Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38635.t1 | RHN51799.1 | 95.2 | 314 | 15 | 0 | 8 | 321 | 1 | 314 | 1.50E-179 | 638.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38635.t1 | Q8LG03 | 41.2 | 301 | 158 | 5 | 8 | 290 | 1 | 300 | 4.3e-58 | 226.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38635.t1 | A0A396HEQ9 | 95.2 | 314 | 15 | 0 | 8 | 321 | 1 | 314 | 1.1e-179 | 638.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049343 | MS.gene38635 | 0.81717 | 3.79E-52 | -1.69E-46 |
| MS.gene050953 | MS.gene38635 | 0.809716 | 1.65E-50 | -1.69E-46 |
| MS.gene052108 | MS.gene38635 | 0.838623 | 2.58E-57 | -1.69E-46 |
| MS.gene052926 | MS.gene38635 | 0.802703 | 4.95E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene38635 | 0.809963 | 1.46E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene38635 | 0.801903 | 7.23E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene38635 | 0.80441 | 2.19E-49 | -1.69E-46 |
| MS.gene054405 | MS.gene38635 | 0.801648 | 8.16E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene38635 | 0.802787 | 4.75E-49 | -1.69E-46 |
| MS.gene05659 | MS.gene38635 | 0.824332 | 8.55E-54 | -1.69E-46 |
| MS.gene056776 | MS.gene38635 | 0.80403 | 2.63E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene38635 | 0.800966 | 1.12E-48 | -1.69E-46 |
| MS.gene057208 | MS.gene38635 | 0.830643 | 2.62E-55 | -1.69E-46 |
| MS.gene058498 | MS.gene38635 | 0.835456 | 1.66E-56 | -1.69E-46 |
| MS.gene058500 | MS.gene38635 | 0.807385 | 5.19E-50 | -1.69E-46 |
| MS.gene058502 | MS.gene38635 | 0.803598 | 3.23E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene38635 | 0.817245 | 3.65E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene38635 | 0.835938 | 1.25E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38635.t1 | MTR_7g076190 | 42.244 | 303 | 157 | 6 | 1 | 286 | 1 | 302 | 2.29e-76 | 239 |
| MS.gene38635.t1 | MTR_6g042460 | 40.968 | 310 | 124 | 9 | 1 | 298 | 1 | 263 | 2.15e-52 | 174 |
| MS.gene38635.t1 | MTR_0032s0060 | 37.281 | 228 | 75 | 7 | 59 | 272 | 1 | 174 | 7.26e-32 | 117 |
| MS.gene38635.t1 | MTR_6g042480 | 36.364 | 143 | 54 | 4 | 41 | 173 | 138 | 253 | 4.56e-17 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38635.t1 | AT4G00755 | 40.777 | 309 | 163 | 6 | 8 | 297 | 1 | 308 | 6.06e-72 | 227 |
| MS.gene38635.t1 | AT4G00755 | 40.777 | 309 | 163 | 6 | 8 | 297 | 1 | 308 | 6.06e-72 | 227 |
Find 84 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGATGCAGTCGTTCCTTAT+AGG | 0.221810 | 6.2:+56376818 | None:intergenic |
| TATCTGTTGTTTCTAAATCT+TGG | 0.279879 | 6.2:-56377243 | MS.gene38635:CDS |
| TGAACAACACCGGATATTTC+AGG | 0.298391 | 6.2:+56376932 | None:intergenic |
| CTCTGAGACAAGGCAAATAT+TGG | 0.305057 | 6.2:+56376637 | None:intergenic |
| TTAAAGGGCTAACCTTGATA+TGG | 0.322180 | 6.2:+56376602 | None:intergenic |
| CTCACAAGCACAGGGGAGTT+TGG | 0.332401 | 6.2:-56373690 | MS.gene38635:CDS |
| TGGTGTCGGTGCCGGTTTAT+CGG | 0.336026 | 6.2:-56373670 | MS.gene38635:CDS |
| ATCTGTTGTTTCTAAATCTT+GGG | 0.336145 | 6.2:-56377242 | MS.gene38635:CDS |
| ATCTCTCATGTTCAAGTTGT+TGG | 0.346511 | 6.2:-56373781 | MS.gene38635:CDS |
| CTGCCTGAGCCTGTTCTGTT+TGG | 0.362334 | 6.2:-56374366 | MS.gene38635:CDS |
| CGTTTGGCCTCAGTCCTATA+AGG | 0.368827 | 6.2:-56376832 | MS.gene38635:CDS |
| CCTGAGCCTGTTCTGTTTGG+TGG | 0.378452 | 6.2:-56374363 | MS.gene38635:CDS |
| TATCGGAGGTGGCGGCAGAT+GGG | 0.380152 | 6.2:-56373653 | MS.gene38635:CDS |
| ACTAAAGCCTCGGGAATAGA+AGG | 0.383932 | 6.2:+56376674 | None:intergenic |
| AGGATAGTTTATTCTACATA+TGG | 0.385716 | 6.2:-56374296 | MS.gene38635:intron |
| CCATCATATTGGTCAAGTAT+AGG | 0.386739 | 6.2:-56376707 | MS.gene38635:CDS |
| ATCTATGCGTGTCTGGCGTT+TGG | 0.396682 | 6.2:-56376848 | MS.gene38635:CDS |
| TTATCGGAGGTGGCGGCAGA+TGG | 0.400441 | 6.2:-56373654 | MS.gene38635:CDS |
| CATCATATTGGTCAAGTATA+GGG | 0.407014 | 6.2:-56376706 | MS.gene38635:CDS |
| TGCCGCCACCTCCGATAAAC+CGG | 0.413853 | 6.2:+56373659 | None:intergenic |
