Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37909.t1 | XP_003616932.3 | 100 | 248 | 0 | 0 | 1 | 248 | 65 | 312 | 3.80E-138 | 500.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37909.t1 | P46608 | 68.2 | 255 | 69 | 6 | 1 | 247 | 129 | 379 | 3.0e-91 | 336.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37909.t1 | D4NXR4 | 100.0 | 248 | 0 | 0 | 1 | 248 | 51 | 298 | 2.7e-138 | 500.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene37909.t1 | TF | HB-KNOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050020 | MS.gene37909 | 0.824188 | 9.24E-54 | -1.69E-46 |
| MS.gene050298 | MS.gene37909 | 0.817591 | 3.05E-52 | -1.69E-46 |
| MS.gene050563 | MS.gene37909 | 0.914153 | 2.68E-84 | -1.69E-46 |
| MS.gene050584 | MS.gene37909 | 0.845601 | 3.67E-59 | -1.69E-46 |
| MS.gene050585 | MS.gene37909 | 0.84277 | 2.11E-58 | -1.69E-46 |
| MS.gene050587 | MS.gene37909 | 0.828798 | 7.36E-55 | -1.69E-46 |
| MS.gene05143 | MS.gene37909 | 0.807 | 6.26E-50 | -1.69E-46 |
| MS.gene051789 | MS.gene37909 | 0.823588 | 1.28E-53 | -1.69E-46 |
| MS.gene052142 | MS.gene37909 | 0.853699 | 2.01E-61 | -1.69E-46 |
| MS.gene052698 | MS.gene37909 | 0.835082 | 2.06E-56 | -1.69E-46 |
| MS.gene053074 | MS.gene37909 | 0.80859 | 2.87E-50 | -1.69E-46 |
| MS.gene053383 | MS.gene37909 | 0.904958 | 7.12E-80 | -1.69E-46 |
| MS.gene053563 | MS.gene37909 | 0.809166 | 2.16E-50 | -1.69E-46 |
| MS.gene05456 | MS.gene37909 | 0.885482 | 7.83E-72 | -1.69E-46 |
| MS.gene055359 | MS.gene37909 | 0.884923 | 1.27E-71 | -1.69E-46 |
| MS.gene057022 | MS.gene37909 | 0.802321 | 5.93E-49 | -1.69E-46 |
| MS.gene058918 | MS.gene37909 | 0.836905 | 7.11E-57 | -1.69E-46 |
| MS.gene059006 | MS.gene37909 | 0.861376 | 1.07E-63 | -1.69E-46 |
| MS.gene059768 | MS.gene37909 | 0.86623 | 3.32E-65 | -1.69E-46 |
| MS.gene060513 | MS.gene37909 | 0.822467 | 2.33E-53 | -1.69E-46 |
| MS.gene060691 | MS.gene37909 | 0.858644 | 7.15E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37909.t1 | MTR_5g085860 | 100.000 | 248 | 0 | 0 | 1 | 248 | 51 | 298 | 0.0 | 520 |
| MS.gene37909.t1 | MTR_2g024390 | 65.873 | 252 | 71 | 4 | 1 | 242 | 122 | 368 | 3.18e-108 | 317 |
| MS.gene37909.t1 | MTR_5g033720 | 54.274 | 234 | 92 | 4 | 2 | 225 | 78 | 306 | 1.16e-76 | 234 |
| MS.gene37909.t1 | MTR_1g017080 | 55.508 | 236 | 91 | 3 | 1 | 226 | 124 | 355 | 5.22e-75 | 233 |
| MS.gene37909.t1 | MTR_1g084060 | 49.590 | 244 | 98 | 4 | 2 | 228 | 25 | 260 | 1.50e-72 | 223 |
| MS.gene37909.t1 | MTR_1g084060 | 49.590 | 244 | 98 | 4 | 2 | 228 | 25 | 260 | 3.31e-72 | 223 |
| MS.gene37909.t1 | MTR_2g461240 | 30.894 | 246 | 132 | 4 | 1 | 213 | 99 | 339 | 5.22e-34 | 125 |
| MS.gene37909.t1 | MTR_3g106400 | 29.388 | 245 | 141 | 4 | 1 | 213 | 111 | 355 | 8.97e-34 | 125 |
| MS.gene37909.t1 | MTR_3g106400 | 29.388 | 245 | 141 | 4 | 1 | 213 | 111 | 355 | 9.23e-34 | 125 |
| MS.gene37909.t1 | MTR_1g012960 | 31.276 | 243 | 137 | 4 | 1 | 213 | 178 | 420 | 9.70e-34 | 126 |
| MS.gene37909.t1 | MTR_3g106400 | 29.388 | 245 | 141 | 4 | 1 | 213 | 111 | 355 | 1.83e-33 | 125 |
| MS.gene37909.t1 | MTR_5g011070 | 31.967 | 244 | 134 | 5 | 2 | 213 | 33 | 276 | 3.04e-32 | 120 |
| MS.gene37909.t1 | MTR_4g116545 | 31.600 | 250 | 125 | 8 | 1 | 213 | 75 | 315 | 1.27e-29 | 113 |
| MS.gene37909.t1 | MTR_4g116545 | 31.600 | 250 | 125 | 8 | 1 | 213 | 75 | 315 | 1.30e-29 | 114 |
| MS.gene37909.t1 | MTR_8g078480 | 39.394 | 99 | 53 | 4 | 126 | 219 | 546 | 642 | 3.65e-12 | 66.2 |
| MS.gene37909.t1 | MTR_5g018860 | 39.362 | 94 | 51 | 3 | 126 | 215 | 494 | 585 | 4.87e-12 | 65.9 |
| MS.gene37909.t1 | MTR_3g112300 | 35.135 | 111 | 60 | 3 | 111 | 215 | 302 | 406 | 5.81e-11 | 62.4 |
| MS.gene37909.t1 | MTR_3g112300 | 35.135 | 111 | 60 | 3 | 111 | 215 | 302 | 406 | 8.94e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37909.t1 | AT1G62360 | 66.148 | 257 | 69 | 4 | 1 | 244 | 126 | 377 | 4.06e-107 | 315 |
| MS.gene37909.t1 | AT4G08150 | 55.187 | 241 | 93 | 3 | 1 | 229 | 139 | 376 | 6.37e-77 | 238 |
| MS.gene37909.t1 | AT1G23380 | 52.361 | 233 | 100 | 4 | 3 | 228 | 92 | 320 | 2.80e-74 | 229 |
