AlfalfaGEDB | MS.gene36820

M. sativa cultivar XinJiangDaYe / MS.gene36820

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005634 GO:0006355 GO:0008150 GO:0008270 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0045893 GO:0045935 GO:0046872 GO:0046914 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0110165 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF00320.30

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36820.t1	XP_003627002.1	99	290	3	0	1	290	1	290	8.50E-165	589.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36820.t1	O82632	49.6	272	97	11	33	290	16	261	6.8e-54	212.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36820.t1	G7LFY2	99.0	290	3	0	1	290	1	290	6.1e-165	589.7

TFs/TRs:

Gene ID	Type	Classification
MS.gene36820.t1	TF	C2C2-GATA

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049298	MS.gene36820	0.847226	1.32E-59	-1.69E-46
MS.gene050710	MS.gene36820	0.836822	7.47E-57	-1.69E-46
MS.gene051914	MS.gene36820	0.803876	2.83E-49	-1.69E-46
MS.gene052169	MS.gene36820	0.819394	1.19E-52	-1.69E-46
MS.gene052209	MS.gene36820	0.838712	2.44E-57	-1.69E-46
MS.gene053108	MS.gene36820	0.801566	8.48E-49	-1.69E-46
MS.gene054662	MS.gene36820	0.812306	4.53E-51	-1.69E-46
MS.gene054850	MS.gene36820	0.819934	8.95E-53	-1.69E-46
MS.gene054941	MS.gene36820	0.841855	3.69E-58	-1.69E-46
MS.gene056387	MS.gene36820	-0.8056	1.23E-49	-1.69E-46
MS.gene05652	MS.gene36820	0.885933	5.30E-72	-1.69E-46
MS.gene056688	MS.gene36820	0.80183	7.48E-49	-1.69E-46
MS.gene057356	MS.gene36820	0.811723	6.07E-51	-1.69E-46
MS.gene057367	MS.gene36820	0.809056	2.28E-50	-1.69E-46
MS.gene057669	MS.gene36820	0.875812	2.29E-68	-1.69E-46
MS.gene057717	MS.gene36820	0.816714	4.80E-52	-1.69E-46
MS.gene058128	MS.gene36820	0.834674	2.62E-56	-1.69E-46
MS.gene058853	MS.gene36820	0.822312	2.53E-53	-1.69E-46
MS.gene05926	MS.gene36820	0.856017	4.27E-62	-1.69E-46
MS.gene05960	MS.gene36820	0.803468	3.44E-49	-1.69E-46
MS.gene059616	MS.gene36820	0.848518	5.82E-60	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36820.t1	MTR_8g013950	98.830	342	3	1	1	341	1	342	0.0	702
MS.gene36820.t1	MTR_1g006650	46.726	336	133	11	35	341	26	344	1.07e-82	254
MS.gene36820.t1	MTR_3g109760	44.809	366	129	11	1	341	1	318	1.63e-80	248
MS.gene36820.t1	MTR_8g076340	39.362	282	119	7	31	295	41	287	5.68e-48	163
MS.gene36820.t1	MTR_4g071590	38.112	286	110	10	33	295	39	280	8.19e-43	150
MS.gene36820.t1	MTR_4g471590	38.112	286	110	10	33	295	39	280	8.19e-43	150
MS.gene36820.t1	MTR_5g021340	40.336	238	80	6	102	295	150	369	1.07e-40	147
MS.gene36820.t1	MTR_3g117380	36.429	280	127	6	33	295	53	298	4.46e-40	143
