65 173 75 188 1.61e-16 82.0
MS.gene35331.t1 AT4G12910 26.953 256 162 9 36 279 52 294 1.64e-16 82.0
MS.gene35331.t1 AT2G12480 36.842 114 67 1 65 173 75 188 1.71e-16 82.0
MS.gene35331.t1 AT2G12480 36.842 114 67 1 65 173 75 188 1.78e-16 81.6
MS.gene35331.t1 AT2G12480 36.842 114 67 1 65 173 75 188 2.00e-16 81.6
MS.gene35331.t1 AT3G02110 31.655 139 89 2 65 197 81 219 7.56e-16 80.1
MS.gene35331.t1 AT3G25420 26.136 264 156 9 36 279 47 291 1.41e-15 79.3
MS.gene35331.t1 AT3G52020 25.517 435 254 20 36 443 96 487 1.83e-15 79.0
MS.gene35331.t1 AT2G24010 33.333 162 79 6 36 173 18 174 3.45e-15 77.0
MS.gene35331.t1 AT2G24010 33.333 162 79 6 36 173 47 203 6.91e-15 77.0
MS.gene35331.t1 AT2G24010 33.333 162 79 6 36 173 18 174 7.20e-15 77.0
MS.gene35331.t1 AT5G22960 30.263 152 84 5 33 182 34 165 3.15e-14 71.6
MS.gene35331.t1 AT5G36180 22.727 418 256 16 34 430 48 419 2.32e-13 72.0
MS.gene35331.t1 AT3G56540 30.935 139 87 4 36 168 96 231 3.27e-13 70.1
MS.gene35331.t1 AT1G73290 26.180 233 136 10 34 248 47 261 1.32e-12 68.9
MS.gene35331.t1 AT1G73280 26.423 246 141 10 6 224 14 246 2.02e-12 68.9
MS.gene35331.t1 AT1G73290 26.180 233 136 10 34 248 47 261 2.57e-12 68.9
MS.gene35331.t1 AT1G73290 26.180 233 136 10 34 248 47 261 2.98e-12 68.6
MS.gene35331.t1 AT1G73300 22.222 423 256 18 34 432 48 421 3.90e-12 68.6
MS.gene35331.t1 AT1G73300 22.222 423 256 18 34 432 48 421 3.90e-12 68.6
MS.gene35331.t1 AT1G73280 26.423 246 141 10 6 224 14 246 4.70e-12 68.2
MS.gene35331.t1 AT3G12220 30.682 176 102 6 34 195 42 211 7.53e-12 67.4
MS.gene35331.t1 AT3G12220 30.682 176 102 6 34 195 42 211 8.48e-12 67.0
MS.gene35331.t1 AT2G22970 26.991 226 131 8 34 242 40 248 1.30e-11 65.9
MS.gene35331.t1 AT2G22980 22.760 413 258 17 34 430 41 408 1.64e-11 66.2
MS.gene35331.t1 AT2G22970 26.991 226 131 8 34 242 40 248 1.67e-11 66.2
MS.gene35331.t1 AT2G22970 26.991 226 131 8 34 242 40 248 1.70e-11 66.2
MS.gene35331.t1 AT3G12220 30.675 163 95 5 45 195 25 181 2.08e-11 65.9
MS.gene35331.t1 AT2G22970 26.991 226 131 8 34 242 40 248 2.47e-11 65.9
MS.gene35331.t1 AT1G73310 26.293 232 131 10 34 245 48 259 3.72e-11 65.1
MS.gene35331.t1 AT1G73310 26.293 232 131 10 34 245 48 259 5.13e-11 64.7
MS.gene35331.t1 AT2G22980 22.703 370 233 14 34 388 41 372 9.32e-11 63.9

Find 87 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCTTACCACATAGTCTTC+TGG 0.181107 2.1:+17001424 None:intergenic
CTTTGTGACACCATTTAATA+AGG 0.235411 2.1:+17000831 None:intergenic
ACAAACTTACGTAATATTCT+TGG 0.277759 2.1:+17000789 None:intergenic
TTTCTCACCTCAGCAATTCT+TGG 0.278398 2.1:+17000627 None:intergenic
GATCTAGACACCTTATTAAA+TGG 0.279796 2.1:-17000841 MS.gene35331:CDS
GAAATTCCTTGGCTCCAAAT+TGG 0.297340 2.1:+17002501 None:intergenic
TGAATTTAACAGGGTGGTTC+AGG 0.297436 2.1:-17002565 MS.gene35331:intron
CAAGTATCCAATAGAAGTTT+AGG 0.309556 2.1:+17000085 None:intergenic
ATGAAAACCTAAACTTCTAT+TGG 0.312505 2.1:-17000092 MS.gene35331:CDS
TGGTCCTCTTGATGCCAATT+TGG 0.315573 2.1:-17002515 MS.gene35331:CDS
TTCTTACCACATAGTCTTCT+GGG 0.318865 2.1:+17001425 None:intergenic
GCCAATCATTCTCTGGTTGC+AGG 0.324301 2.1:-17002686 MS.gene35331:CDS
GGTGGTTCAGGAGTTGGATT+TGG 0.332535 2.1:-17002553 MS.gene35331:CDS
TTTGTCACTCTTGTATTCCT+TGG 0.347875 2.1:-17003148 MS.gene35331:CDS
GGAAAATTTGCTGCTACTCT+TGG 0.354637 2.1:-17002013 MS.gene35331:CDS
CTCAACCAAGTGAAATTCCT+TGG 0.361943 2.1:+17002490 None:intergenic
TGAAGATGGATTAGAAGAAT+GGG 0.371841 2.1:-17003086 MS.gene35331:CDS
GTGAAGATGGATTAGAAGAA+TGG 0.379824 2.1:-17003087 MS.gene35331:CDS
AAAAGCAGATTTGCTATTTG+TGG 0.380443 2.1:-17002467 MS.gene35331:intron
TCACAGAAGCACACATGTTC+TGG 0.387689 2.1:-17002756 MS.gene35331:intron
GTTGATGAGTTGCTAGCTCT+TGG 0.389681 2.1:-17000485 MS.gene35331:CDS
CTTGACATGTCTTTCAAAAG+AGG 0.392714 2.1:+17001312 None:intergenic
CAAACTTACGTAATATTCTT+GGG 0.412359 2.1:+17000790 None:intergenic
