Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051385.t1 | AES60685.2 | 92.7 | 179 | 12 | 1 | 1 | 178 | 1 | 179 | 9.70E-94 | 352.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051385.t1 | Q9ZSA8 | 42.1 | 140 | 77 | 1 | 37 | 176 | 20 | 155 | 5.0e-30 | 132.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051385.t1 | G7IA68 | 92.7 | 179 | 12 | 1 | 1 | 178 | 1 | 179 | 7.0e-94 | 352.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051385 | MS.gene054742 | 0.837016 | 6.66E-57 | -1.69E-46 |
| MS.gene051385 | MS.gene060087 | 0.80352 | 3.35E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene062006 | 0.808091 | 3.67E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene063988 | 0.829301 | 5.56E-55 | -1.69E-46 |
| MS.gene051385 | MS.gene064493 | 0.830645 | 2.61E-55 | -1.69E-46 |
| MS.gene051385 | MS.gene065724 | 0.80872 | 2.70E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene066937 | 0.814473 | 1.51E-51 | -1.69E-46 |
| MS.gene051385 | MS.gene06756 | 0.801117 | 1.05E-48 | -1.69E-46 |
| MS.gene051385 | MS.gene21380 | 0.81051 | 1.11E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene22360 | 0.802319 | 5.94E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene23436 | 0.815831 | 7.56E-52 | -1.69E-46 |
| MS.gene051385 | MS.gene23503 | 0.821851 | 3.24E-53 | -1.69E-46 |
| MS.gene051385 | MS.gene35459 | 0.810944 | 8.96E-51 | -1.69E-46 |
| MS.gene051385 | MS.gene35460 | 0.804521 | 2.08E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene35597 | 0.806358 | 8.55E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene35598 | 0.807665 | 4.52E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene35951 | 0.805145 | 1.54E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene37192 | 0.800969 | 1.12E-48 | -1.69E-46 |
| MS.gene051385 | MS.gene40171 | 0.824608 | 7.36E-54 | -1.69E-46 |
| MS.gene051385 | MS.gene40846 | 0.811286 | 7.56E-51 | -1.69E-46 |
| MS.gene051385 | MS.gene42096 | 0.824267 | 8.86E-54 | -1.69E-46 |
| MS.gene051385 | MS.gene43874 | 0.832636 | 8.44E-56 | -1.69E-46 |
| MS.gene051385 | MS.gene46024 | 0.81648 | 5.41E-52 | -1.69E-46 |
| MS.gene051385 | MS.gene46025 | 0.809303 | 2.02E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene47397 | 0.827081 | 1.90E-54 | -1.69E-46 |
| MS.gene051385 | MS.gene48169 | 0.806969 | 6.35E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene48807 | 0.844674 | 6.53E-59 | -1.69E-46 |
| MS.gene051385 | MS.gene48885 | 0.826333 | 2.87E-54 | -1.69E-46 |
| MS.gene051385 | MS.gene50279 | 0.816299 | 5.94E-52 | -1.69E-46 |
| MS.gene051385 | MS.gene50789 | 0.815677 | 8.18E-52 | -1.69E-46 |
| MS.gene051385 | MS.gene54029 | 0.809705 | 1.66E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene58786 | 0.828463 | 8.86E-55 | -1.69E-46 |
| MS.gene051385 | MS.gene59002 | 0.808192 | 3.49E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene59395 | 0.801333 | 9.46E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene59920 | 0.808969 | 2.39E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene65724 | 0.818117 | 2.32E-52 | -1.69E-46 |
| MS.gene051385 | MS.gene68453 | 0.820479 | 6.71E-53 | -1.69E-46 |
| MS.gene051385 | MS.gene70062 | 0.808494 | 3.01E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene75396 | 0.801371 | 9.30E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene76737 | 0.82581 | 3.83E-54 | -1.69E-46 |
| MS.gene051385 | MS.gene76738 | 0.804742 | 1.87E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene77033 | 0.827543 | 1.48E-54 | -1.69E-46 |
| MS.gene051385 | MS.gene78618 | 0.812249 | 4.66E-51 | -1.69E-46 |
| MS.gene051385 | MS.gene80744 | 0.802766 | 4.80E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene81349 | 0.802844 | 4.63E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene82244 | 0.807723 | 4.40E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene82245 | 0.800762 | 1.24E-48 | -1.69E-46 |
| MS.gene051385 | MS.gene82857 | 0.801375 | 9.27E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene84143 | 0.801577 | 8.43E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene84568 | 0.814753 | 1.31E-51 | -1.69E-46 |
| MS.gene051385 | MS.gene85750 | 0.804557 | 2.04E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene94790 | 0.808291 | 3.33E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene96171 | 0.8016 | 8.34E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene97182 | 0.801893 | 7.26E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene97354 | 0.810248 | 1.27E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene97500 | 0.801626 | 8.24E-49 | -1.69E-46 |
