Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35422.t1 | XP_003596832.1 | 84.4 | 262 | 40 | 1 | 1 | 262 | 1 | 261 | 7.70E-113 | 416.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35422.t1 | G7ITU4 | 84.4 | 262 | 40 | 1 | 1 | 262 | 1 | 261 | 5.6e-113 | 416.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050122 | MS.gene35422 | 0.812196 | 4.79E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene35422 | 0.800894 | 1.16E-48 | -1.69E-46 |
| MS.gene051588 | MS.gene35422 | 0.804805 | 1.81E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene35422 | 0.822938 | 1.81E-53 | -1.69E-46 |
| MS.gene052414 | MS.gene35422 | 0.85104 | 1.15E-60 | -1.69E-46 |
| MS.gene052485 | MS.gene35422 | 0.810357 | 1.20E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene35422 | 0.819163 | 1.34E-52 | -1.69E-46 |
| MS.gene054183 | MS.gene35422 | 0.823617 | 1.26E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene35422 | 0.822236 | 2.64E-53 | -1.69E-46 |
| MS.gene055369 | MS.gene35422 | 0.80357 | 3.27E-49 | -1.69E-46 |
| MS.gene055744 | MS.gene35422 | 0.804049 | 2.60E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene35422 | 0.803263 | 3.79E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene35422 | 0.808286 | 3.34E-50 | -1.69E-46 |
| MS.gene056514 | MS.gene35422 | 0.814337 | 1.62E-51 | -1.69E-46 |
| MS.gene05664 | MS.gene35422 | 0.802697 | 4.96E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene35422 | 0.824419 | 8.15E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene35422 | 0.812825 | 3.49E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene35422 | 0.820263 | 7.52E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene35422 | 0.817687 | 2.90E-52 | -1.69E-46 |
| MS.gene057825 | MS.gene35422 | 0.830491 | 2.85E-55 | -1.69E-46 |
| MS.gene058376 | MS.gene35422 | 0.810887 | 9.22E-51 | -1.69E-46 |
| MS.gene058948 | MS.gene35422 | 0.801529 | 8.63E-49 | -1.69E-46 |
| MS.gene058949 | MS.gene35422 | 0.801289 | 9.66E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene35422 | 0.842675 | 2.24E-58 | -1.69E-46 |
| MS.gene059462 | MS.gene35422 | 0.807694 | 4.46E-50 | -1.69E-46 |
| MS.gene059876 | MS.gene35422 | 0.820109 | 8.16E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene35422 | 0.80811 | 3.64E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35422.t1 | MTR_2g086590 | 91.603 | 262 | 21 | 1 | 1 | 262 | 1 | 261 | 1.25e-168 | 466 |
| MS.gene35422.t1 | MTR_4g052880 | 38.961 | 231 | 114 | 8 | 1 | 220 | 1 | 215 | 1.36e-33 | 122 |