CCCTGCAACCAGAGAATGAT+TGG 0.421423 2.1:+17002685 None:intergenic
CTTTCACTTCCGCAATATAG+AGG 0.424690 2.1:+17000141 None:intergenic
GAGCCAAGATTCAGTTCCCT+TGG 0.431242 2.1:+17000320 None:intergenic
ATATGACTTAAAGAAGCCTT+TGG 0.433079 2.1:+17000113 None:intergenic
TAGCAATAGCAGCAACTTTG+TGG 0.433976 2.1:-17001095 MS.gene35331:intron
AAACTGAACCCTGTACCAAC+TGG 0.435888 2.1:+17002172 None:intergenic
GCTATGCATGGCTGATCAAT+AGG 0.438784 2.1:+16999895 None:intergenic
CAACCAAGGGAACTGAATCT+TGG 0.446046 2.1:-17000323 MS.gene35331:CDS
ATTTGACATTGCAGTTCTCA+TGG 0.458928 2.1:-17001338 MS.gene35331:intron
TAGGACAATCCAGTTGGTAC+AGG 0.460572 2.1:-17002181 MS.gene35331:CDS
TAACAGGGTGGTTCAGGAGT+TGG 0.461150 2.1:-17002559 MS.gene35331:intron
TTGACAACAGTTTGGCAGAA+AGG 0.461153 2.1:-17001189 MS.gene35331:intron
TTATCAATGCAACTTCTACA+TGG 0.477050 2.1:-17001138 MS.gene35331:CDS
AGCCATGGCCAATCATTCTC+TGG 0.493120 2.1:-17002693 MS.gene35331:CDS
GAGAATGATTGGCCATGGCT+TGG 0.495127 2.1:+17002696 None:intergenic
TGTTACTTGTGTAGATGGCC+AGG 0.495826 2.1:-17000195 MS.gene35331:intron
GGAGGGATTCTCCACTCTGA+AGG 0.508853 2.1:+17002717 None:intergenic
ATATACTATCTTCAAGCCGC+TGG 0.518830 2.1:+16999841 None:intergenic
GGTGCTTTGAAGAGTGAAGA+TGG 0.519458 2.1:-17003100 MS.gene35331:CDS
ATGATTGGCCATGGCTTGGA+GGG 0.520573 2.1:+17002700 None:intergenic
ATTAGATGAAGTAAGATACT+TGG 0.520640 2.1:+17000876 None:intergenic
TTCTATTGGATACTTGATGC+TGG 0.524231 2.1:-17000078 MS.gene35331:CDS
GTGTGGTATTAGCAGACAGC+TGG 0.524572 2.1:-17001453 MS.gene35331:CDS
TCTCTTCTCAATTGTTGATG+AGG 0.525067 2.1:+17000930 None:intergenic
AATGATTGGCCATGGCTTGG+AGG 0.533677 2.1:+17002699 None:intergenic
TTGATGCCAATTTGGAGCCA+AGG 0.533958 2.1:-17002507 MS.gene35331:CDS
ATCAAGCAACAACTTGAAGC+TGG 0.544410 2.1:-17001166 MS.gene35331:CDS
TTTGACATTGCAGTTCTCAT+GGG 0.549489 2.1:-17001337 MS.gene35331:intron
TGATCTCATTTGTGCAACCA+AGG 0.557323 2.1:-17000337 MS.gene35331:CDS
AAGAATTGATGACAATGGAC+TGG 0.557515 2.1:-17001292 MS.gene35331:CDS
GGAAGATTGAAGACTACACT+TGG 0.562346 2.1:-17001962 MS.gene35331:CDS
AATATATAGGACAATCCAGT+TGG 0.566074 2.1:-17002187 MS.gene35331:intron
CCAATCATTCTCTGGTTGCA+GGG 0.566202 2.1:-17002685 MS.gene35331:CDS
TGGAGCCAAGGAATTTCACT+TGG 0.566368 2.1:-17002495 MS.gene35331:CDS
GAGGGATTCTCCACTCTGAA+GGG 0.578265 2.1:+17002718 None:intergenic
AACCAGAGAATGATTGGCCA+TGG 0.587974 2.1:+17002691 None:intergenic
GATCTCATTTGTGCAACCAA+GGG 0.589058 2.1:-17000336 MS.gene35331:CDS
GGCTCCAAATTGGCATCAAG+AGG 0.589597 2.1:+17002511 None:intergenic
GAAGATGGATTAGAAGAATG+GGG 0.592964 2.1:-17003085 MS.gene35331:CDS
TGCATAGCACTAAACATGGT+GGG 0.593720 2.1:-16999880 MS.gene35331:CDS
GACAGAACTCCTCTATATTG+CGG 0.597836 2.1:-17000150 MS.gene35331:CDS
TGGAGAATCCCTCCAAGCCA+TGG 0.599073 2.1:-17002708 MS.gene35331:CDS
TTGACATTGCAGTTCTCATG+GGG 0.607924 2.1:-17001336 MS.gene35331:intron
CCTCATAAAATAAGAAACCA+AGG 0.609247 2.1:+17003131 None:intergenic
TATGAAACCAAGAATTGCTG+AGG 0.611925 2.1:-17000634 MS.gene35331:intron
ACTTGTCAAAACTGATGAGG+AGG 0.613052 2.1:-17002131 MS.gene35331:CDS
TGCAATTACACAGTCACCAG+CGG 0.617459 2.1:-16999857 MS.gene35331:CDS
ATTACTTGTCAAAACTGATG+AGG 0.618007 2.1:-17002134 MS.gene35331:CDS
CAGAAGCACACATGTTCTGG+TGG 0.633017 2.1:-17002753 MS.gene35331:CDS
AGATTGAAGACTACACTTGG+AGG 0.634315 2.1:-17001959 MS.gene35331:intron
AGGACAATCCAGTTGGTACA+GGG 0.637361 2.1:-17002180 MS.gene35331:CDS
GATCTCCCCAGAAGACTATG+TGG 0.641298 2.1:-17001431 MS.gene35331:intron
TCTTACCACATAGTCTTCTG+GGG 0.642606 2.1:+17001426 None:intergenic
GCCATGCATAGCACTAAACA+TGG 0.646630 2.1:-16999884 MS.gene35331:CDS
TAATAGTGTAGTCAAGTCAG+TGG 0.648733 2.1:+17002105 None:intergenic
GTCAATGTAACTGTGTACAA+TGG 0.655505 2.1:-17000461 MS.gene35331:CDS
ATGTCAAGAATTGATGACAA+TGG 0.657978 2.1:-17001297 MS.gene35331:CDS