MS.gene36820.t1	MTR_6g032830	39.316	234	76	10	115	292	35	258	9.55e-36	130
MS.gene36820.t1	MTR_1g046680	58.824	119	44	3	179	295	126	241	4.10e-35	128
MS.gene36820.t1	MTR_5g007600	76.389	72	17	0	225	296	258	329	2.18e-33	126
MS.gene36820.t1	MTR_5g007600	76.923	65	15	0	225	289	156	220	2.76e-29	115
MS.gene36820.t1	MTR_1g094930	81.538	65	12	0	226	290	147	211	2.26e-33	124
MS.gene36820.t1	MTR_1g094930	58.333	96	33	1	226	321	242	330	6.13e-33	125
MS.gene36820.t1	MTR_7g085410	75.385	65	16	0	226	290	188	252	4.78e-31	118
MS.gene36820.t1	MTR_4g058910	52.727	110	40	1	212	321	300	397	1.23e-29	117
MS.gene36820.t1	MTR_1g116010	75.385	65	16	0	226	290	164	228	1.69e-29	114
MS.gene36820.t1	MTR_2g094600	75.385	65	16	0	226	290	216	280	2.09e-29	115
MS.gene36820.t1	MTR_7g446110	53.947	76	34	1	213	287	173	248	4.27e-21	91.3
MS.gene36820.t1	MTR_7g445950	32.597	181	93	5	107	287	30	181	2.23e-19	84.7
MS.gene36820.t1	MTR_7g446070	31.492	181	107	4	107	287	30	193	3.16e-19	84.7
MS.gene36820.t1	MTR_7g445980	60.000	60	23	1	230	288	37	96	9.15e-18	77.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36820.t1	AT4G32890	48.148	324	122	13	33	341	16	308	1.78e-81	250
MS.gene36820.t1	AT5G25830	44.290	359	107	15	35	341	14	331	1.48e-72	228
MS.gene36820.t1	AT3G60530	48.792	207	58	8	101	298	63	230	9.57e-49	164
MS.gene36820.t1	AT2G45050	44.954	218	67	5	104	300	68	253	2.52e-48	164
MS.gene36820.t1	AT5G66320	41.277	235	79	6	102	294	100	317	6.70e-41	146
MS.gene36820.t1	AT5G66320	41.277	235	79	6	102	294	100	317	6.70e-41	146
MS.gene36820.t1	AT4G36240	39.114	271	103	10	35	293	11	231	5.35e-40	141
MS.gene36820.t1	AT4G34680	44.444	189	73	3	107	295	93	249	2.92e-39	140
MS.gene36820.t1	AT4G34680	44.444	189	73	3	107	295	93	249	2.92e-39	140
MS.gene36820.t1	AT1G08010	76.056	71	17	0	226	296	220	290	1.00e-33	126
MS.gene36820.t1	AT1G08010	76.056	71	17	0	226	296	220	290	1.00e-33	126
MS.gene36820.t1	AT1G08010	76.056	71	17	0	226	296	220	290	1.00e-33	126
MS.gene36820.t1	AT3G24050	77.941	68	15	0	225	292	193	260	1.56e-33	125
MS.gene36820.t1	AT3G54810	61.290	93	36	0	226	318	229	321	2.14e-33	126
MS.gene36820.t1	AT3G54810	61.290	93	36	0	226	318	229	321	2.14e-33	126
MS.gene36820.t1	AT3G51080	73.913	69	18	0	226	294	221	289	7.22e-31	119
MS.gene36820.t1	AT1G08000	74.627	67	17	0	226	292	218	284	1.24e-30	118
MS.gene36820.t1	AT1G08000	74.627	67	17	0	226	292	218	284	1.24e-30	118
MS.gene36820.t1	AT3G45170	57.143	77	33	0	218	294	107	183	5.03e-26	103
MS.gene36820.t1	AT2G28340	66.154	65	22	0	228	292	193	257	4.55e-25	103
MS.gene36820.t1	AT3G06740	32.990	97	40	2	226	307	41	127	5.36e-11	60.5

Find 86 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCCTGGTAGAGGTGTTTC+TGG	0.198536	8.3:-74845576	None:intergenic