| MS.gene37909.t1 | AT1G70510 | 51.064 | 235 | 102 | 3 | 2 | 228 | 75 | 304 | 1.28e-73 | 227 |
| MS.gene37909.t1 | AT1G23380 | 51.915 | 235 | 100 | 5 | 3 | 228 | 92 | 322 | 2.89e-72 | 224 |
| MS.gene37909.t1 | AT1G70510 | 50.209 | 239 | 102 | 4 | 2 | 228 | 75 | 308 | 2.32e-71 | 221 |
| MS.gene37909.t1 | AT5G25220 | 30.833 | 240 | 139 | 5 | 1 | 213 | 164 | 403 | 1.63e-35 | 131 |
| MS.gene37909.t1 | AT5G25220 | 30.833 | 240 | 139 | 5 | 1 | 213 | 164 | 403 | 2.06e-35 | 130 |
| MS.gene37909.t1 | AT5G11060 | 35.366 | 246 | 120 | 9 | 1 | 213 | 128 | 367 | 6.57e-35 | 129 |
| MS.gene37909.t1 | AT1G62990 | 30.081 | 246 | 133 | 5 | 2 | 213 | 35 | 275 | 8.23e-34 | 124 |
| MS.gene37909.t1 | AT4G32040 | 27.935 | 247 | 137 | 6 | 1 | 213 | 123 | 362 | 2.04e-29 | 114 |
| MS.gene37909.t1 | AT4G32040 | 27.935 | 247 | 137 | 6 | 1 | 213 | 123 | 362 | 2.27e-29 | 114 |
| MS.gene37909.t1 | AT4G36870 | 37.234 | 94 | 53 | 3 | 126 | 215 | 468 | 559 | 1.89e-11 | 63.9 |
| MS.gene37909.t1 | AT4G36870 | 37.234 | 94 | 53 | 3 | 126 | 215 | 468 | 559 | 1.89e-11 | 63.9 |
| MS.gene37909.t1 | AT2G23760 | 37.234 | 94 | 53 | 3 | 126 | 215 | 394 | 485 | 2.63e-11 | 63.5 |
| MS.gene37909.t1 | AT2G23760 | 37.234 | 94 | 53 | 3 | 126 | 215 | 394 | 485 | 2.63e-11 | 63.5 |
| MS.gene37909.t1 | AT2G23760 | 37.234 | 94 | 53 | 3 | 126 | 215 | 394 | 485 | 2.63e-11 | 63.5 |
| MS.gene37909.t1 | AT2G27990 | 50.909 | 55 | 27 | 0 | 161 | 215 | 431 | 485 | 8.06e-11 | 62.0 |
| MS.gene37909.t1 | AT1G14760 | 33.962 | 106 | 57 | 3 | 2 | 102 | 39 | 136 | 8.08e-11 | 58.9 |
| MS.gene37909.t1 | AT5G41410 | 40.698 | 86 | 43 | 2 | 161 | 240 | 398 | 481 | 8.34e-11 | 62.0 |
Find 56 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTGCAAGTGCTTGCTTT+TGG | 0.251155 | 5.3:+69465457 | None:intergenic |
| TGTTGATCTGCTTCAAATCT+AGG | 0.290613 | 5.3:+69465427 | None:intergenic |
| GAAATATTGAATGGCTCTTC+AGG | 0.317305 | 5.3:-69468785 | MS.gene37909:CDS |
| CTCTTACCTCAATTGCTTGA+AGG | 0.355056 | 5.3:-69469166 | MS.gene37909:intron |
| TCTAAGCTAGCCACCACTTC+AGG | 0.359706 | 5.3:+69468827 | None:intergenic |
| CTCGACAGCAACTGCTTGAT+TGG | 0.373189 | 5.3:-69466338 | MS.gene37909:CDS |
| CTTCACCTTGAGTAGTATCT+AGG | 0.374756 | 5.3:+69466466 | None:intergenic |
| TCCAGGTTTGGATCAGTTCA+TGG | 0.403203 | 5.3:-69468726 | MS.gene37909:CDS |
| TGAAGTGGTGGCTAGCTTAG+AGG | 0.404107 | 5.3:-69468825 | MS.gene37909:CDS |
| GAAAAGCATGGCTTCTTTGA+AGG | 0.406625 | 5.3:+69468655 | None:intergenic |
| AGTTGCTGTCGAGCTTCCTT+TGG | 0.427416 | 5.3:+69466348 | None:intergenic |
| CGCAAGTATAGTGGATATCT+AGG | 0.434219 | 5.3:-69466417 | MS.gene37909:CDS |
| TACTACTCAAGGTGAAGATC+AGG | 0.439850 | 5.3:-69466460 | MS.gene37909:CDS |
| GGCATAGCATCCATAGGAAA+TGG | 0.441925 | 5.3:+69465300 | None:intergenic |
| AACTGCTTGATTGGTGGAGC+AGG | 0.454588 | 5.3:-69466329 | MS.gene37909:CDS |
| TATAGGTGAAGATCCAGGTT+TGG | 0.460482 | 5.3:-69468738 | MS.gene37909:CDS |
| AAACAGCAACAGCCTTGAGC+TGG | 0.471517 | 5.3:+69468615 | None:intergenic |
| GGAAGTAGTAGTTCTTGTAT+AGG | 0.474614 | 5.3:-69468755 | MS.gene37909:CDS |
| ATTTGAAGCAGATCAACAAT+TGG | 0.483386 | 5.3:-69465422 | MS.gene37909:CDS |
| TCAGGACCTTCAAGCAATTG+AGG | 0.486076 | 5.3:+69469160 | None:intergenic |
| GTTGCTGTTTCAACTGACTT+TGG | 0.488737 | 5.3:-69468602 | MS.gene37909:intron |
| CAGCTTCTACGCAAGTATAG+TGG | 0.489736 | 5.3:-69466426 | MS.gene37909:CDS |
| GACAGCAACTGCTTGATTGG+TGG | 0.502008 | 5.3:-69466335 | MS.gene37909:CDS |
| AAAAGCATGGCTTCTTTGAA+GGG | 0.505700 | 5.3:+69468656 | None:intergenic |
| GGATATGCAATTTGCTGTGA+TGG | 0.523714 | 5.3:-69465361 | MS.gene37909:CDS |
| GGTGGAGCAGGCATTACAAA+TGG | 0.526535 | 5.3:-69466317 | MS.gene37909:CDS |
| TCCATGAACTGATCCAAACC+TGG | 0.528067 | 5.3:+69468725 | None:intergenic |
| AGAATAGTTACCGATGGGTA+AGG | 0.537725 | 5.3:+69466294 | None:intergenic |
| CTTCAAGCAATTGAGGTAAG+AGG | 0.538407 | 5.3:+69469167 | None:intergenic |
| TCTTGTATAGGTGAAGATCC+AGG | 0.538996 | 5.3:-69468743 | MS.gene37909:CDS |
| AATGGCTCTTCAGGAAGGAC+AGG | 0.539828 | 5.3:-69468776 | MS.gene37909:CDS |
| GACAAGAGACGAGGAAAGAG+AGG | 0.541929 | 5.3:+69469189 | None:intergenic |
| GCTGGGACTCAATTCTTGAA+AGG | 0.547018 | 5.3:+69468633 | None:intergenic |