ATGCATAGCACTAAACATGG+TGG 0.666932 2.1:-16999881 MS.gene35331:CDS
TTACAAAAGTCCCTTCAGAG+TGG 0.669530 2.1:-17002728 MS.gene35331:CDS
ACCATGTTTAGTGCTATGCA+TGG 0.680684 2.1:+16999883 None:intergenic
ATCATTCTCTGGTTGCAGGG+AGG 0.688272 2.1:-17002682 MS.gene35331:CDS
GGAAGTGAAAGAAAGACCAA+AGG 0.702647 2.1:-17000129 MS.gene35331:CDS
TATTCAAAGAAATATCAATG+AGG 0.703117 2.1:-17000906 MS.gene35331:CDS
AATTGCTGACAGATGGTATG+CGG 0.759275 2.1:-17000694 MS.gene35331:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTTGTTATTATAATATAT+AGG - chr2.1:17000821-17000840 MS.gene35331:CDS 10.0%
!! ATAACACAATTCAAAATAAA+TGG + chr2.1:17000246-17000265 None:intergenic 15.0%
!! TAAACATATATTTATCTAGT+TGG - chr2.1:17001172-17001191 MS.gene35331:CDS 15.0%
!! TCAAATTATTGAATTTAACA+GGG - chr2.1:17000447-17000466 MS.gene35331:intron 15.0%
!! TGTAAGTATTATTTGAATTA+GGG - chr2.1:17000365-17000384 MS.gene35331:intron 15.0%
!! TTCAAATTATTGAATTTAAC+AGG - chr2.1:17000446-17000465 MS.gene35331:intron 15.0%
!! TTTATAGATGAAAAATTTCA+AGG + chr2.1:17001099-17001118 None:intergenic 15.0%
!!! AAATGTAATTTGTTCATTTT+TGG - chr2.1:17000972-17000991 MS.gene35331:CDS 15.0%
!!! AAATTTTTCATCTATAAATG+TGG - chr2.1:17001101-17001120 MS.gene35331:CDS 15.0%
!!! AATGTAATTTGTTCATTTTT+GGG - chr2.1:17000973-17000992 MS.gene35331:CDS 15.0%
!!! TAAGGATTTCTATAATTTTA+TGG - chr2.1:17002044-17002063 MS.gene35331:CDS 15.0%
!!! TATGTGATTGAAATTTTTTT+AGG - chr2.1:17002358-17002377 MS.gene35331:intron 15.0%
!! AAATACAAAGAATTCAAACT+AGG + chr2.1:17000070-17000089 None:intergenic 20.0%
!! AATACAAAGAATTCAAACTA+GGG + chr2.1:17000069-17000088 None:intergenic 20.0%
!! AATGATTAATACTAGAAGAT+GGG + chr2.1:17001790-17001809 None:intergenic 20.0%
!! AGTATTAATCATTGTATTGT+AGG - chr2.1:17001797-17001816 MS.gene35331:intron 20.0%
!! CTAATTCAAATAATACTTAC+AGG + chr2.1:17000366-17000385 None:intergenic 20.0%
!! CTGTAAGTATTATTTGAATT+AGG - chr2.1:17000364-17000383 MS.gene35331:intron 20.0%
!! GAAAAAACTAAACTGAAAAT+TGG - chr2.1:17001448-17001467 MS.gene35331:CDS 20.0%
!! TACTAATAGAAAAGAACAAT+CGG + chr2.1:17002631-17002650 None:intergenic 20.0%
!! TATTCAAAGAAATATCAATG+AGG - chr2.1:17002115-17002134 MS.gene35331:CDS 20.0%
!! TTAACTAATTAGAACAAGTT+TGG - chr2.1:17002421-17002440 MS.gene35331:intron 20.0%
!!! AAAGAAGCACATTTTTTTTT+AGG + chr2.1:17003024-17003043 None:intergenic 20.0%
!!! AAATTACATTTTTGTAGACT+TGG + chr2.1:17000963-17000982 None:intergenic 20.0%
!!! AATGTGCTTCTTTTTTAATA+TGG - chr2.1:17003031-17003050 MS.gene35331:intron 20.0%
!!! AGTAATATATTTAGCTTACT+AGG + chr2.1:16999978-16999997 None:intergenic 20.0%
!!! AGTGTTCTTTTTAAAAAACT+CGG - chr2.1:17002590-17002609 MS.gene35331:intron 20.0%
!!! ATGTAATTTGTTCATTTTTG+GGG - chr2.1:17000974-17000993 MS.gene35331:CDS 20.0%
!!! GTTACCGATTTTTAAAATTA+TGG - chr2.1:17000190-17000209 MS.gene35331:intron 20.0%
!!! TACGCCATAATTTTAAAAAT+CGG + chr2.1:17000197-17000216 None:intergenic 20.0%
!!! TGCTATTTTTATCCAAATTT+AGG - chr2.1:17001546-17001565 MS.gene35331:intron 20.0%
! AAAATTGAGTTACACAAATC+AGG + chr2.1:17000596-17000615 None:intergenic 25.0%
! AATTAATGTTGAGAACATCT+TGG + chr2.1:17001638-17001657 None:intergenic 25.0%
! AATTATTGAATTTAACAGGG+TGG - chr2.1:17000450-17000469 MS.gene35331:intron 25.0%
! ACAAACTTACGTAATATTCT+TGG + chr2.1:17002235-17002254 None:intergenic 25.0%
! ACACGATCAATTTAAAAGTT+TGG + chr2.1:17000032-17000051 None:intergenic 25.0%
! AGTTTGGAAAATATTCATCA+CGG - chr2.1:17002437-17002456 MS.gene35331:intron 25.0%
! ATGAAAACCTAAACTTCTAT+TGG - chr2.1:17002929-17002948 MS.gene35331:intron 25.0%
! ATTAATGTTGAGAACATCTT+GGG + chr2.1:17001637-17001656 None:intergenic 25.0%
! ATTAGATGAAGTAAGATACT+TGG + chr2.1:17002148-17002167 None:intergenic 25.0%
! CAAACTTACGTAATATTCTT+GGG + chr2.1:17002234-17002253 None:intergenic 25.0%
! CAATGATTAATACTAGAAGA+TGG + chr2.1:17001791-17001810 None:intergenic 25.0%