GGAAGAGTCGGTGAAATTTC+CGG	0.220619	8.3:-74845119	None:intergenic
GAATTCTCATAGGAAAGTTT+TGG	0.321671	8.3:+74845893	MS.gene36820:CDS
GACGCTTCTCCGGCGAGAAT+TGG	0.338370	8.3:-74844991	None:intergenic
TCCTCACGCTTCTTCACAAT+TGG	0.355227	8.3:-74845684	None:intergenic
GTATGATGACATGGCGGAAC+TGG	0.373031	8.3:+74845377	MS.gene36820:intron
AGGCGCGTGGACCAGTCTCC+TGG	0.390187	8.3:-74845627	None:intergenic
CTTCCAGAACATTCCACATT+CGG	0.390638	8.3:-74845708	None:intergenic
GATCCGAATGTGGAATGTTC+TGG	0.407889	8.3:+74845705	MS.gene36820:CDS
CACGCGCTGCTCCAGGAGAC+TGG	0.436417	8.3:+74845616	MS.gene36820:CDS
AGCTGTAACTCGTCTGGCTC+TGG	0.462242	8.3:+74845160	MS.gene36820:CDS
ATCAATTATCATCATCATTG+TGG	0.463155	8.3:+74846032	MS.gene36820:CDS
TACTTTGTCGGTGGCTACTA+CGG	0.465894	8.3:+74844956	MS.gene36820:CDS
AAGACGCCGCAGTGGAGAAC+AGG	0.467796	8.3:+74845756	MS.gene36820:CDS
TGGTCACCGTGACGCTTCTC+CGG	0.476812	8.3:-74845001	None:intergenic
CGAAGCATTCGAATTCTCAT+AGG	0.477067	8.3:+74845883	MS.gene36820:CDS
AAACGTTCACGCGCTGCTCC+AGG	0.479630	8.3:+74845609	MS.gene36820:CDS
GCGCGTCGGGGAGATGTAGT+AGG	0.479766	8.3:-74845647	None:intergenic
TCAATTATCATCATCATTGT+GGG	0.480828	8.3:+74846033	MS.gene36820:CDS
GAAGCACAAGATTACTTTGT+CGG	0.482794	8.3:+74844944	MS.gene36820:CDS
CACCGGTGAACTCTGTGTTC+CGG	0.483064	8.3:+74845243	MS.gene36820:CDS
TCCGGTGATGTTCAACTCAC+CGG	0.487659	8.3:+74845226	MS.gene36820:CDS
GTTGACAGCTGTAACTCGTC+TGG	0.493159	8.3:+74845154	MS.gene36820:CDS
AAAACATTGCAACTTCTCTC+CGG	0.498282	8.3:+74845450	MS.gene36820:CDS
CGGTTTAACAGCACCGGCGC+CGG	0.503197	8.3:-74845469	None:intergenic
GATGAAGATTCCGGTGTTTG+CGG	0.503689	8.3:-74845489	None:intergenic
GGAGGCACAATTGTTCCGTA+TGG	0.507701	8.3:+74845199	MS.gene36820:CDS
TAAGTCCGGTAGGTTGGTGC+CGG	0.508279	8.3:+74845824	MS.gene36820:CDS
TTGCAACTTCTCTCCGGCGC+CGG	0.510336	8.3:+74845456	MS.gene36820:CDS
TCTGGTGGTGATAACCGCTT+TGG	0.512040	8.3:+74845178	MS.gene36820:CDS
CAGTGGAGAACAGGACCAAT+GGG	0.512631	8.3:+74845765	MS.gene36820:CDS
GGTGGTGATAACCGCTTTGG+AGG	0.525558	8.3:+74845181	MS.gene36820:CDS
TGCTTCGCCGATACAAAAGT+TGG	0.526129	8.3:-74845867	None:intergenic
CTCGCCGCCGGTCGATACTC+CGG	0.528513	8.3:-74845843	None:intergenic
AAAATCAAGTAAATCATCAA+TGG	0.529566	8.3:-74845047	None:intergenic
GTCGGTGGCTACTACGGTGC+CGG	0.534317	8.3:+74844962	MS.gene36820:CDS
CTGGTAGAGGTGTTTCTGGA+CGG	0.544153	8.3:-74845572	None:intergenic
CGTCCAGAAACACCTCTACC+AGG	0.545940	8.3:+74845573	MS.gene36820:CDS
GGAATGGCTTTCGAATTTCG+TGG	0.546230	8.3:+74845398	MS.gene36820:CDS
ACCGGTGAGTTGAACATCAC+CGG	0.549777	8.3:-74845227	None:intergenic
TCGGTGGAAGATGAAGATTC+CGG	0.552072	8.3:-74845498	None:intergenic