| AAGAATTGAGTCCCAGCTCA+AGG | 0.557368 | 5.3:-69468627 | MS.gene37909:CDS |
| AACAGCAACAGCCTTGAGCT+GGG | 0.567696 | 5.3:+69468616 | None:intergenic |
| AATTCTTGAAAGGAAAAGCA+TGG | 0.577216 | 5.3:+69468643 | None:intergenic |
| TTAATGTGCTAAAGAAGCAT+AGG | 0.578609 | 5.3:+69465279 | None:intergenic |
| TTAATCAGAGAAAACGCCAC+TGG | 0.580206 | 5.3:-69465395 | MS.gene37909:CDS |
| GGATGCCACAAATTACTACA+TGG | 0.582043 | 5.3:-69465340 | MS.gene37909:CDS |
| GATGTGCAAGCCATTTCCTA+TGG | 0.586987 | 5.3:-69465310 | MS.gene37909:CDS |
| GGTTGGAGCACCTCCTGAAG+TGG | 0.595718 | 5.3:-69468840 | MS.gene37909:CDS |
| CAAGCACTTGCAGAATCCAC+AGG | 0.600586 | 5.3:-69465450 | MS.gene37909:CDS |
| GCAAAATGTGAAATATTGAA+TGG | 0.601951 | 5.3:-69468794 | MS.gene37909:CDS |
| TTACAAATGGCCTTACCCAT+CGG | 0.606989 | 5.3:-69466304 | MS.gene37909:intron |
| TGGAGCACCTCCTGAAGTGG+TGG | 0.608141 | 5.3:-69468837 | MS.gene37909:CDS |
| CTGCTTCAAATCTAGGCCTG+TGG | 0.610652 | 5.3:+69465434 | None:intergenic |
| TATTGAATGGCTCTTCAGGA+AGG | 0.613053 | 5.3:-69468781 | MS.gene37909:CDS |
| GCAAATTGCATATCCTCAGA+AGG | 0.614720 | 5.3:+69465369 | None:intergenic |
| ACGCCACTGGAAGCCTTCTG+AGG | 0.619253 | 5.3:-69465382 | MS.gene37909:CDS |
| AGCATAGGCATAGCATCCAT+AGG | 0.634428 | 5.3:+69465294 | None:intergenic |
| AAAGAATGGAAAGTTACCAA+AGG | 0.641055 | 5.3:-69466364 | MS.gene37909:CDS |
| AAGCTAGCCACCACTTCAGG+AGG | 0.647427 | 5.3:+69468830 | None:intergenic |
| AACAACCTAGATACTACTCA+AGG | 0.648557 | 5.3:-69466471 | MS.gene37909:CDS |
| TATCCTCAGAAGGCTTCCAG+TGG | 0.672824 | 5.3:+69465379 | None:intergenic |
| AGGTAAGAGGACAAGAGACG+AGG | 0.679022 | 5.3:+69469180 | None:intergenic |
| AGGTTTGGATCAGTTCATGG+AGG | 0.735955 | 5.3:-69468723 | MS.gene37909:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAATAAATATTTTTTA+AGG | + | chr5.3:69467891-69467910 | None:intergenic | 0.0% |
| !! | ATGAAGATAATATAATTTAA+GGG | + | chr5.3:69465915-69465934 | None:intergenic | 10.0% |
| !! | ATTATATTGAAATTAACAAA+TGG | + | chr5.3:69467210-69467229 | None:intergenic | 10.0% |
| !! | TTCTTTAATTAAATTAAACT+TGG | - | chr5.3:69466791-69466810 | MS.gene37909:intron | 10.0% |
| !!! | AATAGTTTTTTTTTTCTTTA+AGG | + | chr5.3:69468468-69468487 | None:intergenic | 10.0% |
| !!! | GATTTTTTTTTTAAACTTTA+TGG | - | chr5.3:69465569-69465588 | MS.gene37909:intron | 10.0% |
| !! | AAACTTTAAATATTGTCATT+AGG | + | chr5.3:69468538-69468557 | None:intergenic | 15.0% |
| !! | CATGAAGATAATATAATTTA+AGG | + | chr5.3:69465916-69465935 | None:intergenic | 15.0% |
| !! | TATTTACTTACGATAAAAAA+GGG | + | chr5.3:69466196-69466215 | None:intergenic | 15.0% |
| !! | TTGTGAAATATTTATGTATT+TGG | + | chr5.3:69467308-69467327 | None:intergenic | 15.0% |
| !! | TTTGTGAATTATTTGTAATT+AGG | - | chr5.3:69468497-69468516 | MS.gene37909:intron | 15.0% |
| !!! | AAGTAAATATTCATTTTAAC+TGG | - | chr5.3:69465969-69465988 | MS.gene37909:intron | 15.0% |
| !!! | ATTATTCTTTTATCAAATGT+AGG | - | chr5.3:69467435-69467454 | MS.gene37909:intron | 15.0% |
| !!! | ATTTTAGAATTTAAAAGATC+AGG | - | chr5.3:69468805-69468824 | MS.gene37909:CDS | 15.0% |
| !!! | TATAATTTTTTTGCACAAAT+GGG | - | chr5.3:69466538-69466557 | MS.gene37909:intron | 15.0% |
| !!! | TTATTCTTTTATCAAATGTA+GGG | - | chr5.3:69467436-69467455 | MS.gene37909:intron | 15.0% |
| !!! | TTTAGAGTTTTTCATATAAT+AGG | - | chr5.3:69468359-69468378 | MS.gene37909:intron | 15.0% |
| !! | AAATAAATTATCGCAATCAT+AGG | + | chr5.3:69468852-69468871 | None:intergenic | 20.0% |
| !! | AACAATTGCCTATAAAAAAA+GGG | + | chr5.3:69467666-69467685 | None:intergenic | 20.0% |
| !! | AAGTTTAATTCTCAAAACTA+AGG | - | chr5.3:69466876-69466895 | MS.gene37909:intron | 20.0% |
| !! | AATGAAACCTTAATATCAAA+TGG | - | chr5.3:69468952-69468971 | MS.gene37909:intron | 20.0% |
| !! | ACATAAATATTTCACAACTT+GGG | - | chr5.3:69467311-69467330 | MS.gene37909:intron | 20.0% |
| !! | ATAAATCATTGACATATTCA+AGG | + | chr5.3:69468414-69468433 | None:intergenic | 20.0% |
| !! | CTATTTACTTACGATAAAAA+AGG | + | chr5.3:69466197-69466216 | None:intergenic | 20.0% |
| !! | TAACAATTGCCTATAAAAAA+AGG | + | chr5.3:69467667-69467686 | None:intergenic | 20.0% |