| ACAGCCTTAGCAGAATATAT+TGG | 0.415461 | 6.2:+56376458 | None:intergenic |
| GGGGAGTTTGGTGTCGGTGC+CGG | 0.415657 | 6.2:-56373678 | MS.gene38635:CDS |
| ATGAAGATGGCCCATCATAT+TGG | 0.421170 | 6.2:-56376718 | MS.gene38635:CDS |
| TTCCTCCCAGTCGTCATTAG+TGG | 0.422570 | 6.2:+56376775 | None:intergenic |
| TAAGGCTGTACGGTTTAGAT+TGG | 0.424835 | 6.2:-56376444 | MS.gene38635:CDS |
| AAACAACAGATACATGAATA+AGG | 0.435490 | 6.2:+56377254 | None:intergenic |
| TCATTAAAAGTCAATGAATC+AGG | 0.437442 | 6.2:+56376377 | None:intergenic |
| CCATCTTCATTTCCATCCCC+AGG | 0.447186 | 6.2:+56376731 | None:intergenic |
| TCATAAAATCTATGCGTGTC+TGG | 0.454428 | 6.2:-56376855 | MS.gene38635:CDS |
| ACATGTCATCACCGAGCCAT+TGG | 0.466698 | 6.2:+56377314 | None:intergenic |
| GTCACGAGGATCATCCAAAT+AGG | 0.466815 | 6.2:+56377276 | None:intergenic |
| CCTATACTTGACCAATATGA+TGG | 0.471150 | 6.2:+56376707 | None:intergenic |
| AGGGCTAACCTTGATATGGC+TGG | 0.474666 | 6.2:+56376606 | None:intergenic |
| AAGGCTGTACGGTTTAGATT+GGG | 0.480927 | 6.2:-56376443 | MS.gene38635:CDS |
| ACATCTCCACCAAACAGAAC+AGG | 0.482223 | 6.2:+56374357 | None:intergenic |
| GACAATGTGATTGAACTTGA+TGG | 0.484953 | 6.2:-56376896 | MS.gene38635:CDS |
| GGTATTTCCCTCACAAGCAC+AGG | 0.491771 | 6.2:-56373699 | MS.gene38635:CDS |
| AAAATGTTTCCTGAAATATC+CGG | 0.494065 | 6.2:-56376941 | MS.gene38635:CDS |
| ATCGGAGGTGGCGGCAGATG+GGG | 0.504182 | 6.2:-56373652 | MS.gene38635:CDS |
| GTCTAAAGTGAAAACCAACT+TGG | 0.505439 | 6.2:-56377344 | MS.gene38635:CDS |
| ACATGAGACATGGGAAATAC+AGG | 0.509039 | 6.2:+56376329 | None:intergenic |
| TAGCTTATATACTAAAGCCT+CGG | 0.519559 | 6.2:+56376664 | None:intergenic |
| GTTCTGCTAGTGGAGCTGTT+AGG | 0.522011 | 6.2:-56374336 | MS.gene38635:CDS |
| CCATTGGATTAAATCCAAGT+TGG | 0.523334 | 6.2:+56377330 | None:intergenic |
| AATACATTGGAGCCTGGGGA+TGG | 0.526705 | 6.2:-56376743 | MS.gene38635:CDS |
| TGAGAGACACGACATGGAAG+TGG | 0.528115 | 6.2:-56376417 | MS.gene38635:CDS |
| CGGTGCCGGTTTATCGGAGG+TGG | 0.535991 | 6.2:-56373664 | MS.gene38635:CDS |
| CGGTGTTGTTCATAGCATTG+AGG | 0.536648 | 6.2:-56376921 | MS.gene38635:CDS |
| CTCCCAGTCGTCATTAGTGG+TGG | 0.536664 | 6.2:+56376778 | None:intergenic |
| CATCCACCACTAATGACGAC+TGG | 0.536665 | 6.2:-56376781 | MS.gene38635:CDS |
| AGCTTATATACTAAAGCCTC+GGG | 0.538889 | 6.2:+56376665 | None:intergenic |
| CAAACTCCCCTGTGCTTGTG+AGG | 0.539267 | 6.2:+56373691 | None:intergenic |
| ATTCATATCCAGCCATATCA+AGG | 0.540493 | 6.2:-56376614 | MS.gene38635:intron |
| TATATTCTGCTAAGGCTGTA+CGG | 0.543823 | 6.2:-56376454 | MS.gene38635:CDS |
| TGGTGGAGATGTTCTGCTAG+TGG | 0.547881 | 6.2:-56374346 | MS.gene38635:CDS |
| CACTTCCTCACAATAAATGC+AGG | 0.554014 | 6.2:+56373745 | None:intergenic |
| CCTGGGGATGGAAATGAAGA+TGG | 0.559169 | 6.2:-56376731 | MS.gene38635:CDS |
| TGCCGGTTTATCGGAGGTGG+CGG | 0.559301 | 6.2:-56373661 | MS.gene38635:CDS |
| CCACCAAACAGAACAGGCTC+AGG | 0.560451 | 6.2:+56374363 | None:intergenic |
| TTGTCCAATATATTCTGCTA+AGG | 0.589906 | 6.2:-56376462 | MS.gene38635:CDS |
| CCAACTTGGATTTAATCCAA+TGG | 0.591039 | 6.2:-56377330 | MS.gene38635:CDS |
| TTGGATTTAATCCAATGGCT+CGG | 0.593799 | 6.2:-56377325 | MS.gene38635:CDS |
| TGAGGAAGTGTGAACGTGGA+AGG | 0.596029 | 6.2:-56373732 | MS.gene38635:CDS |
| TTTCTCCTGCATTTATTGTG+AGG | 0.598565 | 6.2:-56373750 | MS.gene38635:CDS |
| AAACTCCCCTGTGCTTGTGA+GGG | 0.599121 | 6.2:+56373692 | None:intergenic |
| CTATACTTGACCAATATGAT+GGG | 0.600040 | 6.2:+56376708 | None:intergenic |
| CTCAATGCTATGAACAACAC+CGG | 0.603064 | 6.2:+56376922 | None:intergenic |
| TCAAGCAAAGTCGTTTGCAG+AGG | 0.606462 | 6.2:+56376963 | None:intergenic |
| AAGCGATCCTTCTATTCCCG+AGG | 0.609072 | 6.2:-56376681 | MS.gene38635:CDS |
| AGCACAGGGGAGTTTGGTGT+CGG | 0.622249 | 6.2:-56373684 | MS.gene38635:CDS |
| ATCCACCACTAATGACGACT+GGG | 0.624259 | 6.2:-56376780 | MS.gene38635:CDS |
| GTATTTCCCTCACAAGCACA+GGG | 0.626241 | 6.2:-56373698 | MS.gene38635:CDS |
| ATGCAACTCACATGAGACAT+GGG | 0.629192 | 6.2:+56376320 | None:intergenic |