TTCTTCGATAACAATGTCGC+CGG	0.552150	8.3:+74845100	MS.gene36820:CDS
ATACTCCGGCACCAACCTAC+CGG	0.552745	8.3:-74845829	None:intergenic
GAGGTTTAAGTCCGGTAGGT+TGG	0.552850	8.3:+74845818	MS.gene36820:CDS
GTTTCGTCGGTGGAGAATGA+AGG	0.553392	8.3:-74845528	None:intergenic
GCTGTCAACAGCGGTGACAT+TGG	0.554444	8.3:-74845140	None:intergenic
GCAGTGGAGAACAGGACCAA+TGG	0.555338	8.3:+74845764	MS.gene36820:CDS
AGCGGTGACATTGGAAGAGT+CGG	0.570500	8.3:-74845131	None:intergenic
TGCTGTTAAACCGCAAACAC+CGG	0.571815	8.3:+74845479	MS.gene36820:CDS
TGTTTGCGGTTTAACAGCAC+CGG	0.574755	8.3:-74845475	None:intergenic
ACAAAAGTTGGACTCGCCGC+CGG	0.580278	8.3:-74845855	None:intergenic
ATGACATGGCGGAACTGGAA+TGG	0.581462	8.3:+74845382	MS.gene36820:CDS
TACCGGAACACAGAGTTCAC+CGG	0.583290	8.3:-74845245	None:intergenic
TAGATAACATGTCTAAACTC+TGG	0.596187	8.3:-74846056	None:intergenic
GTTGGTGCCGGAGTATCGAC+CGG	0.600084	8.3:+74845836	MS.gene36820:CDS
TGTAACTCGTCTGGCTCTGG+TGG	0.609264	8.3:+74845163	MS.gene36820:CDS
GAATGAAGGAAGTGTGTCGG+TGG	0.610970	8.3:-74845514	None:intergenic
AGTAAATCATCAATGGCGAA+AGG	0.614239	8.3:-74845040	None:intergenic
TTCTCGCCGGAGAAGCGTCA+CGG	0.616797	8.3:+74844995	MS.gene36820:CDS
TCAATGGCGAAAGGCTCACA+CGG	0.620341	8.3:-74845031	None:intergenic
GGGGAGATGTAGTAGGCGCG+TGG	0.625946	8.3:-74845640	None:intergenic
CGGCGAAAACCAATTCTCGC+CGG	0.631060	8.3:+74844982	MS.gene36820:CDS
GCCGACGCGATTATGTCTGA+CGG	0.638113	8.3:+74845076	MS.gene36820:CDS
GCACAAGATTACTTTGTCGG+TGG	0.638723	8.3:+74844947	MS.gene36820:CDS
GTTACGAGCAGTTTCGTCGG+TGG	0.641102	8.3:-74845538	None:intergenic
TGTGGTGTGAGGTTTAAGTC+CGG	0.641447	8.3:+74845810	MS.gene36820:CDS
GTGTGAGGTTTAAGTCCGGT+AGG	0.641902	8.3:+74845814	MS.gene36820:CDS
ACCGTCAGACATAATCGCGT+CGG	0.646289	8.3:-74845077	None:intergenic
AATTTCATAGTATGATGACA+TGG	0.646855	8.3:+74845368	MS.gene36820:intron
AAAATGTCTCCACTGCGGCA+CGG	0.653917	8.3:+74845731	MS.gene36820:CDS
GAAGCGTGAGGATCCGAATG+TGG	0.654903	8.3:+74845695	MS.gene36820:CDS
AGCGTTACGAGCAGTTTCGT+CGG	0.655792	8.3:-74845541	None:intergenic
GCGTCTTATCCGTGCCGCAG+TGG	0.667437	8.3:-74845740	None:intergenic
TATGCAATGCGTGTGGTGTG+AGG	0.675574	8.3:+74845799	MS.gene36820:CDS
GCACGGATAAGACGCCGCAG+TGG	0.685559	8.3:+74845748	MS.gene36820:CDS
GGAGAATGAAGGAAGTGTGT+CGG	0.695811	8.3:-74845517	None:intergenic
TTCGGCGTTTCATCTAACGG+TGG	0.696201	8.3:+74845999	MS.gene36820:CDS
TCCAATTGTGAAGAAGCGTG+AGG	0.700580	8.3:+74845683	MS.gene36820:CDS
GGTGCCGGAGTATCGACCGG+CGG	0.709828	8.3:+74845839	MS.gene36820:CDS
CGAGTTACAGCTGTCAACAG+CGG	0.715870	8.3:-74845149	None:intergenic
TTCATAGTATGATGACATGG+CGG	0.725133	8.3:+74845371	MS.gene36820:intron
