AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35951

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35951.t1 MTR_8g467490 95.489 399 13 3 1 398 1 395 0.0 781
MS.gene35951.t1 MTR_5g040420 59.954 432 98 12 1 398 1 391 1.73e-164 467
MS.gene35951.t1 MTR_6g011860 49.148 411 176 10 1 398 1 391 1.20e-124 365
MS.gene35951.t1 MTR_5g090970 62.874 167 61 1 9 174 12 178 1.58e-74 234
MS.gene35951.t1 MTR_2g068880 60.753 186 63 6 12 191 19 200 8.30e-74 233
MS.gene35951.t1 MTR_2g068920 63.314 169 55 4 12 174 18 185 3.18e-72 228
MS.gene35951.t1 MTR_5g090970 62.275 167 61 2 9 174 12 177 3.50e-72 228
MS.gene35951.t1 MTR_2g080010 43.111 225 115 3 1 213 1 224 6.28e-61 201
MS.gene35951.t1 MTR_4g089135 52.273 176 70 2 17 178 17 192 3.16e-60 199
MS.gene35951.t1 MTR_4g134460 51.163 172 72 3 12 183 51 210 6.11e-59 198
MS.gene35951.t1 MTR_7g085220 46.698 212 86 6 17 218 10 204 3.93e-58 193
MS.gene35951.t1 MTR_2157s0010 45.652 230 110 7 17 234 10 236 8.57e-58 190
MS.gene35951.t1 MTR_5g041940 54.321 162 67 3 17 178 5 159 3.07e-57 188
MS.gene35951.t1 MTR_2g093810 54.430 158 67 2 17 174 16 168 4.06e-56 187
MS.gene35951.t1 MTR_4g036030 44.976 209 98 5 17 222 9 203 4.61e-56 188
MS.gene35951.t1 MTR_8g094580 53.165 158 66 3 17 174 9 158 1.15e-55 185
MS.gene35951.t1 MTR_4g081870 55.000 160 65 3 17 176 11 163 2.14e-55 184
MS.gene35951.t1 MTR_3g088110 48.634 183 67 4 17 186 9 177 5.51e-55 183
MS.gene35951.t1 MTR_5g012080 49.133 173 74 3 17 186 9 170 2.53e-54 183
MS.gene35951.t1 MTR_6g012670 39.560 273 132 7 1 258 5 259 1.39e-53 181
MS.gene35951.t1 MTR_7g100990 50.595 168 73 4 13 177 8 168 5.21e-53 179
MS.gene35951.t1 MTR_3g435150 50.000 176 78 3 1 175 1 167 6.03e-53 178
MS.gene35951.t1 MTR_2g079990 49.451 182 80 5 17 198 18 187 7.27e-53 180
MS.gene35951.t1 MTR_4g108760 45.361 194 84 3 17 197 19 203 7.90e-53 180
MS.gene35951.t1 MTR_8g076110 43.367 196 93 5 11 202 2 183 9.87e-53 178
MS.gene35951.t1 MTR_4g101680 47.619 168 72 3 17 181 9 163 2.37e-52 179
MS.gene35951.t1 MTR_5g021710 41.333 225 107 8 9 226 2 208 2.56e-52 178
MS.gene35951.t1 MTR_3g096920 51.266 158 68 3 17 174 9 157 3.32e-52 176
MS.gene35951.t1 MTR_8g059170 51.497 167 71 5 17 183 16 172 8.87e-52 176
MS.gene35951.t1 MTR_2g064090 50.932 161 67 4 17 175 8 158 9.38e-52 177
MS.gene35951.t1 MTR_4g075980 49.143 175 72 4 12 185 12 170 9.92e-52 175
MS.gene35951.t1 MTR_6g032770 45.455 176 88 2 12 186 14 182 1.63e-50 174
MS.gene35951.t1 MTR_2g078700 50.000 160 73 1 17 176 25 177 5.38e-50 173
MS.gene35951.t1 MTR_3g109340 48.588 177 76 3 1 177 12 173 1.70e-49 171
MS.gene35951.t1 MTR_3g109340 48.588 177 77 3 1 177 12 174 1.80e-49 171
MS.gene35951.t1 MTR_2g079990 45.098 204 84 6 17 198 18 215 2.69e-49 171
MS.gene35951.t1 MTR_3g096920 55.474 137 57 2 17 153 9 141 2.88e-49 169
MS.gene35951.t1 MTR_6g084430 46.471 170 78 3 11 180 1 157 3.89e-49 169
MS.gene35951.t1 MTR_6g477900 42.328 189 95 4 17 203 8 184 5.90e-49 166
MS.gene35951.t1 MTR_7g085260 39.506 243 115 6 17 238 19 250 7.62e-49 170
MS.gene35951.t1 MTR_4g035590 50.000 164 63 4 17 176 10 158 1.03e-48 169
MS.gene35951.t1 MTR_3g064580 45.596 193 81 6 17 206 8 179 2.39e-48 174
MS.gene35951.t1 MTR_2g062730 35.688 269 144 8 17 276 12 260 6.70e-48 166
MS.gene35951.t1 MTR_8g024480 46.988 166 77 4 17 176 17 177 8.27e-48 168
MS.gene35951.t1 MTR_3g070030 44.253 174 88 3 12 184 15 180 1.51e-47 166
MS.gene35951.t1 MTR_5g069030 50.307 163 68 4 18 178 28 179 3.49e-47 171
MS.gene35951.t1 MTR_1g096430 46.108 167 74 4 11 174 3 156 8.05e-47 163
MS.gene35951.t1 MTR_5g076850 46.584 161 73 3 17 175 8 157 1.00e-46 169
MS.gene35951.t1 MTR_1g008740 46.552 174 81 4 3 175 2 164 1.21e-46 163
MS.gene35951.t1 MTR_7g005280 45.604 182 85 3 1 182 1 168 1.31e-46 160
MS.gene35951.t1 MTR_5g014300 46.707 167 66 4 17 174 8 160 1.69e-46 162
MS.gene35951.t1 MTR_1g008740 46.552 174 81 4 3 175 16 178 2.23e-46 163
MS.gene35951.t1 MTR_3g096140 45.732 164 76 4 13 174 5 157 3.40e-46 160
MS.gene35951.t1 MTR_1g069805 37.179 234 121 4 17 247 12 222 4.89e-46 159
MS.gene35951.t1 MTR_3g096140 45.732 164 76 4 13 174 5 157 1.53e-45 160
MS.gene35951.t1 MTR_3g093050 47.273 165 74 4 18 180 25 178 1.74e-45 165
MS.gene35951.t1 MTR_3g116070 39.583 240 127 5 9 240 17 246 2.26e-45 160
MS.gene35951.t1 MTR_4g098630 46.784 171 79 4 17 184 8 169 2.60e-45 159
MS.gene35951.t1 MTR_3g093050 47.273 165 74 4 18 180 25 178 3.78e-45 165
MS.gene35951.t1 MTR_7g011130 46.061 165 81 3 18 176 22 184 5.78e-45 159
MS.gene35951.t1 MTR_2g064470 39.256 242 117 8 11 242 7 228 7.17e-45 157
MS.gene35951.t1 MTR_8g063550 43.827 162 78 4 15 174 6 156 7.28e-45 158
MS.gene35951.t1 MTR_8g063550 43.827 162 78 4 15 174 6 156 1.38e-44 160
MS.gene35951.t1 MTR_8g063550 43.827 162 78 4 15 174 6 156 1.52e-44 160
MS.gene35951.t1 MTR_7g011120 45.283 159 85 1 18 176 11 167 2.77e-44 156
MS.gene35951.t1 MTR_1g097300 47.024 168 72 5 13 175 15 170 3.48e-44 161
MS.gene35951.t1 MTR_3g093040 43.529 170 82 5 14 180 106 264 1.44e-43 154
MS.gene35951.t1 MTR_7g097090 42.949 156 76 1 17 172 12 154 3.41e-42 150
MS.gene35951.t1 MTR_1g090723 46.951 164 73 6 17 177 10 162 4.01e-42 156
