Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059129.t1 | XP_003588551.1 | 98.2 | 385 | 7 | 0 | 1 | 385 | 1 | 385 | 1.70E-169 | 605.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059129.t1 | Q08298 | 60.5 | 392 | 146 | 6 | 1 | 384 | 1 | 391 | 1.9e-84 | 314.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059129.t1 | G7I4D4 | 98.2 | 385 | 7 | 0 | 1 | 385 | 1 | 385 | 1.2e-169 | 605.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene059129 | 0.800332 | 1.51E-48 | -1.69E-46 |
| MS.gene050375 | MS.gene059129 | 0.80382 | 2.90E-49 | -1.69E-46 |
| MS.gene050502 | MS.gene059129 | 0.819694 | 1.02E-52 | -1.69E-46 |
| MS.gene050520 | MS.gene059129 | 0.845153 | 4.85E-59 | -1.69E-46 |
| MS.gene051255 | MS.gene059129 | 0.834789 | 2.45E-56 | -1.69E-46 |
| MS.gene051509 | MS.gene059129 | 0.819333 | 1.23E-52 | -1.69E-46 |
| MS.gene051941 | MS.gene059129 | 0.828898 | 6.96E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene059129 | 0.804611 | 1.99E-49 | -1.69E-46 |
| MS.gene052999 | MS.gene059129 | 0.847881 | 8.73E-60 | -1.69E-46 |
| MS.gene053169 | MS.gene059129 | 0.813592 | 2.37E-51 | -1.69E-46 |
| MS.gene053318 | MS.gene059129 | 0.806112 | 9.64E-50 | -1.69E-46 |
| MS.gene053889 | MS.gene059129 | 0.805551 | 1.26E-49 | -1.69E-46 |
| MS.gene05492 | MS.gene059129 | 0.816271 | 6.03E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene059129 | 0.809858 | 1.54E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene059129 | 0.800286 | 1.55E-48 | -1.69E-46 |
| MS.gene056422 | MS.gene059129 | 0.820652 | 6.12E-53 | -1.69E-46 |
| MS.gene057019 | MS.gene059129 | 0.81833 | 2.07E-52 | -1.69E-46 |
| MS.gene057086 | MS.gene059129 | 0.805877 | 1.08E-49 | -1.69E-46 |
| MS.gene058459 | MS.gene059129 | 0.801472 | 8.86E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene059129 | 0.800162 | 1.64E-48 | -1.69E-46 |
| MS.gene059129 | MS.gene059674 | 0.803603 | 3.22E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene059680 | 0.839775 | 1.30E-57 | -1.69E-46 |
| MS.gene059129 | MS.gene059711 | 0.807875 | 4.08E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene059974 | 0.816302 | 5.93E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene060372 | 0.813563 | 2.40E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene060837 | 0.830821 | 2.37E-55 | -1.69E-46 |
| MS.gene059129 | MS.gene063518 | 0.825196 | 5.35E-54 | -1.69E-46 |
| MS.gene059129 | MS.gene06475 | 0.80722 | 5.62E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene065130 | 0.833483 | 5.20E-56 | -1.69E-46 |
| MS.gene059129 | MS.gene065204 | 0.810856 | 9.36E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene065844 | 0.804417 | 2.18E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene066001 | 0.818945 | 1.50E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene066634 | 0.806908 | 6.54E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene06751 | 0.839331 | 1.69E-57 | -1.69E-46 |
| MS.gene059129 | MS.gene06752 | 0.808573 | 2.90E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene068509 | 0.890859 | 6.73E-74 | -1.69E-46 |
| MS.gene059129 | MS.gene068880 | 0.812526 | 4.06E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene068884 | 0.807601 | 4.67E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene070999 | 0.827799 | 1.28E-54 | -1.69E-46 |
| MS.gene059129 | MS.gene073243 | 0.881808 | 1.76E-70 | -1.69E-46 |
| MS.gene059129 | MS.gene074333 | 0.826817 | 2.20E-54 | -1.69E-46 |
| MS.gene059129 | MS.gene08253 | 0.813917 | 2.01E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene08254 | 0.81855 | 1.85E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene09053 | 0.804692 | 1.91E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene09261 | 0.800883 | 1.17E-48 | -1.69E-46 |
| MS.gene059129 | MS.gene09663 | 0.823496 | 1.34E-53 | -1.69E-46 |
| MS.gene059129 | MS.gene20220 | 0.809141 | 2.19E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene20267 | 0.812639 | 3.83E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene21005 | 0.846505 | 2.08E-59 | -1.69E-46 |
| MS.gene059129 | MS.gene21477 | 0.828058 | 1.11E-54 | -1.69E-46 |
| MS.gene059129 | MS.gene21731 | 0.81075 | 9.87E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene21892 | 0.803434 | 3.49E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene22673 | 0.887852 | 9.92E-73 | -1.69E-46 |
| MS.gene059129 | MS.gene22902 | 0.820712 | 5.94E-53 | -1.69E-46 |
| MS.gene059129 | MS.gene24611 | 0.805846 | 1.10E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene26654 | 0.805681 | 1.19E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene27584 | 0.805474 | 1.31E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene28105 | 0.861725 | 8.39E-64 | -1.69E-46 |
| MS.gene059129 | MS.gene28132 | 0.80647 | 8.10E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene28299 | 0.873459 | 1.45E-67 | -1.69E-46 |
| MS.gene059129 | MS.gene28990 | 0.800882 | 1.17E-48 | -1.69E-46 |
| MS.gene059129 | MS.gene30150 | 0.803897 | 2.80E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene31309 | 0.822862 | 1.89E-53 | -1.69E-46 |
| MS.gene059129 | MS.gene31610 | 0.885942 | 5.26E-72 | -1.69E-46 |
| MS.gene059129 | MS.gene33309 | 0.80411 | 2.53E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene34137 | 0.806112 | 9.64E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene36036 | 0.808225 | 3.44E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene37919 | 0.835827 | 1.34E-56 | -1.69E-46 |