GAACAATTGTGCCTCCAAAG+CGG	0.730079	8.3:-74845192	None:intergenic
AAAACACTATGCAATGCGTG+TGG	0.749100	8.3:+74845792	MS.gene36820:CDS
ATTGGTCCTGTTCTCCACTG+CGG	0.754224	8.3:-74845762	None:intergenic
ATGGCGAAAGGCTCACACGG+TGG	0.757233	8.3:-74845028	None:intergenic
GGAAGAAAATGTCTCCACTG+CGG	0.780752	8.3:+74845726	MS.gene36820:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATCAAGTAAATCATCAA+TGG	-	chr8.3:74845050-74845069	None:intergenic	20.0%
!!	ACTTCAATTATCTTCAATTA+CGG	-	chr8.3:74845303-74845322	None:intergenic	20.0%
!	AATTTCATAGTATGATGACA+TGG	+	chr8.3:74845368-74845387	MS.gene36820:intron	25.0%
!	ATCAATTATCATCATCATTG+TGG	+	chr8.3:74846032-74846051	MS.gene36820:CDS	25.0%
!	TCAATTATCATCATCATTGT+GGG	+	chr8.3:74846033-74846052	MS.gene36820:CDS	25.0%
!	TTAGTGACATTATTACTTAC+CGG	-	chr8.3:74845265-74845284	None:intergenic	25.0%
!!	TTCACAATTGGATAACTTTT+CGG	-	chr8.3:74845675-74845694	None:intergenic	25.0%
	TAGATAACATGTCTAAACTC+TGG	-	chr8.3:74846059-74846078	None:intergenic	30.0%
!	GAATTCTCATAGGAAAGTTT+TGG	+	chr8.3:74845893-74845912	MS.gene36820:CDS	30.0%
!	TGTTTTCAATTCTTCTTCAG+CGG	-	chr8.3:74845436-74845455	None:intergenic	30.0%
	AAAACATTGCAACTTCTCTC+CGG	+	chr8.3:74845450-74845469	MS.gene36820:CDS	35.0%
	AGTAAATCATCAATGGCGAA+AGG	-	chr8.3:74845043-74845062	None:intergenic	35.0%
	GAAGCACAAGATTACTTTGT+CGG	+	chr8.3:74844944-74844963	MS.gene36820:CDS	35.0%
	TTCATAGTATGATGACATGG+CGG	+	chr8.3:74845371-74845390	MS.gene36820:intron	35.0%
!	ACAATTGGATAACTTTTCGG+TGG	-	chr8.3:74845672-74845691	None:intergenic	35.0%
!	ATTGTTCCGTATGGTTTTTC+CGG	+	chr8.3:74845208-74845227	MS.gene36820:CDS	35.0%
!	ATTTTCGGCGTTTCATCTAA+CGG	+	chr8.3:74845996-74846015	MS.gene36820:CDS	35.0%
!	CTGAGTCACAGTTCAATTTT+CGG	+	chr8.3:74845981-74846000	MS.gene36820:CDS	35.0%
	AAAACACTATGCAATGCGTG+TGG	+	chr8.3:74845792-74845811	MS.gene36820:CDS	40.0%
	ACATCACCGGAAAAACCATA+CGG	-	chr8.3:74845217-74845236	None:intergenic	40.0%
	CTTCCAGAACATTCCACATT+CGG	-	chr8.3:74845711-74845730	None:intergenic	40.0%
	TTCTTCGATAACAATGTCGC+CGG	+	chr8.3:74845100-74845119	MS.gene36820:CDS	40.0%
!	CACGCATTGCATAGTGTTTT+TGG	-	chr8.3:74845792-74845811	None:intergenic	40.0%
!	CGAAGCATTCGAATTCTCAT+AGG	+	chr8.3:74845883-74845902	MS.gene36820:CDS	40.0%
!!!	CATAGTGTTTTTGGTCCCAT+TGG	-	chr8.3:74845783-74845802	None:intergenic	40.0%
	GAACAATTGTGCCTCCAAAG+CGG	-	chr8.3:74845195-74845214	None:intergenic	45.0%
	GATCCGAATGTGGAATGTTC+TGG	+	chr8.3:74845705-74845724	MS.gene36820:CDS	45.0%
	GATGAAGATTCCGGTGTTTG+CGG	-	chr8.3:74845492-74845511	None:intergenic	45.0%
	GCACAAGATTACTTTGTCGG+TGG	+	chr8.3:74844947-74844966	MS.gene36820:CDS	45.0%