MS.gene35951.t1 MTR_1g090723 44.311 167 72 5 17 177 10 161 5.19e-42 156
MS.gene35951.t1 MTR_8g093580 41.975 162 81 4 15 174 6 156 5.28e-42 154
MS.gene35951.t1 MTR_1g090723 44.311 167 72 5 17 177 10 161 6.15e-42 155
MS.gene35951.t1 MTR_8g099750 44.516 155 80 2 17 171 16 164 1.94e-41 146
MS.gene35951.t1 MTR_1g090720 42.857 168 81 4 15 176 42 200 3.75e-41 152
MS.gene35951.t1 MTR_0036s0150 40.860 186 93 7 17 199 7 178 6.62e-40 149
MS.gene35951.t1 MTR_2g086880 48.031 127 63 2 15 140 18 142 3.32e-37 141
MS.gene35951.t1 MTR_2g086880 48.031 127 63 2 15 140 18 142 4.68e-37 142
MS.gene35951.t1 MTR_3g098810 42.857 168 89 3 17 182 16 178 6.09e-37 134
MS.gene35951.t1 MTR_8g023840 49.254 134 64 3 18 148 14 146 1.36e-36 137
MS.gene35951.t1 MTR_4g052620 35.023 217 124 6 11 222 1 205 2.88e-36 133
MS.gene35951.t1 MTR_3g096140 42.466 146 71 4 31 174 2 136 8.00e-35 131
MS.gene35951.t1 MTR_7g105170 31.602 231 141 8 15 238 4 224 1.26e-34 129
MS.gene35951.t1 MTR_3g070040 40.000 165 85 4 19 181 12 164 1.84e-34 130
MS.gene35951.t1 MTR_3g098810 49.618 131 62 2 17 145 16 144 2.05e-34 125
MS.gene35951.t1 MTR_2g086690 40.000 165 80 6 17 172 6 160 2.79e-32 122
MS.gene35951.t1 MTR_8g023860 47.244 127 63 3 18 141 15 140 4.43e-32 125
MS.gene35951.t1 MTR_8g094580 50.000 112 48 3 63 174 1 104 6.11e-32 121
MS.gene35951.t1 MTR_8g023900 37.870 169 87 4 18 183 196 349 9.41e-30 120
MS.gene35951.t1 MTR_8g023900 35.542 166 91 4 18 180 15 167 6.85e-29 117
MS.gene35951.t1 MTR_4g094302 37.342 158 88 2 17 174 13 159 1.89e-28 110
MS.gene35951.t1 MTR_8g023930 36.686 169 89 5 18 183 27 180 2.34e-28 116
MS.gene35951.t1 MTR_4g094302 40.476 126 67 1 17 142 13 130 8.43e-27 105
MS.gene35951.t1 MTR_8g023880 33.155 187 86 8 18 186 10 175 1.32e-21 94.0
MS.gene35951.t1 MTR_8g093790 32.738 168 82 6 17 184 12 148 1.68e-19 85.9
MS.gene35951.t1 MTR_7g070140 44.828 87 45 1 68 154 17 100 1.75e-19 84.3
MS.gene35951.t1 MTR_3g096400 31.481 162 96 5 17 173 9 160 2.68e-17 80.5
MS.gene35951.t1 MTR_7g083330 28.177 181 113 6 18 196 21 186 4.88e-16 76.3
MS.gene35951.t1 MTR_7g083370 33.333 126 76 5 18 140 13 133 2.03e-15 73.2
MS.gene35951.t1 MTR_7g083360 31.944 144 90 6 13 152 7 146 6.01e-15 72.4
MS.gene35951.t1 MTR_1g087190 58.333 48 19 1 17 63 7 54 1.52e-13 65.1
MS.gene35951.t1 MTR_7g070150 39.241 79 36 1 108 186 3 69 1.15e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35951.t1 AT1G26870 60.364 275 91 5 1 264 1 268 3.38e-107 322
MS.gene35951.t1 AT5G39820 66.667 204 55 4 2 192 7 210 2.40e-97 294
MS.gene35951.t1 AT2G43000 60.116 173 57 3 9 181 12 172 1.44e-72 228
MS.gene35951.t1 AT3G12910 56.284 183 71 5 1 175 5 186 5.35e-62 202
MS.gene35951.t1 AT2G02450 47.087 206 85 5 14 219 50 231 1.38e-59 198
MS.gene35951.t1 AT2G02450 47.087 206 85 5 14 219 50 231 1.93e-59 199
MS.gene35951.t1 AT3G15510 42.857 224 107 3 19 240 21 225 5.58e-59 196
MS.gene35951.t1 AT1G69490 45.813 203 103 4 17 219 11 206 4.85e-58 191
MS.gene35951.t1 AT3G04070 53.529 170 64 3 17 178 12 174 8.28e-58 192
MS.gene35951.t1 AT3G04070 51.397 179 70 3 17 178 12 190 6.50e-57 191
MS.gene35951.t1 AT5G63790 44.186 215 101 6 3 215 46 243 8.72e-56 186
MS.gene35951.t1 AT5G63790 44.186 215 101 6 3 215 36 233 9.23e-56 186
MS.gene35951.t1 AT1G01720 52.410 166 71 3 17 182 9 166 5.11e-55 183
MS.gene35951.t1 AT4G27410 50.595 168 72 3 17 184 16 172 2.75e-54 182
MS.gene35951.t1 AT2G17040 50.286 175 70 4 12 185 3 161 4.47e-54 181
MS.gene35951.t1 AT1G76420 46.524 187 84 2 2 188 15 185 5.81e-54 182
MS.gene35951.t1 AT5G08790 51.534 163 71 4 13 174 4 159 2.34e-53 179
MS.gene35951.t1 AT5G61430 36.149 296 144 8 1 286 1 261 2.65e-53 180
MS.gene35951.t1 AT1G12260 48.810 168 70 4 17 181 9 163 4.79e-53 181
MS.gene35951.t1 AT4G36160 47.701 174 75 4 17 187 12 172 5.21e-53 181
MS.gene35951.t1 AT4G36160 47.701 174 75 4 17 187 12 172 5.21e-53 181
MS.gene35951.t1 AT1G12260 48.810 168 70 4 17 181 9 163 5.37e-53 180
MS.gene35951.t1 AT4G36160 47.701 174 75 4 17 187 16 176 5.93e-53 181
MS.gene35951.t1 AT1G52880 54.438 169 66 3 19 181 21 184 1.15e-52 178
MS.gene35951.t1 AT5G07680 43.396 212 101 3 17 218 5 207 1.18e-52 178
MS.gene35951.t1 AT5G07680 43.396 212 101 3 17 218 19 221 1.67e-52 178
MS.gene35951.t1 AT5G39610 44.059 202 90 4 17 206 22 212 2.20e-52 176
MS.gene35951.t1 AT2G18060 47.701 174 74 5 17 187 11 170 2.59e-52 179
MS.gene35951.t1 AT2G18060 47.701 174 74 5 17 187 11 170 2.59e-52 179
MS.gene35951.t1 AT3G15500 51.190 168 67 4 17 182 16 170 4.67e-52 176
MS.gene35951.t1 AT1G77450 49.697 165 74 3 17 181 12 167 7.35e-52 174
MS.gene35951.t1 AT2G24430 47.093 172 81 1 9 180 10 171 9.76e-52 176
MS.gene35951.t1 AT2G24430 47.093 172 81 1 9 180 10 171 9.76e-52 176
MS.gene35951.t1 AT1G61110 45.662 219 91 7 17 230 18 213 1.08e-51 176
MS.gene35951.t1 AT1G52890 51.479 169 66 5 17 183 16 170 1.29e-51 175
MS.gene35951.t1 AT1G62700 43.077 195 88 4 17 201 9 190 3.62e-51 176
MS.gene35951.t1 AT1G62700 43.077 195 88 4 17 201 9 190 3.62e-51 176
MS.gene35951.t1 AT4G10350 36.934 287 137 9 17 293 11 263 6.51e-51 174
MS.gene35951.t1 AT3G17730 48.193 166 73 3 17 180 8 162 6.65e-51 171