| AATGCAACTCACATGAGACA+TGG | 0.629409 | 6.2:+56376319 | None:intergenic |
| TGTCGGTGCCGGTTTATCGG+AGG | 0.633221 | 6.2:-56373667 | MS.gene38635:CDS |
| CGGTGATGACATGTCAACAA+AGG | 0.638103 | 6.2:-56377305 | MS.gene38635:CDS |
| GGGCTGTGAGAGACACGACA+TGG | 0.651620 | 6.2:-56376423 | MS.gene38635:CDS |
| ATTGTGAGGAAGTGTGAACG+TGG | 0.659589 | 6.2:-56373736 | MS.gene38635:CDS |
| GGATATGAATCTCTGAGACA+AGG | 0.662272 | 6.2:+56376627 | None:intergenic |
| CACCACTAATGACGACTGGG+AGG | 0.695898 | 6.2:-56376777 | MS.gene38635:CDS |
| AGTCGTTCCTTATAGGACTG+AGG | 0.710535 | 6.2:+56376825 | None:intergenic |
| GATACATGAATAAGGTCACG+AGG | 0.731708 | 6.2:+56377262 | None:intergenic |
| AACGTGGAAGGTGTAGCTTG+AGG | 0.772454 | 6.2:-56373720 | MS.gene38635:CDS |
| TATTTCCCTCACAAGCACAG+GGG | 0.781184 | 6.2:-56373697 | MS.gene38635:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATGTATGAAATTTATA+CGG | + | chr6.2:56375637-56375656 | None:intergenic | 10.0% |
| !! | AATTCATCACTATATTTAAA+GGG | + | chr6.2:56374404-56374423 | None:intergenic | 15.0% |
| !! | ATAACACAAATATGTATTTA+GGG | + | chr6.2:56377072-56377091 | None:intergenic | 15.0% |
| !! | ATTCAAATTACATGTATAAA+TGG | + | chr6.2:56374792-56374811 | None:intergenic | 15.0% |
| !! | ATTTCTATATATTGTTCTTT+AGG | + | chr6.2:56375413-56375432 | None:intergenic | 15.0% |
| !! | TACATATAAAATTTATTTCG+TGG | - | chr6.2:56375648-56375667 | MS.gene38635:intron | 15.0% |
| !! | TATAACACAAATATGTATTT+AGG | + | chr6.2:56377073-56377092 | None:intergenic | 15.0% |
| !! | TATTATTAATCATATAGAAC+AGG | + | chr6.2:56375758-56375777 | None:intergenic | 15.0% |
| !! | TGTTCTATATGATTAATAAT+AGG | - | chr6.2:56375757-56375776 | MS.gene38635:intron | 15.0% |
| !!! | ATACATGTAATTTGAATTTT+GGG | - | chr6.2:56374795-56374814 | MS.gene38635:intron | 15.0% |
| !!! | CATTTTAAAATATTTTGCTT+CGG | - | chr6.2:56376983-56377002 | MS.gene38635:intron | 15.0% |
| !!! | TATAAGTTTTCAAATTGTAA+TGG | - | chr6.2:56373883-56373902 | MS.gene38635:intron | 15.0% |
| !!! | TATACATGTAATTTGAATTT+TGG | - | chr6.2:56374794-56374813 | MS.gene38635:intron | 15.0% |
| !! | ATCAATAAAAGATGAACAAA+GGG | - | chr6.2:56375438-56375457 | MS.gene38635:intron | 20.0% |
| !! | ATGTGTATCTTTACTTTATT+TGG | - | chr6.2:56373821-56373840 | MS.gene38635:intron | 20.0% |
| !! | ATTTCTCATTAACATTGAAA+AGG | + | chr6.2:56375833-56375852 | None:intergenic | 20.0% |
| !! | CAATTCATCACTATATTTAA+AGG | + | chr6.2:56374405-56374424 | None:intergenic | 20.0% |
| !! | CTAAAAAATTCAGTTCAAAA+TGG | + | chr6.2:56376521-56376540 | None:intergenic | 20.0% |
| !! | CTAGATAATGATATTTAGAA+CGG | + | chr6.2:56374839-56374858 | None:intergenic | 20.0% |
| !! | TAAAATGTACTGCAATAATA+TGG | + | chr6.2:56376970-56376989 | None:intergenic | 20.0% |
| !! | TAACACAAATATGTATTTAG+GGG | + | chr6.2:56377071-56377090 | None:intergenic | 20.0% |
| !! | TATCAATAAAAGATGAACAA+AGG | - | chr6.2:56375437-56375456 | MS.gene38635:intron | 20.0% |
| !! | TTTCTCATTAACATTGAAAA+GGG | + | chr6.2:56375832-56375851 | None:intergenic | 20.0% |
| !!! | CTTTACTTTATTTGGTTAAA+TGG | - | chr6.2:56373829-56373848 | MS.gene38635:intron | 20.0% |
| !!! | GGAAAACTTTAAAAATACAT+TGG | - | chr6.2:56374232-56374251 | MS.gene38635:intron | 20.0% |
| ! | AAAATGTTTCCTGAAATATC+CGG | - | chr6.2:56374047-56374066 | MS.gene38635:intron | 25.0% |
| ! | AAACAACAGATACATGAATA+AGG | + | chr6.2:56373737-56373756 | None:intergenic | 25.0% |
| ! | AGGATAGTTTATTCTACATA+TGG | - | chr6.2:56376692-56376711 | MS.gene38635:CDS | 25.0% |
| ! | AGGTAGAATAAAAGAAAAAG+AGG | - | chr6.2:56376672-56376691 | MS.gene38635:CDS | 25.0% |
| ! | AGTTTATTATTTGCAGTTCT+AGG | - | chr6.2:56373790-56373809 | MS.gene38635:intron | 25.0% |
| ! | ATAGGATAACATTCCTATTT+AGG | - | chr6.2:56375775-56375794 | MS.gene38635:intron | 25.0% |
| ! | ATCCAAGATTTATATTCAAC+TGG | + | chr6.2:56376487-56376506 | None:intergenic | 25.0% |
| ! | ATGTTAAATAAAACACACAC+AGG | - | chr6.2:56376075-56376094 | MS.gene38635:intron | 25.0% |