| MS.gene35422.t1 | MTR_7g113950 | 38.406 | 138 | 78 | 3 | 112 | 247 | 106 | 238 | 4.96e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35422.t1 | AT5G22390 | 33.621 | 232 | 93 | 7 | 1 | 221 | 1 | 182 | 1.65e-21 | 89.7 |
| MS.gene35422.t1 | AT1G54740 | 33.043 | 115 | 74 | 2 | 106 | 219 | 33 | 145 | 7.02e-12 | 64.7 |
Find 69 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCCTGATGATGAGTTTC+TGG | 0.094474 | 2.1:-15550979 | MS.gene35422:CDS |
| GGAAGCCTTGGGTTTATTTC+AGG | 0.176058 | 2.1:-15551109 | MS.gene35422:CDS |
| TTCAGGTCTATTAGGAATAA+TGG | 0.250900 | 2.1:-15551092 | MS.gene35422:CDS |
| TCTTCAAGACATCATTCTTA+TGG | 0.257835 | 2.1:-15551194 | MS.gene35422:CDS |
| GGGTTTATTTCAGGTCTATT+AGG | 0.260287 | 2.1:-15551100 | MS.gene35422:CDS |
| TCCTCCTTTACTGAGATATT+TGG | 0.276616 | 2.1:-15551524 | MS.gene35422:CDS |
| AAGAAGCTGAAGATGGAGTT+TGG | 0.330013 | 2.1:+15551414 | None:intergenic |
| GATGAAGGAGAGAATGATAT+AGG | 0.348515 | 2.1:-15550948 | MS.gene35422:CDS |
| GAAATAAACCCAAGGCTTCC+CGG | 0.351372 | 2.1:+15551112 | None:intergenic |
| AGTAAAGGAGGAGGACTCTA+TGG | 0.362243 | 2.1:+15551535 | None:intergenic |
| CATCTTTGCACCGAAGGTCT+TGG | 0.374924 | 2.1:-15551311 | MS.gene35422:CDS |
| GGTCCTCCCTATGCTTGAAA+TGG | 0.394454 | 2.1:+15551133 | None:intergenic |
| TAGGGAGGACCGGGAAGCCT+TGG | 0.399372 | 2.1:-15551121 | MS.gene35422:CDS |
| CTGTTGGTATGCCTTGCTAT+TGG | 0.401166 | 2.1:+15551380 | None:intergenic |
| TATAAGCACGCAGGACCTCC+TGG | 0.403062 | 2.1:+15551036 | None:intergenic |
| AGGGAGGACCGGGAAGCCTT+GGG | 0.431578 | 2.1:-15551120 | MS.gene35422:CDS |
| TTGATGATGATTCCTTGAAA+TGG | 0.433133 | 2.1:+15551495 | None:intergenic |
| TCTTCCAGAAACTCATCATC+AGG | 0.449345 | 2.1:+15550975 | None:intergenic |
| GAAAGGGATTGAAGCAGTGT+TGG | 0.454932 | 2.1:+15551584 | None:intergenic |
| ATTTGGTGAACTCCATTTCA+AGG | 0.460735 | 2.1:-15551507 | MS.gene35422:CDS |
| TTCAGAATTCAGCCATGAAA+AGG | 0.472686 | 2.1:+15551340 | None:intergenic |
| AAGACTCAGACTCTTTGATC+TGG | 0.478220 | 2.1:+15551447 | None:intergenic |
| CAATAGCAAGGCATACCAAC+AGG | 0.489567 | 2.1:-15551379 | MS.gene35422:CDS |
| GTCCTCCCTATGCTTGAAAT+GGG | 0.492965 | 2.1:+15551134 | None:intergenic |
| CTCCTCCCATTTCAAGCATA+GGG | 0.493217 | 2.1:-15551139 | MS.gene35422:CDS |
| GGGTGTCAAAGATGTGTTGT+AGG | 0.504528 | 2.1:+15551621 | None:intergenic |
| TAGGCTGTCACAGGTTGCCA+TGG | 0.514804 | 2.1:+15551640 | None:intergenic |
| CCTCCTCCCATTTCAAGCAT+AGG | 0.517066 | 2.1:-15551140 | MS.gene35422:CDS |
| TCGGTATCCTTACCTCTTCG+AGG | 0.517417 | 2.1:+15551060 | None:intergenic |
| ATGGAGAATGTAGGAGGTCA+AGG | 0.523495 | 2.1:-15551175 | MS.gene35422:CDS |