MS.gene35951.t1 AT5G66300 44.240 217 98 7 17 225 14 215 2.97e-50 171
MS.gene35951.t1 AT5G18270 48.750 160 74 2 17 176 23 174 3.67e-50 172
MS.gene35951.t1 AT3G18400 48.235 170 76 3 11 180 1 158 3.73e-50 171
MS.gene35951.t1 AT3G04060 48.256 172 77 3 17 184 22 185 4.35e-50 172
MS.gene35951.t1 AT5G62380 47.826 161 68 4 17 174 9 156 4.39e-50 172
MS.gene35951.t1 AT5G62380 47.826 161 68 4 17 174 9 156 4.39e-50 172
MS.gene35951.t1 AT4G27410 45.946 185 72 4 17 184 16 189 5.41e-50 171
MS.gene35951.t1 AT1G33280 50.307 163 64 3 17 176 10 158 7.01e-50 171
MS.gene35951.t1 AT1G65910 49.693 163 69 3 15 175 6 157 8.13e-50 178
MS.gene35951.t1 AT3G29035 46.632 193 88 6 6 195 14 194 9.16e-50 171
MS.gene35951.t1 AT3G03200 44.949 198 91 6 17 211 8 190 2.24e-49 174
MS.gene35951.t1 AT5G18270 48.125 160 75 2 17 176 23 174 2.38e-49 170
MS.gene35951.t1 AT1G71930 37.743 257 137 8 11 263 5 242 3.72e-49 169
MS.gene35951.t1 AT1G71930 37.743 257 137 8 11 263 5 242 3.72e-49 169
MS.gene35951.t1 AT4G17980 47.500 160 75 2 17 174 8 160 5.31e-49 167
MS.gene35951.t1 AT4G17980 47.500 160 75 2 17 174 8 160 6.09e-49 167
MS.gene35951.t1 AT3G15170 47.337 169 82 2 12 180 17 178 1.22e-48 167
MS.gene35951.t1 AT5G17260 46.199 171 80 4 17 185 8 168 1.50e-48 171
MS.gene35951.t1 AT5G53950 45.930 172 86 2 13 184 15 179 1.85e-48 169
MS.gene35951.t1 AT3G61910 46.707 167 80 4 17 176 13 177 4.49e-48 167
MS.gene35951.t1 AT2G46770 46.108 167 81 3 17 176 18 182 1.49e-47 166
MS.gene35951.t1 AT3G10500 46.667 165 75 4 15 177 9 162 3.48e-46 166
MS.gene35951.t1 AT1G32770 45.122 164 84 3 17 176 18 179 1.30e-45 161
MS.gene35951.t1 AT1G33060 46.951 164 74 3 13 174 22 174 1.35e-45 166
MS.gene35951.t1 AT1G33060 46.951 164 74 3 13 174 22 174 1.41e-45 166
MS.gene35951.t1 AT4G35580 50.314 159 66 4 18 174 12 159 1.51e-45 164
MS.gene35951.t1 AT4G35580 50.314 159 66 4 18 174 12 159 1.59e-45 164
MS.gene35951.t1 AT1G54330 46.707 167 73 3 17 181 8 160 1.63e-45 159
MS.gene35951.t1 AT4G35580 50.314 159 66 4 18 174 12 159 1.65e-45 164
MS.gene35951.t1 AT5G13180 49.068 161 69 2 17 177 16 163 2.29e-45 157
MS.gene35951.t1 AT1G79580 46.626 163 71 4 17 176 19 168 2.35e-45 160
MS.gene35951.t1 AT1G79580 46.626 163 71 4 17 176 19 168 2.35e-45 160
MS.gene35951.t1 AT1G79580 46.626 163 71 4 17 176 19 168 2.35e-45 160
MS.gene35951.t1 AT1G79580 46.626 163 71 4 17 176 19 168 2.35e-45 160
MS.gene35951.t1 AT1G79580 46.626 163 71 4 17 176 19 168 2.35e-45 160
MS.gene35951.t1 AT3G12977 43.258 178 91 3 2 179 5 172 4.15e-45 157
MS.gene35951.t1 AT1G32510 38.596 228 119 6 17 233 8 225 4.96e-45 157
MS.gene35951.t1 AT5G46590 54.688 128 55 2 17 142 8 134 5.23e-45 157
MS.gene35951.t1 AT1G34180 45.087 173 82 3 7 177 8 169 7.16e-45 161
MS.gene35951.t1 AT1G56010 45.556 180 77 5 2 174 6 171 7.49e-45 158
MS.gene35951.t1 AT5G46590 54.688 128 55 2 17 142 8 134 8.52e-45 157
MS.gene35951.t1 AT3G10490 44.512 164 79 4 15 176 27 180 2.22e-44 154
MS.gene35951.t1 AT1G34190 44.828 174 81 4 7 177 8 169 3.25e-44 161
MS.gene35951.t1 AT1G34180 45.087 173 82 3 7 177 8 169 4.28e-44 161
MS.gene35951.t1 AT5G04410 45.055 182 83 7 15 193 9 176 9.41e-44 160
MS.gene35951.t1 AT3G10480 44.578 166 76 4 15 176 27 180 1.31e-43 157
MS.gene35951.t1 AT3G10480 44.048 168 73 4 15 176 27 179 1.99e-43 157
MS.gene35951.t1 AT3G10490 44.512 164 79 4 15 176 27 180 4.81e-43 156
MS.gene35951.t1 AT5G24590 46.199 171 79 4 9 176 6 166 7.97e-43 155
MS.gene35951.t1 AT1G34180 41.622 185 83 3 7 177 8 181 1.90e-42 155
MS.gene35951.t1 AT1G34180 41.622 185 83 3 7 177 8 181 8.14e-42 155
MS.gene35951.t1 AT5G09330 41.975 162 81 4 15 174 6 156 3.32e-41 152
MS.gene35951.t1 AT5G09330 41.975 162 81 4 15 174 6 156 3.32e-41 152
MS.gene35951.t1 AT5G09330 41.975 162 81 4 15 174 6 156 3.32e-41 152
MS.gene35951.t1 AT5G09330 41.975 162 81 4 15 174 6 156 3.32e-41 152
MS.gene35951.t1 AT5G09330 41.975 162 81 4 15 174 6 156 3.32e-41 152
MS.gene35951.t1 AT3G49530 35.211 213 115 4 18 217 16 218 9.62e-41 149
MS.gene35951.t1 AT5G64060 33.209 268 151 9 15 273 6 254 1.14e-40 147
MS.gene35951.t1 AT4G28530 41.379 174 73 3 17 174 12 172 2.26e-40 147
MS.gene35951.t1 AT3G49530 35.211 213 115 4 18 217 16 218 4.00e-40 149
MS.gene35951.t1 AT2G33480 41.899 179 90 4 1 179 1 165 9.64e-40 143
MS.gene35951.t1 AT5G22290 39.535 172 83 4 15 182 21 175 4.24e-39 143
MS.gene35951.t1 AT2G33480 41.341 179 89 4 1 179 1 163 1.96e-38 139
MS.gene35951.t1 AT3G10480 37.563 197 78 4 15 176 27 213 5.44e-38 144
MS.gene35951.t1 AT3G44290 46.825 126 64 2 16 140 15 138 1.07e-37 136
MS.gene35951.t1 AT2G27300 44.531 128 68 2 14 140 13 138 2.39e-37 138
MS.gene35951.t1 AT3G44290 46.825 126 64 2 16 140 15 138 4.35e-37 137
MS.gene35951.t1 AT5G04395 39.623 159 80 3 12 156 25 181 6.53e-35 127
MS.gene35951.t1 AT5G61430 33.333 234 110 7 63 286 1 198 1.64e-34 129
MS.gene35951.t1 AT2G43000 58.095 105 32 3 77 181 2 94 4.47e-33 123
MS.gene35951.t1 AT1G32870 50.769 130 58 3 15 142 10 135 4.88e-33 130
MS.gene35951.t1 AT1G32870 50.769 130 58 3 15 142 10 135 5.32e-33 130
MS.gene35951.t1 AT1G32870 50.769 130 58 3 15 142 46 171 9.93e-33 129