| ! | CCAATTAAAATTGGCAATAA+TGG | + | chr6.2:56376807-56376826 | None:intergenic | 25.0% |
| ! | CTACTAGTTAGTTATAAGTT+TGG | - | chr6.2:56376049-56376068 | MS.gene38635:intron | 25.0% |
| ! | CTTCTAAGTCCAATTAAAAT+TGG | + | chr6.2:56376816-56376835 | None:intergenic | 25.0% |
| ! | TAATCAAACACACTAGTATA+AGG | + | chr6.2:56375953-56375972 | None:intergenic | 25.0% |
| ! | TACCAGTTGAATATAAATCT+TGG | - | chr6.2:56376482-56376501 | MS.gene38635:intron | 25.0% |
| ! | TCATTAAAAGTCAATGAATC+AGG | + | chr6.2:56374614-56374633 | None:intergenic | 25.0% |
| ! | TCTAAATCTTGGGAAAAAAT+TGG | - | chr6.2:56373756-56373775 | MS.gene38635:CDS | 25.0% |
| ! | TCTCATAAATTGGATTACTA+TGG | - | chr6.2:56377178-56377197 | MS.gene38635:intron | 25.0% |
| ! | TGTGGAACTAATAAACATTA+AGG | + | chr6.2:56375051-56375070 | None:intergenic | 25.0% |
| ! | TTCTCATTAACATTGAAAAG+GGG | + | chr6.2:56375831-56375850 | None:intergenic | 25.0% |
| !! | AAGGATGTATAAAAGTGTAA+TGG | + | chr6.2:56375934-56375953 | None:intergenic | 25.0% |
| !! | CTTTTAATGAGGATTTCAAA+TGG | - | chr6.2:56374624-56374643 | MS.gene38635:intron | 25.0% |
| !! | GCCTGTTTATGAAATTTTAA+AGG | - | chr6.2:56376556-56376575 | MS.gene38635:intron | 25.0% |
| !! | TAATGATATTTAGAACGGAT+AGG | + | chr6.2:56374834-56374853 | None:intergenic | 25.0% |
| !!! | ATCTGTTGTTTCTAAATCTT+GGG | - | chr6.2:56373746-56373765 | MS.gene38635:CDS | 25.0% |
| !!! | CCATTATTGCCAATTTTAAT+TGG | - | chr6.2:56376804-56376823 | MS.gene38635:CDS | 25.0% |
| !!! | GCCTTTAAAATTTCATAAAC+AGG | + | chr6.2:56376560-56376579 | None:intergenic | 25.0% |
| !!! | TAGTCTTGTACATTATTTAG+TGG | + | chr6.2:56377019-56377038 | None:intergenic | 25.0% |
| !!! | TATCTGTTGTTTCTAAATCT+TGG | - | chr6.2:56373745-56373764 | MS.gene38635:CDS | 25.0% |
| !!! | TGATTCATTGACTTTTAATG+AGG | - | chr6.2:56374613-56374632 | MS.gene38635:intron | 25.0% |
| !!! | TTCTTTTGGATAATGGTAAT+TGG | - | chr6.2:56374895-56374914 | MS.gene38635:intron | 25.0% |
| ACAAGGATAGATTGTTAAGA+TGG | - | chr6.2:56375466-56375485 | MS.gene38635:intron | 30.0% | |
| ACATGAGATGTAACCTAAAT+AGG | + | chr6.2:56375791-56375810 | None:intergenic | 30.0% | |
| CATCATATTGGTCAAGTATA+GGG | - | chr6.2:56374282-56374301 | MS.gene38635:intron | 30.0% | |
| CTATACTTGACCAATATGAT+GGG | + | chr6.2:56374283-56374302 | None:intergenic | 30.0% | |
| GAGTTGCATTATGATCATAT+AGG | - | chr6.2:56374682-56374701 | MS.gene38635:intron | 30.0% | |
| GGTTAAATGGTTGTTCATTT+GGG | - | chr6.2:56373842-56373861 | MS.gene38635:intron | 30.0% | |
| GTAATCCAATTTATGAGAGT+TGG | + | chr6.2:56377176-56377195 | None:intergenic | 30.0% | |
| TACATGTTAAGTCTCATTCT+AGG | + | chr6.2:56374874-56374893 | None:intergenic | 30.0% | |
| TAGCTTATATACTAAAGCCT+CGG | + | chr6.2:56374327-56374346 | None:intergenic | 30.0% | |
| TCTGCAAAAAATATCCTTGA+TGG | - | chr6.2:56374948-56374967 | MS.gene38635:intron | 30.0% | |
| TGGTTAAATGGTTGTTCATT+TGG | - | chr6.2:56373841-56373860 | MS.gene38635:intron | 30.0% | |
| TTAAAAATACATTGGAGCCT+GGG | - | chr6.2:56374240-56374259 | MS.gene38635:intron | 30.0% | |
| TTCGGTGGAATAAAATTTAC+AGG | + | chr6.2:56373909-56373928 | None:intergenic | 30.0% | |
| TTGTCCAATATATTCTGCTA+AGG | - | chr6.2:56374526-56374545 | MS.gene38635:intron | 30.0% | |
| TTTAAAAATACATTGGAGCC+TGG | - | chr6.2:56374239-56374258 | MS.gene38635:intron | 30.0% | |
| ! | AACAAAGGTTTTCTCCTATT+TGG | - | chr6.2:56373698-56373717 | MS.gene38635:CDS | 30.0% |
| ! | ATTTTATTCCACCGAATGTA+AGG | - | chr6.2:56373913-56373932 | MS.gene38635:intron | 30.0% |
| ! | CATGTAGTTCTTTTGGATAA+TGG | - | chr6.2:56374888-56374907 | MS.gene38635:intron | 30.0% |
| ! | CTACTGAACCGATAAATTTT+CGG | + | chr6.2:56376257-56376276 | None:intergenic | 30.0% |
| ! | GACTTAACATGTAGTTCTTT+TGG | - | chr6.2:56374881-56374900 | MS.gene38635:intron | 30.0% |
| ! | TTTTATTCCACCGAATGTAA+GGG | - | chr6.2:56373914-56373933 | MS.gene38635:intron | 30.0% |
| !! | ATAAAAATATCTTGGTGCTG+AGG | + | chr6.2:56376158-56376177 | None:intergenic | 30.0% |
| !! | TTAGTTCAAGCAATTTTAGC+TGG | - | chr6.2:56376226-56376245 | MS.gene38635:intron | 30.0% |