| !! | TACATAAATATTTCACAACT+TGG | - | chr5.3:69467310-69467329 | MS.gene37909:intron | 20.0% |
| !! | TAGAAAAGAGAAAAAAAGAA+TGG | - | chr5.3:69466045-69466064 | MS.gene37909:intron | 20.0% |
| !! | TAGTTTAGTAAATTGTTAGA+GGG | - | chr5.3:69467685-69467704 | MS.gene37909:intron | 20.0% |
| !! | TATCTTGATTTATAGCATTT+AGG | - | chr5.3:69468308-69468327 | MS.gene37909:intron | 20.0% |
| !! | TTAGTTTAGTAAATTGTTAG+AGG | - | chr5.3:69467684-69467703 | MS.gene37909:intron | 20.0% |
| !!! | AATGTTAATAAACTTTTCCA+AGG | + | chr5.3:69465947-69465966 | None:intergenic | 20.0% |
| !!! | AATTAAGTAAAATGAGGTTT+TGG | - | chr5.3:69466336-69466355 | MS.gene37909:CDS | 20.0% |
| !!! | AGTTTCTGATGTTTTAAATA+AGG | + | chr5.3:69468702-69468721 | None:intergenic | 20.0% |
| !!! | ATTCTTTTTTTCTCTTTTCT+AGG | + | chr5.3:69466046-69466065 | None:intergenic | 20.0% |
| !!! | GTATAATTTTTTTGCACAAA+TGG | - | chr5.3:69466537-69466556 | MS.gene37909:intron | 20.0% |
| !!! | GTTTCTGATGTTTTAAATAA+GGG | + | chr5.3:69468701-69468720 | None:intergenic | 20.0% |
| !!! | TAAATTAAACTTGGTGAAAA+AGG | - | chr5.3:69466800-69466819 | MS.gene37909:intron | 20.0% |
| !!! | TACTGATTATTTTAACGTTA+GGG | - | chr5.3:69468726-69468745 | MS.gene37909:CDS | 20.0% |
| !!! | TATGTCTAAAGTAATTTACA+TGG | - | chr5.3:69466493-69466512 | MS.gene37909:CDS | 20.0% |
| !!! | TTGAAATTGTGTTTTTAACA+TGG | - | chr5.3:69466253-69466272 | MS.gene37909:intron | 20.0% |
| !!! | TTTAGGTTTGATTATTTTGA+AGG | - | chr5.3:69468325-69468344 | MS.gene37909:intron | 20.0% |
| !!! | TTTTTGAAGAAGAAAAAGAA+TGG | - | chr5.3:69468107-69468126 | MS.gene37909:intron | 20.0% |
| ! | AAACTAAACTACTACAAAAG+AGG | + | chr5.3:69466936-69466955 | None:intergenic | 25.0% |
| ! | AAACTAATAAATGTCTAGTC+AGG | + | chr5.3:69467834-69467853 | None:intergenic | 25.0% |
| ! | AAATGATAGATTACTTCGTA+TGG | - | chr5.3:69466310-69466329 | MS.gene37909:CDS | 25.0% |
| ! | AACAAAATTGAACATAACCA+AGG | + | chr5.3:69466658-69466677 | None:intergenic | 25.0% |
| ! | AACTAAACTACTACAAAAGA+GGG | + | chr5.3:69466935-69466954 | None:intergenic | 25.0% |
| ! | AATGATAGATTACTTCGTAT+GGG | - | chr5.3:69466311-69466330 | MS.gene37909:CDS | 25.0% |
| ! | ACAATTGCCTATAAAAAAAG+GGG | + | chr5.3:69467665-69467684 | None:intergenic | 25.0% |
| ! | ACTTTATAGAGAACGAATTA+AGG | + | chr5.3:69466860-69466879 | None:intergenic | 25.0% |
| ! | AGTTCTTTCCTATCATTAAA+TGG | + | chr5.3:69467133-69467152 | None:intergenic | 25.0% |
| ! | AGTTTAGTAAATTGTTAGAG+GGG | - | chr5.3:69467686-69467705 | MS.gene37909:intron | 25.0% |
| ! | ATAAATATTTCACAACTTGG+GGG | - | chr5.3:69467313-69467332 | MS.gene37909:intron | 25.0% |
| ! | ATTCCTTAACTTCATTTACA+TGG | - | chr5.3:69466741-69466760 | MS.gene37909:intron | 25.0% |
| ! | CATAAATATTTCACAACTTG+GGG | - | chr5.3:69467312-69467331 | MS.gene37909:intron | 25.0% |
| ! | CTTCTTCATTAAGAATCTTA+TGG | - | chr5.3:69467374-69467393 | MS.gene37909:intron | 25.0% |
| ! | GAAAAACTCTAAATTGTTCA+GGG | + | chr5.3:69468352-69468371 | None:intergenic | 25.0% |
| ! | GCAAAATGTGAAATATTGAA+TGG | - | chr5.3:69465691-69465710 | MS.gene37909:intron | 25.0% |
| ! | GGGAATTTGAATAAAAATTG+AGG | + | chr5.3:69466572-69466591 | None:intergenic | 25.0% |
| ! | GTATTAGCCATTTGATATTA+AGG | + | chr5.3:69468962-69468981 | None:intergenic | 25.0% |
| ! | GTTCTTTCCTATCATTAAAT+GGG | + | chr5.3:69467132-69467151 | None:intergenic | 25.0% |
| ! | TAAGATTCTTAATGAAGAAG+TGG | + | chr5.3:69467374-69467393 | None:intergenic | 25.0% |
| ! | TAAGTGCAATTAGTAACATT+TGG | - | chr5.3:69467604-69467623 | MS.gene37909:intron | 25.0% |
| ! | TCAATGTTCATAATCATATC+TGG | - | chr5.3:69468282-69468301 | MS.gene37909:intron | 25.0% |
| ! | TCTTCAAAAACTCTTTCTTA+AGG | + | chr5.3:69468097-69468116 | None:intergenic | 25.0% |
| ! | TGAAAAACTCTAAATTGTTC+AGG | + | chr5.3:69468353-69468372 | None:intergenic | 25.0% |
| ! | TGTAATTAGGTACGAAATTT+AGG | - | chr5.3:69468510-69468529 | MS.gene37909:intron | 25.0% |
| ! | TTAAAAGTAAGCTCAAATGA+TGG | - | chr5.3:69467274-69467293 | MS.gene37909:intron | 25.0% |
| ! | TTTAGTACATTAGTTGTTGT+TGG | - | chr5.3:69467531-69467550 | MS.gene37909:intron | 25.0% |