| MS.gene059129 | MS.gene38024 | 0.814628 | 1.40E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene38232 | 0.809063 | 2.28E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene39339 | 0.832317 | 1.01E-55 | -1.69E-46 |
| MS.gene059129 | MS.gene42824 | 0.807629 | 4.61E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene44526 | 0.824185 | 9.26E-54 | -1.69E-46 |
| MS.gene059129 | MS.gene45438 | 0.830328 | 3.12E-55 | -1.69E-46 |
| MS.gene059129 | MS.gene48285 | 0.832818 | 7.61E-56 | -1.69E-46 |
| MS.gene059129 | MS.gene48287 | 0.823354 | 1.45E-53 | -1.69E-46 |
| MS.gene059129 | MS.gene48392 | 0.815428 | 9.29E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene48401 | 0.822598 | 2.17E-53 | -1.69E-46 |
| MS.gene059129 | MS.gene48646 | 0.808289 | 3.33E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene48648 | 0.804547 | 2.05E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene48649 | 0.801045 | 1.08E-48 | -1.69E-46 |
| MS.gene059129 | MS.gene48797 | 0.828779 | 7.43E-55 | -1.69E-46 |
| MS.gene059129 | MS.gene49722 | 0.814189 | 1.75E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene49929 | 0.808604 | 2.85E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene51032 | 0.82903 | 6.46E-55 | -1.69E-46 |
| MS.gene059129 | MS.gene51786 | 0.80672 | 7.17E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene55820 | 0.82301 | 1.74E-53 | -1.69E-46 |
| MS.gene059129 | MS.gene56052 | 0.884921 | 1.27E-71 | -1.69E-46 |
| MS.gene059129 | MS.gene56776 | 0.815647 | 8.30E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene57264 | 0.817706 | 2.87E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene57694 | 0.827286 | 1.70E-54 | -1.69E-46 |
| MS.gene059129 | MS.gene58124 | 0.833151 | 6.29E-56 | -1.69E-46 |
| MS.gene059129 | MS.gene59687 | 0.83792 | 3.91E-57 | -1.69E-46 |
| MS.gene059129 | MS.gene60353 | 0.816833 | 4.51E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene61068 | 0.820707 | 5.95E-53 | -1.69E-46 |
| MS.gene059129 | MS.gene61160 | 0.831074 | 2.05E-55 | -1.69E-46 |
| MS.gene059129 | MS.gene62087 | 0.836981 | 6.80E-57 | -1.69E-46 |
| MS.gene059129 | MS.gene62091 | 0.812781 | 3.57E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene63452 | 0.813864 | 2.06E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene67279 | 0.822613 | 2.16E-53 | -1.69E-46 |
| MS.gene059129 | MS.gene70167 | 0.848438 | 6.13E-60 | -1.69E-46 |
| MS.gene059129 | MS.gene70270 | 0.820714 | 5.93E-53 | -1.69E-46 |
| MS.gene059129 | MS.gene70333 | 0.803207 | 3.89E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene70359 | 0.868715 | 5.31E-66 | -1.69E-46 |
| MS.gene059129 | MS.gene71665 | 0.805936 | 1.05E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene71836 | 0.831827 | 1.34E-55 | -1.69E-46 |
| MS.gene059129 | MS.gene71861 | 0.811544 | 6.64E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene71904 | -0.81881 | 1.61E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene73339 | 0.817047 | 4.04E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene73375 | 0.800234 | 1.59E-48 | -1.69E-46 |
| MS.gene059129 | MS.gene73665 | 0.852647 | 4.02E-61 | -1.69E-46 |
| MS.gene059129 | MS.gene73909 | 0.817855 | 2.66E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene75432 | 0.819295 | 1.25E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene75681 | 0.842873 | 1.98E-58 | -1.69E-46 |
| MS.gene059129 | MS.gene76027 | 0.800448 | 1.43E-48 | -1.69E-46 |
| MS.gene059129 | MS.gene76141 | 0.825263 | 5.16E-54 | -1.69E-46 |
| MS.gene059129 | MS.gene76300 | 0.843436 | 1.40E-58 | -1.69E-46 |
| MS.gene059129 | MS.gene76557 | 0.807459 | 5.00E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene76710 | 0.802074 | 6.66E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene76745 | 0.824487 | 7.86E-54 | -1.69E-46 |
| MS.gene059129 | MS.gene77025 | 0.815971 | 7.03E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene77521 | 0.844408 | 7.70E-59 | -1.69E-46 |
| MS.gene059129 | MS.gene78738 | 0.817898 | 2.60E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene79883 | 0.835467 | 1.65E-56 | -1.69E-46 |
| MS.gene059129 | MS.gene81988 | 0.814151 | 1.78E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene83251 | 0.805709 | 1.17E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene84140 | 0.833562 | 4.97E-56 | -1.69E-46 |
| MS.gene059129 | MS.gene84397 | 0.802003 | 6.90E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene85212 | 0.826383 | 2.80E-54 | -1.69E-46 |
| MS.gene059129 | MS.gene85983 | 0.802982 | 4.33E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene86102 | 0.836102 | 1.14E-56 | -1.69E-46 |
| MS.gene059129 | MS.gene87577 | 0.807756 | 4.33E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene87888 | 0.803094 | 4.11E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene88640 | 0.801763 | 7.72E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene90462 | 0.807107 | 5.94E-50 | -1.69E-46 |
| MS.gene059129 | MS.gene90512 | 0.820297 | 7.39E-53 | -1.69E-46 |
| MS.gene059129 | MS.gene90538 | 0.800501 | 1.40E-48 | -1.69E-46 |
| MS.gene059129 | MS.gene91156 | 0.803165 | 3.97E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene92239 | 0.804644 | 1.96E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene93043 | 0.840554 | 8.11E-58 | -1.69E-46 |