! CTCAATATGTGTTATCATTA+AGG - chr2.1:17000166-17000185 MS.gene35331:CDS 25.0%
! GTGTTAAGAATAGTACTATA+TGG - chr2.1:17001508-17001527 MS.gene35331:intron 25.0%
! TGTCCATGTATAATTTACTT+GGG - chr2.1:17003088-17003107 MS.gene35331:CDS 25.0%
! TTCACAAACACATAAAAACA+TGG + chr2.1:17000419-17000438 None:intergenic 25.0%
! TTGTCCATGTATAATTTACT+TGG - chr2.1:17003087-17003106 MS.gene35331:CDS 25.0%
! TTTGAATTAACGGTGAATTT+AGG + chr2.1:17000694-17000713 None:intergenic 25.0%
! TTTGCCTATGTTTAGAAAAA+CGG - chr2.1:17000613-17000632 MS.gene35331:intron 25.0%
!! ATATATAGTGTTTGAGATGA+TGG + chr2.1:17002988-17003007 None:intergenic 25.0%
!! CTTTCCTCAAAAAGTTTTTA+AGG + chr2.1:17002852-17002871 None:intergenic 25.0%
!! GGATTTCTATAATTTTATGG+AGG - chr2.1:17002047-17002066 MS.gene35331:CDS 25.0%
!! TATAATTTTATGGAGGACAA+TGG - chr2.1:17002054-17002073 MS.gene35331:CDS 25.0%
!! TTTGGAAATTTTGTAGAGTT+TGG - chr2.1:17000486-17000505 MS.gene35331:CDS 25.0%
!! TTTTTATCCAAATTTAGGTG+TGG - chr2.1:17001551-17001570 MS.gene35331:intron 25.0%
!!! ATGGATTTTGACTTACAAAA+TGG + chr2.1:17002969-17002988 None:intergenic 25.0%
!!! CTTGGTTTCTTATTTTATGA+GGG - chr2.1:16999891-16999910 MS.gene35331:CDS 25.0%
!!! TCCTTTTTTAATTGCATTGA+GGG + chr2.1:17001042-17001061 None:intergenic 25.0%
!!! TGCTTTGATTTTCTAAACTT+AGG - chr2.1:17002476-17002495 MS.gene35331:CDS 25.0%
!!! TTATTTTATGAGGGAAAAGT+TGG - chr2.1:16999900-16999919 MS.gene35331:CDS 25.0%
!!! TTCCTTTTTTAATTGCATTG+AGG + chr2.1:17001043-17001062 None:intergenic 25.0%
!!! TTTTTAAAAAACTCGGTATC+CGG - chr2.1:17002597-17002616 MS.gene35331:intron 25.0%
!!! TTTTTTGTTGTTGCATACTT+TGG - chr2.1:17000741-17000760 MS.gene35331:intron 25.0%
AATATATAGGACAATCCAGT+TGG - chr2.1:17000834-17000853 MS.gene35331:CDS 30.0%
AGAAAAGAACAATCGGTATT+TGG + chr2.1:17002624-17002643 None:intergenic 30.0%
ATATGACTTAAAGAAGCCTT+TGG + chr2.1:17002911-17002930 None:intergenic 30.0%
ATCTCATGTTTGTGTGTTTA+AGG - chr2.1:17002026-17002045 MS.gene35331:CDS 30.0%
ATTACTTGTCAAAACTGATG+AGG - chr2.1:17000887-17000906 MS.gene35331:CDS 30.0%
ATTGCAAGAAACATGAGATT+AGG + chr2.1:17002310-17002329 None:intergenic 30.0%
CAAGTATCCAATAGAAGTTT+AGG + chr2.1:17002939-17002958 None:intergenic 30.0%
CCTCATAAAATAAGAAACCA+AGG + chr2.1:16999893-16999912 None:intergenic 30.0%
CTGATGCATGTTTGAATTAA+CGG + chr2.1:17000704-17000723 None:intergenic 30.0%
CTTTGTGACACCATTTAATA+AGG + chr2.1:17002193-17002212 None:intergenic 30.0%
GAAAAGAACAATCGGTATTT+GGG + chr2.1:17002623-17002642 None:intergenic 30.0%
GATCTAGACACCTTATTAAA+TGG - chr2.1:17002180-17002199 MS.gene35331:CDS 30.0%
GGTGAATTTAGGAAAATTTC+TGG + chr2.1:17000683-17000702 None:intergenic 30.0%
TGACCCAAGTAAATTATACA+TGG + chr2.1:17003094-17003113 None:intergenic 30.0%
TTAATGTTGAGAACATCTTG+GGG + chr2.1:17001636-17001655 None:intergenic 30.0%
TTACAGTGATACCGTAATTA+CGG - chr2.1:17000650-17000669 MS.gene35331:CDS 30.0%
TTATCAATGCAACTTCTACA+TGG - chr2.1:17001883-17001902 MS.gene35331:intron 30.0%
TTCGAATTAAAGTGTGCTTT+AGG - chr2.1:17000142-17000161 MS.gene35331:CDS 30.0%
TTGCAAGAAACATGAGATTA+GGG + chr2.1:17002309-17002328 None:intergenic 30.0%
! ATGTCAAGAATTGATGACAA+TGG - chr2.1:17001724-17001743 MS.gene35331:intron 30.0%
! GAAATGGTTTGAAATGCATA+CGG - chr2.1:17001251-17001270 MS.gene35331:intron 30.0%
! GAAATGGTTTGAAATGCATA+TGG - chr2.1:17001251-17001270 MS.gene35331:intron 30.0%
!! AAAAGCAGATTTGCTATTTG+TGG - chr2.1:17000554-17000573 MS.gene35331:intron 30.0%
!! ACATGATTTTGACAACAGTT+TGG - chr2.1:17001824-17001843 MS.gene35331:intron 30.0%
!! GAGATTAGGGTTTTAATCAT+TGG + chr2.1:17002296-17002315 None:intergenic 30.0%
!! GTTTCTAGTTTGATTCTATC+AGG - chr2.1:17002514-17002533 MS.gene35331:CDS 30.0%
!! TGAAGATGGATTAGAAGAAT+GGG - chr2.1:16999935-16999954 MS.gene35331:intron 30.0%