	GGAAGAAAATGTCTCCACTG+CGG	+	chr8.3:74845726-74845745	MS.gene36820:CDS	45.0%
	GGAAGAGTCGGTGAAATTTC+CGG	-	chr8.3:74845122-74845141	None:intergenic	45.0%
	GGAATGGCTTTCGAATTTCG+TGG	+	chr8.3:74845398-74845417	MS.gene36820:CDS	45.0%
	TACTTTGTCGGTGGCTACTA+CGG	+	chr8.3:74844956-74844975	MS.gene36820:CDS	45.0%
	TCCTCACGCTTCTTCACAAT+TGG	-	chr8.3:74845687-74845706	None:intergenic	45.0%
	TCGGTGGAAGATGAAGATTC+CGG	-	chr8.3:74845501-74845520	None:intergenic	45.0%
	TGCTGTTAAACCGCAAACAC+CGG	+	chr8.3:74845479-74845498	MS.gene36820:CDS	45.0%
	TGCTTCGCCGATACAAAAGT+TGG	-	chr8.3:74845870-74845889	None:intergenic	45.0%
	TGTGGTGTGAGGTTTAAGTC+CGG	+	chr8.3:74845810-74845829	MS.gene36820:CDS	45.0%
	TGTTTGCGGTTTAACAGCAC+CGG	-	chr8.3:74845478-74845497	None:intergenic	45.0%
!	GGAGAATGAAGGAAGTGTGT+CGG	-	chr8.3:74845520-74845539	None:intergenic	45.0%
!	GGCGAGTCCAACTTTTGTAT+CGG	+	chr8.3:74845860-74845879	MS.gene36820:CDS	45.0%
!	TCCAATTGTGAAGAAGCGTG+AGG	+	chr8.3:74845683-74845702	MS.gene36820:CDS	45.0%
!!	TTTCCTGGTAGAGGTGTTTC+TGG	-	chr8.3:74845579-74845598	None:intergenic	45.0%
	AAAATGTCTCCACTGCGGCA+CGG	+	chr8.3:74845731-74845750	MS.gene36820:CDS	50.0%
	ACCGTCAGACATAATCGCGT+CGG	-	chr8.3:74845080-74845099	None:intergenic	50.0%
	AGCGGTGACATTGGAAGAGT+CGG	-	chr8.3:74845134-74845153	None:intergenic	50.0%
	AGCGTTACGAGCAGTTTCGT+CGG	-	chr8.3:74845544-74845563	None:intergenic	50.0%
	ATTGGTCCTGTTCTCCACTG+CGG	-	chr8.3:74845765-74845784	None:intergenic	50.0%
	CAGTGGAGAACAGGACCAAT+GGG	+	chr8.3:74845765-74845784	MS.gene36820:CDS	50.0%
	CGAGTTACAGCTGTCAACAG+CGG	-	chr8.3:74845152-74845171	None:intergenic	50.0%
	GAGGTTTAAGTCCGGTAGGT+TGG	+	chr8.3:74845818-74845837	MS.gene36820:CDS	50.0%
	GTGTGAGGTTTAAGTCCGGT+AGG	+	chr8.3:74845814-74845833	MS.gene36820:CDS	50.0%
	GTTGACAGCTGTAACTCGTC+TGG	+	chr8.3:74845154-74845173	MS.gene36820:CDS	50.0%
	GTTTCGTCGGTGGAGAATGA+AGG	-	chr8.3:74845531-74845550	None:intergenic	50.0%
	TACCGGAACACAGAGTTCAC+CGG	-	chr8.3:74845248-74845267	None:intergenic	50.0%
	TATGCAATGCGTGTGGTGTG+AGG	+	chr8.3:74845799-74845818	MS.gene36820:CDS	50.0%
	TCAATGGCGAAAGGCTCACA+CGG	-	chr8.3:74845034-74845053	None:intergenic	50.0%
	TCCGGTGATGTTCAACTCAC+CGG	+	chr8.3:74845226-74845245	MS.gene36820:CDS	50.0%
	TTCGGCGTTTCATCTAACGG+TGG	+	chr8.3:74845999-74846018	MS.gene36820:CDS	50.0%
!	AAGGCTCACACGGTGGTTTT+TGG	-	chr8.3:74845024-74845043	None:intergenic	50.0%
!	ACCGGTGAGTTGAACATCAC+CGG	-	chr8.3:74845230-74845249	None:intergenic	50.0%
!	ATAACTTTTCGGTGGCGCGT+CGG	-	chr8.3:74845664-74845683	None:intergenic	50.0%
!	ATGACATGGCGGAACTGGAA+TGG	+	chr8.3:74845382-74845401	MS.gene36820:CDS	50.0%
!	CTACGTGCTTTTCCTGGTAG+AGG	-	chr8.3:74845588-74845607	None:intergenic	50.0%