| !! | AAATGTAGTAAGTATTGCAT+TGG | + | chr5.3:69468639-69468658 | None:intergenic | 25.0% |
| !! | AGGTAAATTTTTCATTTGCA+TGG | - | chr5.3:69466896-69466915 | MS.gene37909:intron | 25.0% |
| !! | ATAAACTTTTCCAAGGATAA+TGG | + | chr5.3:69465940-69465959 | None:intergenic | 25.0% |
| !! | ATTTTCCATGTAGTAATTTG+TGG | + | chr5.3:69469153-69469172 | None:intergenic | 25.0% |
| !! | TCTCAAAAACAAACATTTTG+TGG | + | chr5.3:69465551-69465570 | None:intergenic | 25.0% |
| !! | TTCTCTTTTCTAGGTTTTTA+GGG | + | chr5.3:69466037-69466056 | None:intergenic | 25.0% |
| !! | TTTCTCTTTTCTAGGTTTTT+AGG | + | chr5.3:69466038-69466057 | None:intergenic | 25.0% |
| !!! | AAATGCTTCATTTTTACACA+TGG | - | chr5.3:69467236-69467255 | MS.gene37909:intron | 25.0% |
| !!! | AATGCTTCATTTTTACACAT+GGG | - | chr5.3:69467237-69467256 | MS.gene37909:intron | 25.0% |
| !!! | CTACTGATTATTTTAACGTT+AGG | - | chr5.3:69468725-69468744 | MS.gene37909:CDS | 25.0% |
| !!! | TAGTGTGATTAGAGTTTTAA+AGG | - | chr5.3:69466214-69466233 | MS.gene37909:intron | 25.0% |
| !!! | TTTAAGTGTGATTTTTTTGC+AGG | - | chr5.3:69465624-69465643 | MS.gene37909:intron | 25.0% |
| AAAAATGCCTTCAAAACATC+CGG | + | chr5.3:69466615-69466634 | None:intergenic | 30.0% | |
| AAAGAATGGAAAGTTACCAA+AGG | - | chr5.3:69468121-69468140 | MS.gene37909:intron | 30.0% | |
| AAATCCATCAAGATTGCATT+GGG | + | chr5.3:69466592-69466611 | None:intergenic | 30.0% | |
| AATTCTTGAAAGGAAAAGCA+TGG | + | chr5.3:69465845-69465864 | None:intergenic | 30.0% | |
| ACCCATATGAAAATCAACTA+AGG | + | chr5.3:69466995-69467014 | None:intergenic | 30.0% | |
| ATGATAGATTACTTCGTATG+GGG | - | chr5.3:69466312-69466331 | MS.gene37909:CDS | 30.0% | |
| ATGATATTCACACAAACACT+AGG | + | chr5.3:69466688-69466707 | None:intergenic | 30.0% | |
| GAACCATGTAAATGAAGTTA+AGG | + | chr5.3:69466747-69466766 | None:intergenic | 30.0% | |
| TAAATTATCGCAATCATAGG+AGG | + | chr5.3:69468849-69468868 | None:intergenic | 30.0% | |
| TGAAAGTCCCATTTAATGAT+AGG | - | chr5.3:69467122-69467141 | MS.gene37909:intron | 30.0% | |
| TGGGGAAATTAAGTAAAATG+AGG | - | chr5.3:69466330-69466349 | MS.gene37909:CDS | 30.0% | |
| TTAAGGAAAACATACGACAT+AGG | + | chr5.3:69466843-69466862 | None:intergenic | 30.0% | |
| TTCGAGATCAAAAACATTAG+AGG | - | chr5.3:69468751-69468770 | MS.gene37909:CDS | 30.0% | |
| TTGAACTAGGTTAAAAGGTT+TGG | - | chr5.3:69466287-69466306 | MS.gene37909:intron | 30.0% | |
| TTGTGATTTGATGAACATGT+AGG | - | chr5.3:69469001-69469020 | MS.gene37909:intron | 30.0% | |
| ! | ATTTGAAGCAGATCAACAAT+TGG | - | chr5.3:69469063-69469082 | MS.gene37909:intron | 30.0% |
| ! | CATCAATTGACAAAGTCTTT+TGG | - | chr5.3:69467153-69467172 | MS.gene37909:intron | 30.0% |
| ! | GTCAATGATTTATGCTTTTG+AGG | - | chr5.3:69468596-69468615 | MS.gene37909:intron | 30.0% |
| ! | TGTAGTAGTTTAGTTTCTAG+TGG | - | chr5.3:69466940-69466959 | MS.gene37909:intron | 30.0% |
| !! | GCCTTAGTTGATTTTCATAT+GGG | - | chr5.3:69466991-69467010 | MS.gene37909:intron | 30.0% |
| !! | TCTCTTTTCTAGGTTTTTAG+GGG | + | chr5.3:69466036-69466055 | None:intergenic | 30.0% |
| !! | TGCCTTAGTTGATTTTCATA+TGG | - | chr5.3:69466990-69467009 | MS.gene37909:intron | 30.0% |
| !!! | GAATGGTCTATGTGTTTTTT+TGG | - | chr5.3:69466062-69466081 | MS.gene37909:intron | 30.0% |
| !!! | TACATGACCCCTTTTTTTAT+AGG | - | chr5.3:69467655-69467674 | MS.gene37909:intron | 30.0% |
| !!! | TGGTGTTGTGTTATTTTGAA+AGG | - | chr5.3:69467945-69467964 | MS.gene37909:intron | 30.0% |
| AACAACCTAGATACTACTCA+AGG | - | chr5.3:69468014-69468033 | MS.gene37909:intron | 35.0% | |
| AATTCCCAATGCAATCTTGA+TGG | - | chr5.3:69466585-69466604 | MS.gene37909:intron | 35.0% | |
| ACACAACACCACAAATCAAA+CGG | + | chr5.3:69467936-69467955 | None:intergenic | 35.0% | |
| ACATTGAAGGAGATTTAAGG+AGG | + | chr5.3:69467749-69467768 | None:intergenic | 35.0% | |
| AGATGTAGAATAGTTACCGA+TGG | + | chr5.3:69468200-69468219 | None:intergenic | 35.0% | |
| ATCTTCATGACCATTATCCT+TGG | - | chr5.3:69465927-69465946 | MS.gene37909:intron | 35.0% | |
| ATGACCAAGAATTAGTGAGA+TGG | - | chr5.3:69466170-69466189 | MS.gene37909:intron | 35.0% | |