| MS.gene059129 | MS.gene93095 | 0.819692 | 1.02E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene93096 | 0.815624 | 8.41E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene94034 | 0.812989 | 3.21E-51 | -1.69E-46 |
| MS.gene059129 | MS.gene95715 | 0.856733 | 2.64E-62 | -1.69E-46 |
| MS.gene059129 | MS.gene99197 | 0.80486 | 1.76E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059129.t1 | MTR_1g008500 | 97.922 | 385 | 8 | 0 | 1 | 385 | 1 | 385 | 0.0 | 769 |
| MS.gene059129.t1 | MTR_0312s0030 | 62.468 | 389 | 78 | 7 | 1 | 385 | 1 | 325 | 2.26e-160 | 453 |
| MS.gene059129.t1 | MTR_1g007520 | 62.468 | 389 | 78 | 7 | 1 | 385 | 1 | 325 | 2.26e-160 | 453 |
| MS.gene059129.t1 | MTR_1g008510 | 61.026 | 390 | 83 | 6 | 1 | 385 | 1 | 326 | 3.88e-154 | 437 |
| MS.gene059129.t1 | MTR_1g008590 | 62.468 | 389 | 78 | 7 | 1 | 385 | 1 | 325 | 1.54e-153 | 436 |
| MS.gene059129.t1 | MTR_1g008560 | 58.228 | 395 | 90 | 6 | 1 | 385 | 1 | 330 | 1.31e-148 | 424 |
| MS.gene059129.t1 | MTR_1g008450 | 58.290 | 386 | 87 | 9 | 1 | 385 | 1 | 313 | 5.99e-141 | 404 |
| MS.gene059129.t1 | MTR_3g109490 | 51.295 | 386 | 119 | 5 | 1 | 383 | 1 | 320 | 4.35e-133 | 384 |
| MS.gene059129.t1 | MTR_1g008530 | 78.995 | 219 | 45 | 1 | 168 | 385 | 6 | 224 | 1.74e-126 | 363 |
| MS.gene059129.t1 | MTR_1g008470 | 68.657 | 268 | 66 | 4 | 118 | 385 | 51 | 300 | 7.35e-125 | 362 |
| MS.gene059129.t1 | MTR_1g008470 | 75.000 | 64 | 13 | 1 | 1 | 64 | 1 | 61 | 1.21e-22 | 97.4 |
| MS.gene059129.t1 | MTR_1g008460 | 65.779 | 263 | 72 | 5 | 126 | 385 | 50 | 297 | 7.12e-116 | 339 |
| MS.gene059129.t1 | MTR_1g008460 | 76.190 | 63 | 12 | 1 | 1 | 63 | 1 | 60 | 5.43e-23 | 98.2 |
| MS.gene059129.t1 | MTR_1g008580 | 82.456 | 171 | 30 | 0 | 214 | 384 | 1 | 171 | 1.08e-102 | 301 |
| MS.gene059129.t1 | MTR_4g069680 | 43.304 | 224 | 122 | 4 | 166 | 385 | 65 | 287 | 1.30e-60 | 197 |
| MS.gene059129.t1 | MTR_3g107830 | 43.750 | 224 | 121 | 3 | 166 | 385 | 34 | 256 | 1.21e-59 | 194 |
| MS.gene059129.t1 | MTR_3g116410 | 43.304 | 224 | 122 | 4 | 166 | 385 | 54 | 276 | 2.20e-58 | 191 |
| MS.gene059129.t1 | MTR_3g116380 | 43.694 | 222 | 119 | 4 | 166 | 383 | 82 | 301 | 5.61e-58 | 191 |
| MS.gene059129.t1 | MTR_1g008420 | 49.561 | 228 | 69 | 10 | 14 | 237 | 14 | 199 | 8.24e-48 | 162 |
| MS.gene059129.t1 | MTR_3g116320 | 41.284 | 218 | 118 | 5 | 171 | 383 | 474 | 686 | 1.41e-46 | 169 |
| MS.gene059129.t1 | MTR_3g116270 | 39.171 | 217 | 124 | 5 | 171 | 383 | 292 | 504 | 7.67e-46 | 164 |
| MS.gene059129.t1 | MTR_4g069570 | 37.443 | 219 | 127 | 6 | 171 | 383 | 120 | 334 | 9.03e-45 | 157 |
| MS.gene059129.t1 | MTR_4g069040 | 36.287 | 237 | 140 | 7 | 153 | 383 | 277 | 508 | 1.00e-43 | 159 |
| MS.gene059129.t1 | MTR_4g069550 | 37.443 | 219 | 127 | 6 | 171 | 383 | 247 | 461 | 1.18e-41 | 152 |
| MS.gene059129.t1 | MTR_4g069520 | 36.986 | 219 | 128 | 6 | 171 | 383 | 507 | 721 | 9.36e-40 | 150 |
| MS.gene059129.t1 | MTR_8g064500 | 36.530 | 219 | 129 | 5 | 171 | 384 | 159 | 372 | 1.20e-39 | 145 |
| MS.gene059129.t1 | MTR_4g069520 | 36.986 | 219 | 128 | 6 | 171 | 383 | 493 | 707 | 1.28e-39 | 150 |
| MS.gene059129.t1 | MTR_8g064560 | 35.616 | 219 | 131 | 5 | 171 | 384 | 412 | 625 | 4.07e-36 | 139 |
| MS.gene059129.t1 | MTR_8g064530 | 35.160 | 219 | 132 | 6 | 171 | 384 | 429 | 642 | 2.82e-34 | 134 |
| MS.gene059129.t1 | MTR_5g034320 | 33.641 | 217 | 136 | 5 | 171 | 383 | 415 | 627 | 5.01e-34 | 133 |
| MS.gene059129.t1 | MTR_8g445170 | 41.333 | 150 | 81 | 3 | 234 | 383 | 240 | 382 | 5.10e-33 | 127 |
| MS.gene059129.t1 | MTR_8g046000 | 36.818 | 220 | 105 | 8 | 170 | 383 | 30 | 221 | 6.05e-33 | 123 |
| MS.gene059129.t1 | MTR_3g078090 | 37.173 | 191 | 113 | 4 | 198 | 384 | 439 | 626 | 1.20e-32 | 129 |
| MS.gene059129.t1 | MTR_8g445140 | 40.506 | 158 | 84 | 4 | 226 | 383 | 154 | 301 | 1.36e-32 | 124 |
| MS.gene059129.t1 | MTR_6g086530 | 33.333 | 195 | 122 | 6 | 198 | 385 | 13 | 206 | 2.07e-32 | 121 |
| MS.gene059129.t1 | MTR_2g081610 | 33.953 | 215 | 111 | 6 | 171 | 383 | 73 | 258 | 3.92e-32 | 122 |
| MS.gene059129.t1 | MTR_8g045890 | 45.985 | 137 | 67 | 4 | 247 | 383 | 301 | 430 | 4.44e-31 | 123 |
| MS.gene059129.t1 | MTR_8g045890 | 45.255 | 137 | 68 | 4 | 247 | 383 | 342 | 471 | 8.31e-31 | 123 |
| MS.gene059129.t1 | MTR_8g045890 | 44.444 | 144 | 73 | 4 | 240 | 383 | 372 | 508 | 1.00e-30 | 123 |
| MS.gene059129.t1 | MTR_8g045880 | 43.151 | 146 | 76 | 3 | 238 | 383 | 175 | 313 | 1.56e-30 | 119 |
| MS.gene059129.t1 | MTR_8g045880 | 43.151 | 146 | 76 | 3 | 238 | 383 | 210 | 348 | 2.35e-30 | 119 |
| MS.gene059129.t1 | MTR_8g045880 | 43.151 | 146 | 76 | 3 | 238 | 383 | 212 | 350 | 3.49e-30 | 119 |
| MS.gene059129.t1 | MTR_4g133840 | 34.043 | 188 | 105 | 4 | 198 | 382 | 15 | 186 | 8.37e-30 | 114 |
| MS.gene059129.t1 | MTR_2g081590 | 33.333 | 225 | 121 | 7 | 160 | 383 | 62 | 258 | 1.13e-29 | 115 |
| MS.gene059129.t1 | MTR_2g081770 | 33.023 | 215 | 118 | 6 | 171 | 383 | 79 | 269 | 1.29e-29 | 115 |
| MS.gene059129.t1 | MTR_5g033340 | 30.942 | 223 | 140 | 6 | 169 | 384 | 164 | 379 | 3.79e-26 | 108 |
| MS.gene059129.t1 | MTR_5g033340 | 31.613 | 155 | 99 | 4 | 216 | 366 | 2 | 153 | 7.85e-15 | 75.9 |
| MS.gene059129.t1 | MTR_1g045860 | 34.101 | 217 | 112 | 10 | 171 | 383 | 69 | 258 | 1.36e-25 | 104 |
| MS.gene059129.t1 | MTR_5g033350 | 31.250 | 192 | 125 | 4 | 197 | 384 | 12 | 200 | 1.34e-24 | 100 |
| MS.gene059129.t1 | MTR_8g044290 | 46.364 | 110 | 53 | 3 | 240 | 349 | 229 | 332 | 1.35e-23 | 102 |