!	GAATGAAGGAAGTGTGTCGG+TGG	-	chr8.3:74845517-74845536	None:intergenic	50.0%
!	GGAGGCACAATTGTTCCGTA+TGG	+	chr8.3:74845199-74845218	MS.gene36820:CDS	50.0%
!	GTATGATGACATGGCGGAAC+TGG	+	chr8.3:74845377-74845396	MS.gene36820:intron	50.0%
!	TCTGGTGGTGATAACCGCTT+TGG	+	chr8.3:74845178-74845197	MS.gene36820:CDS	50.0%
!!	CGTTTGCTACGTGCTTTTCC+TGG	-	chr8.3:74845594-74845613	None:intergenic	50.0%
!!	CTGGTAGAGGTGTTTCTGGA+CGG	-	chr8.3:74845575-74845594	None:intergenic	50.0%
	ACAAAAGTTGGACTCGCCGC+CGG	-	chr8.3:74845858-74845877	None:intergenic	55.0%
	ATACTCCGGCACCAACCTAC+CGG	-	chr8.3:74845832-74845851	None:intergenic	55.0%
	CACCGGTGAACTCTGTGTTC+CGG	+	chr8.3:74845243-74845262	MS.gene36820:CDS	55.0%
	CGGCGAAAACCAATTCTCGC+CGG	+	chr8.3:74844982-74845001	MS.gene36820:CDS	55.0%
	CGTCCAGAAACACCTCTACC+AGG	+	chr8.3:74845573-74845592	MS.gene36820:CDS	55.0%
	GAAGCGTGAGGATCCGAATG+TGG	+	chr8.3:74845695-74845714	MS.gene36820:CDS	55.0%
	GCAGTGGAGAACAGGACCAA+TGG	+	chr8.3:74845764-74845783	MS.gene36820:CDS	55.0%
	GCCGACGCGATTATGTCTGA+CGG	+	chr8.3:74845076-74845095	MS.gene36820:CDS	55.0%
	GCTGTCAACAGCGGTGACAT+TGG	-	chr8.3:74845143-74845162	None:intergenic	55.0%
	GGTGGTGATAACCGCTTTGG+AGG	+	chr8.3:74845181-74845200	MS.gene36820:CDS	55.0%
	GTTACGAGCAGTTTCGTCGG+TGG	-	chr8.3:74845541-74845560	None:intergenic	55.0%
!	AGCTGTAACTCGTCTGGCTC+TGG	+	chr8.3:74845160-74845179	MS.gene36820:CDS	55.0%
!	TAACTTTTCGGTGGCGCGTC+GGG	-	chr8.3:74845663-74845682	None:intergenic	55.0%
!!	TAAGTCCGGTAGGTTGGTGC+CGG	+	chr8.3:74845824-74845843	MS.gene36820:CDS	55.0%
!!	TGTAACTCGTCTGGCTCTGG+TGG	+	chr8.3:74845163-74845182	MS.gene36820:CDS	55.0%
!!!	CGGCGAGAATTGGTTTTCGC+CGG	-	chr8.3:74844984-74845003	None:intergenic	55.0%
	AAACGTTCACGCGCTGCTCC+AGG	+	chr8.3:74845609-74845628	MS.gene36820:CDS	60.0%
	AAGACGCCGCAGTGGAGAAC+AGG	+	chr8.3:74845756-74845775	MS.gene36820:CDS	60.0%
	ATGGCGAAAGGCTCACACGG+TGG	-	chr8.3:74845031-74845050	None:intergenic	60.0%
	GACGCTTCTCCGGCGAGAAT+TGG	-	chr8.3:74844994-74845013	None:intergenic	60.0%
	TGGTCACCGTGACGCTTCTC+CGG	-	chr8.3:74845004-74845023	None:intergenic	60.0%
	TTGCAACTTCTCTCCGGCGC+CGG	+	chr8.3:74845456-74845475	MS.gene36820:CDS	60.0%
!	AACTTTTCGGTGGCGCGTCG+GGG	-	chr8.3:74845662-74845681	None:intergenic	60.0%
!!	GTTGGTGCCGGAGTATCGAC+CGG	+	chr8.3:74845836-74845855	MS.gene36820:CDS	60.0%
!!	TTCTCGCCGGAGAAGCGTCA+CGG	+	chr8.3:74844995-74845014	MS.gene36820:CDS	60.0%
	GCACGGATAAGACGCCGCAG+TGG	+	chr8.3:74845748-74845767	MS.gene36820:CDS	65.0%
	GCGCGTCGGGGAGATGTAGT+AGG	-	chr8.3:74845650-74845669	None:intergenic	65.0%
	GCGTCTTATCCGTGCCGCAG+TGG	-	chr8.3:74845743-74845762	None:intergenic	65.0%