| ATTTCTTAATCAATGCCCAG+GGG | - | chr5.3:69468660-69468679 | MS.gene37909:CDS | 35.0% | |
| CAGTTCATGTAATCATTGTC+CGG | + | chr5.3:69467801-69467820 | None:intergenic | 35.0% | |
| GAAAGAAGAACTAACACACA+AGG | + | chr5.3:69466712-69466731 | None:intergenic | 35.0% | |
| GAAATATTGAATGGCTCTTC+AGG | - | chr5.3:69465700-69465719 | MS.gene37909:intron | 35.0% | |
| GAAATCCATCAAGATTGCAT+TGG | + | chr5.3:69466593-69466612 | None:intergenic | 35.0% | |
| GATGTAGAATAGTTACCGAT+GGG | + | chr5.3:69468199-69468218 | None:intergenic | 35.0% | |
| GATTTCTTAATCAATGCCCA+GGG | - | chr5.3:69468659-69468678 | MS.gene37909:CDS | 35.0% | |
| GGAAGTAGTAGTTCTTGTAT+AGG | - | chr5.3:69465730-69465749 | MS.gene37909:intron | 35.0% | |
| GGTGATAATTGAACTACTAG+AGG | + | chr5.3:69466013-69466032 | None:intergenic | 35.0% | |
| GGTGTTTGAACTAGGTTAAA+AGG | - | chr5.3:69466282-69466301 | MS.gene37909:intron | 35.0% | |
| GTCATATTATACTTACCTCG+CGG | + | chr5.3:69466155-69466174 | None:intergenic | 35.0% | |
| TAATTGAACTACTAGAGGTG+TGG | + | chr5.3:69466008-69466027 | None:intergenic | 35.0% | |
| TCATATATCAATCATGCCGT+TGG | - | chr5.3:69468229-69468248 | MS.gene37909:intron | 35.0% | |
| TGACAACTACGATTGATTGT+TGG | + | chr5.3:69466439-69466458 | None:intergenic | 35.0% | |
| TGATTTCTTAATCAATGCCC+AGG | - | chr5.3:69468658-69468677 | MS.gene37909:CDS | 35.0% | |
| TGTGCTATGAAACATTCCAA+CGG | + | chr5.3:69468248-69468267 | None:intergenic | 35.0% | |
| TGTTAACCCTCTAGTTACTA+GGG | - | chr5.3:69466102-69466121 | MS.gene37909:intron | 35.0% | |
| TGTTGATCTGCTTCAAATCT+AGG | + | chr5.3:69469061-69469080 | None:intergenic | 35.0% | |
| TTAACCTAGTTCAAACACCT+TGG | + | chr5.3:69466281-69466300 | None:intergenic | 35.0% | |
| ! | AAAAGCATGGCTTCTTTGAA+GGG | + | chr5.3:69465832-69465851 | None:intergenic | 35.0% |
| ! | AATTGACAAAGTCTTTTGGC+AGG | - | chr5.3:69467157-69467176 | MS.gene37909:intron | 35.0% |
| !! | AGTAGTTTAGTTTCTAGTGG+TGG | - | chr5.3:69466943-69466962 | MS.gene37909:intron | 35.0% |
| !! | ATGCAATCTTGATGGATTTC+CGG | - | chr5.3:69466593-69466612 | MS.gene37909:intron | 35.0% |
| !! | CTCTTTTCTAGGTTTTTAGG+GGG | + | chr5.3:69466035-69466054 | None:intergenic | 35.0% |
| !! | GTGTTTTTAACATGGATCCA+AGG | - | chr5.3:69466261-69466280 | MS.gene37909:intron | 35.0% |
| !! | TAGTTCTTCCGTTTGATTTG+TGG | - | chr5.3:69467925-69467944 | MS.gene37909:intron | 35.0% |
| !! | TCTTTTCTAGGTTTTTAGGG+GGG | + | chr5.3:69466034-69466053 | None:intergenic | 35.0% |
| !!! | AGTGTGATTTTTTTGCAGGT+TGG | - | chr5.3:69465628-69465647 | MS.gene37909:intron | 35.0% |
| !!! | CAAGTTTTCGCTTGTTTTGA+TGG | - | chr5.3:69465601-69465620 | MS.gene37909:intron | 35.0% |
| AAGCATTCCTCACACTAATG+TGG | - | chr5.3:69467494-69467513 | MS.gene37909:intron | 40.0% | |
| AGAATAGTTACCGATGGGTA+AGG | + | chr5.3:69468194-69468213 | None:intergenic | 40.0% | |
| AGCATTCCTCACACTAATGT+GGG | - | chr5.3:69467495-69467514 | MS.gene37909:intron | 40.0% | |
| AGTAAATTGTTAGAGGGGAG+AGG | - | chr5.3:69467691-69467710 | MS.gene37909:intron | 40.0% | |
| CTCTTACCTCAATTGCTTGA+AGG | - | chr5.3:69465319-69465338 | MS.gene37909:CDS | 40.0% | |
| CTTCAAGCAATTGAGGTAAG+AGG | + | chr5.3:69465321-69465340 | None:intergenic | 40.0% | |
| CTTCACCTTGAGTAGTATCT+AGG | + | chr5.3:69468022-69468041 | None:intergenic | 40.0% | |
| GCAAATTGCATATCCTCAGA+AGG | + | chr5.3:69469119-69469138 | None:intergenic | 40.0% | |
| GGATGCCACAAATTACTACA+TGG | - | chr5.3:69469145-69469164 | MS.gene37909:intron | 40.0% | |
| GGGACATTGAAGGAGATTTA+AGG | + | chr5.3:69467752-69467771 | None:intergenic | 40.0% | |
| GGGACTTTCAACTTCTTTAG+TGG | + | chr5.3:69467112-69467131 | None:intergenic | 40.0% | |
| GTAAATTGTTAGAGGGGAGA+GGG | - | chr5.3:69467692-69467711 | MS.gene37909:intron | 40.0% | |
| GTGTTAACCCTCTAGTTACT+AGG | - | chr5.3:69466101-69466120 | MS.gene37909:intron | 40.0% | |
| TAACCAAGGTCACACATGAA+AGG | + | chr5.3:69466644-69466663 | None:intergenic | 40.0% | |
| TACTACTCAAGGTGAAGATC+AGG | - | chr5.3:69468025-69468044 | MS.gene37909:intron | 40.0% | |
| TAGTTTCCGAGGATCAAACT+CGG | - | chr5.3:69467721-69467740 | MS.gene37909:intron | 40.0% | |