| ATTTCAAGCATAGGGAGGAC+CGG | 0.525710 | 2.1:-15551131 | MS.gene35422:CDS |
| TTCACCAAATATCTCAGTAA+AGG | 0.527789 | 2.1:+15551520 | None:intergenic |
| AGCATGCATCTTTGCACCGA+AGG | 0.535589 | 2.1:-15551317 | MS.gene35422:CDS |
| GAGGACTCTATGGATTTCAC+TGG | 0.537192 | 2.1:+15551545 | None:intergenic |
| CCTATGCTTGAAATGGGAGG+AGG | 0.541240 | 2.1:+15551140 | None:intergenic |
| CTGCGTGCTTATAGAGAGGA+TGG | 0.545087 | 2.1:-15551026 | MS.gene35422:CDS |
| GATTTGTCCTCGAAGAGGTA+AGG | 0.546648 | 2.1:-15551067 | MS.gene35422:CDS |
| ATAAGCACGCAGGACCTCCT+GGG | 0.552052 | 2.1:+15551037 | None:intergenic |
| ACTCTCAAAACCAAGACCTT+CGG | 0.553557 | 2.1:+15551301 | None:intergenic |
| AGAGGTAAGGATACCGACCC+AGG | 0.560235 | 2.1:-15551054 | MS.gene35422:CDS |
| TTTCAATTACACCAATAGCA+AGG | 0.571241 | 2.1:-15551391 | MS.gene35422:CDS |
| ACCAAATATCTCAGTAAAGG+AGG | 0.572346 | 2.1:+15551523 | None:intergenic |
| AGAAGACATGGCAAAAGAAG+AGG | 0.576952 | 2.1:-15550907 | MS.gene35422:CDS |
| TGATCTGGTTGAAGTTTGTG+TGG | 0.577238 | 2.1:+15551462 | None:intergenic |
| ATCATTCTTATGGAGAATGT+AGG | 0.580254 | 2.1:-15551184 | MS.gene35422:CDS |
| TGAGAGTTCAGACGATGTCG+AGG | 0.585948 | 2.1:-15551285 | MS.gene35422:CDS |
| TTTCAAGCATAGGGAGGACC+GGG | 0.586404 | 2.1:-15551130 | MS.gene35422:CDS |
| AAATATCTCAGTAAAGGAGG+AGG | 0.599938 | 2.1:+15551526 | None:intergenic |
| CTATGCTTGAAATGGGAGGA+GGG | 0.601586 | 2.1:+15551141 | None:intergenic |
| TTTCTGGAAGATGAGGATGA+AGG | 0.603701 | 2.1:-15550963 | MS.gene35422:CDS |
| AGCTGAGGAAGGAGAAGACA+TGG | 0.613301 | 2.1:-15550919 | MS.gene35422:CDS |
| TCCAGAAACTCATCATCAGG+AGG | 0.618671 | 2.1:+15550978 | None:intergenic |
| TGGAGAATGTAGGAGGTCAA+GGG | 0.619517 | 2.1:-15551174 | MS.gene35422:CDS |
| GATGTGTTGTAGGCTGTCAC+AGG | 0.621992 | 2.1:+15551631 | None:intergenic |
| CTCCCTATGCTTGAAATGGG+AGG | 0.622171 | 2.1:+15551137 | None:intergenic |
| GATGTCGAGGACTCAAAGAG+TGG | 0.622521 | 2.1:-15551272 | MS.gene35422:CDS |
| ATAGGATGCATAGCTGAGGA+AGG | 0.625542 | 2.1:-15550930 | MS.gene35422:CDS |
| ATTCTTATGGAGAATGTAGG+AGG | 0.629147 | 2.1:-15551181 | MS.gene35422:CDS |
| GCACGCAGGACCTCCTGGGT+CGG | 0.641235 | 2.1:+15551041 | None:intergenic |
| ATAGACCTGAAATAAACCCA+AGG | 0.650033 | 2.1:+15551104 | None:intergenic |
| TGGAAGATTTGTCCTCGAAG+AGG | 0.651915 | 2.1:-15551072 | MS.gene35422:CDS |
| GTGCTTATAGAGAGGATGGA+AGG | 0.652178 | 2.1:-15551022 | MS.gene35422:CDS |
| CCAGAAACTCATCATCAGGA+GGG | 0.654723 | 2.1:+15550979 | None:intergenic |
| GGTCCTGCGTGCTTATAGAG+AGG | 0.655010 | 2.1:-15551030 | MS.gene35422:CDS |