!! TTCACCGTTTTTCTAAACAT+AGG + chr2.1:17000620-17000639 None:intergenic 30.0%
!!! ACTTTGGTTCTTTTCTTTGA+GGG - chr2.1:17000757-17000776 MS.gene35331:intron 30.0%
!!! CCTTGGTTTCTTATTTTATG+AGG - chr2.1:16999890-16999909 MS.gene35331:CDS 30.0%
!!! TACTTTGGTTCTTTTCTTTG+AGG - chr2.1:17000756-17000775 MS.gene35331:intron 30.0%
!!! TTTTGTGTTACTTGTGTAGA+TGG - chr2.1:17002821-17002840 MS.gene35331:intron 30.0%
ATTTATTCTCCCCTCAACTT+TGG - chr2.1:17002753-17002772 MS.gene35331:CDS 35.0%
ATTTGACATTGCAGTTCTCA+TGG - chr2.1:17001683-17001702 MS.gene35331:intron 35.0%
CTTGACATGTCTTTCAAAAG+AGG + chr2.1:17001712-17001731 None:intergenic 35.0%
GCCCTCAATGCAATTAAAAA+AGG - chr2.1:17001038-17001057 MS.gene35331:intron 35.0%
GCTAATACCACACCTAAATT+TGG + chr2.1:17001561-17001580 None:intergenic 35.0%
GGGGAGAATAAATAAATGAG+AGG + chr2.1:17002746-17002765 None:intergenic 35.0%
GTCAATGTAACTGTGTACAA+TGG - chr2.1:17002560-17002579 MS.gene35331:intron 35.0%
TAATAGTGTAGTCAAGTCAG+TGG + chr2.1:17000919-17000938 None:intergenic 35.0%
TATGAAACCAAGAATTGCTG+AGG - chr2.1:17002387-17002406 MS.gene35331:intron 35.0%
TCTCTTCTCAATTGTTGATG+AGG + chr2.1:17002094-17002113 None:intergenic 35.0%
TTCTATTGGATACTTGATGC+TGG - chr2.1:17002943-17002962 MS.gene35331:intron 35.0%
TTCTTACCACATAGTCTTCT+GGG + chr2.1:17001599-17001618 None:intergenic 35.0%
TTTACTTGGGTCATTGTTGT+AGG - chr2.1:17003101-17003120 MS.gene35331:CDS 35.0%
TTTGACATTGCAGTTCTCAT+GGG - chr2.1:17001684-17001703 MS.gene35331:intron 35.0%
TTTGCTTTCACCAAAGTTGA+GGG + chr2.1:17002766-17002785 None:intergenic 35.0%
TTTGTCACTCTTGTATTCCT+TGG - chr2.1:16999873-16999892 MS.gene35331:CDS 35.0%
! AAACCATTTCGCCTTTTATC+AGG + chr2.1:17001241-17001260 None:intergenic 35.0%
! AAGAATTGATGACAATGGAC+TGG - chr2.1:17001729-17001748 MS.gene35331:intron 35.0%
! CAGGCCTTAAAAACTTTTTG+AGG - chr2.1:17002845-17002864 MS.gene35331:intron 35.0%
! TTTTATCAGGACTTGTGCTT+GGG + chr2.1:17001228-17001247 None:intergenic 35.0%
!! GAAGATGGATTAGAAGAATG+GGG - chr2.1:16999936-16999955 MS.gene35331:intron 35.0%
!! GTGAAGATGGATTAGAAGAA+TGG - chr2.1:16999934-16999953 MS.gene35331:intron 35.0%
!! TTCATTTTTGGGGAGTCTTA+TGG - chr2.1:17000984-17001003 MS.gene35331:intron 35.0%
!!! CTCAAAAAGTTTTTAAGGCC+TGG + chr2.1:17002847-17002866 None:intergenic 35.0%
AATTGCTGACAGATGGTATG+CGG - chr2.1:17002327-17002346 MS.gene35331:intron 40.0%
ACCATGTTTAGTGCTATGCA+TGG + chr2.1:17003141-17003160 None:intergenic 40.0%
ACTTGTCAAAACTGATGAGG+AGG - chr2.1:17000890-17000909 MS.gene35331:CDS 40.0%
AGATTGAAGACTACACTTGG+AGG - chr2.1:17001062-17001081 MS.gene35331:intron 40.0%
AGTCATAGGAAAGAGCGAAA+TGG - chr2.1:17001297-17001316 MS.gene35331:CDS 40.0%
AGTCCTGATAAAAGGCGAAA+TGG - chr2.1:17001235-17001254 MS.gene35331:intron 40.0%
ATCAAGCAACAACTTGAAGC+TGG - chr2.1:17001855-17001874 MS.gene35331:intron 40.0%
ATGCATAGCACTAAACATGG+TGG - chr2.1:17003140-17003159 MS.gene35331:CDS 40.0%
CAAGCACAAGTCCTGATAAA+AGG - chr2.1:17001227-17001246 MS.gene35331:intron 40.0%
CTCAACCAAGTGAAATTCCT+TGG + chr2.1:17000534-17000553 None:intergenic 40.0%
CTGGTGAGTAACCGTAATTA+CGG + chr2.1:17000664-17000683 None:intergenic 40.0%
CTTTCACTTCCGCAATATAG+AGG + chr2.1:17002883-17002902 None:intergenic 40.0%
GAAATTCCTTGGCTCCAAAT+TGG + chr2.1:17000523-17000542 None:intergenic 40.0%
GACAGAACTCCTCTATATTG+CGG - chr2.1:17002871-17002890 MS.gene35331:intron 40.0%
GATCTCATTTGTGCAACCAA+GGG - chr2.1:17002685-17002704 MS.gene35331:CDS 40.0%
GGAAGATTGAAGACTACACT+TGG - chr2.1:17001059-17001078 MS.gene35331:intron 40.0%
GGAAGTGAAAGAAAGACCAA+AGG - chr2.1:17002892-17002911 MS.gene35331:intron 40.0%
GTTCTTACCACATAGTCTTC+TGG + chr2.1:17001600-17001619 None:intergenic 40.0%
GTTTGCTTTCACCAAAGTTG+AGG + chr2.1:17002767-17002786 None:intergenic 40.0%
TAGCAATAGCAGCAACTTTG+TGG - chr2.1:17001926-17001945 MS.gene35331:intron 40.0%