| MS.gene059129.t1 | MTR_5g033330 | 30.317 | 221 | 140 | 6 | 169 | 382 | 403 | 616 | 7.33e-23 | 100 |
| MS.gene059129.t1 | MTR_5g033330 | 30.732 | 205 | 128 | 6 | 169 | 366 | 195 | 392 | 1.29e-19 | 90.9 |
| MS.gene059129.t1 | MTR_5g033330 | 31.034 | 174 | 113 | 4 | 197 | 366 | 14 | 184 | 8.50e-17 | 82.4 |
| MS.gene059129.t1 | MTR_4g068420 | 35.294 | 136 | 68 | 5 | 251 | 383 | 1 | 119 | 4.03e-20 | 85.9 |
| MS.gene059129.t1 | MTR_5g033360 | 28.311 | 219 | 133 | 6 | 169 | 384 | 25 | 222 | 9.77e-20 | 87.4 |
| MS.gene059129.t1 | MTR_8g075930 | 41.772 | 79 | 42 | 2 | 298 | 373 | 10 | 87 | 1.35e-17 | 77.4 |
| MS.gene059129.t1 | MTR_5g033430 | 34.831 | 89 | 52 | 3 | 300 | 384 | 24 | 110 | 1.97e-13 | 67.0 |
| MS.gene059129.t1 | MTR_5g033440 | 32.184 | 87 | 57 | 2 | 300 | 384 | 24 | 110 | 2.87e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059129.t1 | AT5G25610 | 49.880 | 417 | 150 | 10 | 1 | 384 | 1 | 391 | 1.85e-119 | 352 |
| MS.gene059129.t1 | AT1G49320 | 38.528 | 231 | 132 | 5 | 164 | 385 | 51 | 280 | 1.87e-49 | 168 |
| MS.gene059129.t1 | AT1G60390 | 35.321 | 218 | 129 | 6 | 171 | 382 | 409 | 620 | 2.79e-34 | 134 |
| MS.gene059129.t1 | AT1G70370 | 35.023 | 217 | 133 | 4 | 171 | 383 | 411 | 623 | 5.55e-34 | 133 |
| MS.gene059129.t1 | AT1G70370 | 35.023 | 217 | 133 | 4 | 171 | 383 | 411 | 623 | 5.55e-34 | 133 |
| MS.gene059129.t1 | AT1G23760 | 33.641 | 217 | 136 | 5 | 171 | 383 | 407 | 619 | 4.12e-32 | 128 |
Find 70 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTGTTCCTTCCTTGA+TGG | 0.248730 | 1.2:+11279185 | None:intergenic |
| ATTGAATTAGCAACTTCTTT+AGG | 0.259477 | 1.2:+11279252 | None:intergenic |
| TCAACTTTGCTTGAAGAAAA+AGG | 0.265366 | 1.2:+11279228 | None:intergenic |
| TTCCACAAGATCATGTTGTT+TGG | 0.285326 | 1.2:-11278726 | MS.gene059129:CDS |
| TTGGACTTCCAGTACACTTC+AGG | 0.301847 | 1.2:+11281639 | None:intergenic |
| TCCACAAGATCATGTTGTTT+GGG | 0.303403 | 1.2:-11278725 | MS.gene059129:CDS |
| ACTTGAAAAGCCAAATGTTT+AGG | 0.303666 | 1.2:+11278790 | None:intergenic |
| CATTTGAGTTGTGGGAAGTT+TGG | 0.322640 | 1.2:+11281620 | None:intergenic |
| GGCAAAAGGAGTGAAGAAAT+TGG | 0.329950 | 1.2:-11278980 | MS.gene059129:CDS |
| AGGAGATCAGTGATGGCTTT+TGG | 0.342434 | 1.2:+11281597 | None:intergenic |
| GTGCCTTTGGAAGGTGTTGA+TGG | 0.355685 | 1.2:-11278865 | MS.gene059129:CDS |
| ATAAGTGAGTGTGAAGAAAA+TGG | 0.356965 | 1.2:-11279141 | MS.gene059129:CDS |
| AAGAAGAAAAGTGCTACATT+TGG | 0.370145 | 1.2:+11279354 | None:intergenic |
| TAAAGTTTACTCTGTGCCTT+TGG | 0.379443 | 1.2:-11278878 | MS.gene059129:CDS |
| TGACAAACTGGAACAGTTCC+AGG | 0.395778 | 1.2:+11278754 | None:intergenic |
| ACAATGGAATCCTAAACATT+TGG | 0.401609 | 1.2:-11278800 | MS.gene059129:CDS |
| AAAGCTTTGTGTGACATCAT+TGG | 0.404983 | 1.2:-11279103 | MS.gene059129:CDS |
| GGAGGTGTGAATGTTGATTC+CGG | 0.428495 | 1.2:-11279663 | MS.gene059129:CDS |
| CAAGAATATGTAATGGCAAA+AGG | 0.436844 | 1.2:-11278994 | MS.gene059129:CDS |
| TACATTGAGTATGATAAAGA+TGG | 0.440841 | 1.2:+11281804 | None:intergenic |
| TTAGAAAAGGATTTGCATCA+AGG | 0.448118 | 1.2:-11279333 | MS.gene059129:CDS |
| TGTGGAAGGAAGTGACAAAC+TGG | 0.450964 | 1.2:+11278742 | None:intergenic |
| ATCACTGATCTCCTTCATCT+TGG | 0.451925 | 1.2:-11281588 | MS.gene059129:intron |
| GCAAAAGGAGTGAAGAAATT+GGG | 0.456863 | 1.2:-11278979 | MS.gene059129:CDS |
| GATTTCACTACTTCGAAACT+TGG | 0.458312 | 1.2:-11279069 | MS.gene059129:CDS |
| GTCAATGTTCATGCAGGAAA+AGG | 0.459109 | 1.2:-11279465 | MS.gene059129:CDS |
| ACATTCACTGAGGTTCCTCC+TGG | 0.460070 | 1.2:+11279630 | None:intergenic |
| TGTGACATCATTGGAATCAA+TGG | 0.466709 | 1.2:-11279094 | MS.gene059129:CDS |
| ACATTCACTGCTGTTCCACC+TGG | 0.477807 | 1.2:+11279567 | None:intergenic |
| CAAGTGCTCAATGTTCAACC+TGG | 0.478030 | 1.2:-11278772 | MS.gene059129:CDS |
| TTTCCAACTGAAACATGTAC+TGG | 0.492608 | 1.2:+11279432 | None:intergenic |
| TTAACTGCTGTTCCACCACC+TGG | 0.493188 | 1.2:+11279504 | None:intergenic |
| TGGACTTCCAGTACACTTCA+GGG | 0.497027 | 1.2:+11281640 | None:intergenic |
| TGTGAAGAAAATGGTATCAA+AGG | 0.502134 | 1.2:-11279132 | MS.gene059129:CDS |
| CCTTGATGGAGAATATGTTA+AGG | 0.502688 | 1.2:+11279199 | None:intergenic |
| GGTGGAGTCCATGTTGATGC+AGG | 0.515104 | 1.2:-11279600 | MS.gene059129:CDS |
| GTTTACTCTGTGCCTTTGGA+AGG | 0.519063 | 1.2:-11278874 | MS.gene059129:CDS |
| ACATCAGTAGATGTAGGAAA+AGG | 0.519485 | 1.2:-11279684 | MS.gene059129:CDS |
| GTTCATGTAAATGCAGGTAA+AGG | 0.521792 | 1.2:-11279531 | MS.gene059129:CDS |
| AAAGGAACATCAGTAGATGT+AGG | 0.527977 | 1.2:-11279690 | MS.gene059129:CDS |
| ACCTCAGTGAATGTTGGAAA+AGG | 0.535317 | 1.2:-11279621 | MS.gene059129:CDS |
| GGTGGAACAGCAGTGAATGT+TGG | 0.538800 | 1.2:-11279564 | MS.gene059129:CDS |
| GTTCATGCAGGAAAAGGAAG+AGG | 0.544075 | 1.2:-11279459 | MS.gene059129:CDS |
| ACAGCAGTTAATGTTGGAAA+AGG | 0.545041 | 1.2:-11279492 | MS.gene059129:CDS |
| TCAGTGAATGTTGGAAAAGG+TGG | 0.545979 | 1.2:-11279618 | MS.gene059129:CDS |
| AAACCAGTACATGTTTCAGT+TGG | 0.548855 | 1.2:-11279435 | MS.gene059129:CDS |
| GGTGGAGTTCATGTAAATGC+AGG | 0.553242 | 1.2:-11279537 | MS.gene059129:CDS |
| GCAGTTAATGTTGGAAAAGG+TGG | 0.564699 | 1.2:-11279489 | MS.gene059129:CDS |
| GGAGGAACCTCAGTGAATGT+TGG | 0.568767 | 1.2:-11279627 | MS.gene059129:CDS |
| ATATGTACTAACCAAGATGA+AGG | 0.569351 | 1.2:+11281577 | None:intergenic |
| GGTGGAACAGCAGTTAATGT+TGG | 0.569822 | 1.2:-11279498 | MS.gene059129:CDS |