| TATAGGTGAAGATCCAGGTT+TGG | - | chr5.3:69465747-69465766 | MS.gene37909:intron | 40.0% | |
| TATTGAATGGCTCTTCAGGA+AGG | - | chr5.3:69465704-69465723 | MS.gene37909:intron | 40.0% | |
| TCTTGTATAGGTGAAGATCC+AGG | - | chr5.3:69465742-69465761 | MS.gene37909:intron | 40.0% | |
| TTAATCAGAGAAAACGCCAC+TGG | - | chr5.3:69469090-69469109 | MS.gene37909:intron | 40.0% | |
| TTTCCTTTCATGTGTGACCT+TGG | - | chr5.3:69466638-69466657 | MS.gene37909:intron | 40.0% | |
| ! | ATTCTGCAAGTGCTTGCTTT+TGG | + | chr5.3:69469031-69469050 | None:intergenic | 40.0% |
| ! | GAAAAGCATGGCTTCTTTGA+AGG | + | chr5.3:69465833-69465852 | None:intergenic | 40.0% |
| ! | TGTGTGAGAGTTTGAAGTTC+AGG | + | chr5.3:69465346-69465365 | None:intergenic | 40.0% |
| ! | TTACAAATGGCCTTACCCAT+CGG | - | chr5.3:69468181-69468200 | MS.gene37909:intron | 40.0% |
| !! | AGTTTAGTTTCTAGTGGTGG+AGG | - | chr5.3:69466946-69466965 | MS.gene37909:intron | 40.0% |
| !! | CGCAAGTATAGTGGATATCT+AGG | - | chr5.3:69468068-69468087 | MS.gene37909:intron | 40.0% |
| !! | GGATATGCAATTTGCTGTGA+TGG | - | chr5.3:69469124-69469143 | MS.gene37909:intron | 40.0% |
| !! | GTTGCTGTTTCAACTGACTT+TGG | - | chr5.3:69465883-69465902 | MS.gene37909:intron | 40.0% |
| !! | TGGATTTCCGGATGTTTTGA+AGG | - | chr5.3:69466605-69466624 | MS.gene37909:intron | 40.0% |
| !! | TTCTGCAAGTGCTTGCTTTT+GGG | + | chr5.3:69469030-69469049 | None:intergenic | 40.0% |
| AAGAATTGAGTCCCAGCTCA+AGG | - | chr5.3:69465858-69465877 | MS.gene37909:intron | 45.0% | |
| AGCATAGGCATAGCATCCAT+AGG | + | chr5.3:69469194-69469213 | None:intergenic | 45.0% | |
| AGGGCCATCTCACTAATTCT+TGG | + | chr5.3:69466177-69466196 | None:intergenic | 45.0% | |
| AGGTTTGGATCAGTTCATGG+AGG | - | chr5.3:69465762-69465781 | MS.gene37909:intron | 45.0% | |
| ATGTAATCATTGTCCGGCGT+AGG | + | chr5.3:69467795-69467814 | None:intergenic | 45.0% | |
| CAGCTTCTACGCAAGTATAG+TGG | - | chr5.3:69468059-69468078 | MS.gene37909:intron | 45.0% | |
| CGACATAGGATGACAAGACA+TGG | + | chr5.3:69466829-69466848 | None:intergenic | 45.0% | |
| GATGTGCAAGCCATTTCCTA+TGG | - | chr5.3:69469175-69469194 | MS.gene37909:CDS | 45.0% | |
| GCTGGGACTCAATTCTTGAA+AGG | + | chr5.3:69465855-69465874 | None:intergenic | 45.0% | |
| GGCATAGCATCCATAGGAAA+TGG | + | chr5.3:69469188-69469207 | None:intergenic | 45.0% | |
| TAATGTTAACCGATGCCCCT+GGG | + | chr5.3:69468678-69468697 | None:intergenic | 45.0% | |
| TCAGGACCTTCAAGCAATTG+AGG | + | chr5.3:69465328-69465347 | None:intergenic | 45.0% | |
| TCCAGGTTTGGATCAGTTCA+TGG | - | chr5.3:69465759-69465778 | MS.gene37909:intron | 45.0% | |
| TCCATGAACTGATCCAAACC+TGG | + | chr5.3:69465763-69465782 | None:intergenic | 45.0% | |
| TTCACAACTTGGGGGATGAT+TGG | - | chr5.3:69467321-69467340 | MS.gene37909:intron | 45.0% | |
| TTGTGTCCCACATTAGTGTG+AGG | + | chr5.3:69467504-69467523 | None:intergenic | 45.0% | |
| ! | GAGGGAAATGTTAGTTTCCG+AGG | - | chr5.3:69467710-69467729 | MS.gene37909:intron | 45.0% |
| ! | GGATCCAAGGTGTTTGAACT+AGG | - | chr5.3:69466274-69466293 | MS.gene37909:intron | 45.0% |
| !!! | TAGTTTTTTTTTTTTTTTTA+AGG | + | chr5.3:69467063-69467082 | None:intergenic | 5.0% |
| AAACAGCAACAGCCTTGAGC+TGG | + | chr5.3:69465873-69465892 | None:intergenic | 50.0% | |
| AACAGCAACAGCCTTGAGCT+GGG | + | chr5.3:69465872-69465891 | None:intergenic | 50.0% | |
| AACCCTCTAGTTACTAGGGC+AGG | - | chr5.3:69466106-69466125 | MS.gene37909:intron | 50.0% | |
| AACTGCTTGATTGGTGGAGC+AGG | - | chr5.3:69468156-69468175 | MS.gene37909:intron | 50.0% | |
| AATGGCTCTTCAGGAAGGAC+AGG | - | chr5.3:69465709-69465728 | MS.gene37909:intron | 50.0% | |
| AATGTGGGACACGAGTGGAT+TGG | - | chr5.3:69467345-69467364 | MS.gene37909:intron | 50.0% | |
| ACCCTCTAGTTACTAGGGCA+GGG | - | chr5.3:69466107-69466126 | MS.gene37909:intron | 50.0% | |
| AGGTAAGAGGACAAGAGACG+AGG | + | chr5.3:69465308-69465327 | None:intergenic | 50.0% | |
| AGTTGCTGTCGAGCTTCCTT+TGG | + | chr5.3:69468140-69468159 | None:intergenic | 50.0% | |
| CAAGCACTTGCAGAATCCAC+AGG | - | chr5.3:69469035-69469054 | MS.gene37909:intron | 50.0% | |
| CTCGACAGCAACTGCTTGAT+TGG | - | chr5.3:69468147-69468166 | MS.gene37909:intron | 50.0% | |