TCTTACCACATAGTCTTCTG+GGG + chr2.1:17001598-17001617 None:intergenic 40.0%
TCTTTCCTATGACTCGTGTT+TGG + chr2.1:17001291-17001310 None:intergenic 40.0%
TGAATTTAACAGGGTGGTTC+AGG - chr2.1:17000456-17000475 MS.gene35331:intron 40.0%
TGATCTCATTTGTGCAACCA+AGG - chr2.1:17002684-17002703 MS.gene35331:CDS 40.0%
TGCATAGCACTAAACATGGT+GGG - chr2.1:17003141-17003160 MS.gene35331:CDS 40.0%
TTACAAAAGTCCCTTCAGAG+TGG - chr2.1:17000293-17000312 MS.gene35331:intron 40.0%
TTCTTGCAATTGCTGACAGA+TGG - chr2.1:17002320-17002339 MS.gene35331:intron 40.0%
TTGACAACAGTTTGGCAGAA+AGG - chr2.1:17001832-17001851 MS.gene35331:intron 40.0%
TTGACATTGCAGTTCTCATG+GGG - chr2.1:17001685-17001704 MS.gene35331:intron 40.0%
TTGCTTTCACCAAAGTTGAG+GGG + chr2.1:17002765-17002784 None:intergenic 40.0%
TTTATCAGGACTTGTGCTTG+GGG + chr2.1:17001227-17001246 None:intergenic 40.0%
TTTCTCACCTCAGCAATTCT+TGG + chr2.1:17002397-17002416 None:intergenic 40.0%
! ATGGTTTGAAATGCATACGG+CGG - chr2.1:17001316-17001335 MS.gene35331:CDS 40.0%
! CTTTTATCAGGACTTGTGCT+TGG + chr2.1:17001229-17001248 None:intergenic 40.0%
!! ATTTTTGGGGAGTCTTATGG+TGG - chr2.1:17000987-17001006 MS.gene35331:intron 40.0%
!! GGAAAATTTGCTGCTACTCT+TGG - chr2.1:17001008-17001027 MS.gene35331:intron 40.0%
!! GGTTCTTTTCTTTGAGGGTA+AGG - chr2.1:17000762-17000781 MS.gene35331:intron 40.0%
!!! TACAGGGTTCAGTTTTGTTG+AGG - chr2.1:17000857-17000876 MS.gene35331:CDS 40.0%
AAACTGAACCCTGTACCAAC+TGG + chr2.1:17000852-17000871 None:intergenic 45.0%
AGAACAATCGGTATTTGGGC+CGG + chr2.1:17002619-17002638 None:intergenic 45.0%
CAACCAAGGGAACTGAATCT+TGG - chr2.1:17002698-17002717 MS.gene35331:CDS 45.0%
CCAATCATTCTCTGGTTGCA+GGG - chr2.1:17000336-17000355 MS.gene35331:CDS 45.0%
GCCATGCATAGCACTAAACA+TGG - chr2.1:17003137-17003156 MS.gene35331:CDS 45.0%
GCTATGCATGGCTGATCAAT+AGG + chr2.1:17003129-17003148 None:intergenic 45.0%
TCCTATGACTCGTGTTTGGA+GGG + chr2.1:17001287-17001306 None:intergenic 45.0%
TGCAATTACACAGTCACCAG+CGG - chr2.1:17003164-17003183 MS.gene35331:CDS 45.0%
TGGAGCCAAGGAATTTCACT+TGG - chr2.1:17000526-17000545 MS.gene35331:intron 45.0%
TGGAGTCTGTCCAAACATAC+CGG - chr2.1:17001192-17001211 MS.gene35331:intron 45.0%
TGGTCCTCTTGATGCCAATT+TGG - chr2.1:17000506-17000525 MS.gene35331:intron 45.0%
TTATCAGGACTTGTGCTTGG+GGG + chr2.1:17001226-17001245 None:intergenic 45.0%
TTCCTATGACTCGTGTTTGG+AGG + chr2.1:17001288-17001307 None:intergenic 45.0%
! AACCAGAGAATGATTGGCCA+TGG + chr2.1:17000333-17000352 None:intergenic 45.0%
! AGGACAATCCAGTTGGTACA+GGG - chr2.1:17000841-17000860 MS.gene35331:CDS 45.0%
! GTTGATGAGTTGCTAGCTCT+TGG - chr2.1:17002536-17002555 MS.gene35331:CDS 45.0%
! TAGGACAATCCAGTTGGTAC+AGG - chr2.1:17000840-17000859 MS.gene35331:CDS 45.0%
! TCACAGAAGCACACATGTTC+TGG - chr2.1:17000265-17000284 MS.gene35331:intron 45.0%
! TGTTACTTGTGTAGATGGCC+AGG - chr2.1:17002826-17002845 MS.gene35331:intron 45.0%
! TTGATGCCAATTTGGAGCCA+AGG - chr2.1:17000514-17000533 MS.gene35331:intron 45.0%
!! GGTGCTTTGAAGAGTGAAGA+TGG - chr2.1:16999921-16999940 MS.gene35331:intron 45.0%
!!! TTTTTTAAAAAAACATTATA+AGG - chr2.1:17001351-17001370 MS.gene35331:intron 5.0%
!!! TTTTTTAAAAAAGATTTTAT+TGG + chr2.1:17001343-17001362 None:intergenic 5.0%
AGCCATGGCCAATCATTCTC+TGG - chr2.1:17000328-17000347 MS.gene35331:CDS 50.0%
ATCATTCTCTGGTTGCAGGG+AGG - chr2.1:17000339-17000358 MS.gene35331:CDS 50.0%
CCCTGCAACCAGAGAATGAT+TGG + chr2.1:17000339-17000358 None:intergenic 50.0%
GAGCCAAGATTCAGTTCCCT+TGG + chr2.1:17002704-17002723 None:intergenic 50.0%
GAGGGATTCTCCACTCTGAA+GGG + chr2.1:17000306-17000325 None:intergenic 50.0%
GATCTCCCCAGAAGACTATG+TGG - chr2.1:17001590-17001609 MS.gene35331:intron 50.0%
GCCAATCATTCTCTGGTTGC+AGG - chr2.1:17000335-17000354 MS.gene35331:CDS 50.0%
GGCTCCAAATTGGCATCAAG+AGG + chr2.1:17000513-17000532 None:intergenic 50.0%