| ACCCAAACAACATGATCTTG+TGG | 0.570160 | 1.2:+11278724 | None:intergenic |
| GCAGTGAATGTTGGAAAAGG+TGG | 0.574359 | 1.2:-11279555 | MS.gene059129:CDS |
| CCTTAACATATTCTCCATCA+AGG | 0.579046 | 1.2:-11279199 | MS.gene059129:CDS |
| GGTGGTGTCAATGTTCATGC+AGG | 0.582435 | 1.2:-11279471 | MS.gene059129:CDS |
| TGACTTGCAAGAATATGTAA+TGG | 0.583650 | 1.2:-11279001 | MS.gene059129:CDS |
| AACATATTCTCCATCAAGGA+AGG | 0.583838 | 1.2:-11279195 | MS.gene059129:CDS |
| GACTTCCAGTACACTTCAGG+GGG | 0.602058 | 1.2:+11281642 | None:intergenic |
| GGTAAAGGAAAACCAGGTGG+TGG | 0.607966 | 1.2:-11279516 | MS.gene059129:CDS |
| ACAGCAGTGAATGTTGGAAA+AGG | 0.617678 | 1.2:-11279558 | MS.gene059129:CDS |
| TCAGTAGATGTAGGAAAAGG+AGG | 0.618497 | 1.2:-11279681 | MS.gene059129:CDS |
| GTAGATTGGACAGAAGAGAA+AGG | 0.619254 | 1.2:-11279708 | MS.gene059129:intron |
| AAACAACATGATCTTGTGGA+AGG | 0.620888 | 1.2:+11278728 | None:intergenic |
| GGACTTCCAGTACACTTCAG+GGG | 0.632263 | 1.2:+11281641 | None:intergenic |
| AAGATGAAGGAGATCAGTGA+TGG | 0.634746 | 1.2:+11281590 | None:intergenic |
| AGAAAATGGTATCAAAGGAG+AGG | 0.637281 | 1.2:-11279127 | MS.gene059129:CDS |
| AATGCAGGTAAAGGAAAACC+AGG | 0.656269 | 1.2:-11279522 | MS.gene059129:CDS |
| CTTCCATCAACACCTTCCAA+AGG | 0.662188 | 1.2:+11278862 | None:intergenic |
| GTCACACTGATACATCACAA+TGG | 0.706112 | 1.2:-11278816 | MS.gene059129:CDS |
| GCAGGTAAAGGAAAACCAGG+TGG | 0.762633 | 1.2:-11279519 | MS.gene059129:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAAAATTTCGATATTT+AGG | + | chr1.2:11279665-11279684 | None:intergenic | 10.0% |
| !!! | TTTGAAAATTTTCAAAAAAA+TGG | - | chr1.2:11280644-11280663 | MS.gene059129:intron | 10.0% |
| !!! | TTTTATTAAATAAAATGAAC+GGG | - | chr1.2:11279676-11279695 | MS.gene059129:CDS | 10.0% |
| !! | ATAGTATATATAGTTATGAA+TGG | - | chr1.2:11278990-11279009 | MS.gene059129:CDS | 15.0% |
| !! | ATATCATCATATATAAAGAT+TGG | - | chr1.2:11279749-11279768 | MS.gene059129:intron | 15.0% |
| !! | ATTTATAAAGTAACATTGAT+AGG | - | chr1.2:11279519-11279538 | MS.gene059129:CDS | 15.0% |
| !! | TAAAAAGGAACTAAAATATT+AGG | + | chr1.2:11278790-11278809 | None:intergenic | 15.0% |
| !! | TTAGGAGATAATATATAAAT+AGG | - | chr1.2:11279290-11279309 | MS.gene059129:CDS | 15.0% |
| !!! | AAAAACATAATCTTTTTGAA+CGG | + | chr1.2:11280473-11280492 | None:intergenic | 15.0% |
| !!! | ATTGGTTTGTAATAAAAAAT+CGG | + | chr1.2:11280441-11280460 | None:intergenic | 15.0% |
| !!! | TCATTTCTTTTCTTATTATA+TGG | - | chr1.2:11280227-11280246 | MS.gene059129:intron | 15.0% |
| !!! | TTCTTCTAAAAATAACTTAT+TGG | + | chr1.2:11280137-11280156 | None:intergenic | 15.0% |
| !! | AAAAAGAGTAATAAGGTTTA+TGG | + | chr1.2:11279787-11279806 | None:intergenic | 20.0% |
| !! | AAAAAGGAAAAAGAGTAATA+AGG | + | chr1.2:11279794-11279813 | None:intergenic | 20.0% |
| !! | ACAAATTCTTCATAATGATA+AGG | + | chr1.2:11279271-11279290 | None:intergenic | 20.0% |
| !! | AGAACAAACAAAATGATTTA+TGG | - | chr1.2:11280102-11280121 | MS.gene059129:intron | 20.0% |
| !! | AGTAGTTAGAAATTTATCAT+AGG | - | chr1.2:11279357-11279376 | MS.gene059129:CDS | 20.0% |
| !! | ATATATATGAATGTGTAGAT+TGG | - | chr1.2:11280815-11280834 | MS.gene059129:intron | 20.0% |
| !! | CAAACTAATGAAATTTGATT+CGG | - | chr1.2:11280750-11280769 | MS.gene059129:intron | 20.0% |
| !!! | AAAACATAATCTTTTTGAAC+GGG | + | chr1.2:11280472-11280491 | None:intergenic | 20.0% |
| !!! | AAACTTGAGAAAATTTTCAA+TGG | + | chr1.2:11279873-11279892 | None:intergenic | 20.0% |
| !!! | AAGTAGTTGTTGTATTTTAA+TGG | + | chr1.2:11279915-11279934 | None:intergenic | 20.0% |
| !!! | ATCATTATGAAGAATTTGTT+AGG | - | chr1.2:11279272-11279291 | MS.gene059129:CDS | 20.0% |
| !!! | CATTTTTTGCAATCAAATTT+AGG | + | chr1.2:11279162-11279181 | None:intergenic | 20.0% |
| ! | ATAATTCCACATATTAAGAC+TGG | + | chr1.2:11279723-11279742 | None:intergenic | 25.0% |
| ! | ATTGAATTAGCAACTTCTTT+AGG | + | chr1.2:11281288-11281307 | None:intergenic | 25.0% |
| ! | CGAATCAAATTTCATTAGTT+TGG | + | chr1.2:11280752-11280771 | None:intergenic | 25.0% |
| ! | GGAACCAAAATAACAAAAAT+AGG | + | chr1.2:11279036-11279055 | None:intergenic | 25.0% |
| ! | GGAATACAATGTTTAAACTT+TGG | - | chr1.2:11279391-11279410 | MS.gene059129:CDS | 25.0% |
| ! | TACATTGAGTATGATAAAGA+TGG | + | chr1.2:11278736-11278755 | None:intergenic | 25.0% |
| ! | TATAAAGTAACATTGATAGG+TGG | - | chr1.2:11279522-11279541 | MS.gene059129:CDS | 25.0% |
| ! | TATTGAATGACTTATGAGAT+AGG | - | chr1.2:11279082-11279101 | MS.gene059129:CDS | 25.0% |
| ! | TGGATTAAAAAAATACGACT+TGG | + | chr1.2:11280368-11280387 | None:intergenic | 25.0% |
| ! | TTATCATAGGTGAATAAGTA+AGG | - | chr1.2:11279370-11279389 | MS.gene059129:CDS | 25.0% |
| ! | TTATTACAAACCAATGAACT+CGG | - | chr1.2:11280446-11280465 | MS.gene059129:intron | 25.0% |
| ! | TTCTAATTGAGTTATACTCA+TGG | - | chr1.2:11279624-11279643 | MS.gene059129:CDS | 25.0% |
| ! | TTGTGTCAATTCATAATCAT+AGG | + | chr1.2:11280792-11280811 | None:intergenic | 25.0% |
| !! | CAAATTTCATTAGTTTGGAT+TGG | + | chr1.2:11280747-11280766 | None:intergenic | 25.0% |
| !! | TTGAGAAAATTTTCAATGGA+GGG | + | chr1.2:11279869-11279888 | None:intergenic | 25.0% |
| !!! | CACACCTATTTTTGTTATTT+TGG | - | chr1.2:11279029-11279048 | MS.gene059129:CDS | 25.0% |
| !!! | CGTATTTTTTTAATCCATTC+TGG | - | chr1.2:11280371-11280390 | MS.gene059129:intron | 25.0% |
| !!! | TAGTTGTTGTATTTTAATGG+TGG | + | chr1.2:11279912-11279931 | None:intergenic | 25.0% |