| MS.gene051385 | MS.gene97790 | 0.800533 | 1.38E-48 | -1.69E-46 |
| MS.gene051385 | MS.gene98470 | 0.80799 | 3.86E-50 | -1.69E-46 |
| MS.gene051385 | MS.gene99062 | 0.806738 | 7.11E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051385.t1 | MTR_1g062110 | 92.737 | 179 | 12 | 1 | 1 | 178 | 1 | 179 | 8.84e-122 | 349 |
| MS.gene051385.t1 | MTR_1g062110 | 92.737 | 179 | 12 | 1 | 1 | 178 | 1 | 179 | 1.46e-121 | 346 |
| MS.gene051385.t1 | MTR_7g102820 | 65.217 | 184 | 62 | 2 | 1 | 182 | 1 | 184 | 2.85e-85 | 256 |
| MS.gene051385.t1 | MTR_7g081710 | 41.558 | 154 | 85 | 3 | 23 | 175 | 11 | 160 | 8.96e-38 | 133 |
| MS.gene051385.t1 | MTR_8g024120 | 44.366 | 142 | 75 | 2 | 34 | 175 | 15 | 152 | 2.99e-35 | 126 |
| MS.gene051385.t1 | MTR_1g048940 | 36.538 | 156 | 90 | 2 | 31 | 184 | 18 | 166 | 4.92e-30 | 113 |
| MS.gene051385.t1 | MTR_3g092890 | 41.007 | 139 | 74 | 3 | 37 | 175 | 15 | 145 | 8.82e-29 | 109 |
| MS.gene051385.t1 | MTR_5g065010 | 34.104 | 173 | 100 | 5 | 25 | 189 | 3 | 169 | 5.08e-26 | 102 |
| MS.gene051385.t1 | MTR_1g070080 | 31.818 | 154 | 98 | 4 | 26 | 176 | 1 | 150 | 3.37e-23 | 94.7 |
| MS.gene051385.t1 | MTR_7g068650 | 34.356 | 163 | 90 | 6 | 26 | 178 | 15 | 170 | 2.48e-22 | 92.8 |
| MS.gene051385.t1 | MTR_1g070120 | 32.258 | 155 | 96 | 4 | 26 | 176 | 1 | 150 | 3.23e-22 | 92.0 |
| MS.gene051385.t1 | MTR_2g068840 | 32.121 | 165 | 101 | 3 | 24 | 185 | 20 | 176 | 5.75e-22 | 91.7 |
| MS.gene051385.t1 | MTR_2g068850 | 33.113 | 151 | 94 | 2 | 24 | 173 | 20 | 164 | 2.23e-21 | 87.8 |
| MS.gene051385.t1 | MTR_1g070135 | 32.192 | 146 | 91 | 3 | 32 | 175 | 10 | 149 | 2.27e-21 | 89.0 |
| MS.gene051385.t1 | MTR_4g015790 | 31.361 | 169 | 96 | 6 | 26 | 178 | 14 | 178 | 2.54e-21 | 90.1 |
| MS.gene051385.t1 | MTR_1g070135 | 32.192 | 146 | 91 | 3 | 32 | 175 | 10 | 149 | 3.65e-21 | 89.4 |
| MS.gene051385.t1 | MTR_3g043900 | 34.545 | 165 | 102 | 4 | 8 | 172 | 1 | 159 | 5.99e-21 | 88.6 |
| MS.gene051385.t1 | MTR_1g032140 | 31.818 | 154 | 100 | 4 | 12 | 165 | 17 | 165 | 1.89e-20 | 87.4 |
| MS.gene051385.t1 | MTR_3g045230 | 33.544 | 158 | 100 | 3 | 15 | 172 | 8 | 160 | 4.60e-20 | 86.3 |
| MS.gene051385.t1 | MTR_1g070085 | 31.507 | 146 | 92 | 3 | 32 | 175 | 9 | 148 | 1.13e-19 | 85.1 |
| MS.gene051385.t1 | MTR_1g070085 | 31.507 | 146 | 92 | 3 | 32 | 175 | 9 | 148 | 1.13e-19 | 85.1 |
| MS.gene051385.t1 | MTR_8g041600 | 33.103 | 145 | 89 | 2 | 25 | 165 | 32 | 172 | 1.14e-19 | 84.7 |
| MS.gene051385.t1 | MTR_7g062550 | 33.766 | 154 | 89 | 6 | 26 | 175 | 25 | 169 | 1.16e-19 | 85.5 |
| MS.gene051385.t1 | MTR_4g093840 | 35.211 | 142 | 79 | 5 | 43 | 175 | 35 | 172 | 1.52e-19 | 85.1 |
| MS.gene051385.t1 | MTR_7g062580 | 33.803 | 142 | 82 | 5 | 25 | 163 | 19 | 151 | 1.76e-19 | 84.7 |
| MS.gene051385.t1 | MTR_8g041600 | 33.103 | 145 | 89 | 2 | 25 | 165 | 32 | 172 | 2.21e-19 | 84.7 |
| MS.gene051385.t1 | MTR_1g032250 | 32.394 | 142 | 92 | 3 | 24 | 165 | 35 | 172 | 2.23e-19 | 84.7 |
| MS.gene051385.t1 | MTR_7g105070 | 29.221 | 154 | 101 | 4 | 12 | 163 | 11 | 158 | 2.64e-19 | 84.3 |
| MS.gene051385.t1 | MTR_2g068950 | 31.737 | 167 | 109 | 2 | 25 | 189 | 26 | 189 | 2.91e-19 | 84.3 |
| MS.gene051385.t1 | MTR_1g032220 | 31.818 | 154 | 100 | 4 | 12 | 165 | 24 | 172 | 3.03e-19 | 84.3 |
| MS.gene051385.t1 | MTR_2g069020 | 29.648 | 199 | 120 | 5 | 5 | 189 | 1 | 193 | 3.37e-19 | 84.0 |
| MS.gene051385.t1 | MTR_2g069020 | 29.648 | 199 | 120 | 5 | 5 | 189 | 1 | 193 | 4.12e-19 | 84.0 |
| MS.gene051385.t1 | MTR_8g041620 | 33.793 | 145 | 88 | 2 | 25 | 165 | 32 | 172 | 4.85e-19 | 83.6 |
| MS.gene051385.t1 | MTR_3g070860 | 30.769 | 156 | 95 | 5 | 26 | 175 | 15 | 163 | 6.65e-19 | 83.2 |
| MS.gene051385.t1 | MTR_2g068960 | 31.737 | 167 | 109 | 3 | 25 | 189 | 26 | 189 | 1.06e-18 | 82.8 |
| MS.gene051385.t1 | MTR_2g437380 | 29.885 | 174 | 107 | 5 | 15 | 182 | 6 | 170 | 1.65e-18 | 82.0 |
| MS.gene051385.t1 | MTR_7g045650 | 32.258 | 155 | 90 | 7 | 26 | 175 | 25 | 169 | 3.30e-18 | 80.9 |
| MS.gene051385.t1 | MTR_7g062570 | 30.519 | 154 | 94 | 6 | 26 | 175 | 20 | 164 | 4.44e-18 | 80.9 |
| MS.gene051385.t1 | MTR_3g091350 | 32.051 | 156 | 94 | 6 | 23 | 172 | 20 | 169 | 4.47e-18 | 80.9 |