GGTGGTTCAGGAGTTGGATT+TGG - chr2.1:17000468-17000487 MS.gene35331:CDS 50.0%
GTGTGGTATTAGCAGACAGC+TGG - chr2.1:17001568-17001587 MS.gene35331:intron 50.0%
TAACAGGGTGGTTCAGGAGT+TGG - chr2.1:17000462-17000481 MS.gene35331:CDS 50.0%
TATCAGGACTTGTGCTTGGG+GGG + chr2.1:17001225-17001244 None:intergenic 50.0%
! AATGATTGGCCATGGCTTGG+AGG + chr2.1:17000325-17000344 None:intergenic 50.0%
! ATGATTGGCCATGGCTTGGA+GGG + chr2.1:17000324-17000343 None:intergenic 50.0%
! CAGAAGCACACATGTTCTGG+TGG - chr2.1:17000268-17000287 MS.gene35331:intron 50.0%
! GAGAATGATTGGCCATGGCT+TGG + chr2.1:17000328-17000347 None:intergenic 50.0%
ATCAGGACTTGTGCTTGGGG+GGG + chr2.1:17001224-17001243 None:intergenic 55.0%
GCCCTCCAAACACGAGTCAT+AGG - chr2.1:17001283-17001302 MS.gene35331:CDS 55.0%
GGAGGGATTCTCCACTCTGA+AGG + chr2.1:17000307-17000326 None:intergenic 55.0%
TGGAGAATCCCTCCAAGCCA+TGG - chr2.1:17000313-17000332 MS.gene35331:CDS 55.0%
GACTCGTGTTTGGAGGGCTG+TGG + chr2.1:17001281-17001300 None:intergenic 60.0%
GGGGCGTGGACCGGTATGTT+TGG + chr2.1:17001205-17001224 None:intergenic 65.0%
GACTTGTGCTTGGGGGGGCG+TGG + chr2.1:17001219-17001238 None:intergenic 70.0%
! GTGCTTGGGGGGGCGTGGAC+CGG + chr2.1:17001214-17001233 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 16999852 17003191 16999852 ID=MS.gene35331
chr2.1 mRNA 16999852 17003191 16999852 ID=MS.gene35331.t1;Parent=MS.gene35331
chr2.1 exon 17003065 17003191 17003065 ID=MS.gene35331.t1.exon1;Parent=MS.gene35331.t1
chr2.1 CDS 17003065 17003191 17003065 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
chr2.1 exon 17002678 17002772 17002678 ID=MS.gene35331.t1.exon2;Parent=MS.gene35331.t1
chr2.1 CDS 17002678 17002772 17002678 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
chr2.1 exon 17002468 17002575 17002468 ID=MS.gene35331.t1.exon3;Parent=MS.gene35331.t1
chr2.1 CDS 17002468 17002575 17002468 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
chr2.1 exon 17001960 17002200 17001960 ID=MS.gene35331.t1.exon4;Parent=MS.gene35331.t1
chr2.1 CDS 17001960 17002200 17001960 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
chr2.1 exon 17001432 17001475 17001432 ID=MS.gene35331.t1.exon5;Parent=MS.gene35331.t1
chr2.1 CDS 17001432 17001475 17001432 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
chr2.1 exon 17001279 17001346 17001279 ID=MS.gene35331.t1.exon6;Parent=MS.gene35331.t1
chr2.1 CDS 17001279 17001346 17001279 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
chr2.1 exon 17001096 17001201 17001096 ID=MS.gene35331.t1.exon7;Parent=MS.gene35331.t1
chr2.1 CDS 17001096 17001201 17001096 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
chr2.1 exon 17000799 17000995 17000799 ID=MS.gene35331.t1.exon8;Parent=MS.gene35331.t1
chr2.1 CDS 17000799 17000995 17000799 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
chr2.1 exon 17000635 17000704 17000635 ID=MS.gene35331.t1.exon9;Parent=MS.gene35331.t1
chr2.1 CDS 17000635 17000704 17000635 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
chr2.1 exon 17000457 17000507 17000457 ID=MS.gene35331.t1.exon10;Parent=MS.gene35331.t1
chr2.1 CDS 17000457 17000507 17000457 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
chr2.1 exon 17000309 17000361 17000309 ID=MS.gene35331.t1.exon11;Parent=MS.gene35331.t1
chr2.1 CDS 17000309 17000361 17000309 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
chr2.1 exon 17000071 17000203 17000071 ID=MS.gene35331.t1.exon12;Parent=MS.gene35331.t1
chr2.1 CDS 17000071 17000203 17000071 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
chr2.1 exon 16999852 16999920 16999852 ID=MS.gene35331.t1.exon13;Parent=MS.gene35331.t1
chr2.1 CDS 16999852 16999920 16999852 ID=cds.MS.gene35331.t1;Parent=MS.gene35331.t1
Gene Sequence

>MS.gene35331