| !!! | TTTTTTAATCCATTCTGGTT+CGG | - | chr1.2:11280376-11280395 | MS.gene059129:intron | 25.0% |
| AAAAGACCAGTCTTAATATG+TGG | - | chr1.2:11279714-11279733 | MS.gene059129:intron | 30.0% | |
| ACAATGGAATCCTAAACATT+TGG | - | chr1.2:11281737-11281756 | MS.gene059129:intron | 30.0% | |
| ACCATAATGGTATATACCAT+TGG | - | chr1.2:11279443-11279462 | MS.gene059129:CDS | 30.0% | |
| ACTTGAAAAGCCAAATGTTT+AGG | + | chr1.2:11281750-11281769 | None:intergenic | 30.0% | |
| AGTTATGAATGGAACACATT+TGG | - | chr1.2:11279001-11279020 | MS.gene059129:CDS | 30.0% | |
| ATAACACTTGTGTACCATAA+TGG | - | chr1.2:11279430-11279449 | MS.gene059129:CDS | 30.0% | |
| ATAAGGTTTATGGCCTTTAA+CGG | + | chr1.2:11279777-11279796 | None:intergenic | 30.0% | |
| ATAAGTGAGTGTGAAGAAAA+TGG | - | chr1.2:11281396-11281415 | MS.gene059129:intron | 30.0% | |
| ATATACCATTGGTACCTTAA+AGG | - | chr1.2:11279567-11279586 | MS.gene059129:CDS | 30.0% | |
| ATATGTACTAACCAAGATGA+AGG | + | chr1.2:11278963-11278982 | None:intergenic | 30.0% | |
| CAAGAATATGTAATGGCAAA+AGG | - | chr1.2:11281543-11281562 | MS.gene059129:intron | 30.0% | |
| CACGTGATAACTAAAGTATA+TGG | - | chr1.2:11279182-11279201 | MS.gene059129:CDS | 30.0% | |
| CACTCCTAATTATCTTAGTT+CGG | + | chr1.2:11280301-11280320 | None:intergenic | 30.0% | |
| CATGCATAATTAGTGCAATT+GGG | - | chr1.2:11279834-11279853 | MS.gene059129:intron | 30.0% | |
| CTAAAGTATATGGTCTAAAG+TGG | - | chr1.2:11279192-11279211 | MS.gene059129:CDS | 30.0% | |
| GACAGTAAAAAACTGCATAA+GGG | + | chr1.2:11281623-11281642 | None:intergenic | 30.0% | |
| GCAGCATAATTGTACAAAAA+TGG | + | chr1.2:11281138-11281157 | None:intergenic | 30.0% | |
| GCTCATATATGTATCCATTA+GGG | + | chr1.2:11280279-11280298 | None:intergenic | 30.0% | |
| TAAAGTGGTCCAATTGATAA+AGG | - | chr1.2:11279207-11279226 | MS.gene059129:CDS | 30.0% | |
| TAATTAGTGCAATTGGGATT+TGG | - | chr1.2:11279840-11279859 | MS.gene059129:intron | 30.0% | |
| TCAACTTTGCTTGAAGAAAA+AGG | + | chr1.2:11281312-11281331 | None:intergenic | 30.0% | |
| TCATGCATAATTAGTGCAAT+TGG | - | chr1.2:11279833-11279852 | MS.gene059129:intron | 30.0% | |
| TGACAGTAAAAAACTGCATA+AGG | + | chr1.2:11281624-11281643 | None:intergenic | 30.0% | |
| TGTGAAGAAAATGGTATCAA+AGG | - | chr1.2:11281405-11281424 | MS.gene059129:intron | 30.0% | |
| TTAGAAAAGGATTTGCATCA+AGG | - | chr1.2:11281204-11281223 | MS.gene059129:intron | 30.0% | |
| TTTGAATCACTGAATTGAAC+TGG | + | chr1.2:11280340-11280359 | None:intergenic | 30.0% | |
| ! | AAACCACTTCAAGTTTGATT+GGG | + | chr1.2:11280407-11280426 | None:intergenic | 30.0% |
| ! | AAACTTGAGAGAATTTTCAC+CGG | - | chr1.2:11279996-11280015 | MS.gene059129:intron | 30.0% |
| ! | AGCACTTTTCTTCTTAGAAA+AGG | - | chr1.2:11281191-11281210 | MS.gene059129:intron | 30.0% |
| ! | CTTGAGAAAATTTTCAATGG+AGG | + | chr1.2:11279870-11279889 | None:intergenic | 30.0% |
| ! | TGACTTGCAAGAATATGTAA+TGG | - | chr1.2:11281536-11281555 | MS.gene059129:intron | 30.0% |
| ! | TGAGAAAATTTTCAATGGAG+GGG | + | chr1.2:11279868-11279887 | None:intergenic | 30.0% |
| ! | TTAATGGTGGAGATTGAAAA+TGG | + | chr1.2:11279899-11279918 | None:intergenic | 30.0% |
| !! | AAGAAGAAAAGTGCTACATT+TGG | + | chr1.2:11281186-11281205 | None:intergenic | 30.0% |
| !! | CTAATGAAATTTGATTCGGT+CGG | - | chr1.2:11280754-11280773 | MS.gene059129:intron | 30.0% |
| !! | TAATGAAATTTGATTCGGTC+GGG | - | chr1.2:11280755-11280774 | MS.gene059129:intron | 30.0% |
| !!! | GTTTTTTTACCAGAGATGTT+AGG | + | chr1.2:11279057-11279076 | None:intergenic | 30.0% |
| !!! | TGTACTATTTTGAAGTCCTT+CGG | + | chr1.2:11280206-11280225 | None:intergenic | 30.0% |
| AAACAACATGATCTTGTGGA+AGG | + | chr1.2:11281812-11281831 | None:intergenic | 35.0% | |
| AAACCAGTACATGTTTCAGT+TGG | - | chr1.2:11281102-11281121 | MS.gene059129:intron | 35.0% | |
| AAAGGAACATCAGTAGATGT+AGG | - | chr1.2:11280847-11280866 | MS.gene059129:intron | 35.0% | |
| AACATATTCTCCATCAAGGA+AGG | - | chr1.2:11281342-11281361 | MS.gene059129:intron | 35.0% | |
| ACAGCAGTTAATGTTGGAAA+AGG | - | chr1.2:11281045-11281064 | MS.gene059129:intron | 35.0% | |
| ACATCAGTAGATGTAGGAAA+AGG | - | chr1.2:11280853-11280872 | MS.gene059129:intron | 35.0% | |
| ACTTAGTATGACAATTGCAC+GGG | + | chr1.2:11280034-11280053 | None:intergenic | 35.0% | |
| AGAAAATGGTATCAAAGGAG+AGG | - | chr1.2:11281410-11281429 | MS.gene059129:intron | 35.0% | |
| AGGCACATGCTAAAATAGTT+TGG | + | chr1.2:11278770-11278789 | None:intergenic | 35.0% | |
| ATAAAGATTGGACCCGTTAA+AGG | - | chr1.2:11279761-11279780 | MS.gene059129:intron | 35.0% | |
| ATTCCACTTGTGTACCTTTA+AGG | + | chr1.2:11279584-11279603 | None:intergenic | 35.0% | |
| CACTTAGTATGACAATTGCA+CGG | + | chr1.2:11280035-11280054 | None:intergenic | 35.0% | |
| CCTTAACATATTCTCCATCA+AGG | - | chr1.2:11281338-11281357 | MS.gene059129:intron | 35.0% | |
| CCTTGATGGAGAATATGTTA+AGG | + | chr1.2:11281341-11281360 | None:intergenic | 35.0% | |
| GATTTCACTACTTCGAAACT+TGG | - | chr1.2:11281468-11281487 | MS.gene059129:intron | 35.0% | |
| GCAAAAGGAGTGAAGAAATT+GGG | - | chr1.2:11281558-11281577 | MS.gene059129:intron | 35.0% | |
| GCCAATGGTATATACCATTA+TGG | + | chr1.2:11279447-11279466 | None:intergenic | 35.0% | |
| GGCTCATATATGTATCCATT+AGG | + | chr1.2:11280280-11280299 | None:intergenic | 35.0% | |
| GTTCATGTAAATGCAGGTAA+AGG | - | chr1.2:11281006-11281025 | MS.gene059129:intron | 35.0% | |
| TAAAGTTTACTCTGTGCCTT+TGG | - | chr1.2:11281659-11281678 | MS.gene059129:CDS | 35.0% | |