| MS.gene051385.t1 | MTR_0032s0040 | 31.973 | 147 | 92 | 4 | 25 | 165 | 27 | 171 | 1.74e-17 | 79.3 |
| MS.gene051385.t1 | MTR_5g011250 | 29.375 | 160 | 106 | 5 | 26 | 179 | 8 | 166 | 2.45e-17 | 79.0 |
| MS.gene051385.t1 | MTR_0328s0030 | 28.767 | 146 | 97 | 4 | 25 | 170 | 10 | 148 | 2.71e-17 | 78.6 |
| MS.gene051385.t1 | MTR_5g048740 | 31.293 | 147 | 92 | 4 | 25 | 170 | 10 | 148 | 2.96e-17 | 78.6 |
| MS.gene051385.t1 | MTR_2g069010 | 32.667 | 150 | 93 | 3 | 25 | 169 | 32 | 178 | 4.53e-17 | 78.2 |
| MS.gene051385.t1 | MTR_0009s0410 | 29.730 | 148 | 93 | 5 | 25 | 170 | 11 | 149 | 6.30e-17 | 74.7 |
| MS.gene051385.t1 | MTR_3g063180 | 32.680 | 153 | 91 | 6 | 26 | 173 | 10 | 155 | 9.13e-17 | 77.0 |
| MS.gene051385.t1 | MTR_2g068800 | 31.333 | 150 | 79 | 2 | 24 | 173 | 20 | 145 | 1.31e-16 | 75.9 |
| MS.gene051385.t1 | MTR_7g062600 | 31.613 | 155 | 91 | 7 | 26 | 175 | 16 | 160 | 1.32e-16 | 76.6 |
| MS.gene051385.t1 | MTR_1g070185 | 29.375 | 160 | 103 | 3 | 1 | 155 | 5 | 159 | 1.38e-16 | 76.6 |
| MS.gene051385.t1 | MTR_2g069210 | 31.410 | 156 | 97 | 4 | 10 | 163 | 17 | 164 | 1.39e-16 | 76.6 |
| MS.gene051385.t1 | MTR_7g078010 | 31.210 | 157 | 97 | 4 | 11 | 165 | 22 | 169 | 1.79e-16 | 75.9 |
| MS.gene051385.t1 | MTR_8g062600 | 30.000 | 170 | 106 | 4 | 25 | 189 | 32 | 193 | 1.94e-16 | 76.3 |
| MS.gene051385.t1 | MTR_7g078010 | 31.210 | 157 | 97 | 4 | 11 | 165 | 22 | 169 | 2.88e-16 | 75.9 |
| MS.gene051385.t1 | MTR_7g016080 | 27.660 | 141 | 95 | 3 | 36 | 175 | 15 | 149 | 3.32e-16 | 75.5 |
| MS.gene051385.t1 | MTR_5g055800 | 28.947 | 152 | 97 | 5 | 25 | 172 | 12 | 156 | 4.09e-16 | 75.5 |
| MS.gene051385.t1 | MTR_5g048470 | 29.371 | 143 | 88 | 3 | 25 | 163 | 17 | 150 | 4.36e-16 | 75.5 |
| MS.gene051385.t1 | MTR_7g029655 | 28.058 | 139 | 99 | 1 | 25 | 163 | 27 | 164 | 4.41e-16 | 75.5 |
| MS.gene051385.t1 | MTR_3g091360 | 30.714 | 140 | 90 | 4 | 39 | 172 | 24 | 162 | 4.47e-16 | 75.1 |
| MS.gene051385.t1 | MTR_2g069190 | 31.818 | 154 | 93 | 5 | 10 | 161 | 21 | 164 | 5.29e-16 | 75.1 |
| MS.gene051385.t1 | MTR_2g069060 | 34.586 | 133 | 78 | 3 | 50 | 178 | 37 | 164 | 7.80e-16 | 74.7 |
| MS.gene051385.t1 | MTR_5g082750 | 31.847 | 157 | 92 | 6 | 26 | 175 | 14 | 162 | 8.11e-16 | 74.7 |
| MS.gene051385.t1 | MTR_7g063730 | 34.426 | 122 | 73 | 4 | 64 | 182 | 63 | 180 | 8.35e-16 | 74.7 |
| MS.gene051385.t1 | MTR_0009s0480 | 29.730 | 148 | 93 | 5 | 25 | 170 | 11 | 149 | 8.78e-16 | 73.6 |
| MS.gene051385.t1 | MTR_1g093120 | 32.192 | 146 | 92 | 4 | 24 | 165 | 27 | 169 | 1.35e-15 | 73.9 |
| MS.gene051385.t1 | MTR_2g069300 | 31.447 | 159 | 97 | 6 | 10 | 166 | 7 | 155 | 1.41e-15 | 73.9 |
| MS.gene051385.t1 | MTR_2g069090 | 30.519 | 154 | 95 | 5 | 10 | 161 | 21 | 164 | 1.69e-15 | 73.6 |
| MS.gene051385.t1 | MTR_1g027310 | 30.070 | 143 | 90 | 4 | 34 | 172 | 18 | 154 | 1.75e-15 | 73.2 |
| MS.gene051385.t1 | MTR_8g009160 | 32.192 | 146 | 85 | 5 | 25 | 166 | 27 | 162 | 1.85e-15 | 73.6 |
| MS.gene051385.t1 | MTR_0009s0480 | 29.730 | 148 | 93 | 5 | 25 | 170 | 11 | 149 | 2.18e-15 | 73.2 |
| MS.gene051385.t1 | MTR_7g102720 | 34.259 | 108 | 68 | 1 | 65 | 172 | 37 | 141 | 3.81e-15 | 72.4 |
| MS.gene051385.t1 | MTR_2g069060 | 32.353 | 136 | 86 | 2 | 47 | 178 | 9 | 142 | 5.79e-15 | 71.2 |
| MS.gene051385.t1 | MTR_4g024660 | 28.477 | 151 | 101 | 3 | 25 | 173 | 32 | 177 | 6.09e-15 | 72.0 |
| MS.gene051385.t1 | MTR_1g093140 | 31.081 | 148 | 94 | 5 | 25 | 165 | 29 | 175 | 6.97e-15 | 72.0 |
| MS.gene051385.t1 | MTR_1g043810 | 29.714 | 175 | 103 | 8 | 10 | 178 | 2 | 162 | 7.71e-15 | 71.6 |
| MS.gene051385.t1 | MTR_1g043810 | 29.714 | 175 | 103 | 8 | 10 | 178 | 2 | 162 | 8.33e-15 | 71.6 |
| MS.gene051385.t1 | MTR_1g093110 | 30.822 | 146 | 94 | 4 | 25 | 165 | 29 | 172 | 8.77e-15 | 71.6 |
| MS.gene051385.t1 | MTR_7g016090 | 27.673 | 159 | 100 | 5 | 36 | 187 | 15 | 165 | 1.34e-14 | 70.9 |
| MS.gene051385.t1 | MTR_7g016090 | 27.673 | 159 | 100 | 5 | 36 | 187 | 17 | 167 | 1.44e-14 | 70.9 |
| MS.gene051385.t1 | MTR_2g072890 | 29.861 | 144 | 88 | 4 | 31 | 170 | 23 | 157 | 1.47e-14 | 70.9 |
| MS.gene051385.t1 | MTR_5g048850 | 27.703 | 148 | 96 | 5 | 25 | 170 | 12 | 150 | 1.65e-14 | 70.1 |
| MS.gene051385.t1 | MTR_8g064200 | 28.058 | 139 | 94 | 2 | 25 | 163 | 17 | 149 | 2.07e-14 | 70.5 |
| MS.gene051385.t1 | MTR_5g032880 | 30.986 | 142 | 89 | 4 | 36 | 173 | 352 | 488 | 2.28e-14 | 70.9 |
| MS.gene051385.t1 | MTR_5g032880 | 30.147 | 136 | 82 | 4 | 41 | 174 | 19 | 143 | 1.86e-12 | 65.5 |