MS.gene35951.t1 AT5G22380 35.052 194 105 8 18 204 8 187 2.06e-30 117
MS.gene35951.t1 AT4G10350 33.473 239 118 8 62 293 12 216 3.57e-30 118
MS.gene35951.t1 AT5G64530 39.264 163 82 3 17 174 5 155 5.53e-30 114
MS.gene35951.t1 AT3G44350 35.429 175 95 5 11 178 1 164 2.09e-29 114
MS.gene35951.t1 AT3G12977 45.833 120 55 3 60 179 10 119 4.24e-29 113
MS.gene35951.t1 AT1G56010 49.138 116 43 3 63 174 1 104 6.58e-29 114
MS.gene35951.t1 AT5G64530 43.307 127 60 2 17 143 5 119 1.04e-28 110
MS.gene35951.t1 AT4G01550 43.284 134 72 3 16 145 5 138 2.14e-28 116
MS.gene35951.t1 AT3G44350 38.000 150 83 4 11 153 1 147 6.34e-28 108
MS.gene35951.t1 AT4G01520 41.353 133 73 4 18 145 7 139 9.27e-25 103
MS.gene35951.t1 AT4G01540 41.481 135 74 4 16 145 5 139 1.86e-24 104
MS.gene35951.t1 AT4G01540 40.411 146 79 5 16 156 5 147 2.76e-24 103
MS.gene35951.t1 AT4G01540 41.481 135 74 4 16 145 5 139 3.46e-24 104
MS.gene35951.t1 AT4G01540 41.481 135 74 4 16 145 5 139 3.65e-24 103
MS.gene35951.t1 AT1G02250 34.673 199 113 8 18 211 6 192 4.31e-23 99.8
MS.gene35951.t1 AT4G28530 40.476 126 59 2 17 126 12 137 3.03e-22 96.7
MS.gene35951.t1 AT1G02230 38.806 134 74 5 18 146 6 136 9.79e-22 95.9
MS.gene35951.t1 AT3G04420 38.583 127 72 3 18 140 6 130 5.82e-21 92.4
MS.gene35951.t1 AT2G33480 42.056 107 51 3 68 174 8 103 6.44e-21 90.5
MS.gene35951.t1 AT2G18060 47.368 95 36 4 93 187 2 82 1.07e-20 91.7
MS.gene35951.t1 AT3G04420 38.583 127 72 3 18 140 6 130 2.10e-20 92.0
MS.gene35951.t1 AT1G01010 28.462 260 157 8 18 265 6 248 3.69e-19 89.4
MS.gene35951.t1 AT1G02220 37.795 127 70 4 18 140 6 127 8.95e-17 81.6
MS.gene35951.t1 AT5G50820 36.641 131 71 5 17 144 19 140 8.65e-16 75.9
MS.gene35951.t1 AT3G04430 36.842 133 70 5 21 141 6 136 3.09e-15 74.3
MS.gene35951.t1 AT5G14000 31.579 133 85 3 18 148 18 146 1.27e-14 71.6
MS.gene35951.t1 AT5G14000 27.108 166 103 4 18 181 18 167 1.56e-14 72.4
MS.gene35951.t1 AT3G56530 30.189 159 95 5 17 172 54 199 2.26e-14 73.9
MS.gene35951.t1 AT3G10490 38.202 89 45 3 88 176 2 80 7.19e-14 72.8
MS.gene35951.t1 AT3G10490 38.202 89 45 3 88 176 2 80 7.19e-14 72.8
MS.gene35951.t1 AT5G22290 36.957 92 38 3 94 182 2 76 4.13e-12 66.2

Find 95 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATCAATGGATCAATAAT+TGG 0.177383 8.2:-41781532 None:intergenic
TGAAATTGGTAACCGGTATA+AGG 0.232151 8.2:-41781560 None:intergenic
TTAGGAATGTTAGCCATTAA+TGG 0.250578 8.2:-41781751 None:intergenic
GTCTTGTCTACATATTTCTT+TGG 0.251750 8.2:-41780138 None:intergenic
CCAGCTCTTGTTACCCTATT+AGG 0.256540 8.2:-41779943 None:intergenic
CTTGAAGAGGTTATGCTTCC+AGG 0.267006 8.2:+41779072 MS.gene35951:CDS
AGATCTTGATCATTTGAAAT+TGG 0.267969 8.2:-41781574 None:intergenic
TCATGTTTGAGGAACAAAAT+TGG 0.269676 8.2:-41781378 None:intergenic
CAATAATGAGTATCCATTAA+TGG 0.279268 8.2:+41781738 MS.gene35951:CDS
CATTCAACTTGTAGGAATCT+TGG 0.294434 8.2:+41781233 MS.gene35951:intron
ATTATAAGATGGAACATCTA+AGG 0.299587 8.2:-41781506 None:intergenic
TTCCTGTACTTTCTGTCTCT+TGG 0.313082 8.2:-41779910 None:intergenic
GGAACAGTGCAAGACCTAAT+AGG 0.314506 8.2:+41779929 MS.gene35951:CDS
GGGTAACAAGAGCTGGGTTT+TGG 0.314918 8.2:+41779950 MS.gene35951:CDS
AGGTTATGCTTCCAGGGTTT+AGG 0.326370 8.2:+41779079 MS.gene35951:CDS
GGAAGTCATCAAGTCTTGTT+TGG 0.332787 8.2:+41781869 MS.gene35951:CDS
TTCAGTGTGCCTCTCAATAT+TGG 0.343215 8.2:+41781838 MS.gene35951:CDS
ACACGAGGCACGTTCGCATT+AGG 0.344052 8.2:-41781769 None:intergenic
CTTTGTTATCATCATGTTTG+AGG 0.377564 8.2:-41781389 None:intergenic
CCAACTGATGAAGAACTTGT+TGG 0.382953 8.2:+41779108 MS.gene35951:CDS
GAACCCTCTGAGGAATAAAT+AGG 0.385421 8.2:-41779994 None:intergenic
GAAATTGGTAACCGGTATAA+GGG 0.389296 8.2:-41781559 None:intergenic
TGTATAGAGTTGGCAAGTAC+AGG 0.404014 8.2:+41779862 MS.gene35951:intron
TCAGAGGGTTCTAAGTGTAT+TGG 0.407108 8.2:+41780006 MS.gene35951:CDS
AAGGGGTTAAGTGTTGTGTT+AGG 0.408400 8.2:-41781462 None:intergenic
CAAAGTGTAGTACTACTAGA+AGG 0.410066 8.2:-41781481 None:intergenic
ATGGATACTCATTATTGTAA+TGG 0.423638 8.2:-41781732 None:intergenic
TACTACCAAGTGTTATACTT+AGG 0.432517 8.2:+41781933 MS.gene35951:CDS
GATCATTTGAAATTGGTAAC+CGG 0.434751 8.2:-41781567 None:intergenic
ACTACCAAGTGTTATACTTA+GGG 0.437461 8.2:+41781934 MS.gene35951:CDS
TCTACCTTTGTAGAAAACTA+AGG 0.437881 8.2:-41780040 None:intergenic
GAACAGTGCAAGACCTAATA+GGG 0.447391 8.2:+41779930 MS.gene35951:CDS
ATAATTGGATTATTATAAGA+TGG 0.450751 8.2:-41781517 None:intergenic
ATTCAACTTGTAGGAATCTT+GGG 0.452939 8.2:+41781234 MS.gene35951:intron
ATCTTGTAACAAAACTTCAA+TGG 0.456838 8.2:+41781639 MS.gene35951:CDS
GAAGTCATCAAGTCTTGTTT+GGG 0.460153 8.2:+41781870 MS.gene35951:CDS
TTGGATACAGTTCGACCCAT+TGG 0.460883 8.2:+41781808 MS.gene35951:CDS
CCTAATAGGGTAACAAGAGC+TGG 0.463143 8.2:+41779943 MS.gene35951:CDS
TATAAGGGTTTGTAAATCAA+TGG 0.465297 8.2:-41781544 None:intergenic
ATATGTAGACAAGACCATTC+CGG 0.469723 8.2:+41780146 MS.gene35951:CDS
CCAAAGGAGTCAAAACTGAT+TGG 0.471412 8.2:+41780067 MS.gene35951:CDS
ATATTTATAAATTTGATCCA+TGG 0.478110 8.2:+41779193 MS.gene35951:CDS
AAAGAGCTCTCTCTCACTCA+TGG 0.486372 8.2:+41781296 MS.gene35951:CDS