| TGATGAGTTTCTGGAAGATG+AGG | 0.656575 | 2.1:-15550970 | MS.gene35422:CDS |
| CTCCCATTTCAAGCATAGGG+AGG | 0.670101 | 2.1:-15551136 | MS.gene35422:CDS |
| TGATATAGGATGCATAGCTG+AGG | 0.671509 | 2.1:-15550934 | MS.gene35422:CDS |
| CATCCTCTCTATAAGCACGC+AGG | 0.674324 | 2.1:+15551027 | None:intergenic |
| GGTAAGGATACCGACCCAGG+AGG | 0.739295 | 2.1:-15551051 | MS.gene35422:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTTGTTAAATGAAA+GGG | + | chr2.1:15550933-15550952 | None:intergenic | 10.0% |
| !!! | GTTTAATTTTGTTAAATGAA+AGG | + | chr2.1:15550934-15550953 | None:intergenic | 15.0% |
| ATCATTCTTATGGAGAATGT+AGG | - | chr2.1:15551314-15551333 | MS.gene35422:CDS | 30.0% | |
| ATTGAAAAAGAAGCTGAAGA+TGG | + | chr2.1:15551094-15551113 | None:intergenic | 30.0% | |
| TCTTCAAGACATCATTCTTA+TGG | - | chr2.1:15551304-15551323 | MS.gene35422:CDS | 30.0% | |
| TTCACCAAATATCTCAGTAA+AGG | + | chr2.1:15550981-15551000 | None:intergenic | 30.0% | |
| TTCAGGTCTATTAGGAATAA+TGG | - | chr2.1:15551406-15551425 | MS.gene35422:CDS | 30.0% | |
| TTTCAATTACACCAATAGCA+AGG | - | chr2.1:15551107-15551126 | MS.gene35422:CDS | 30.0% | |
| !! | TTGATGATGATTCCTTGAAA+TGG | + | chr2.1:15551006-15551025 | None:intergenic | 30.0% |
| AAATATCTCAGTAAAGGAGG+AGG | + | chr2.1:15550975-15550994 | None:intergenic | 35.0% | |
| ACCAAATATCTCAGTAAAGG+AGG | + | chr2.1:15550978-15550997 | None:intergenic | 35.0% | |
| ATAGACCTGAAATAAACCCA+AGG | + | chr2.1:15551397-15551416 | None:intergenic | 35.0% | |
| ATTCTTATGGAGAATGTAGG+AGG | - | chr2.1:15551317-15551336 | MS.gene35422:CDS | 35.0% | |
| GATGAAGGAGAGAATGATAT+AGG | - | chr2.1:15551550-15551569 | MS.gene35422:CDS | 35.0% | |
| TCCTCCTTTACTGAGATATT+TGG | - | chr2.1:15550974-15550993 | MS.gene35422:CDS | 35.0% | |
| TTCAGAATTCAGCCATGAAA+AGG | + | chr2.1:15551161-15551180 | None:intergenic | 35.0% | |
| ! | ATTTGGTGAACTCCATTTCA+AGG | - | chr2.1:15550991-15551010 | MS.gene35422:CDS | 35.0% |
| ! | GGGTTTATTTCAGGTCTATT+AGG | - | chr2.1:15551398-15551417 | MS.gene35422:CDS | 35.0% |
| !! | TGTTGGATTTTCTGGCAATA+GGG | + | chr2.1:15550900-15550919 | None:intergenic | 35.0% |
| AAGAAGCTGAAGATGGAGTT+TGG | + | chr2.1:15551087-15551106 | None:intergenic | 40.0% | |
| AAGACTCAGACTCTTTGATC+TGG | + | chr2.1:15551054-15551073 | None:intergenic | 40.0% | |
| ACTCTCAAAACCAAGACCTT+CGG | + | chr2.1:15551200-15551219 | None:intergenic | 40.0% | |
| AGAAGACATGGCAAAAGAAG+AGG | - | chr2.1:15551591-15551610 | MS.gene35422:CDS | 40.0% | |