| TAAGGTTTATGGCCTTTAAC+GGG | + | chr1.2:11279776-11279795 | None:intergenic | 35.0% | |
| TGAACCGAACCTTTATCAAT+TGG | + | chr1.2:11279219-11279238 | None:intergenic | 35.0% | |
| TGAGCCGAACTAAGATAATT+AGG | - | chr1.2:11280294-11280313 | MS.gene059129:intron | 35.0% | |
| TGCACTAATTATGCATGAGT+CGG | + | chr1.2:11279831-11279850 | None:intergenic | 35.0% | |
| TGGTCAATGGTATATACCAT+TGG | - | chr1.2:11279556-11279575 | MS.gene059129:CDS | 35.0% | |
| TGGTCCAATTGATAAAGGTT+CGG | - | chr1.2:11279212-11279231 | MS.gene059129:CDS | 35.0% | |
| TGTGACATCATTGGAATCAA+TGG | - | chr1.2:11281443-11281462 | MS.gene059129:intron | 35.0% | |
| TTCCACAAGATCATGTTGTT+TGG | - | chr1.2:11281811-11281830 | MS.gene059129:CDS | 35.0% | |
| TTTCCAACTGAAACATGTAC+TGG | + | chr1.2:11281108-11281127 | None:intergenic | 35.0% | |
| ! | AAAGCTTTGTGTGACATCAT+TGG | - | chr1.2:11281434-11281453 | MS.gene059129:intron | 35.0% |
| ! | CAAACCACTTCAAGTTTGAT+TGG | + | chr1.2:11280408-11280427 | None:intergenic | 35.0% |
| ! | TCCACAAGATCATGTTGTTT+GGG | - | chr1.2:11281812-11281831 | MS.gene059129:CDS | 35.0% |
| ! | TTCTCTCAAGTTTTCTCATG+TGG | + | chr1.2:11279989-11280008 | None:intergenic | 35.0% |
| ! | TTTTGCATCGTCATTTGAGT+TGG | + | chr1.2:11281259-11281278 | None:intergenic | 35.0% |
| !! | AAACTTGAAGTGGTTTGCTT+TGG | - | chr1.2:11280411-11280430 | MS.gene059129:intron | 35.0% |
| !! | TTGTTTTTCCTGCATCAACA+TGG | + | chr1.2:11280948-11280967 | None:intergenic | 35.0% |
| !!! | ATTTTGGTTCCTAACATCTC+TGG | - | chr1.2:11279045-11279064 | MS.gene059129:CDS | 35.0% |
| AAGATGAAGGAGATCAGTGA+TGG | + | chr1.2:11278950-11278969 | None:intergenic | 40.0% | |
| AATGCAGGTAAAGGAAAACC+AGG | - | chr1.2:11281015-11281034 | MS.gene059129:intron | 40.0% | |
| ACAGCAGTGAATGTTGGAAA+AGG | - | chr1.2:11280979-11280998 | MS.gene059129:intron | 40.0% | |
| ACCACATTCTAATTGGCCAA+TGG | + | chr1.2:11279462-11279481 | None:intergenic | 40.0% | |
| ACCATTGGCCAATTAGAATG+TGG | - | chr1.2:11279458-11279477 | MS.gene059129:CDS | 40.0% | |
| ACCCAAACAACATGATCTTG+TGG | + | chr1.2:11281816-11281835 | None:intergenic | 40.0% | |
| ACCTCAGTGAATGTTGGAAA+AGG | - | chr1.2:11280916-11280935 | MS.gene059129:intron | 40.0% | |
| ACGCATAATCGCGATGATTA+AGG | - | chr1.2:11280693-11280712 | MS.gene059129:intron | 40.0% | |
| ACTTTCTCTCTCATGATTGG+TGG | - | chr1.2:11279955-11279974 | MS.gene059129:intron | 40.0% | |
| ATCACTGATCTCCTTCATCT+TGG | - | chr1.2:11278949-11278968 | MS.gene059129:CDS | 40.0% | |
| CACTAATTATGCATGAGTCG+GGG | + | chr1.2:11279829-11279848 | None:intergenic | 40.0% | |
| CATCCCAATCAAACTTGAAG+TGG | - | chr1.2:11280401-11280420 | MS.gene059129:intron | 40.0% | |
| CTCACTTTCTCTCTCATGAT+TGG | - | chr1.2:11279952-11279971 | MS.gene059129:intron | 40.0% | |
| GATTCCGGAAAAACAAAACC+AGG | - | chr1.2:11280889-11280908 | MS.gene059129:intron | 40.0% | |
| GCACTAATTATGCATGAGTC+GGG | + | chr1.2:11279830-11279849 | None:intergenic | 40.0% | |
| GCAGTTAATGTTGGAAAAGG+TGG | - | chr1.2:11281048-11281067 | MS.gene059129:intron | 40.0% | |
| GGCAAAAGGAGTGAAGAAAT+TGG | - | chr1.2:11281557-11281576 | MS.gene059129:intron | 40.0% | |
| GTAGATTGGACAGAAGAGAA+AGG | - | chr1.2:11280829-11280848 | MS.gene059129:intron | 40.0% | |
| GTCAATGTTCATGCAGGAAA+AGG | - | chr1.2:11281072-11281091 | MS.gene059129:intron | 40.0% | |
| GTCACACTGATACATCACAA+TGG | - | chr1.2:11281721-11281740 | MS.gene059129:intron | 40.0% | |
| GTGAGTTATGTTCACTGAGA+CGG | - | chr1.2:11280052-11280071 | MS.gene059129:intron | 40.0% | |
| TAATCATCGCGATTATGCGT+GGG | + | chr1.2:11280693-11280712 | None:intergenic | 40.0% | |
| TAGTGTTCGATAGAAACCGA+AGG | - | chr1.2:11280187-11280206 | MS.gene059129:intron | 40.0% | |
| TCAGTAGATGTAGGAAAAGG+AGG | - | chr1.2:11280856-11280875 | MS.gene059129:intron | 40.0% | |
| TCAGTGAATGTTGGAAAAGG+TGG | - | chr1.2:11280919-11280938 | MS.gene059129:intron | 40.0% | |
| TGAGTTATGTTCACTGAGAC+GGG | - | chr1.2:11280053-11280072 | MS.gene059129:intron | 40.0% | |
| TGTATCCATTAGGGTGTGTT+TGG | + | chr1.2:11280270-11280289 | None:intergenic | 40.0% | |
| TTAATCATCGCGATTATGCG+TGG | + | chr1.2:11280694-11280713 | None:intergenic | 40.0% | |
| TTCTTCTGTTCCTTCCTTGA+TGG | + | chr1.2:11281355-11281374 | None:intergenic | 40.0% | |
| ! | ACCTTTTCCAACATTCACTG+AGG | + | chr1.2:11280920-11280939 | None:intergenic | 40.0% |
| ! | CACTTCAAGTTTGATTGGGA+TGG | + | chr1.2:11280403-11280422 | None:intergenic | 40.0% |
| ! | GTACCTTAAAGGTACACAAG+TGG | - | chr1.2:11279578-11279597 | MS.gene059129:CDS | 40.0% |
| !! | AATTAGGAGTGTTCACGAGT+CGG | - | chr1.2:11280310-11280329 | MS.gene059129:intron | 40.0% |
| !! | CATTTGAGTTGTGGGAAGTT+TGG | + | chr1.2:11278920-11278939 | None:intergenic | 40.0% |
| !! | GTGTACCTTTAAGGTACCAA+TGG | + | chr1.2:11279575-11279594 | None:intergenic | 40.0% |
| !!! | GCTTTTGGCATTTGAGTTGT+GGG | + | chr1.2:11278928-11278947 | None:intergenic | 40.0% |
| !!! | TCCTCCTGGTTTTGTTTTTC+CGG | + | chr1.2:11280896-11280915 | None:intergenic | 40.0% |
| AAGAGCCAAACACACCCTAA+TGG | - | chr1.2:11280262-11280281 | MS.gene059129:intron | 45.0% | |
| ATTATGCATGAGTCGGGGAT+AGG | + | chr1.2:11279824-11279843 | None:intergenic | 45.0% | |
| CAAGTGCTCAATGTTCAACC+TGG | - | chr1.2:11281765-11281784 | MS.gene059129:intron | 45.0% | |
| CTTCCATCAACACCTTCCAA+AGG | + | chr1.2:11281678-11281697 | None:intergenic | 45.0% | |
| GATAGGTGGCACACTCTAAT+TGG | - | chr1.2:11279536-11279555 | MS.gene059129:CDS | 45.0% | |