TATTTATAAATTTGATCCAT+GGG 0.487821 8.2:+41779194 MS.gene35951:CDS
CCAACAAGTTCTTCATCAGT+TGG 0.490455 8.2:-41779108 None:intergenic
ATCATTTGTTAGAACATTGG+AGG 0.492381 8.2:-41781344 None:intergenic
TAGGATATGGAAGAGAGAAA+TGG 0.494544 8.2:+41779036 None:intergenic
ATATTGAGAGGCACACTGAA+TGG 0.495510 8.2:-41781835 None:intergenic
TGCATCATTTGTTAGAACAT+TGG 0.496772 8.2:-41781347 None:intergenic
GAGGTTGCTGTTTCAAGTAA+AGG 0.497022 8.2:-41781325 None:intergenic
TTTACTTACATTGGCCGGAA+TGG 0.497789 8.2:-41780160 None:intergenic
TGATTTACAAACCCTTATAC+CGG 0.505584 8.2:+41781548 MS.gene35951:CDS
TATTGAGAGGCACACTGAAT+GGG 0.507464 8.2:-41781834 None:intergenic
CTAGAGTGACTTGCAAAGCT+AGG 0.507948 8.2:-41781415 None:intergenic
GTCTTACTTGGTAGATCCCA+TGG 0.514805 8.2:-41779210 None:intergenic
AGGAATCTTGGGCAATATGC+AGG 0.518840 8.2:+41781245 MS.gene35951:intron
AGCTCTTTGAGCTGTAGCAT+TGG 0.520084 8.2:-41781281 None:intergenic
TTGAAGAGGTTATGCTTCCA+GGG 0.523265 8.2:+41779073 MS.gene35951:CDS
TGTTGATGATCAACAAGAGT+TGG 0.526593 8.2:+41781789 MS.gene35951:CDS
AGTGTTGTGTTAGGTTATTG+TGG 0.533214 8.2:-41781453 None:intergenic
TTGAGGAACAAAATTGGTTG+TGG 0.548581 8.2:-41781372 None:intergenic
GATGATGAATCTATGAGAGA+AGG 0.549029 8.2:-41780111 None:intergenic
AGACCTATTTATTCCTCAGA+GGG 0.557263 8.2:+41779991 MS.gene35951:CDS
CAAGATCTTAACCTTAGCAC+TGG 0.557408 8.2:+41781589 MS.gene35951:CDS
ACACTGAATGGGAATCCAAT+GGG 0.562023 8.2:-41781823 None:intergenic
GTATAGAGTTGGCAAGTACA+GGG 0.573043 8.2:+41779863 MS.gene35951:intron
AAGAGCTCTCTCTCACTCAT+GGG 0.573676 8.2:+41781297 MS.gene35951:CDS
TTATAAGATGGAACATCTAA+GGG 0.574187 8.2:-41781505 None:intergenic
TTGTTACAAGATGTTTCAAG+AGG 0.576354 8.2:-41781628 None:intergenic
AAAGTGTAGTACTACTAGAA+GGG 0.579468 8.2:-41781480 None:intergenic
GGGTTCATCAGAAGTACAAG+AGG 0.581707 8.2:-41781899 None:intergenic
CACACTGAATGGGAATCCAA+TGG 0.582826 8.2:-41781824 None:intergenic
GTTGCTGTTTCAAGTAAAGG+TGG 0.589154 8.2:-41781322 None:intergenic
CAAGTACAGGGGAGAAAGAG+TGG 0.591955 8.2:+41779875 MS.gene35951:CDS
GTAACAACTTCAAACTACAT+TGG 0.595345 8.2:+41781697 MS.gene35951:CDS
CTAATAGGGTAACAAGAGCT+GGG 0.601926 8.2:+41779944 MS.gene35951:CDS
TTGCTGTTTCAAGTAAAGGT+GGG 0.604679 8.2:-41781321 None:intergenic
CAGACCTATTTATTCCTCAG+AGG 0.608250 8.2:+41779990 MS.gene35951:CDS
CTCTCAATATTGGTGATGCA+TGG 0.610941 8.2:+41781848 MS.gene35951:CDS
AAGTGTAGTACTACTAGAAG+GGG 0.613840 8.2:-41781479 None:intergenic
GTCCAAGAGACAGAAAGTAC+AGG 0.615144 8.2:+41779908 MS.gene35951:CDS
AGAATACTAAGCCAGTGCTA+AGG 0.618095 8.2:-41781600 None:intergenic
GTTGGATGAAACCTAAACCC+TGG 0.628808 8.2:-41779090 None:intergenic
CATGCATCACCAATATTGAG+AGG 0.634336 8.2:-41781847 None:intergenic
AGATGACATACCTAATAGCA+AGG 0.639338 8.2:-41781671 None:intergenic
TTGATGAGCTCAATAGCAAG+AGG 0.641698 8.2:-41779162 None:intergenic
TACTTGTGAGAAACTTGAAG+AGG 0.650571 8.2:+41779059 MS.gene35951:CDS
CTTGGTAGTAGAATAACTAG+AGG 0.660558 8.2:-41781920 None:intergenic
TACAAAGGTAGAGCTGCCAA+AGG 0.667663 8.2:+41780051 MS.gene35951:CDS
TAAACCCTAAGTATAACACT+TGG 0.675221 8.2:-41781938 None:intergenic
TGATGAGCTCAATAGCAAGA+GGG 0.682356 8.2:-41779161 None:intergenic
TATAGAGTTGGCAAGTACAG+GGG 0.692122 8.2:+41779864 MS.gene35951:intron
TTGGTAGTAGAATAACTAGA+GGG 0.705649 8.2:-41781919 None:intergenic
AATACACTTAGAACCCTCTG+AGG 0.742862 8.2:-41780004 None:intergenic
TCTTGTTGATCATCAACACG+AGG 0.747637 8.2:-41781784 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - chr8.2:41780305-41780286 None:intergenic 0.0%
!! TATATATATATATATATATA+GGG - chr8.2:41780306-41780287 None:intergenic 0.0%
!! ATAATTGGATTATTATAAGA+TGG - chr8.2:41781520-41781539 None:intergenic 15.0%
!! ATATTTATAAATTTGATCCA+TGG + chr8.2:41779193-41779212 MS.gene35951:CDS 15.0%
!! TATTTATAAATTTGATCCAT+GGG + chr8.2:41779194-41779213 MS.gene35951:CDS 15.0%
!! TGTTTATAATTGAAAAACAT+GGG + chr8.2:41780530-41780549 MS.gene35951:intron 15.0%
!! TTCTAACTAAATATAGATTT+GGG - chr8.2:41780194-41780213 None:intergenic 15.0%
!! TTGTTTATAATTGAAAAACA+TGG + chr8.2:41780529-41780548 MS.gene35951:intron 15.0%
!! AAAGTTTAATAGAGACAAAA+GGG - chr8.2:41780466-41780485 None:intergenic 20.0%
!! ATGAGTAATTAGTAAAGTTA+TGG + chr8.2:41780802-41780821 MS.gene35951:intron 20.0%
!! ATTAGTAAAGTTATGGTATT+TGG + chr8.2:41780809-41780828 MS.gene35951:intron 20.0%
!! GTGTGTAAATAATATATGTT+GGG + chr8.2:41780746-41780765 MS.gene35951:intron 20.0%
!! GTTCTAACTAAATATAGATT+TGG - chr8.2:41780195-41780214 None:intergenic 20.0%
!! TAAAAAGTAAAGTGATAAAG+AGG - chr8.2:41779319-41779338 None:intergenic 20.0%
!! TAAAGTTTAATAGAGACAAA+AGG - chr8.2:41780467-41780486 None:intergenic 20.0%
!! TAAATCAATGGATCAATAAT+TGG - chr8.2:41781535-41781554 None:intergenic 20.0%
!! TATATTTAGTTAGAACTTGT+TGG + chr8.2:41780199-41780218 MS.gene35951:intron 20.0%
!! TGTGTAAATAATATATGTTG+GGG + chr8.2:41780747-41780766 MS.gene35951:intron 20.0%
!! TGTGTGTAAATAATATATGT+TGG + chr8.2:41780745-41780764 MS.gene35951:intron 20.0%
!!! CTTTTTTCCTCTTATTTTAA+GGG - chr8.2:41780922-41780941 None:intergenic 20.0%
!!! GAAGTAAATTTTACTTACAT+TGG - chr8.2:41780172-41780191 None:intergenic 20.0%