| MS.gene051385.t1 | MTR_8g064200 | 28.058 | 139 | 94 | 2 | 25 | 163 | 22 | 154 | 2.45e-14 | 70.5 |
| MS.gene051385.t1 | MTR_5g032870 | 32.117 | 137 | 84 | 3 | 41 | 173 | 19 | 150 | 2.58e-14 | 70.1 |
| MS.gene051385.t1 | MTR_3g058610 | 31.206 | 141 | 79 | 5 | 51 | 175 | 13 | 151 | 2.93e-14 | 70.1 |
| MS.gene051385.t1 | MTR_5g055820 | 29.054 | 148 | 94 | 5 | 25 | 170 | 12 | 150 | 3.51e-14 | 69.7 |
| MS.gene051385.t1 | MTR_5g048850 | 27.703 | 148 | 96 | 5 | 25 | 170 | 12 | 150 | 3.78e-14 | 69.7 |
| MS.gene051385.t1 | MTR_8g075890 | 31.293 | 147 | 86 | 7 | 35 | 175 | 14 | 151 | 3.87e-14 | 69.7 |
| MS.gene051385.t1 | MTR_8g009090 | 31.210 | 157 | 91 | 6 | 25 | 176 | 27 | 171 | 4.29e-14 | 69.7 |
| MS.gene051385.t1 | MTR_3g088565 | 44.615 | 65 | 36 | 0 | 63 | 127 | 1 | 65 | 4.30e-14 | 69.3 |
| MS.gene051385.t1 | MTR_6g015950 | 29.252 | 147 | 94 | 3 | 31 | 175 | 10 | 148 | 5.25e-14 | 69.3 |
| MS.gene051385.t1 | MTR_4g099380 | 30.000 | 150 | 92 | 5 | 25 | 169 | 137 | 278 | 6.05e-14 | 68.6 |
| MS.gene051385.t1 | MTR_1g043770 | 29.444 | 180 | 110 | 7 | 9 | 186 | 4 | 168 | 6.37e-14 | 69.3 |
| MS.gene051385.t1 | MTR_8g009120 | 30.872 | 149 | 90 | 4 | 24 | 168 | 26 | 165 | 7.45e-14 | 68.9 |
| MS.gene051385.t1 | MTR_2g072930 | 27.211 | 147 | 100 | 3 | 25 | 170 | 16 | 156 | 7.63e-14 | 66.6 |
| MS.gene051385.t1 | MTR_3g072820 | 30.769 | 143 | 90 | 4 | 35 | 175 | 16 | 151 | 8.07e-14 | 68.9 |
| MS.gene051385.t1 | MTR_8g009150 | 30.872 | 149 | 90 | 4 | 24 | 168 | 26 | 165 | 8.59e-14 | 68.6 |
| MS.gene051385.t1 | MTR_1g043775 | 31.609 | 174 | 98 | 9 | 10 | 178 | 5 | 162 | 8.66e-14 | 68.6 |
| MS.gene051385.t1 | MTR_1g043770 | 29.444 | 180 | 110 | 7 | 9 | 186 | 4 | 168 | 9.25e-14 | 68.2 |
| MS.gene051385.t1 | MTR_7g056393 | 27.389 | 157 | 103 | 3 | 11 | 165 | 22 | 169 | 9.62e-14 | 68.6 |
| MS.gene051385.t1 | MTR_1g043775 | 31.609 | 174 | 98 | 9 | 10 | 178 | 5 | 162 | 1.05e-13 | 68.6 |
| MS.gene051385.t1 | MTR_2g072910 | 28.205 | 156 | 104 | 4 | 25 | 178 | 16 | 165 | 1.13e-13 | 67.8 |
| MS.gene051385.t1 | MTR_8g028435 | 30.769 | 156 | 93 | 5 | 25 | 176 | 27 | 171 | 1.25e-13 | 68.6 |
| MS.gene051385.t1 | MTR_7g056347 | 28.025 | 157 | 102 | 4 | 11 | 165 | 22 | 169 | 1.43e-13 | 68.2 |
| MS.gene051385.t1 | MTR_8g006930 | 28.049 | 164 | 104 | 5 | 11 | 169 | 22 | 176 | 1.46e-13 | 68.2 |
| MS.gene051385.t1 | MTR_2g072910 | 28.205 | 156 | 104 | 4 | 25 | 178 | 16 | 165 | 1.69e-13 | 67.8 |
| MS.gene051385.t1 | MTR_8g074050 | 30.159 | 126 | 85 | 3 | 59 | 182 | 46 | 170 | 2.29e-13 | 67.4 |
| MS.gene051385.t1 | MTR_8g009110 | 30.345 | 145 | 87 | 5 | 25 | 165 | 27 | 161 | 2.42e-13 | 67.4 |
| MS.gene051385.t1 | MTR_8g009170 | 29.104 | 134 | 85 | 3 | 25 | 155 | 27 | 153 | 3.15e-13 | 66.6 |
| MS.gene051385.t1 | MTR_5g048550 | 27.451 | 153 | 98 | 5 | 20 | 169 | 7 | 149 | 3.67e-13 | 67.0 |
| MS.gene051385.t1 | MTR_8g009170 | 29.104 | 134 | 85 | 3 | 25 | 155 | 27 | 153 | 5.27e-13 | 66.6 |
| MS.gene051385.t1 | MTR_8g063070 | 28.205 | 156 | 105 | 4 | 25 | 178 | 32 | 182 | 9.32e-13 | 65.9 |
| MS.gene051385.t1 | MTR_4g119410 | 27.389 | 157 | 103 | 3 | 11 | 165 | 22 | 169 | 9.50e-13 | 65.9 |
| MS.gene051385.t1 | MTR_8g008930 | 31.646 | 158 | 90 | 7 | 25 | 176 | 27 | 172 | 1.09e-12 | 65.9 |
| MS.gene051385.t1 | MTR_8g469400 | 28.402 | 169 | 101 | 4 | 25 | 189 | 32 | 184 | 1.11e-12 | 65.5 |
| MS.gene051385.t1 | MTR_4g117880 | 31.507 | 146 | 85 | 6 | 26 | 166 | 28 | 163 | 1.45e-12 | 65.5 |
| MS.gene051385.t1 | MTR_8g075830 | 30.345 | 145 | 90 | 6 | 35 | 175 | 14 | 151 | 2.03e-12 | 65.1 |
| MS.gene051385.t1 | MTR_3g117485 | 29.448 | 163 | 100 | 5 | 18 | 172 | 5 | 160 | 2.12e-12 | 64.7 |
| MS.gene051385.t1 | MTR_5g022020 | 29.060 | 117 | 75 | 4 | 64 | 175 | 38 | 151 | 2.15e-12 | 64.7 |
| MS.gene051385.t1 | MTR_8g009080 | 29.530 | 149 | 95 | 4 | 9 | 155 | 46 | 186 | 2.61e-12 | 64.3 |
| MS.gene051385.t1 | MTR_8g009080 | 29.530 | 149 | 95 | 4 | 9 | 155 | 46 | 186 | 3.03e-12 | 64.3 |
| MS.gene051385.t1 | MTR_7g056370 | 27.972 | 143 | 96 | 2 | 25 | 165 | 11 | 148 | 3.05e-12 | 63.2 |
| MS.gene051385.t1 | MTR_2g069070 | 33.898 | 118 | 69 | 3 | 50 | 163 | 37 | 149 | 3.16e-12 | 62.8 |
| MS.gene051385.t1 | MTR_8g009080 | 29.530 | 149 | 95 | 4 | 9 | 155 | 46 | 186 | 3.53e-12 | 63.9 |
| MS.gene051385.t1 | MTR_0009s0050 | 28.966 | 145 | 90 | 6 | 25 | 167 | 12 | 145 | 3.76e-12 | 63.9 |
| MS.gene051385.t1 | MTR_0009s0050 | 28.966 | 145 | 90 | 6 | 25 | 167 | 12 | 145 | 4.00e-12 | 63.9 |