| GATGCAGGAAAAACAAAGCC+AGG | - | chr1.2:11280952-11280971 | MS.gene059129:intron | 45.0% | |
| GCAGTGAATGTTGGAAAAGG+TGG | - | chr1.2:11280982-11281001 | MS.gene059129:intron | 45.0% | |
| GCCAATTAGAATGTGGTACG+TGG | - | chr1.2:11279465-11279484 | MS.gene059129:CDS | 45.0% | |
| GCCACGTACCACATTCTAAT+TGG | + | chr1.2:11279469-11279488 | None:intergenic | 45.0% | |
| GGCACACTCTAATTGGTCAA+TGG | - | chr1.2:11279543-11279562 | MS.gene059129:CDS | 45.0% | |
| GGGGATAGGCTATGCAAAAA+AGG | + | chr1.2:11279810-11279829 | None:intergenic | 45.0% | |
| GGTGGAACAGCAGTTAATGT+TGG | - | chr1.2:11281039-11281058 | MS.gene059129:intron | 45.0% | |
| GGTGGAGTTCATGTAAATGC+AGG | - | chr1.2:11281000-11281019 | MS.gene059129:intron | 45.0% | |
| GTATGACAATTGCACGGGTT+TGG | + | chr1.2:11280029-11280048 | None:intergenic | 45.0% | |
| GTTCATGCAGGAAAAGGAAG+AGG | - | chr1.2:11281078-11281097 | MS.gene059129:intron | 45.0% | |
| GTTTACTCTGTGCCTTTGGA+AGG | - | chr1.2:11281663-11281682 | MS.gene059129:CDS | 45.0% | |
| TCCGGAAAAACAAAACCAGG+AGG | - | chr1.2:11280892-11280911 | MS.gene059129:intron | 45.0% | |
| TGACAAACTGGAACAGTTCC+AGG | + | chr1.2:11281786-11281805 | None:intergenic | 45.0% | |
| TGGACTTCCAGTACACTTCA+GGG | + | chr1.2:11278900-11278919 | None:intergenic | 45.0% | |
| TGTGGAAGGAAGTGACAAAC+TGG | + | chr1.2:11281798-11281817 | None:intergenic | 45.0% | |
| TTGGACTTCCAGTACACTTC+AGG | + | chr1.2:11278901-11278920 | None:intergenic | 45.0% | |
| ! | AGGAGATCAGTGATGGCTTT+TGG | + | chr1.2:11278943-11278962 | None:intergenic | 45.0% |
| !! | GGAGGTGTGAATGTTGATTC+CGG | - | chr1.2:11280874-11280893 | MS.gene059129:intron | 45.0% |
| !!! | GGCTTTTGGCATTTGAGTTG+TGG | + | chr1.2:11278929-11278948 | None:intergenic | 45.0% |
| !! | AAAATAAAAAATAAAATCTT+AGG | + | chr1.2:11279125-11279144 | None:intergenic | 5.0% |
| !! | TTATTTATGAAATAATAAAA+AGG | + | chr1.2:11278805-11278824 | None:intergenic | 5.0% |
| !!! | ATTTTATTAAATAAAATGAA+CGG | - | chr1.2:11279675-11279694 | MS.gene059129:CDS | 5.0% |
| !!! | TAAGATTTTATTTTTTATTT+TGG | - | chr1.2:11279124-11279143 | MS.gene059129:CDS | 5.0% |
| !!! | TATTTGATATTTTTTTTAAA+GGG | + | chr1.2:11279495-11279514 | None:intergenic | 5.0% |
| !!! | TTATTTGATATTTTTTTTAA+AGG | + | chr1.2:11279496-11279515 | None:intergenic | 5.0% |
| ACATTCACTGAGGTTCCTCC+TGG | + | chr1.2:11280910-11280929 | None:intergenic | 50.0% | |
| ACATTCACTGCTGTTCCACC+TGG | + | chr1.2:11280973-11280992 | None:intergenic | 50.0% | |
| CACTGAGACGGGTACATACT+CGG | - | chr1.2:11280064-11280083 | MS.gene059129:intron | 50.0% | |
| GAAGAGACAGTGCAGTATGC+AGG | + | chr1.2:11279607-11279626 | None:intergenic | 50.0% | |
| GACTTCCAGTACACTTCAGG+GGG | + | chr1.2:11278898-11278917 | None:intergenic | 50.0% | |
| GCAGGAAAAACAAAGCCAGG+TGG | - | chr1.2:11280955-11280974 | MS.gene059129:intron | 50.0% | |
| GCAGGTAAAGGAAAACCAGG+TGG | - | chr1.2:11281018-11281037 | MS.gene059129:intron | 50.0% | |
| GGACTTCCAGTACACTTCAG+GGG | + | chr1.2:11278899-11278918 | None:intergenic | 50.0% | |
| GGAGGAACCTCAGTGAATGT+TGG | - | chr1.2:11280910-11280929 | MS.gene059129:intron | 50.0% | |
| GGTAAAGGAAAACCAGGTGG+TGG | - | chr1.2:11281021-11281040 | MS.gene059129:intron | 50.0% | |
| GGTGGAACAGCAGTGAATGT+TGG | - | chr1.2:11280973-11280992 | MS.gene059129:intron | 50.0% | |
| TTAACTGCTGTTCCACCACC+TGG | + | chr1.2:11281036-11281055 | None:intergenic | 50.0% | |
| TTTGAACGGGCCGAGTTCAT+TGG | + | chr1.2:11280459-11280478 | None:intergenic | 50.0% | |
| ! | GATTCGGTCGGGTAAGAGTT+TGG | - | chr1.2:11280766-11280785 | MS.gene059129:intron | 50.0% |
| ! | GGTGGTGTCAATGTTCATGC+AGG | - | chr1.2:11281066-11281085 | MS.gene059129:intron | 50.0% |
| !! | CGATTATGCGTGGGTTGGTT+TGG | + | chr1.2:11280684-11280703 | None:intergenic | 50.0% |
| !! | GTGCCTTTGGAAGGTGTTGA+TGG | - | chr1.2:11281672-11281691 | MS.gene059129:CDS | 50.0% |
| CATCGCGATTATGCGTGGGT+TGG | + | chr1.2:11280689-11280708 | None:intergenic | 55.0% | |
| CCAGTACACTTCAGGGGGTA+AGG | + | chr1.2:11278893-11278912 | None:intergenic | 55.0% | |
| CCTTACCCCCTGAAGTGTAC+TGG | - | chr1.2:11278890-11278909 | MS.gene059129:CDS | 55.0% | |
| GCACGGGTTTGGATTCTCTC+CGG | + | chr1.2:11280018-11280037 | None:intergenic | 55.0% | |
| GGTGGAGTCCATGTTGATGC+AGG | - | chr1.2:11280937-11280956 | MS.gene059129:intron | 55.0% | |
| TGGGATGGACCGAACCAGAA+TGG | + | chr1.2:11280388-11280407 | None:intergenic | 55.0% | |
| TTCAGGGGGTAAGGCAGCAT+GGG | + | chr1.2:11278884-11278903 | None:intergenic | 55.0% | |
| CTTCAGGGGGTAAGGCAGCA+TGG | + | chr1.2:11278885-11278904 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 11278714 | 11281845 | 11278714 | ID=MS.gene059129 |
| chr1.2 | mRNA | 11278714 | 11281845 | 11278714 | ID=MS.gene059129.t1;Parent=MS.gene059129 |
| chr1.2 | exon | 11281807 | 11281845 | 11281807 | ID=MS.gene059129.t1.exon1;Parent=MS.gene059129.t1 |
| chr1.2 | CDS | 11281807 | 11281845 | 11281807 | ID=cds.MS.gene059129.t1;Parent=MS.gene059129.t1 |
| chr1.2 | exon | 11281589 | 11281694 | 11281589 | ID=MS.gene059129.t1.exon2;Parent=MS.gene059129.t1 |
| chr1.2 | CDS | 11281589 | 11281694 | 11281589 | ID=cds.MS.gene059129.t1;Parent=MS.gene059129.t1 |
| chr1.2 | exon | 11278714 | 11279726 | 11278714 | ID=MS.gene059129.t1.exon3;Parent=MS.gene059129.t1 |
| chr1.2 | CDS | 11278714 | 11279726 | 11278714 | ID=cds.MS.gene059129.t1;Parent=MS.gene059129.t1 |
| Gene Sequence |
| Protein sequence |