ATGGAGAAGCTTTATGTGTTTTTTGTCACTCTTGTATTCCTTGGTTTCTTATTTTATGAGGGAAAAGTTGGTGCTTTGAAGAGTGAAGATGGATTAGAAGAATGGGGATATGTGCAAGTTAGACCTAGTAAGCTAAATATATTACTAGAATTGTGTAATTTCATGTTATTGTGTTTTCCAAACTTTTAAATTGATCGTGTCATGATATTGTAAACCCTAGTTTGAATTCTTTGTATTTCACTCATAAGTATAATACTACAATATTATTATTTCTATAAAAAAAAAAATATTTCGAATTAAAGTGTGCTTTAGGTCTCAATATGTGTTATCATTAAGGTGTTACCGATTTTTAAAATTATGGCGTAATTAACTTAAACAATAATTGACATTACCATTTATTTTGAATTGTGTTATCACAGAAGCACACATGTTCTGGTGGCTTTACAAAAGTCCCTTCAGAGTGGAGAATCCCTCCAAGCCATGGCCAATCATTCTCTGGTTGCAGGGAGGACCTGTAAGTATTATTTGAATTAGGGCATGATTTTAATTTTGAACAAGAACAATCCATGTTTTTATGTGTTTGTGAAATGAAGTTTCAAATTATTGAATTTAACAGGGTGGTTCAGGAGTTGGATTTGGAAATTTTGTAGAGTTTGGTCCTCTTGATGCCAATTTGGAGCCAAGGAATTTCACTTGGTTGAGAAAAGCAGATTTGCTATTTGTGGTAACTCAATTTTTTTTCCTGATTTGTGTAACTCAATTTTGCCTATGTTTAGAAAAACGGTGAATTTTATAAAATTACAGTGATACCGTAATTACGGTTACTCACCAGAAATTTTCCTAAATTCACCGTTAATTCAAACATGCATCAGCTAAATCATTTCACTCTTTTTTTGTTGTTGCATACTTTGGTTCTTTTCTTTGAGGGTAAGGTTCTCAACTTCTCATCACTCATATTAAATGCATTTTTTGTTGTTATTATAATATATAGGACAATCCAGTTGGTACAGGGTTCAGTTTTGTTGAGGATTCAAAATTACTTGTCAAAACTGATGAGGAGGCAGCCACTGACTTGACTACACTATTAATCAAGATATTTAATAATGATCCAAGTCTACAAAAATGTAATTTGTTCATTTTTGGGGAGTCTTATGGTGGAAAATTTGCTGCTACTCTTGGATTATCAGCCCTCAATGCAATTAAAAAAGGAAGATTGAAGACTACACTTGGAGGTATTATGATTTCCTTGAAATTTTTCATCTATAAATGTGGTTAGTAATCTCTTCTTTTGATAGATTATGTATTATTTGAATATAGATTTAAACATATATTTATCTAGTTGGAGTCTGTCCAAACATACCGGTCCACGCCCCCCCAAGCACAAGTCCTGATAAAAGGCGAAATGGTTTGAAATGCATATGGCACTCCACAGCCCTCCAAACACGAGTCATAGGAAAGAGCGAAATGGTTTGAAATGCATACGGCGGTCCAATAAAATCTTTTTTAAAAAAACATTATAAGGAATATGAAAACAAACTACTAAAATGATGAAATATAAAAGACTATATAGAAATCATTTCAAAGCAAAAATGAAAAGAAAAAACTAAACTGAAAATTGGATATATCACAAATAAAAATCATATTAAAGTCATAAATGTGTTAAGAATAGTACTATATGGTATTTCTCGACTTTATGCTATTTTTATCCAAATTTAGGTGTGGTATTAGCAGACAGCTGGATCTCCCCAGAAGACTATGTGGTAAGAACAAAAATAATTCTACCCCAAGATGTTCTCAACATTAATTTGAGCTTTCACTTTTTTAGCATTTAATTTGACATTGCAGTTCTCATGGGGTCCTCTTTTGAAAGACATGTCAAGAATTGATGACAATGGACTGGAAAAATCAAACATGTATGTAACATATGTTTTCATTCCCATCTTCTAGTATTAATCATTGTATTGTAGGATTAACATGATTTTGACAACAGTTTGGCAGAAAGGATCAAGCAACAACTTGAAGCTGGTGAATTTATCAATGCAACTTCTACATGGATTCAACTTGAATATGTAATTAGCAATAGCAGCAACTTTGTGGTACTAACTTACATTTTTATTCATAATATATTTAAATTAATAATATAGATTAACTACTAATGAATAATTAATTTATTTATCTCATGTTTGTGTGTTTAAGGATTTCTATAATTTTATGGAGGACAATGGAAGTTATTCAGCAACCTCATCAACAATTGAGAAGAGATTATTCAAAGAAATATCAATGAGGCGTTACTCCAAGTATCTTACTTCATCTAATGTTGTTAATCGTGATCTAGACACCTTATTAAATGGTGTCACAAAGAAAAAATTGAAGATCATTCCCAAGAATATTACGTAAGTTTGTATAAACTATGCAAAATAAAAATAAATGTACTTAGAATTCCAATGATTAAAACCCTAATCTCATGTTTCTTGCAATTGCTGACAGATGGTATGCGGAGTCAGTTTATGTGATTGAAATTTTTTTAGGTGAATTTATGAAACCAAGAATTGCTGAGGTGAGAAAATATTTAACTAATTAGAACAAGTTTGGAAAATATTCATCACGGTTTCTTGTAAAAATTATGCTTTGATTTTCTAAACTTAGGTGATTTCTATTTGATGTTTCTAGTTTGATTCTATCAGGTTGATGAGTTGCTAGCTCTTGGAGTCAATGTAACTGTGTACAATGGACAAGTAAGTGTTCTTTTTAAAAAACTCGGTATCCGGCCCAAATACCGATTGTTCTTTTCTATTAGTAATCTTGCAATTCTTTTTTTTTACTGTTATAGCTTGATCTCATTTGTGCAACCAAGGGAACTGAATCTTGGCTCAAGAAACTCAAGTAAGCAACCTCTCATTTATTTATTCTCCCCTCAACTTTGGTGAAAGCAAACATCAATTTTCATAATTGTATTTTTTTTTATTACTTTTTGTGTTACTTGTGTAGATGGCCAGGCCTTAAAAACTTTTTGAGGAAAGACAGAACTCCTCTATATTGCGGAAGTGAAAGAAAGACCAAAGGCTTCTTTAAGTCATATGAAAACCTAAACTTCTATTGGATACTTGATGCTGGCCATTTTGTAAGTCAAAATCCATCATCTCAAACACTATATATGCTTCTTTTTCTACCTAAAAAAAAATGTGCTTCTTTTTTAATATGGATATAGCTTCTAAGTATTTGTCTATGCTTATCTTTGTCCATGTATAATTTACTTGGGTCATTGTTGTAGGTACCTATTGATCAGCCATGCATAGCACTAAACATGGTGGGTGCAATTACACAGTCACCAGCGGCTTGA
Protein sequence

>MS.gene35331.t1

MEKLYVFFVTLVFLGFLFYEGKVGALKSEDGLEEWGYVQVRPKAHMFWWLYKSPFRVENPSKPWPIILWLQGGPGGSGVGFGNFVEFGPLDANLEPRNFTWLRKADLLFVDNPVGTGFSFVEDSKLLVKTDEEAATDLTTLLIKIFNNDPSLQKCNLFIFGESYGGKFAATLGLSALNAIKKGRLKTTLGGVVLADSWISPEDYVFSWGPLLKDMSRIDDNGLEKSNILAERIKQQLEAGEFINATSTWIQLEYVISNSSNFVDFYNFMEDNGSYSATSSTIEKRLFKEISMRRYSKYLTSSNVVNRDLDTLLNGVTKKKLKIIPKNITWYAESVYVIEIFLGEFMKPRIAEVDELLALGVNVTVYNGQLDLICATKGTESWLKKLKWPGLKNFLRKDRTPLYCGSERKTKGFFKSYENLNFYWILDAGHFVPIDQPCIALNMVGAITQSPAA