| MS.gene051385.t1 | MTR_8g074070 | 30.952 | 126 | 84 | 3 | 59 | 182 | 46 | 170 | 4.34e-12 | 63.9 |
| MS.gene051385.t1 | MTR_8g074070 | 31.452 | 124 | 82 | 3 | 59 | 180 | 46 | 168 | 4.76e-12 | 63.5 |
| MS.gene051385.t1 | MTR_1g043760 | 26.316 | 171 | 113 | 5 | 10 | 176 | 2 | 163 | 4.95e-12 | 63.9 |
| MS.gene051385.t1 | MTR_5g055690 | 25.175 | 143 | 95 | 3 | 25 | 164 | 12 | 145 | 6.07e-12 | 63.2 |
| MS.gene051385.t1 | MTR_5g055680 | 28.472 | 144 | 90 | 6 | 26 | 167 | 13 | 145 | 1.32e-11 | 62.4 |
| MS.gene051385.t1 | MTR_5g055690 | 24.658 | 146 | 104 | 3 | 25 | 170 | 12 | 151 | 1.34e-11 | 62.4 |
| MS.gene051385.t1 | MTR_5g055900 | 26.897 | 145 | 93 | 6 | 25 | 167 | 12 | 145 | 1.49e-11 | 62.4 |
| MS.gene051385.t1 | MTR_5g059130 | 28.743 | 167 | 98 | 7 | 32 | 187 | 15 | 171 | 1.51e-11 | 62.4 |
| MS.gene051385.t1 | MTR_5g048570 | 26.897 | 145 | 91 | 6 | 25 | 167 | 12 | 143 | 1.65e-11 | 62.4 |
| MS.gene051385.t1 | MTR_3g117420 | 29.245 | 106 | 73 | 2 | 59 | 163 | 46 | 150 | 2.01e-11 | 62.0 |
| MS.gene051385.t1 | MTR_5g059140 | 29.452 | 146 | 92 | 4 | 36 | 177 | 17 | 155 | 2.89e-11 | 61.6 |
| MS.gene051385.t1 | MTR_4g100600 | 43.939 | 66 | 34 | 1 | 62 | 127 | 6 | 68 | 4.22e-11 | 60.1 |
| MS.gene051385.t1 | MTR_1g044105 | 29.050 | 179 | 117 | 7 | 9 | 183 | 4 | 176 | 6.53e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051385.t1 | AT2G36690 | 58.889 | 180 | 66 | 3 | 1 | 178 | 1 | 174 | 7.65e-72 | 221 |
| MS.gene051385.t1 | AT2G36690 | 58.889 | 180 | 66 | 3 | 1 | 178 | 1 | 174 | 7.65e-72 | 221 |
| MS.gene051385.t1 | AT2G44800 | 39.865 | 148 | 85 | 2 | 29 | 175 | 19 | 163 | 8.63e-36 | 128 |
| MS.gene051385.t1 | AT4G10500 | 41.781 | 146 | 73 | 2 | 37 | 178 | 20 | 157 | 1.46e-35 | 127 |
| MS.gene051385.t1 | AT4G10490 | 37.888 | 161 | 84 | 3 | 22 | 178 | 7 | 155 | 6.76e-35 | 125 |
| MS.gene051385.t1 | AT3G60290 | 38.365 | 159 | 94 | 2 | 18 | 175 | 8 | 163 | 1.16e-34 | 125 |
| MS.gene051385.t1 | AT5G07480 | 39.456 | 147 | 79 | 3 | 31 | 175 | 18 | 156 | 4.94e-29 | 110 |
| MS.gene051385.t1 | AT5G24530 | 35.714 | 154 | 81 | 4 | 28 | 175 | 4 | 145 | 4.82e-28 | 107 |
| MS.gene051385.t1 | AT1G55290 | 38.312 | 154 | 84 | 4 | 24 | 174 | 24 | 169 | 1.17e-27 | 107 |
| MS.gene051385.t1 | AT3G13610 | 33.113 | 151 | 93 | 3 | 24 | 173 | 25 | 168 | 9.06e-26 | 102 |
| MS.gene051385.t1 | AT3G12900 | 34.667 | 150 | 92 | 2 | 24 | 172 | 20 | 164 | 1.75e-23 | 95.9 |
| MS.gene051385.t1 | AT2G38240 | 33.121 | 157 | 86 | 5 | 26 | 175 | 12 | 156 | 7.71e-23 | 94.0 |
| MS.gene051385.t1 | AT5G12270 | 35.429 | 175 | 93 | 7 | 5 | 172 | 1 | 162 | 3.23e-20 | 87.0 |
| MS.gene051385.t1 | AT2G30840 | 30.939 | 181 | 106 | 7 | 9 | 183 | 8 | 175 | 1.43e-18 | 81.6 |
| MS.gene051385.t1 | AT2G30840 | 30.939 | 181 | 106 | 7 | 9 | 183 | 8 | 175 | 1.62e-18 | 82.0 |
| MS.gene051385.t1 | AT2G30840 | 30.939 | 181 | 106 | 7 | 9 | 183 | 8 | 175 | 1.65e-18 | 82.0 |
| MS.gene051385.t1 | AT3G11180 | 30.128 | 156 | 102 | 4 | 26 | 178 | 56 | 207 | 6.26e-18 | 80.9 |
| MS.gene051385.t1 | AT3G11180 | 30.128 | 156 | 102 | 4 | 26 | 178 | 56 | 207 | 6.28e-18 | 80.9 |
| MS.gene051385.t1 | AT5G05600 | 30.000 | 180 | 101 | 7 | 26 | 186 | 27 | 200 | 1.00e-16 | 76.6 |
| MS.gene051385.t1 | AT5G05600 | 29.442 | 197 | 114 | 7 | 10 | 187 | 11 | 201 | 1.94e-16 | 76.3 |
| MS.gene051385.t1 | AT1G03410 | 31.902 | 163 | 96 | 6 | 9 | 166 | 7 | 159 | 2.38e-16 | 76.3 |
| MS.gene051385.t1 | AT1G03410 | 31.902 | 163 | 96 | 6 | 9 | 166 | 44 | 196 | 3.86e-16 | 75.9 |
| MS.gene051385.t1 | AT3G55970 | 30.769 | 156 | 100 | 5 | 26 | 176 | 14 | 166 | 4.72e-16 | 74.7 |
| MS.gene051385.t1 | AT3G55970 | 30.769 | 156 | 100 | 5 | 26 | 176 | 14 | 166 | 8.54e-16 | 74.7 |
| MS.gene051385.t1 | AT3G21420 | 32.515 | 163 | 100 | 5 | 23 | 179 | 14 | 172 | 4.33e-15 | 72.4 |
| MS.gene051385.t1 | AT2G30830 | 30.625 | 160 | 99 | 4 | 20 | 176 | 15 | 165 | 4.93e-15 | 72.4 |
| MS.gene051385.t1 | AT5G43440 | 30.986 | 142 | 94 | 3 | 25 | 165 | 23 | 161 | 1.11e-14 | 70.9 |
| MS.gene051385.t1 | AT1G06620 | 28.931 | 159 | 96 | 5 | 24 | 178 | 25 | 170 | 1.88e-14 | 70.1 |
| MS.gene051385.t1 | AT5G43440 | 30.986 | 142 | 94 | 3 | 25 | 165 | 23 | 161 | 1.99e-14 | 70.9 |
| MS.gene051385.t1 | AT5G43450 | 29.375 | 160 | 107 | 3 | 9 | 166 | 5 | 160 | 2.06e-14 | 70.1 |
| MS.gene051385.t1 | AT5G20550 | 29.630 | 162 | 107 | 5 | 18 | 176 | 1 | 158 | 2.22e-14 | 70.5 |