| TCTTCCAGAAACTCATCATC+AGG | + | chr2.1:15551526-15551545 | None:intergenic | 40.0% | |
| TGATATAGGATGCATAGCTG+AGG | - | chr2.1:15551564-15551583 | MS.gene35422:CDS | 40.0% | |
| TGATCTGGTTGAAGTTTGTG+TGG | + | chr2.1:15551039-15551058 | None:intergenic | 40.0% | |
| ! | AAAGCAGTGACACCTTTTCA+TGG | - | chr2.1:15551146-15551165 | MS.gene35422:CDS | 40.0% |
| ! | TGATGAGTTTCTGGAAGATG+AGG | - | chr2.1:15551528-15551547 | MS.gene35422:CDS | 40.0% |
| ! | TTTCTGGAAGATGAGGATGA+AGG | - | chr2.1:15551535-15551554 | MS.gene35422:CDS | 40.0% |
| !! | GTGTTGGATTTTCTGGCAAT+AGG | + | chr2.1:15550901-15550920 | None:intergenic | 40.0% |
| !! | TGAAGCAGTGTTGGATTTTC+TGG | + | chr2.1:15550908-15550927 | None:intergenic | 40.0% |
| AGTAAAGGAGGAGGACTCTA+TGG | + | chr2.1:15550966-15550985 | None:intergenic | 45.0% | |
| ATAGGATGCATAGCTGAGGA+AGG | - | chr2.1:15551568-15551587 | MS.gene35422:CDS | 45.0% | |
| ATGGAGAATGTAGGAGGTCA+AGG | - | chr2.1:15551323-15551342 | MS.gene35422:CDS | 45.0% | |
| ATTTCAAGCATAGGGAGGAC+CGG | - | chr2.1:15551367-15551386 | MS.gene35422:CDS | 45.0% | |
| CAATAGCAAGGCATACCAAC+AGG | - | chr2.1:15551119-15551138 | MS.gene35422:CDS | 45.0% | |
| CCAGAAACTCATCATCAGGA+GGG | + | chr2.1:15551522-15551541 | None:intergenic | 45.0% | |
| CTATGCTTGAAATGGGAGGA+GGG | + | chr2.1:15551360-15551379 | None:intergenic | 45.0% | |
| CTCCTCCCATTTCAAGCATA+GGG | - | chr2.1:15551359-15551378 | MS.gene35422:CDS | 45.0% | |
| GAAAGGGATTGAAGCAGTGT+TGG | + | chr2.1:15550917-15550936 | None:intergenic | 45.0% | |
| GAAATAAACCCAAGGCTTCC+CGG | + | chr2.1:15551389-15551408 | None:intergenic | 45.0% | |
| GAGGACTCTATGGATTTCAC+TGG | + | chr2.1:15550956-15550975 | None:intergenic | 45.0% | |
| GATTTGTCCTCGAAGAGGTA+AGG | - | chr2.1:15551431-15551450 | MS.gene35422:CDS | 45.0% | |
| GGAAGCCTTGGGTTTATTTC+AGG | - | chr2.1:15551389-15551408 | MS.gene35422:CDS | 45.0% | |
| GGGTGTCAAAGATGTGTTGT+AGG | + | chr2.1:15550880-15550899 | None:intergenic | 45.0% | |
| GTCCTCCCTATGCTTGAAAT+GGG | + | chr2.1:15551367-15551386 | None:intergenic | 45.0% | |
| GTGCTTATAGAGAGGATGGA+AGG | - | chr2.1:15551476-15551495 | MS.gene35422:CDS | 45.0% | |
| TCCAGAAACTCATCATCAGG+AGG | + | chr2.1:15551523-15551542 | None:intergenic | 45.0% | |
| TGGAAGATTTGTCCTCGAAG+AGG | - | chr2.1:15551426-15551445 | MS.gene35422:CDS | 45.0% | |
| TGGAGAATGTAGGAGGTCAA+GGG | - | chr2.1:15551324-15551343 | MS.gene35422:CDS | 45.0% | |
| ! | CTGTTGGTATGCCTTGCTAT+TGG | + | chr2.1:15551121-15551140 | None:intergenic | 45.0% |
| AGCATGCATCTTTGCACCGA+AGG | - | chr2.1:15551181-15551200 | MS.gene35422:CDS | 50.0% | |