| !!! | CAAGATCCGGATTTTTTTTA+AGG | - | chr6.2:56376443-56376462 | MS.gene38635:CDS | 30.0% |
| !!! | TATTTTTTGCAGATACCTAG+AGG | + | chr6.2:56374941-56374960 | None:intergenic | 30.0% |
| ACACCGAATTAATGGAGTTT+GGG | - | chr6.2:56376756-56376775 | MS.gene38635:CDS | 35.0% | |
| ACAGCCTTAGCAGAATATAT+TGG | + | chr6.2:56374533-56374552 | None:intergenic | 35.0% | |
| ACTAGTGTGTTTGATTACCA+AGG | - | chr6.2:56375956-56375975 | MS.gene38635:intron | 35.0% | |
| AGCTTATATACTAAAGCCTC+GGG | + | chr6.2:56374326-56374345 | None:intergenic | 35.0% | |
| ATGAACAAAGGGAGTAAACA+AGG | - | chr6.2:56375449-56375468 | MS.gene38635:intron | 35.0% | |
| ATTCATATCCAGCCATATCA+AGG | - | chr6.2:56374374-56374393 | MS.gene38635:CDS | 35.0% | |
| ATTGTTAAGATGGAAACCCT+TGG | - | chr6.2:56375476-56375495 | MS.gene38635:intron | 35.0% | |
| ATTTGAAAACGTTGCTTCCA+AGG | + | chr6.2:56375496-56375515 | None:intergenic | 35.0% | |
| CAACAGTAAAACAAAGCCAA+AGG | + | chr6.2:56373957-56373976 | None:intergenic | 35.0% | |
| CAATAATGGTCTTCACTCTT+CGG | + | chr6.2:56376793-56376812 | None:intergenic | 35.0% | |
| CCAACTTGGATTTAATCCAA+TGG | - | chr6.2:56373658-56373677 | MS.gene38635:CDS | 35.0% | |
| CCACTCATGAATCATATCAA+GGG | - | chr6.2:56376869-56376888 | MS.gene38635:CDS | 35.0% | |
| CCATCATATTGGTCAAGTAT+AGG | - | chr6.2:56374281-56374300 | MS.gene38635:intron | 35.0% | |
| CCATTGGATTAAATCCAAGT+TGG | + | chr6.2:56373661-56373680 | None:intergenic | 35.0% | |
| CCTATACTTGACCAATATGA+TGG | + | chr6.2:56374284-56374303 | None:intergenic | 35.0% | |
| CTCTGTAATTACTCAAGATC+CGG | - | chr6.2:56376430-56376449 | MS.gene38635:CDS | 35.0% | |
| GAAACAGTGTTACAAAAACC+CGG | + | chr6.2:56376348-56376367 | None:intergenic | 35.0% | |
| GACAATGTGATTGAACTTGA+TGG | - | chr6.2:56374092-56374111 | MS.gene38635:intron | 35.0% | |
| GATATTTACTCTCTCCATCA+AGG | + | chr6.2:56374965-56374984 | None:intergenic | 35.0% | |
| GTCAGCTACAGAAAAAGTTT+GGG | + | chr6.2:56374469-56374488 | None:intergenic | 35.0% | |
| GTGTACCTAAAAAATGCAAG+CGG | - | chr6.2:56375311-56375330 | MS.gene38635:intron | 35.0% | |
| GTGTTCCAACTCTCATAAAT+TGG | - | chr6.2:56377168-56377187 | MS.gene38635:intron | 35.0% | |
| TAAAAATACATTGGAGCCTG+GGG | - | chr6.2:56374241-56374260 | MS.gene38635:intron | 35.0% | |
| TACACATTACTACTACCACT+TGG | + | chr6.2:56375296-56375315 | None:intergenic | 35.0% | |
| TATATTCTGCTAAGGCTGTA+CGG | - | chr6.2:56374534-56374553 | MS.gene38635:intron | 35.0% | |
| TCACCGCCTTAAAAAAAATC+CGG | + | chr6.2:56376452-56376471 | None:intergenic | 35.0% | |
| TCATAAAATCTATGCGTGTC+TGG | - | chr6.2:56374133-56374152 | MS.gene38635:intron | 35.0% | |
| TCCACTCATGAATCATATCA+AGG | - | chr6.2:56376868-56376887 | MS.gene38635:CDS | 35.0% | |
| TGACCCAAACTCCATTAATT+CGG | + | chr6.2:56376762-56376781 | None:intergenic | 35.0% | |
| TGGTCCAACCGAAAATTTAT+CGG | - | chr6.2:56376246-56376265 | MS.gene38635:intron | 35.0% | |
| TGTACCTAAAAAATGCAAGC+GGG | - | chr6.2:56375312-56375331 | MS.gene38635:intron | 35.0% | |
| TGTCAGCTACAGAAAAAGTT+TGG | + | chr6.2:56374470-56374489 | None:intergenic | 35.0% | |
| TTAAAGGGCTAACCTTGATA+TGG | + | chr6.2:56374389-56374408 | None:intergenic | 35.0% | |
| TTGGATTTAATCCAATGGCT+CGG | - | chr6.2:56373663-56373682 | MS.gene38635:CDS | 35.0% | |
| TTTATTCCACCGAATGTAAG+GGG | - | chr6.2:56373915-56373934 | MS.gene38635:intron | 35.0% | |
| TTTCTCCTGCATTTATTGTG+AGG | - | chr6.2:56377238-56377257 | MS.gene38635:CDS | 35.0% | |
| TTTGAAAACGTTGCTTCCAA+GGG | + | chr6.2:56375495-56375514 | None:intergenic | 35.0% | |
| ! | CAAAAAACAGAGTGTCTAAG+TGG | - | chr6.2:56375237-56375256 | MS.gene38635:intron | 35.0% |
| ! | CAACGTTTTCAAATCTGTTC+CGG | - | chr6.2:56375502-56375521 | MS.gene38635:intron | 35.0% |
| ! | CTGAAAAGTAAGTGTTGTTG+AGG | - | chr6.2:56374441-56374460 | MS.gene38635:intron | 35.0% |
| ! | GTCTAAAGTGAAAACCAACT+TGG | - | chr6.2:56373644-56373663 | MS.gene38635:CDS | 35.0% |