| MS.gene051385.t1 | AT2G25450 | 28.025 | 157 | 102 | 3 | 9 | 163 | 8 | 155 | 2.32e-14 | 70.5 |
| MS.gene051385.t1 | AT4G25420 | 30.400 | 125 | 77 | 3 | 37 | 159 | 40 | 156 | 2.57e-14 | 70.1 |
| MS.gene051385.t1 | AT5G43450 | 29.375 | 160 | 107 | 3 | 9 | 166 | 5 | 160 | 3.14e-14 | 70.1 |
| MS.gene051385.t1 | AT1G06620 | 28.931 | 159 | 96 | 5 | 24 | 178 | 25 | 170 | 4.18e-14 | 69.7 |
| MS.gene051385.t1 | AT4G25420 | 30.400 | 125 | 77 | 3 | 37 | 159 | 40 | 156 | 4.93e-14 | 69.7 |
| MS.gene051385.t1 | AT3G19010 | 40.000 | 95 | 50 | 3 | 41 | 133 | 8 | 97 | 3.90e-13 | 66.6 |
| MS.gene051385.t1 | AT3G19010 | 40.000 | 95 | 50 | 3 | 41 | 133 | 8 | 97 | 5.54e-13 | 66.6 |
| MS.gene051385.t1 | AT3G19010 | 40.000 | 95 | 50 | 3 | 41 | 133 | 8 | 97 | 5.54e-13 | 66.6 |
| MS.gene051385.t1 | AT3G19010 | 40.000 | 95 | 50 | 3 | 41 | 133 | 8 | 97 | 7.42e-13 | 65.9 |
| MS.gene051385.t1 | AT1G04350 | 28.750 | 160 | 94 | 6 | 24 | 178 | 20 | 164 | 9.60e-13 | 65.9 |
| MS.gene051385.t1 | AT4G22880 | 25.949 | 158 | 111 | 4 | 26 | 177 | 7 | 164 | 1.79e-12 | 65.1 |
| MS.gene051385.t1 | AT4G22880 | 25.949 | 158 | 111 | 4 | 26 | 177 | 7 | 164 | 1.79e-12 | 65.1 |
| MS.gene051385.t1 | AT4G22880 | 25.949 | 158 | 111 | 4 | 26 | 177 | 7 | 164 | 1.79e-12 | 65.1 |
| MS.gene051385.t1 | AT5G08640 | 30.894 | 123 | 77 | 3 | 36 | 157 | 18 | 133 | 1.86e-12 | 65.1 |
| MS.gene051385.t1 | AT5G08640 | 30.894 | 123 | 77 | 3 | 36 | 157 | 18 | 133 | 1.86e-12 | 65.1 |
| MS.gene051385.t1 | AT1G17010 | 29.577 | 142 | 94 | 4 | 25 | 164 | 16 | 153 | 2.01e-12 | 65.1 |
| MS.gene051385.t1 | AT5G59530 | 26.744 | 172 | 108 | 7 | 25 | 185 | 23 | 187 | 2.78e-12 | 64.7 |
| MS.gene051385.t1 | AT1G17020 | 25.926 | 162 | 113 | 4 | 11 | 170 | 2 | 158 | 7.52e-12 | 63.2 |
| MS.gene051385.t1 | AT5G54000 | 27.950 | 161 | 110 | 5 | 18 | 175 | 1 | 158 | 1.16e-11 | 62.8 |
| MS.gene051385.t1 | AT1G06645 | 25.466 | 161 | 110 | 4 | 9 | 165 | 26 | 180 | 1.78e-11 | 62.4 |
| MS.gene051385.t1 | AT1G04380 | 28.873 | 142 | 87 | 4 | 37 | 178 | 23 | 150 | 2.82e-11 | 61.2 |
| MS.gene051385.t1 | AT3G61400 | 25.000 | 172 | 117 | 4 | 1 | 165 | 1 | 167 | 3.33e-11 | 61.2 |
| MS.gene051385.t1 | AT3G61400 | 24.737 | 190 | 127 | 6 | 1 | 183 | 1 | 181 | 3.84e-11 | 61.2 |
| MS.gene051385.t1 | AT1G03400 | 26.351 | 148 | 100 | 2 | 25 | 172 | 19 | 157 | 4.13e-11 | 61.2 |
| MS.gene051385.t1 | AT1G04380 | 28.873 | 142 | 87 | 4 | 37 | 178 | 23 | 150 | 4.60e-11 | 60.8 |
| MS.gene051385.t1 | AT5G43935 | 33.065 | 124 | 77 | 4 | 64 | 186 | 18 | 136 | 4.83e-11 | 60.8 |
| MS.gene051385.t1 | AT3G49620 | 32.110 | 109 | 57 | 3 | 65 | 156 | 34 | 142 | 7.37e-11 | 60.5 |
| MS.gene051385.t1 | AT1G03400 | 26.351 | 148 | 100 | 2 | 25 | 172 | 19 | 157 | 8.62e-11 | 60.5 |
Find 42 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGGACTTGAGGCCTATT+TGG | 0.218488 | 1.1:-46932953 | None:intergenic |
| CTGATTTGATTGGTCCAAAT+AGG | 0.288891 | 1.1:+46932939 | MS.gene051385:CDS |
| GAATCTTCAGTATTCTTAAC+AGG | 0.331015 | 1.1:-46932872 | None:intergenic |
| GCTAATGCTTGTGAACGTTA+TGG | 0.342922 | 1.1:+46932983 | MS.gene051385:CDS |
| CTTAAGTCCACGGGTGAATC+AGG | 0.362636 | 1.1:-46933788 | None:intergenic |
| TCACTAAATATTGCCATTCC+AGG | 0.367773 | 1.1:-46932734 | None:intergenic |
| ATAGATTTCTCTGATTTGAT+TGG | 0.378631 | 1.1:+46932929 | MS.gene051385:CDS |
| TACTTACCTCTTTCCTCAAA+TGG | 0.387893 | 1.1:-46933635 | None:intergenic |
| CTGATTCACCCGTGGACTTA+AGG | 0.394075 | 1.1:+46933789 | MS.gene051385:CDS |
| GGCCAATGGGGAAGATAATC+AGG | 0.400544 | 1.1:-46933767 | None:intergenic |
| ATGAAAGCAGCAGTTCGATA+TGG | 0.408965 | 1.1:+46933671 | MS.gene051385:CDS |
| GTGAAGCAGCTAGTTGATAA+TGG | 0.414485 | 1.1:+46932803 | MS.gene051385:CDS |
| CACGGGTGAATCAGGCCAAT+GGG | 0.444035 | 1.1:-46933780 | None:intergenic |
| AAGCATTAGCTAATGATTGA+AGG | 0.468086 | 1.1:-46932970 | None:intergenic |
| TGCCTGATTATCTTCCCCAT+TGG | 0.469148 | 1.1:+46933765 | MS.gene051385:CDS |
| CAAATGACAAAGTGTTCTGT+TGG | 0.480434 | 1.1:+46933711 | MS.gene051385:CDS |
| ACATAACATGTCACCTGGAA+TGG | 0.496993 | 1.1:+46932721 | None:intergenic |
| GATCTTCCATTTGAGGAAAG+AGG | 0.501424 | 1.1:+46933629 | MS.gene051385:CDS |
| AAATCAGAGAAATCTATGAT+TGG | 0.515757 | 1.1:-46932923 | None:intergenic |
| TAACATCTTCTGAGATTCCA+TGG | 0.516143 | 1.1:-46933571 | None:intergenic |
| TATTTAGTGAAGATATCAAA+GGG | 0.526540 | 1.1:+46932747 | MS.gene051385:CDS |