| AGCTGAGGAAGGAGAAGACA+TGG | - | chr2.1:15551579-15551598 | MS.gene35422:CDS | 50.0% | |
| CATCCTCTCTATAAGCACGC+AGG | + | chr2.1:15551474-15551493 | None:intergenic | 50.0% | |
| CATCTTTGCACCGAAGGTCT+TGG | - | chr2.1:15551187-15551206 | MS.gene35422:CDS | 50.0% | |
| CCTATGCTTGAAATGGGAGG+AGG | + | chr2.1:15551361-15551380 | None:intergenic | 50.0% | |
| CCTCCTCCCATTTCAAGCAT+AGG | - | chr2.1:15551358-15551377 | MS.gene35422:CDS | 50.0% | |
| CTCCCATTTCAAGCATAGGG+AGG | - | chr2.1:15551362-15551381 | MS.gene35422:CDS | 50.0% | |
| CTCCCTATGCTTGAAATGGG+AGG | + | chr2.1:15551364-15551383 | None:intergenic | 50.0% | |
| CTGCGTGCTTATAGAGAGGA+TGG | - | chr2.1:15551472-15551491 | MS.gene35422:CDS | 50.0% | |
| GATGTCGAGGACTCAAAGAG+TGG | - | chr2.1:15551226-15551245 | MS.gene35422:CDS | 50.0% | |
| GATGTGTTGTAGGCTGTCAC+AGG | + | chr2.1:15550870-15550889 | None:intergenic | 50.0% | |
| GGTCCTCCCTATGCTTGAAA+TGG | + | chr2.1:15551368-15551387 | None:intergenic | 50.0% | |
| TCGGTATCCTTACCTCTTCG+AGG | + | chr2.1:15551441-15551460 | None:intergenic | 50.0% | |
| TGAGAGTTCAGACGATGTCG+AGG | - | chr2.1:15551213-15551232 | MS.gene35422:CDS | 50.0% | |
| TTTCAAGCATAGGGAGGACC+GGG | - | chr2.1:15551368-15551387 | MS.gene35422:CDS | 50.0% | |
| ! | CCCTCCTGATGATGAGTTTC+TGG | - | chr2.1:15551519-15551538 | MS.gene35422:CDS | 50.0% |
| !! | GTCACTGCTTTTGTGCCTGT+TGG | + | chr2.1:15551137-15551156 | None:intergenic | 50.0% |
| AGAGGTAAGGATACCGACCC+AGG | - | chr2.1:15551444-15551463 | MS.gene35422:CDS | 55.0% | |
| ATAAGCACGCAGGACCTCCT+GGG | + | chr2.1:15551464-15551483 | None:intergenic | 55.0% | |
| GGTCCTGCGTGCTTATAGAG+AGG | - | chr2.1:15551468-15551487 | MS.gene35422:CDS | 55.0% | |
| TATAAGCACGCAGGACCTCC+TGG | + | chr2.1:15551465-15551484 | None:intergenic | 55.0% | |
| GGTAAGGATACCGACCCAGG+AGG | - | chr2.1:15551447-15551466 | MS.gene35422:CDS | 60.0% | |
| AGGGAGGACCGGGAAGCCTT+GGG | - | chr2.1:15551378-15551397 | MS.gene35422:CDS | 65.0% | |
| TAGGGAGGACCGGGAAGCCT+TGG | - | chr2.1:15551377-15551396 | MS.gene35422:CDS | 65.0% | |
| GCACGCAGGACCTCCTGGGT+CGG | + | chr2.1:15551460-15551479 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 15550860 | 15551660 | 15550860 | ID=MS.gene35422 |
| chr2.1 | mRNA | 15550860 | 15551660 | 15550860 | ID=MS.gene35422.t1;Parent=MS.gene35422 |
| chr2.1 | exon | 15550860 | 15551660 | 15550860 | ID=MS.gene35422.t1.exon1;Parent=MS.gene35422.t1 |
| chr2.1 | CDS | 15550860 | 15551660 | 15550860 | ID=cds.MS.gene35422.t1;Parent=MS.gene35422.t1 |
| Gene Sequence |
| Protein sequence |