!!! TCTTTTTTCCTCTTATTTTA+AGG - chr8.2:41780923-41780942 None:intergenic 20.0%
! ATCTTGTAACAAAACTTCAA+TGG + chr8.2:41781639-41781658 MS.gene35951:CDS 25.0%
! ATGGATACTCATTATTGTAA+TGG - chr8.2:41781735-41781754 None:intergenic 25.0%
! ATTAAATGCATTCAACTTGT+AGG + chr8.2:41781225-41781244 MS.gene35951:intron 25.0%
! ATTATAAGATGGAACATCTA+AGG - chr8.2:41781509-41781528 None:intergenic 25.0%
! CAATAATGAGTATCCATTAA+TGG + chr8.2:41781738-41781757 MS.gene35951:CDS 25.0%
! CATGATATACTATAAACCAT+TGG - chr8.2:41780785-41780804 None:intergenic 25.0%
! GTATGTATGTATGTATGTAT+GGG + chr8.2:41780344-41780363 MS.gene35951:intron 25.0%
! GTGTAAATAATATATGTTGG+GGG + chr8.2:41780748-41780767 MS.gene35951:intron 25.0%
! TATAAGGGTTTGTAAATCAA+TGG - chr8.2:41781547-41781566 None:intergenic 25.0%
! TATATGTAAGTTACACATCT+AGG - chr8.2:41779385-41779404 None:intergenic 25.0%
! TATGTATGTATGTATGTATG+GGG + chr8.2:41780345-41780364 MS.gene35951:intron 25.0%
! TGTATGTATGTATGTATGTA+TGG + chr8.2:41780343-41780362 MS.gene35951:intron 25.0%
! TTATAAGATGGAACATCTAA+GGG - chr8.2:41781508-41781527 None:intergenic 25.0%
! TTTGATACATCTTGTTAGAA+TGG + chr8.2:41780227-41780246 MS.gene35951:intron 25.0%
!! AAAATGACTCAATTGTTTTC+TGG + chr8.2:41781106-41781125 MS.gene35951:intron 25.0%
!! AGAAAACAATTGAGTCATTT+TGG - chr8.2:41781107-41781126 None:intergenic 25.0%
!! AGATCTTGATCATTTGAAAT+TGG - chr8.2:41781577-41781596 None:intergenic 25.0%
!! GTTAAGACTTTTTGATATCT+TGG + chr8.2:41779801-41779820 MS.gene35951:intron 25.0%
!! TAAATTTTACTTACATTGGC+CGG - chr8.2:41780168-41780187 None:intergenic 25.0%
!! TGATATTTTGTGTATAGAGT+TGG + chr8.2:41779852-41779871 MS.gene35951:intron 25.0%
!!! AAATCCTTAGTTTTCTACAA+AGG + chr8.2:41780036-41780055 MS.gene35951:CDS 25.0%
!!! TGTTTTAGTAAAGTACAAGT+AGG - chr8.2:41780443-41780462 None:intergenic 25.0%
!!! TGTTTTGGTAAATAACTAGA+AGG + chr8.2:41780553-41780572 MS.gene35951:intron 25.0%
AAAGTGTAGTACTACTAGAA+GGG - chr8.2:41781483-41781502 None:intergenic 30.0%
ACAATTTCTGACATGTACAT+AGG + chr8.2:41779487-41779506 MS.gene35951:intron 30.0%
ATTCAACTTGTAGGAATCTT+GGG + chr8.2:41781234-41781253 MS.gene35951:intron 30.0%
CAAAGTGATAAACACATCTA+GGG - chr8.2:41779266-41779285 None:intergenic 30.0%
CATTTGACAAATAATCGAGT+AGG + chr8.2:41780717-41780736 MS.gene35951:intron 30.0%
GATATACTATAAACCATTGG+AGG - chr8.2:41780782-41780801 None:intergenic 30.0%
GTAACAACTTCAAACTACAT+TGG + chr8.2:41781697-41781716 MS.gene35951:CDS 30.0%
GTCTTGTCTACATATTTCTT+TGG - chr8.2:41780141-41780160 None:intergenic 30.0%
GTTATGGTATTTGGATTATC+TGG + chr8.2:41780818-41780837 MS.gene35951:intron 30.0%
TAACCTAAAATGCACTTAGT+CGG + chr8.2:41780843-41780862 MS.gene35951:intron 30.0%
TCAAAGTGATAAACACATCT+AGG - chr8.2:41779267-41779286 None:intergenic 30.0%
TCATGTTTGAGGAACAAAAT+TGG - chr8.2:41781381-41781400 None:intergenic 30.0%
TCTACCTTTGTAGAAAACTA+AGG - chr8.2:41780043-41780062 None:intergenic 30.0%
TGATTTACAAACCCTTATAC+CGG + chr8.2:41781548-41781567 MS.gene35951:CDS 30.0%
TTAGGAATGTTAGCCATTAA+TGG - chr8.2:41781754-41781773 None:intergenic 30.0%
TTATCCAAACATCGTACTAT+AGG + chr8.2:41779769-41779788 MS.gene35951:intron 30.0%
TTGTTACAAGATGTTTCAAG+AGG - chr8.2:41781631-41781650 None:intergenic 30.0%
! ATCATTTGTTAGAACATTGG+AGG - chr8.2:41781347-41781366 None:intergenic 30.0%
! ATTGAAAAACATGGGTGTTT+TGG + chr8.2:41780538-41780557 MS.gene35951:intron 30.0%
! CTTTGTTATCATCATGTTTG+AGG - chr8.2:41781392-41781411 None:intergenic 30.0%
! GATCATTTGAAATTGGTAAC+CGG - chr8.2:41781570-41781589 None:intergenic 30.0%
! TGCATCATTTGTTAGAACAT+TGG - chr8.2:41781350-41781369 None:intergenic 30.0%
! TTGGTAGTAGAATAACTAGA+GGG - chr8.2:41781922-41781941 None:intergenic 30.0%
!! ACAATTGAGTCATTTTGGAT+CGG - chr8.2:41781102-41781121 None:intergenic 30.0%
!!! GATTTTTCTTCCTTGCTATT+AGG + chr8.2:41781661-41781680 MS.gene35951:CDS 30.0%
!!! GTTGCTGAATTTTTTTCTTC+AGG - chr8.2:41779140-41779159 None:intergenic 30.0%
!!! TTCATTTTGAAGTGTTTGAC+TGG + chr8.2:41781197-41781216 MS.gene35951:intron 30.0%
AAGTGTAGTACTACTAGAAG+GGG - chr8.2:41781482-41781501 None:intergenic 35.0%
AATATAAGGTTCGCTTGATG+CGG - chr8.2:41779357-41779376 None:intergenic 35.0%
ACATCTAGGTAGGGAATATA+AGG - chr8.2:41779371-41779390 None:intergenic 35.0%
ACTACCTATAGTACGATGTT+TGG - chr8.2:41779776-41779795 None:intergenic 35.0%
AGACCTATTTATTCCTCAGA+GGG + chr8.2:41779991-41780010 MS.gene35951:CDS 35.0%
AGATGACATACCTAATAGCA+AGG - chr8.2:41781674-41781693 None:intergenic 35.0%
AGTGTTGTGTTAGGTTATTG+TGG - chr8.2:41781456-41781475 None:intergenic 35.0%
ATATGTAGACAAGACCATTC+CGG + chr8.2:41780146-41780165 MS.gene35951:CDS 35.0%
CAAAGTGTAGTACTACTAGA+AGG - chr8.2:41781484-41781503 None:intergenic 35.0%
CATTCAACTTGTAGGAATCT+TGG + chr8.2:41781233-41781252 MS.gene35951:intron 35.0%
GATGATGAATCTATGAGAGA+AGG - chr8.2:41780114-41780133 None:intergenic 35.0%
GCACTATTATGAGTCTTACT+TGG - chr8.2:41779225-41779244 None:intergenic 35.0%
GTAAGTTACACATCTAGGTA+GGG - chr8.2:41779380-41779399 None:intergenic 35.0%
GTCTACACCCTTAAAATAAG+AGG + chr8.2:41780912-41780931 MS.gene35951:intron 35.0%
GTGATAAAGAGGTCAAATAC+TGG - chr8.2:41779308-41779327 None:intergenic 35.0%