| ! | TGAACCGATAAATTTTCGGT+TGG | + | chr6.2:56376253-56376272 | None:intergenic | 35.0% |
| ! | TTTCTTAGTTCTCTCTCTAC+TGG | - | chr6.2:56376393-56376412 | MS.gene38635:CDS | 35.0% |
| !! | ATCTCTCATGTTCAAGTTGT+TGG | - | chr6.2:56377207-56377226 | MS.gene38635:intron | 35.0% |
| !! | TTCTGAAATGAACCCAACAA+CGG | + | chr6.2:56375202-56375221 | None:intergenic | 35.0% |
| !!! | GATCCGGATTTTTTTTAAGG+CGG | - | chr6.2:56376446-56376465 | MS.gene38635:CDS | 35.0% |
| !!! | GTCTCGTGTGTATTTTTTCT+GGG | - | chr6.2:56374760-56374779 | MS.gene38635:intron | 35.0% |
| AACACTGTCAACGTGGTAAT+AGG | + | chr6.2:56376130-56376149 | None:intergenic | 40.0% | |
| AACCATTTGCTTCCTTGCAT+AGG | - | chr6.2:56375385-56375404 | MS.gene38635:intron | 40.0% | |
| AAGGCTGTACGGTTTAGATT+GGG | - | chr6.2:56374545-56374564 | MS.gene38635:intron | 40.0% | |
| AATGCAACTCACATGAGACA+TGG | + | chr6.2:56374672-56374691 | None:intergenic | 40.0% | |
| ACATGAGACATGGGAAATAC+AGG | + | chr6.2:56374662-56374681 | None:intergenic | 40.0% | |
| ACCATTTGCTTCCTTGCATA+GGG | - | chr6.2:56375386-56375405 | MS.gene38635:intron | 40.0% | |
| AGCCACTCTATTTGTGTGTT+CGG | + | chr6.2:56375078-56375097 | None:intergenic | 40.0% | |
| AGGAAGCTGCTACAAATATG+CGG | - | chr6.2:56375337-56375356 | MS.gene38635:intron | 40.0% | |
| AGGCATTTGTGACATTGTAC+AGG | - | chr6.2:56376576-56376595 | MS.gene38635:intron | 40.0% | |
| ATACTGACCAGACTGTCTAT+GGG | - | chr6.2:56376292-56376311 | MS.gene38635:intron | 40.0% | |
| ATAGAGCATAGAAAGCCTCT+AGG | - | chr6.2:56374923-56374942 | MS.gene38635:intron | 40.0% | |
| ATGAAGATGGCCCATCATAT+TGG | - | chr6.2:56374270-56374289 | MS.gene38635:intron | 40.0% | |
| ATGCAACTCACATGAGACAT+GGG | + | chr6.2:56374671-56374690 | None:intergenic | 40.0% | |
| ATTACTACTACCACTTGGCA+TGG | + | chr6.2:56375291-56375310 | None:intergenic | 40.0% | |
| CACACCGAATTAATGGAGTT+TGG | - | chr6.2:56376755-56376774 | MS.gene38635:CDS | 40.0% | |
| CACTTCCTCACAATAAATGC+AGG | + | chr6.2:56377246-56377265 | None:intergenic | 40.0% | |
| CATCTTCGAAGTAATCTGAC+AGG | + | chr6.2:56374505-56374524 | None:intergenic | 40.0% | |
| CCCTTGATATGATTCATGAG+TGG | + | chr6.2:56376872-56376891 | None:intergenic | 40.0% | |
| CTCAATGCTATGAACAACAC+CGG | + | chr6.2:56374069-56374088 | None:intergenic | 40.0% | |
| GATACATGAATAAGGTCACG+AGG | + | chr6.2:56373729-56373748 | None:intergenic | 40.0% | |
| GCTTGAACTAACGAACCATT+CGG | + | chr6.2:56376217-56376236 | None:intergenic | 40.0% | |
| GTAACATGTATGCAGTGATG+AGG | + | chr6.2:56376027-56376046 | None:intergenic | 40.0% | |
| TAAGGCTGTACGGTTTAGAT+TGG | - | chr6.2:56374544-56374563 | MS.gene38635:intron | 40.0% | |
| TATGCAAGGAAGCAAATGGT+TGG | + | chr6.2:56375386-56375405 | None:intergenic | 40.0% | |
| TGAACAACACCGGATATTTC+AGG | + | chr6.2:56374059-56374078 | None:intergenic | 40.0% | |
| TGATTCATGAGTGGACATAG+CGG | + | chr6.2:56376863-56376882 | None:intergenic | 40.0% | |
| TGCTACAAATATGCGGGAAA+GGG | - | chr6.2:56375344-56375363 | MS.gene38635:intron | 40.0% | |
| TTATTCCACCGAATGTAAGG+GGG | - | chr6.2:56373916-56373935 | MS.gene38635:intron | 40.0% | |
| ! | CCTTTTAAACAGCATGACCT+GGG | - | chr6.2:56375581-56375600 | MS.gene38635:intron | 40.0% |
| ! | TTTAAGGCGGTGAAATCTCA+TGG | - | chr6.2:56376459-56376478 | MS.gene38635:CDS | 40.0% |
| !! | CTCTGAGACAAGGCAAATAT+TGG | + | chr6.2:56374354-56374373 | None:intergenic | 40.0% |
| !! | GGATATGAATCTCTGAGACA+AGG | + | chr6.2:56374364-56374383 | None:intergenic | 40.0% |
| !!! | CGTCTCGTGTGTATTTTTTC+TGG | - | chr6.2:56374759-56374778 | MS.gene38635:intron | 40.0% |
| !!! | GAATTTTTTCAACAGAGCCC+AGG | + | chr6.2:56375601-56375620 | None:intergenic | 40.0% |
| AAAACACACACAGGCGAGAT+TGG | - | chr6.2:56376084-56376103 | MS.gene38635:intron | 45.0% | |
| AACAATACCAAGTCCAGCCT+TGG | + | chr6.2:56375976-56375995 | None:intergenic | 45.0% | |
| ACATCTCCACCAAACAGAAC+AGG | + | chr6.2:56376634-56376653 | None:intergenic | 45.0% | |
| ACTAAAGCCTCGGGAATAGA+AGG | + | chr6.2:56374317-56374336 | None:intergenic | 45.0% | |