| CTGCTTCAAATCTAGGCCTG+TGG | + | chr5.3:69469054-69469073 | None:intergenic | 50.0% | |
| GACAAGAGACGAGGAAAGAG+AGG | + | chr5.3:69465299-69465318 | None:intergenic | 50.0% | |
| GACAGCAACTGCTTGATTGG+TGG | - | chr5.3:69468150-69468169 | MS.gene37909:intron | 50.0% | |
| GAGGTTCCGAGTTTGATCCT+CGG | + | chr5.3:69467730-69467749 | None:intergenic | 50.0% | |
| GGTGAGCTAAGGGACATTGA+AGG | + | chr5.3:69467762-69467781 | None:intergenic | 50.0% | |
| GGTGGAGCAGGCATTACAAA+TGG | - | chr5.3:69468168-69468187 | MS.gene37909:intron | 50.0% | |
| GTAATGTTAACCGATGCCCC+TGG | + | chr5.3:69468679-69468698 | None:intergenic | 50.0% | |
| TATCCTCAGAAGGCTTCCAG+TGG | + | chr5.3:69469109-69469128 | None:intergenic | 50.0% | |
| TCTAAGCTAGCCACCACTTC+AGG | + | chr5.3:69465661-69465680 | None:intergenic | 50.0% | |
| TGGGGGATGATTGGCAATGT+GGG | - | chr5.3:69467330-69467349 | MS.gene37909:intron | 50.0% | |
| TTGGGGGATGATTGGCAATG+TGG | - | chr5.3:69467329-69467348 | MS.gene37909:intron | 50.0% | |
| ! | TAATCAATGCCCAGGGGCAT+CGG | - | chr5.3:69468666-69468685 | MS.gene37909:CDS | 50.0% |
| !! | TAGCTCGGTTGGTGAGCTAA+GGG | + | chr5.3:69467772-69467791 | None:intergenic | 50.0% |
| !! | TAGTTTCTAGTGGTGGAGGC+AGG | - | chr5.3:69466950-69466969 | MS.gene37909:intron | 50.0% |
| !! | TGAAGTGGTGGCTAGCTTAG+AGG | - | chr5.3:69465660-69465679 | MS.gene37909:intron | 50.0% |
| AAGCTAGCCACCACTTCAGG+AGG | + | chr5.3:69465658-69465677 | None:intergenic | 55.0% | |
| ATTGTCCGGCGTAGGTAGCT+CGG | + | chr5.3:69467787-69467806 | None:intergenic | 55.0% | |
| CCCCTGCCCTAGTAACTAGA+GGG | + | chr5.3:69466111-69466130 | None:intergenic | 55.0% | |
| CCCTCTAGTTACTAGGGCAG+GGG | - | chr5.3:69466108-69466127 | MS.gene37909:intron | 55.0% | |
| CCTCTAGTTACTAGGGCAGG+GGG | - | chr5.3:69466109-69466128 | MS.gene37909:intron | 55.0% | |
| CGGCCAACTCTGGATTACCA+GGG | + | chr5.3:69466135-69466154 | None:intergenic | 55.0% | |
| TTGGCAATGTGGGACACGAG+TGG | - | chr5.3:69467340-69467359 | MS.gene37909:intron | 55.0% | |
| !! | GTAGCTCGGTTGGTGAGCTA+AGG | + | chr5.3:69467773-69467792 | None:intergenic | 55.0% |
| ACCAACCGAGCTACCTACGC+CGG | - | chr5.3:69467779-69467798 | MS.gene37909:intron | 60.0% | |
| ACGCCACTGGAAGCCTTCTG+AGG | - | chr5.3:69469103-69469122 | MS.gene37909:intron | 60.0% | |
| ACTTACCTCGCGGCCAACTC+TGG | + | chr5.3:69466145-69466164 | None:intergenic | 60.0% | |
| CCCCCTGCCCTAGTAACTAG+AGG | + | chr5.3:69466112-69466131 | None:intergenic | 60.0% | |
| GCGGCCAACTCTGGATTACC+AGG | + | chr5.3:69466136-69466155 | None:intergenic | 60.0% | |
| GGGCCCTGGTAATCCAGAGT+TGG | - | chr5.3:69466129-69466148 | MS.gene37909:intron | 60.0% | |
| GTAATCCAGAGTTGGCCGCG+AGG | - | chr5.3:69466137-69466156 | MS.gene37909:intron | 60.0% | |
| ! | GGTTGGAGCACCTCCTGAAG+TGG | - | chr5.3:69465645-69465664 | MS.gene37909:intron | 60.0% |
| ! | TGGAGCACCTCCTGAAGTGG+TGG | - | chr5.3:69465648-69465667 | MS.gene37909:intron | 60.0% |
| TCCGGCGTAGGTAGCTCGGT+TGG | + | chr5.3:69467783-69467802 | None:intergenic | 65.0% | |
| GTTACTAGGGCAGGGGGCCC+TGG | - | chr5.3:69466115-69466134 | MS.gene37909:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 69465287 | 69469220 | 69465287 | ID=MS.gene37909 |
| chr5.3 | mRNA | 69465287 | 69469220 | 69465287 | ID=MS.gene37909.t1;Parent=MS.gene37909 |
| chr5.3 | exon | 69469167 | 69469220 | 69469167 | ID=MS.gene37909.t1.exon1;Parent=MS.gene37909.t1 |
| chr5.3 | CDS | 69469167 | 69469220 | 69469167 | ID=cds.MS.gene37909.t1;Parent=MS.gene37909.t1 |
| chr5.3 | exon | 69468603 | 69468861 | 69468603 | ID=MS.gene37909.t1.exon2;Parent=MS.gene37909.t1 |
| chr5.3 | CDS | 69468603 | 69468861 | 69468603 | ID=cds.MS.gene37909.t1;Parent=MS.gene37909.t1 |
| chr5.3 | exon | 69466305 | 69466540 | 69466305 | ID=MS.gene37909.t1.exon3;Parent=MS.gene37909.t1 |
| chr5.3 | CDS | 69466305 | 69466540 | 69466305 | ID=cds.MS.gene37909.t1;Parent=MS.gene37909.t1 |
| chr5.3 | exon | 69465287 | 69465484 | 69465287 | ID=MS.gene37909.t1.exon4;Parent=MS.gene37909.t1 |
| chr5.3 | CDS | 69465287 | 69465484 | 69465287 | ID=cds.MS.gene37909.t1;Parent=MS.gene37909.t1 |
| Gene Sequence |
| Protein sequence |