TACTTGTGAGAAACTTGAAG+AGG + chr8.2:41779059-41779078 MS.gene35951:CDS 35.0%
TGTAAGTTACACATCTAGGT+AGG - chr8.2:41779381-41779400 None:intergenic 35.0%
TTGAGGAACAAAATTGGTTG+TGG - chr8.2:41781375-41781394 None:intergenic 35.0%
! AATCCGACTAAGTGCATTTT+AGG - chr8.2:41780849-41780868 None:intergenic 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG + chr8.2:41780588-41780607 MS.gene35951:intron 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG - chr8.2:41780607-41780588 None:intergenic 35.0%
! CTTGGTAGTAGAATAACTAG+AGG - chr8.2:41781923-41781942 None:intergenic 35.0%
! GAAATTGGTAACCGGTATAA+GGG - chr8.2:41781562-41781581 None:intergenic 35.0%
! TGAAATTGGTAACCGGTATA+AGG - chr8.2:41781563-41781582 None:intergenic 35.0%
!! GAAGTCATCAAGTCTTGTTT+GGG + chr8.2:41781870-41781889 MS.gene35951:CDS 35.0%
!! TGTTGATGATCAACAAGAGT+TGG + chr8.2:41781789-41781808 MS.gene35951:CDS 35.0%
!! TTGCTGTTTCAAGTAAAGGT+GGG - chr8.2:41781324-41781343 None:intergenic 35.0%
AATACACTTAGAACCCTCTG+AGG - chr8.2:41780007-41780026 None:intergenic 40.0%
ACACTGAATGGGAATCCAAT+GGG - chr8.2:41781826-41781845 None:intergenic 40.0%
AGAATACTAAGCCAGTGCTA+AGG - chr8.2:41781603-41781622 None:intergenic 40.0%
CAAGATCTTAACCTTAGCAC+TGG + chr8.2:41781589-41781608 MS.gene35951:CDS 40.0%
CAGACCTATTTATTCCTCAG+AGG + chr8.2:41779990-41780009 MS.gene35951:CDS 40.0%
CATGCATCACCAATATTGAG+AGG - chr8.2:41781850-41781869 None:intergenic 40.0%
CCAAAGGAGTCAAAACTGAT+TGG + chr8.2:41780067-41780086 MS.gene35951:CDS 40.0%
CCAACAAGTTCTTCATCAGT+TGG - chr8.2:41779111-41779130 None:intergenic 40.0%
CCAACTGATGAAGAACTTGT+TGG + chr8.2:41779108-41779127 MS.gene35951:CDS 40.0%
CTAATAGGGTAACAAGAGCT+GGG + chr8.2:41779944-41779963 MS.gene35951:CDS 40.0%
GAACAGTGCAAGACCTAATA+GGG + chr8.2:41779930-41779949 MS.gene35951:CDS 40.0%
GTATAGAGTTGGCAAGTACA+GGG + chr8.2:41779863-41779882 MS.gene35951:intron 40.0%
TATAGAGTTGGCAAGTACAG+GGG + chr8.2:41779864-41779883 MS.gene35951:intron 40.0%
TCTTGTTGATCATCAACACG+AGG - chr8.2:41781787-41781806 None:intergenic 40.0%
TGATGAGCTCAATAGCAAGA+GGG - chr8.2:41779164-41779183 None:intergenic 40.0%
TGTATAGAGTTGGCAAGTAC+AGG + chr8.2:41779862-41779881 MS.gene35951:intron 40.0%
TTCAGTGTGCCTCTCAATAT+TGG + chr8.2:41781838-41781857 MS.gene35951:CDS 40.0%
TTCCTGTACTTTCTGTCTCT+TGG - chr8.2:41779913-41779932 None:intergenic 40.0%
TTGAAGAGGTTATGCTTCCA+GGG + chr8.2:41779073-41779092 MS.gene35951:CDS 40.0%
TTGATGAGCTCAATAGCAAG+AGG - chr8.2:41779165-41779184 None:intergenic 40.0%
TTTACTTACATTGGCCGGAA+TGG - chr8.2:41780163-41780182 None:intergenic 40.0%
! AAGGGGTTAAGTGTTGTGTT+AGG - chr8.2:41781465-41781484 None:intergenic 40.0%
! ATATTGAGAGGCACACTGAA+TGG - chr8.2:41781838-41781857 None:intergenic 40.0%
! GAACCCTCTGAGGAATAAAT+AGG - chr8.2:41779997-41780016 None:intergenic 40.0%
! TATTGAGAGGCACACTGAAT+GGG - chr8.2:41781837-41781856 None:intergenic 40.0%
!! CTCTCAATATTGGTGATGCA+TGG + chr8.2:41781848-41781867 MS.gene35951:CDS 40.0%
!! GAGGTTGCTGTTTCAAGTAA+AGG - chr8.2:41781328-41781347 None:intergenic 40.0%
!! GGAAGTCATCAAGTCTTGTT+TGG + chr8.2:41781869-41781888 MS.gene35951:CDS 40.0%
!! GTTGCTGTTTCAAGTAAAGG+TGG - chr8.2:41781325-41781344 None:intergenic 40.0%
!! TCAGAGGGTTCTAAGTGTAT+TGG + chr8.2:41780006-41780025 MS.gene35951:CDS 40.0%
!!! CCAATCAGTTTTGACTCCTT+TGG - chr8.2:41780070-41780089 None:intergenic 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG + chr8.2:41780592-41780611 MS.gene35951:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG - chr8.2:41780611-41780592 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG + chr8.2:41780591-41780610 MS.gene35951:intron 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG - chr8.2:41780610-41780591 None:intergenic 40.0%
AAAGAGCTCTCTCTCACTCA+TGG + chr8.2:41781296-41781315 MS.gene35951:CDS 45.0%
AAGAGCTCTCTCTCACTCAT+GGG + chr8.2:41781297-41781316 MS.gene35951:CDS 45.0%
AGCTCTTTGAGCTGTAGCAT+TGG - chr8.2:41781284-41781303 None:intergenic 45.0%
AGGAATCTTGGGCAATATGC+AGG + chr8.2:41781245-41781264 MS.gene35951:intron 45.0%
AGGTTATGCTTCCAGGGTTT+AGG + chr8.2:41779079-41779098 MS.gene35951:CDS 45.0%
CACACTGAATGGGAATCCAA+TGG - chr8.2:41781827-41781846 None:intergenic 45.0%
CCAGCTCTTGTTACCCTATT+AGG - chr8.2:41779946-41779965 None:intergenic 45.0%
CCTAATAGGGTAACAAGAGC+TGG + chr8.2:41779943-41779962 MS.gene35951:CDS 45.0%
CTTGAAGAGGTTATGCTTCC+AGG + chr8.2:41779072-41779091 MS.gene35951:CDS 45.0%
GCACCCACCTAAAAACACTA+AGG + chr8.2:41780398-41780417 MS.gene35951:intron 45.0%
GCACCCACCTAAAAACACTA+AGG - chr8.2:41780417-41780398 None:intergenic 45.0%
GGAACAGTGCAAGACCTAAT+AGG + chr8.2:41779929-41779948 MS.gene35951:CDS 45.0%
GGGGGATTATAATCCTCCAA+TGG + chr8.2:41780766-41780785 MS.gene35951:intron 45.0%
GTCTTACTTGGTAGATCCCA+TGG - chr8.2:41779213-41779232 None:intergenic 45.0%
GTTGGATGAAACCTAAACCC+TGG - chr8.2:41779093-41779112 None:intergenic 45.0%
TACAAAGGTAGAGCTGCCAA+AGG + chr8.2:41780051-41780070 MS.gene35951:CDS 45.0%
TGCACTTAGTCGGATTGAGT+TGG + chr8.2:41780853-41780872 MS.gene35951:intron 45.0%