| AGTCGTTCCTTATAGGACTG+AGG | + | chr6.2:56374166-56374185 | None:intergenic | 45.0% | |
| ATCCACCACTAATGACGACT+GGG | - | chr6.2:56374208-56374227 | MS.gene38635:intron | 45.0% | |
| CACCGAACACACAAATAGAG+TGG | - | chr6.2:56375073-56375092 | MS.gene38635:intron | 45.0% | |
| CAGTGTTACAAAAACCCGGA+TGG | + | chr6.2:56376344-56376363 | None:intergenic | 45.0% | |
| CATACTGACCAGACTGTCTA+TGG | - | chr6.2:56376291-56376310 | MS.gene38635:intron | 45.0% | |
| CCATTTGCTTCCTTGCATAG+GGG | - | chr6.2:56375387-56375406 | MS.gene38635:intron | 45.0% | |
| CGGTGATGACATGTCAACAA+AGG | - | chr6.2:56373683-56373702 | MS.gene38635:CDS | 45.0% | |
| CTGCTACAAATATGCGGGAA+AGG | - | chr6.2:56375343-56375362 | MS.gene38635:intron | 45.0% | |
| GAGATGCAGTCGTTCCTTAT+AGG | + | chr6.2:56374173-56374192 | None:intergenic | 45.0% | |
| GAGATTATCTAAGCCACTGC+AGG | - | chr6.2:56375171-56375190 | MS.gene38635:intron | 45.0% | |
| GGAAGCTGCTACAAATATGC+GGG | - | chr6.2:56375338-56375357 | MS.gene38635:intron | 45.0% | |
| GTATTTCCCTCACAAGCACA+GGG | - | chr6.2:56377290-56377309 | MS.gene38635:CDS | 45.0% | |
| GTCACGAGGATCATCCAAAT+AGG | + | chr6.2:56373715-56373734 | None:intergenic | 45.0% | |
| GTGAGTAGATCAGTGTCCTT+TGG | - | chr6.2:56373938-56373957 | MS.gene38635:intron | 45.0% | |
| GTGTGCTGCATTAAACCGAA+TGG | - | chr6.2:56376199-56376218 | MS.gene38635:intron | 45.0% | |
| GTGTGTTTGATTACCAAGGC+TGG | - | chr6.2:56375960-56375979 | MS.gene38635:intron | 45.0% | |
| GTTACAAAAACCCGGATGGT+CGG | + | chr6.2:56376340-56376359 | None:intergenic | 45.0% | |
| TATTTCCCTCACAAGCACAG+GGG | - | chr6.2:56377291-56377310 | MS.gene38635:CDS | 45.0% | |
| TCAAGCAAAGTCGTTTGCAG+AGG | + | chr6.2:56374028-56374047 | None:intergenic | 45.0% | |
| TCTACTCACCCCCTTACATT+CGG | + | chr6.2:56373927-56373946 | None:intergenic | 45.0% | |
| TGCTGCACACACCGAATTAA+TGG | - | chr6.2:56376748-56376767 | MS.gene38635:CDS | 45.0% | |
| TTGATTACCAAGGCTGGACT+TGG | - | chr6.2:56375966-56375985 | MS.gene38635:intron | 45.0% | |
| ! | ATTGTGAGGAAGTGTGAACG+TGG | - | chr6.2:56377252-56377271 | MS.gene38635:CDS | 45.0% |
| ! | CCCAGGTCATGCTGTTTAAA+AGG | + | chr6.2:56375584-56375603 | None:intergenic | 45.0% |
| ! | CTTTGGAGGCGTACTTTAGT+TGG | - | chr6.2:56375127-56375146 | MS.gene38635:intron | 45.0% |
| ! | GCCTTTTAAACAGCATGACC+TGG | - | chr6.2:56375580-56375599 | MS.gene38635:intron | 45.0% |
| !! | ATTTGTGTGTTCGGTGTGTG+TGG | + | chr6.2:56375069-56375088 | None:intergenic | 45.0% |
| !! | CGGTGTTGTTCATAGCATTG+AGG | - | chr6.2:56374067-56374086 | MS.gene38635:intron | 45.0% |
| !! | GACATAGCGGACAGATGAAA+AGG | + | chr6.2:56376850-56376869 | None:intergenic | 45.0% |
| !! | AAAAATAAATAAAAATATCT+TGG | + | chr6.2:56376166-56376185 | None:intergenic | 5.0% |
| !!! | TATTTATTTTTACATTAAAA+AGG | - | chr6.2:56376175-56376194 | MS.gene38635:intron | 5.0% |
| AAACTCCCCTGTGCTTGTGA+GGG | + | chr6.2:56377299-56377318 | None:intergenic | 50.0% | |
| AAGCAGACCCATAGACAGTC+TGG | + | chr6.2:56376302-56376321 | None:intergenic | 50.0% | |
| AAGCGATCCTTCTATTCCCG+AGG | - | chr6.2:56374307-56374326 | MS.gene38635:CDS | 50.0% | |
| AATACATTGGAGCCTGGGGA+TGG | - | chr6.2:56374245-56374264 | MS.gene38635:intron | 50.0% | |
| ACATGTCATCACCGAGCCAT+TGG | + | chr6.2:56373677-56373696 | None:intergenic | 50.0% | |
| ACCTAGTGCTCTGACACAGT+TGG | + | chr6.2:56375531-56375550 | None:intergenic | 50.0% | |
| ACTACTACCACTTGGCATGG+TGG | + | chr6.2:56375288-56375307 | None:intergenic | 50.0% | |
| AGGGCTAACCTTGATATGGC+TGG | + | chr6.2:56374385-56374404 | None:intergenic | 50.0% | |
| ATCTATGCGTGTCTGGCGTT+TGG | - | chr6.2:56374140-56374159 | MS.gene38635:intron | 50.0% | |
| CATCCACCACTAATGACGAC+TGG | - | chr6.2:56374207-56374226 | MS.gene38635:intron | 50.0% | |
| CCATCTTCATTTCCATCCCC+AGG | + | chr6.2:56374260-56374279 | None:intergenic | 50.0% | |
| CCCCTATGCAAGGAAGCAAA+TGG | + | chr6.2:56375390-56375409 | None:intergenic | 50.0% | |
| CCTGGGGATGGAAATGAAGA+TGG | - | chr6.2:56374257-56374276 | MS.gene38635:intron | 50.0% | |