| TGTCTAGTGGACAAGTTCTA+CGG | 0.531669 | 1.1:+46933967 | MS.gene051385:intron |
| ATAGAAAATCAATTTCTGAA+TGG | 0.536962 | 1.1:+46932779 | MS.gene051385:CDS |
| AATCTATGATTGGTAGCTGT+AGG | 0.551270 | 1.1:-46932913 | None:intergenic |
| GGACAAGTTCTACGGATAGT+TGG | 0.557043 | 1.1:+46933975 | MS.gene051385:CDS |
| TTCTTAACAGGACGTTCAGA+AGG | 0.564901 | 1.1:-46932860 | None:intergenic |
| CCACGGGTGAATCAGGCCAA+TGG | 0.566357 | 1.1:-46933781 | None:intergenic |
| GCTAATGATTGAAGGACTTG+AGG | 0.581912 | 1.1:-46932962 | None:intergenic |
| AAATACACACCTTAAGTCCA+CGG | 0.583362 | 1.1:-46933798 | None:intergenic |
| GAAGATAATCAGGCAAAGGA+TGG | 0.594394 | 1.1:-46933757 | None:intergenic |
| TATGAGGTATCCATTTACAA+TGG | 0.596103 | 1.1:-46933999 | None:intergenic |
| ATATTACATAACATGTCACC+TGG | 0.597647 | 1.1:+46932716 | None:intergenic |
| TTAACAGGACGTTCAGAAGG+AGG | 0.597751 | 1.1:-46932857 | None:intergenic |
| AGTTGATAATGGACTTCGTA+CGG | 0.603305 | 1.1:+46932814 | MS.gene051385:CDS |
| TTGATAAAGGTGGTAAACCA+TGG | 0.611151 | 1.1:+46933554 | MS.gene051385:intron |
| AATACACACCTTAAGTCCAC+GGG | 0.616230 | 1.1:-46933797 | None:intergenic |
| ATATTTAGTGAAGATATCAA+AGG | 0.617640 | 1.1:+46932746 | MS.gene051385:CDS |
| TGGGGAAGATAATCAGGCAA+AGG | 0.620881 | 1.1:-46933761 | None:intergenic |
| CCATTGGCCTGATTCACCCG+TGG | 0.623004 | 1.1:+46933781 | MS.gene051385:CDS |
| AACAACATGATGAATGTGTG+TGG | 0.670644 | 1.1:+46933596 | MS.gene051385:CDS |
| ACGGGTGAATCAGGCCAATG+GGG | 0.696556 | 1.1:-46933779 | None:intergenic |
| ATTTAGTGAAGATATCAAAG+GGG | 0.746024 | 1.1:+46932748 | MS.gene051385:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAACATATATTTTGGTA+AGG | - | chr1.1:46933055-46933074 | None:intergenic | 15.0% |
| !!! | TTTCTAATTGCATTTTTTTA+AGG | - | chr1.1:46933439-46933458 | None:intergenic | 15.0% |
| !! | ATAGAAAATCAATTTCTGAA+TGG | + | chr1.1:46932779-46932798 | MS.gene051385:CDS | 20.0% |
| !! | ATATTTAGTGAAGATATCAA+AGG | + | chr1.1:46932746-46932765 | MS.gene051385:CDS | 20.0% |
| !! | TATTTAGTGAAGATATCAAA+GGG | + | chr1.1:46932747-46932766 | MS.gene051385:CDS | 20.0% |
| !! | TGAAAAAAAATAAACTTGCA+TGG | - | chr1.1:46933213-46933232 | None:intergenic | 20.0% |
| !! | TTGCATTTAATTCCATAAAA+AGG | - | chr1.1:46933244-46933263 | None:intergenic | 20.0% |
| !!! | TGAGTTTTTTTTTTAGTTCT+TGG | - | chr1.1:46933271-46933290 | None:intergenic | 20.0% |
| !!! | TTAACTATAACTAAGTTTTG+TGG | - | chr1.1:46933031-46933050 | None:intergenic | 20.0% |
| !!! | TTTTGTGTTTTGATTGATAA+AGG | + | chr1.1:46933541-46933560 | MS.gene051385:intron | 20.0% |
| ! | AAATCAGAGAAATCTATGAT+TGG | - | chr1.1:46932926-46932945 | None:intergenic | 25.0% |
| ! | ATTTAGTGAAGATATCAAAG+GGG | + | chr1.1:46932748-46932767 | MS.gene051385:CDS | 25.0% |
| !! | AATTTGTAATTTGTCAGTAG+AGG | + | chr1.1:46933084-46933103 | MS.gene051385:intron | 25.0% |
| !! | ATAGATTTCTCTGATTTGAT+TGG | + | chr1.1:46932929-46932948 | MS.gene051385:CDS | 25.0% |
| !! | GAGTTCTAGTACTTATTTAT+TGG | + | chr1.1:46933911-46933930 | MS.gene051385:intron | 25.0% |
| !! | GTGTATTATAATTTGTCTAG+TGG | + | chr1.1:46933954-46933973 | MS.gene051385:intron | 25.0% |
| !!! | ATTTTTTGATCTTCCATTTG+AGG | + | chr1.1:46933622-46933641 | MS.gene051385:CDS | 25.0% |
| AAGCATTAGCTAATGATTGA+AGG | - | chr1.1:46932973-46932992 | None:intergenic | 30.0% | |
| GAATCTTCAGTATTCTTAAC+AGG | - | chr1.1:46932875-46932894 | None:intergenic | 30.0% | |
| TAATCAATTCAATCTCTACG+TGG | + | chr1.1:46933851-46933870 | MS.gene051385:intron | 30.0% | |
| ! | TTCAGTTTCAGTCCTTTTTA+TGG | + | chr1.1:46933229-46933248 | MS.gene051385:intron | 30.0% |
| !! | TTTTCTTTTTTTGCTAAGCC+AGG | - | chr1.1:46933177-46933196 | None:intergenic | 30.0% |
| !!! | TGTGTTTTGATTGATAAAGG+TGG | + | chr1.1:46933544-46933563 | MS.gene051385:intron | 30.0% |
| AAATACACACCTTAAGTCCA+CGG | - | chr1.1:46933801-46933820 | None:intergenic | 35.0% | |
| AACAACATGATGAATGTGTG+TGG | + | chr1.1:46933596-46933615 | MS.gene051385:CDS | 35.0% | |
| TACTTACCTCTTTCCTCAAA+TGG | - | chr1.1:46933638-46933657 | None:intergenic | 35.0% | |
| TCACTAAATATTGCCATTCC+AGG | - | chr1.1:46932737-46932756 | None:intergenic | 35.0% | |
| TTGATAAAGGTGGTAAACCA+TGG | + | chr1.1:46933554-46933573 | MS.gene051385:intron | 35.0% | |
| ! | AATCTATGATTGGTAGCTGT+AGG | - | chr1.1:46932916-46932935 | None:intergenic | 35.0% |
| ! | CAAATGACAAAGTGTTCTGT+TGG | + | chr1.1:46933711-46933730 | MS.gene051385:CDS | 35.0% |