	GGGGAGATGTAGTAGGCGCG+TGG	-	chr8.3:74845643-74845662	None:intergenic	65.0%
	GTCGGTGGCTACTACGGTGC+CGG	+	chr8.3:74844962-74844981	MS.gene36820:CDS	65.0%
!!	CGGTTTAACAGCACCGGCGC+CGG	-	chr8.3:74845472-74845491	None:intergenic	65.0%
	AGGCGCGTGGACCAGTCTCC+TGG	-	chr8.3:74845630-74845649	None:intergenic	70.0%
	CACGCGCTGCTCCAGGAGAC+TGG	+	chr8.3:74845616-74845635	MS.gene36820:CDS	70.0%
	CTCGCCGCCGGTCGATACTC+CGG	-	chr8.3:74845846-74845865	None:intergenic	70.0%
!!	GGTGCCGGAGTATCGACCGG+CGG	+	chr8.3:74845839-74845858	MS.gene36820:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	74844941	74846079	74844941	ID=MS.gene36820
chr8.3	mRNA	74844941	74846079	74844941	ID=MS.gene36820.t1;Parent=MS.gene36820
chr8.3	exon	74844941	74845264	74844941	ID=MS.gene36820.t1.exon1;Parent=MS.gene36820.t1
chr8.3	CDS	74844941	74845264	74844941	ID=cds.MS.gene36820.t1;Parent=MS.gene36820.t1
chr8.3	exon	74845378	74846079	74845378	ID=MS.gene36820.t1.exon2;Parent=MS.gene36820.t1
chr8.3	CDS	74845378	74846079	74845378	ID=cds.MS.gene36820.t1;Parent=MS.gene36820.t1

Gene Sequence

>MS.gene36820

ATGGAAGCACAAGATTACTTTGTCGGTGGCTACTACGGTGCCGGCGAAAACCAATTCTCGCCGGAGAAGCGTCACGGTGACCAAAAACCACCGTGTGAGCCTTTCGCCATTGATGATTTACTTGATTTTTCAAATGCCGACGCGATTATGTCTGACGGTTTCTTCGATAACAATGTCGCCGGAAATTTCACCGACTCTTCCAATGTCACCGCTGTTGACAGCTGTAACTCGTCTGGCTCTGGTGGTGATAACCGCTTTGGAGGCACAATTGTTCCGTATGGTTTTTCCGGTGATGTTCAACTCACCGGTGAACTCTGTGTTCCGGTAAGTAATAATGTCACTAATTCAGCTTAATTTAACCGTAATTGAAGATAATTGAAGTTCAATTTCGAATTTAAATTATGAAACTGAATTTGAATTTTCTCTGAATTTCATAGTATGATGACATGGCGGAACTGGAATGGCTTTCGAATTTCGTGGAAGATTCATACTCCGCTGAAGAAGAATTGAAAACATTGCAACTTCTCTCCGGCGCCGGTGCTGTTAAACCGCAAACACCGGAATCTTCATCTTCCACCGACACACTTCCTTCATTCTCCACCGACGAAACTGCTCGTAACGCTTCATTTCTCCGTCCAGAAACACCTCTACCAGGAAAAGCACGTAGCAAACGTTCACGCGCTGCTCCAGGAGACTGGTCCACGCGCCTACTACATCTCCCCGACGCGCCACCGAAAAGTTATCCAATTGTGAAGAAGCGTGAGGATCCGAATGTGGAATGTTCTGGAAGAAAATGTCTCCACTGCGGCACGGATAAGACGCCGCAGTGGAGAACAGGACCAATGGGACCAAAAACACTATGCAATGCGTGTGGTGTGAGGTTTAAGTCCGGTAGGTTGGTGCCGGAGTATCGACCGGCGGCGAGTCCAACTTTTGTATCGGCGAAGCATTCGAATTCTCATAGGAAAGTTTTGGAACTTCGAAGACAGAAAGAGATGCAAAGATCATCACAGCATCATCATCATCATCAACAACAGCTTCTGAGTCACAGTTCAATTTTCGGCGTTTCATCTAACGGTGGAGATGATTTCATCAATTATCATCATCATTGTGGGCCAGAGTTTAGACATGTTATCTAG

Protein sequence

>MS.gene36820.t1

MEAQDYFVGGYYGAGENQFSPEKRHGDQKPPCEPFAIDDLLDFSNADAIMSDGFFDNNVAGNFTDSSNVTAVDSCNSSGSGGDNRFGGTIVPYGFSGDVQLTGELCVPYDDMAELEWLSNFVEDSYSAEEELKTLQLLSGAGAVKPQTPESSSSTDTLPSFSTDETARNASFLRPETPLPGKARSKRSRAAPGDWSTRLLHLPDAPPKSYPIVKKREDPNVECSGRKCLHCGTDKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVSAKHSNSHRKVLELRRQKEMQRSSQHHHHHQQQLLSHSSIFGVSSNGGDDFINYHHHCGPEFRHVI