TGTGGTGCGCACGAAAAATT+AGG - chr8.2:41780885-41780904 None:intergenic 45.0%
TTGGATACAGTTCGACCCAT+TGG + chr8.2:41781808-41781827 MS.gene35951:CDS 45.0%
! CTAGAGTGACTTGCAAAGCT+AGG - chr8.2:41781418-41781437 None:intergenic 45.0%
! GGGTTCATCAGAAGTACAAG+AGG - chr8.2:41781902-41781921 None:intergenic 45.0%
! GTCCAAGAGACAGAAAGTAC+AGG + chr8.2:41779908-41779927 MS.gene35951:CDS 45.0%
!! ATATATATATATATATATAG+GGG - chr8.2:41780631-41780650 None:intergenic 5.0%
!!! TAAACTTTATTTTAATTAAA+AGG + chr8.2:41780478-41780497 MS.gene35951:intron 5.0%
CAAGTACAGGGGAGAAAGAG+TGG + chr8.2:41779875-41779894 MS.gene35951:CDS 50.0%
! GGGTAACAAGAGCTGGGTTT+TGG + chr8.2:41779950-41779969 MS.gene35951:CDS 50.0%
! TTTTCGTGCGCACCACATGT+GGG + chr8.2:41780888-41780907 MS.gene35951:intron 50.0%
! TTTTTCGTGCGCACCACATG+TGG + chr8.2:41780887-41780906 MS.gene35951:intron 50.0%
!!! GCTGGGTTTTGGAAAGCAAC+AGG + chr8.2:41779961-41779980 MS.gene35951:CDS 50.0%
ACACGAGGCACGTTCGCATT+AGG - chr8.2:41781772-41781791 None:intergenic 55.0%
AGGGTGTAGACACCCACATG+TGG - chr8.2:41780903-41780922 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 41779042 41781954 41779042 ID=MS.gene35951
chr8.2 mRNA 41779042 41781954 41779042 ID=MS.gene35951.t1;Parent=MS.gene35951
chr8.2 exon 41779042 41779225 41779042 ID=MS.gene35951.t1.exon1;Parent=MS.gene35951.t1
chr8.2 CDS 41779042 41779225 41779042 ID=cds.MS.gene35951.t1;Parent=MS.gene35951.t1
chr8.2 exon 41779869 41780173 41779869 ID=MS.gene35951.t1.exon2;Parent=MS.gene35951.t1
chr8.2 CDS 41779869 41780173 41779869 ID=cds.MS.gene35951.t1;Parent=MS.gene35951.t1
chr8.2 exon 41781247 41781954 41781247 ID=MS.gene35951.t1.exon3;Parent=MS.gene35951.t1
chr8.2 CDS 41781247 41781954 41781247 ID=cds.MS.gene35951.t1;Parent=MS.gene35951.t1
Gene Sequence

>MS.gene35951

ATGGAAGAGAGAAATGGTACTTGTGAGAAACTTGAAGAGGTTATGCTTCCAGGGTTTAGGTTTCATCCAACTGATGAAGAACTTGTTGGATTTTACCTGAAGAAAAAAATTCAGCAACGCCCTCTTGCTATTGAGCTCATCAAGCAGCTTGATATTTATAAATTTGATCCATGGGATCTACCAAGTAAGACTCATAATAGTGCTTTACTAATACATTATTACCCTAGATGTGTTTATCACTTTGACACATGAAATGTTAGTATCCAGTATTTGACCTCTTTATCACTTTACTTTTTAACTCTCTCAGATCAACCGCATCAAGCGAACCTTATATTCCCTACCTAGATGTGTAACTTACATATATTTAGAGCTTCTTTCGATTGATTTATTTGAGTTTATTTAGTAGTATAAACACTTATGAAACTATTTAGAAGAGCTTGTGAAAACAATTTCTGACATGTACATAGGTTATTTTAAGCTAATTTACATAAAACTCTTTTTGATAGCTAAACAGTTTATAGCTTATACGAAAATTGTTTGATTTTATTATATCTTTTGTTATCAAGAAAAAATTATGCAAAAGTGTTATGCTATATATATTGCTTGTTTTTTGAGTTCTTGTTCTATTTGTTGCTCTTGTATTTTGATCTCTTTTTATATAATATATATACTTGTCATTCAAAAAAAATTCACAAGTATTTATGCTACAGACGCTTAATTAAATTGTTTATCCAAACATCGTACTATAGGTAGTTTTTTGTTAAGACTTTTTGATATCTTGGTACTAATTAAAAATTAATTCTATAGTTCTGATATTTTGTGTATAGAGTTGGCAAGTACAGGGGAGAAAGAGTGGTATTTTTACTGTCCAAGAGACAGAAAGTACAGGAACAGTGCAAGACCTAATAGGGTAACAAGAGCTGGGTTTTGGAAAGCAACAGGAACAGACAGACCTATTTATTCCTCAGAGGGTTCTAAGTGTATTGGCTTGAAAAAATCCTTAGTTTTCTACAAAGGTAGAGCTGCCAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTTAGACTACCTTCTCTCATAGATTCATCATCATCTCCAAAGAAATATGTAGACAAGACCATTCCGGCCAATGTAAGTAAAATTTACTTCCCAAATCTATATTTAGTTAGAACTTGTTGGTATCATTTGATACATCTTGTTAGAATGGATACTAAGTATGTGTTTAGATCATAATAAAATATAAATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGGGGCTGTTAACTTGCACCCACCTAAAAACACTAAGGTGCAAGTTAACAAGCTGCACCTACTTGTACTTTACTAAAACACCCTTTTGTCTCTATTAAACTTTATTTTAATTAAAAGGACATTTTTGTAAATAGCATAAATAATATTTGTTTATAATTGAAAAACATGGGTGTTTTGGTAAATAACTAGAAGGTGCAGCTTGTTAACTTGCACCTTAGTGTTTTTAGGTGGGTGCAAGTTAACAGCCCCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGAGACATTTGACAAATAATCGAGTAGGTTAAGTGTGTGTAAATAATATATGTTGGGGGATTATAATCCTCCAATGGTTTATAGTATATCATGAGTAATTAGTAAAGTTATGGTATTTGGATTATCTGGTCTAACCTAAAATGCACTTAGTCGGATTGAGTTGGACTAAACCTAATTTTTCGTGCGCACCACATGTGGGTGTCTACACCCTTAAAATAAGAGGAAAAAAGAAAAGAAATATAGATTGATGTGATAGATATGATAATTTGATGATGTGATAAGAAGAGCGAGATATAGATAAAATGAGATGTTGAATAGATATATCAGAAATTAGAGTGTTCAAATATCATTGTTGTTAAAAAATTATATTTAATATGATCAAACATGCCGATCCAAAATGACTCAATTGTTTTCTGGTCAAAGTCATATATTTGAATTCTACTTGTTAAAAGAATAATTACATTATATTATATTCTATATATAACTTCATTTTGAAGTGTTTGACTGGCTAGTATTAAATGCATTCAACTTGTAGGAATCTTGGGCAATATGCAGGATATTCAAGAAAACCAATGCTACAGCTCAAAGAGCTCTCTCTCACTCATGGGTCCCACCTTTACTTGAAACAGCAACCTCCAATGTTCTAACAAATGATGCAAACCACAACCAATTTTGTTCCTCAAACATGATGATAACAAAGAAACCTAGCTTTGCAAGTCACTCTAGTACTACTAATAATAACCACAATAACCTAACACAACACTTAACCCCTTCTAGTAGTACTACACTTTGTCCCTTAGATGTTCCATCTTATAATAATCCAATTATTGATCCATTGATTTACAAACCCTTATACCGGTTACCAATTTCAAATGATCAAGATCTTAACCTTAGCACTGGCTTAGTATTCTCATCTCCTCTTGAAACATCTTGTAACAAAACTTCAATGGATTTTTCTTCCTTGCTATTAGGTATGTCATCTGAAGTAACAACTTCAAACTACATTGGTAATTTACAAGACCATTACAATAATGAGTATCCATTAATGGCTAACATTCCTAATGCGAACGTGCCTCGTGTTGATGATCAACAAGAGTTGGATACAGTTCGACCCATTGGATTCCCATTCAGTGTGCCTCTCAATATTGGTGATGCATGGAAGTCATCAAGTCTTGTTTGGGATACTTCCTCTTGTACTTCTGATGAACCCTCTAGTTATTCTACTACCAAGTGTTATACTTAG
Protein sequence

>MS.gene35951.t1

MEERNGTCEKLEEVMLPGFRFHPTDEELVGFYLKKKIQQRPLAIELIKQLDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLIDSSSSPKKYVDKTIPANESWAICRIFKKTNATAQRALSHSWVPPLLETATSNVLTNDANHNQFCSSNMMITKKPSFASHSSTTNNNHNNLTQHLTPSSSTTLCPLDVPSYNNPIIDPLIYKPLYRLPISNDQDLNLSTGLVFSSPLETSCNKTSMDFSSLLLGMSSEVTTSNYIGNLQDHYNNEYPLMANIPNANVPRVDDQQELDTVRPIGFPFSVPLNIGDAWKSSSLVWDTSSCTSDEPSSYSTTKCYT