| ! | CTGATTTGATTGGTCCAAAT+AGG | + | chr1.1:46932939-46932958 | MS.gene051385:CDS | 35.0% |
| ! | TGAACGTTATGGATTTTTCC+AGG | + | chr1.1:46932994-46933013 | MS.gene051385:CDS | 35.0% |
| !! | AGTTGATAATGGACTTCGTA+CGG | + | chr1.1:46932814-46932833 | MS.gene051385:CDS | 35.0% |
| !! | CGCAACATGCAGTATTTTTA+GGG | - | chr1.1:46933394-46933413 | None:intergenic | 35.0% |
| !! | TAACATCTTCTGAGATTCCA+TGG | - | chr1.1:46933574-46933593 | None:intergenic | 35.0% |
| !!! | GGAGGAAGTATGTACTTTTT+TGG | - | chr1.1:46932842-46932861 | None:intergenic | 35.0% |
| AATACACACCTTAAGTCCAC+GGG | - | chr1.1:46933800-46933819 | None:intergenic | 40.0% | |
| AGGAGAAAGGACAAATATCG+AGG | - | chr1.1:46933157-46933176 | None:intergenic | 40.0% | |
| ATGAAAGCAGCAGTTCGATA+TGG | + | chr1.1:46933671-46933690 | MS.gene051385:CDS | 40.0% | |
| GAAGATAATCAGGCAAAGGA+TGG | - | chr1.1:46933760-46933779 | None:intergenic | 40.0% | |
| GAGTCGTTGATATCCTAACT+AGG | - | chr1.1:46933133-46933152 | None:intergenic | 40.0% | |
| GATCTTCCATTTGAGGAAAG+AGG | + | chr1.1:46933629-46933648 | MS.gene051385:CDS | 40.0% | |
| GCTAATGATTGAAGGACTTG+AGG | - | chr1.1:46932965-46932984 | None:intergenic | 40.0% | |
| GCTAATGCTTGTGAACGTTA+TGG | + | chr1.1:46932983-46933002 | MS.gene051385:CDS | 40.0% | |
| TCGATATTTGTCCTTTCTCC+TGG | + | chr1.1:46933156-46933175 | MS.gene051385:intron | 40.0% | |
| TTCTTAACAGGACGTTCAGA+AGG | - | chr1.1:46932863-46932882 | None:intergenic | 40.0% | |
| ! | GCGCAACATGCAGTATTTTT+AGG | - | chr1.1:46933395-46933414 | None:intergenic | 40.0% |
| ! | TGTCTAGTGGACAAGTTCTA+CGG | + | chr1.1:46933967-46933986 | MS.gene051385:intron | 40.0% |
| ! | TTTTTGCTAAGCCAGGAGAA+AGG | - | chr1.1:46933170-46933189 | None:intergenic | 40.0% |
| !! | GTGAAGCAGCTAGTTGATAA+TGG | + | chr1.1:46932803-46932822 | MS.gene051385:CDS | 40.0% |
| !!! | TGGTAGCTGTAGGTTTTGTT+TGG | - | chr1.1:46932906-46932925 | None:intergenic | 40.0% |
| GGACAAGTTCTACGGATAGT+TGG | + | chr1.1:46933975-46933994 | MS.gene051385:CDS | 45.0% | |
| TGAAGGACTTGAGGCCTATT+TGG | - | chr1.1:46932956-46932975 | None:intergenic | 45.0% | |
| TGCCTGATTATCTTCCCCAT+TGG | + | chr1.1:46933765-46933784 | MS.gene051385:CDS | 45.0% | |
| TGGGGAAGATAATCAGGCAA+AGG | - | chr1.1:46933764-46933783 | None:intergenic | 45.0% | |
| TTAACAGGACGTTCAGAAGG+AGG | - | chr1.1:46932860-46932879 | None:intergenic | 45.0% | |
| TTTGTGGTTGATTGCTCACC+TGG | - | chr1.1:46933015-46933034 | None:intergenic | 45.0% | |
| !! | AGAGGATAGAAGTGTCTTCG+AGG | + | chr1.1:46933102-46933121 | MS.gene051385:intron | 45.0% |
| !! | TGTATAAATTAATAAAAATA+TGG | + | chr1.1:46933296-46933315 | MS.gene051385:intron | 5.0% |
| !!! | AATTAAATAAATTTTTTGTT+AGG | + | chr1.1:46933324-46933343 | MS.gene051385:intron | 5.0% |
| !!! | ATAATTTAAAACATATATTT+TGG | - | chr1.1:46933060-46933079 | None:intergenic | 5.0% |
| CTGATTCACCCGTGGACTTA+AGG | + | chr1.1:46933789-46933808 | MS.gene051385:CDS | 50.0% | |
| CTTAAGTCCACGGGTGAATC+AGG | - | chr1.1:46933791-46933810 | None:intergenic | 50.0% | |
| CTTCGAGGTGCAACCTAGTT+AGG | + | chr1.1:46933117-46933136 | MS.gene051385:intron | 50.0% | |
| GGCCAATGGGGAAGATAATC+AGG | - | chr1.1:46933770-46933789 | None:intergenic | 50.0% | |
| ACGGGTGAATCAGGCCAATG+GGG | - | chr1.1:46933782-46933801 | None:intergenic | 55.0% | |
| CACGGGTGAATCAGGCCAAT+GGG | - | chr1.1:46933783-46933802 | None:intergenic | 55.0% | |
| CCACGGGTGAATCAGGCCAA+TGG | - | chr1.1:46933784-46933803 | None:intergenic | 60.0% | |
| ! | CCATTGGCCTGATTCACCCG+TGG | + | chr1.1:46933781-46933800 | MS.gene051385:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 46932728 | 46934007 | 46932728 | ID=MS.gene051385 |
| chr1.1 | mRNA | 46932728 | 46934007 | 46932728 | ID=MS.gene051385.t1;Parent=MS.gene051385 |
| chr1.1 | exon | 46932728 | 46933015 | 46932728 | ID=MS.gene051385.t1.exon1;Parent=MS.gene051385.t1 |
| chr1.1 | CDS | 46932728 | 46933015 | 46932728 | ID=cds.MS.gene051385.t1;Parent=MS.gene051385.t1 |
| chr1.1 | exon | 46933563 | 46933810 | 46933563 | ID=MS.gene051385.t1.exon2;Parent=MS.gene051385.t1 |
| chr1.1 | CDS | 46933563 | 46933810 | 46933563 | ID=cds.MS.gene051385.t1;Parent=MS.gene051385.t1 |
| chr1.1 | exon | 46933974 | 46934007 | 46933974 | ID=MS.gene051385.t1.exon3;Parent=MS.gene051385.t1 |
| chr1.1 | CDS | 46933974 | 46934007 | 46933974 | ID=cds.MS.gene051385.t1;Parent=MS.gene051385.t1 |
| Gene Sequence |
| Protein sequence |