| CGTTTGGCCTCAGTCCTATA+AGG | - | chr6.2:56374156-56374175 | MS.gene38635:intron | 50.0% | |
| CTAAAAAATGCAAGCGGGCG+AGG | - | chr6.2:56375317-56375336 | MS.gene38635:intron | 50.0% | |
| CTAAAGTACGCCTCCAAAGC+AGG | + | chr6.2:56375126-56375145 | None:intergenic | 50.0% | |
| GGGACAGTGGTCAGATTAGA+GGG | - | chr6.2:56375555-56375574 | MS.gene38635:intron | 50.0% | |
| GGTATTTCCCTCACAAGCAC+AGG | - | chr6.2:56377289-56377308 | MS.gene38635:CDS | 50.0% | |
| GGTCTTGAACACTGTCAACG+TGG | + | chr6.2:56376137-56376156 | None:intergenic | 50.0% | |
| GTTAAACCAGTCCGACCATC+CGG | - | chr6.2:56376326-56376345 | MS.gene38635:intron | 50.0% | |
| GTTCTGCTAGTGGAGCTGTT+AGG | - | chr6.2:56376652-56376671 | MS.gene38635:CDS | 50.0% | |
| GTTCTTTAGGCCCCTATGCA+AGG | + | chr6.2:56375400-56375419 | None:intergenic | 50.0% | |
| TGAGAGACACGACATGGAAG+TGG | - | chr6.2:56374571-56374590 | MS.gene38635:intron | 50.0% | |
| TGGGACAGTGGTCAGATTAG+AGG | - | chr6.2:56375554-56375573 | MS.gene38635:intron | 50.0% | |
| TGGTGGAGATGTTCTGCTAG+TGG | - | chr6.2:56376642-56376661 | MS.gene38635:CDS | 50.0% | |
| TTAAACCAGTCCGACCATCC+GGG | - | chr6.2:56376327-56376346 | MS.gene38635:intron | 50.0% | |
| TTCCTCCCAGTCGTCATTAG+TGG | + | chr6.2:56374216-56374235 | None:intergenic | 50.0% | |
| ! | AACGTGGAAGGTGTAGCTTG+AGG | - | chr6.2:56377268-56377287 | MS.gene38635:CDS | 50.0% |
| ! | TGAGGAAGTGTGAACGTGGA+AGG | - | chr6.2:56377256-56377275 | MS.gene38635:CDS | 50.0% |
| ! | TGTCAGAGCACTAGGTCACT+GGG | - | chr6.2:56375535-56375554 | MS.gene38635:intron | 50.0% |
| !! | ATGGTCGGACTGGTTTAACC+AGG | + | chr6.2:56376325-56376344 | None:intergenic | 50.0% |
| !!! | CGGGAAAGGGAGCTTTTTCA+GGG | - | chr6.2:56375357-56375376 | MS.gene38635:intron | 50.0% |
| !!! | CTCGCCCGCTTGCATTTTTT+AGG | + | chr6.2:56375319-56375338 | None:intergenic | 50.0% |
| !!! | GAAAGGGAGCTTTTTCAGGG+CGG | - | chr6.2:56375360-56375379 | MS.gene38635:intron | 50.0% |
| AAAAACCCGGATGGTCGGAC+TGG | + | chr6.2:56376335-56376354 | None:intergenic | 55.0% | |
| AACAACGGTGTAGCCTGCAG+TGG | + | chr6.2:56375187-56375206 | None:intergenic | 55.0% | |
| ACTCACCCCCTTACATTCGG+TGG | + | chr6.2:56373924-56373943 | None:intergenic | 55.0% | |
| ACTGCAGGCTACACCGTTGT+TGG | - | chr6.2:56375186-56375205 | MS.gene38635:intron | 55.0% | |
| CAAACTCCCCTGTGCTTGTG+AGG | + | chr6.2:56377300-56377319 | None:intergenic | 55.0% | |
| CACCACTAATGACGACTGGG+AGG | - | chr6.2:56374211-56374230 | MS.gene38635:intron | 55.0% | |
| CACTCAACCACCATGCCAAG+TGG | - | chr6.2:56375278-56375297 | MS.gene38635:intron | 55.0% | |
| CCACCAAACAGAACAGGCTC+AGG | + | chr6.2:56376628-56376647 | None:intergenic | 55.0% | |
| CCTGAGCCTGTTCTGTTTGG+TGG | - | chr6.2:56376625-56376644 | MS.gene38635:CDS | 55.0% | |
| CTCACAAGCACAGGGGAGTT+TGG | - | chr6.2:56377298-56377317 | MS.gene38635:CDS | 55.0% | |
| CTCCCAGTCGTCATTAGTGG+TGG | + | chr6.2:56374213-56374232 | None:intergenic | 55.0% | |
| CTGCAGGCTACACCGTTGTT+GGG | - | chr6.2:56375187-56375206 | MS.gene38635:intron | 55.0% | |
| CTGCCTGAGCCTGTTCTGTT+TGG | - | chr6.2:56376622-56376641 | MS.gene38635:CDS | 55.0% | |
| CTGTCTATGGGTCTGCTTCC+TGG | - | chr6.2:56376304-56376323 | MS.gene38635:intron | 55.0% | |
| TATGCCATCAAACCCCCGTC+AGG | - | chr6.2:56375099-56375118 | MS.gene38635:intron | 55.0% | |
| ! | GCCAACTGTGTCAGAGCACT+AGG | - | chr6.2:56375527-56375546 | MS.gene38635:intron | 55.0% |
| ! | GTGTCAGAGCACTAGGTCAC+TGG | - | chr6.2:56375534-56375553 | MS.gene38635:intron | 55.0% |
| !! | AGCACAGGGGAGTTTGGTGT+CGG | - | chr6.2:56377304-56377323 | MS.gene38635:CDS | 55.0% |
| !! | GCGGGAAAGGGAGCTTTTTC+AGG | - | chr6.2:56375356-56375375 | MS.gene38635:intron | 55.0% |
| !! | TGGTGTCGGTGCCGGTTTAT+CGG | - | chr6.2:56377318-56377337 | MS.gene38635:CDS | 55.0% |
| AGGTCCTGACGGGGGTTTGA+TGG | + | chr6.2:56375106-56375125 | None:intergenic | 60.0% | |
| CCTCCAAAGCAGGTCCTGAC+GGG | + | chr6.2:56375116-56375135 | None:intergenic | 60.0% | |
| CTCCAAAGCAGGTCCTGACG+GGG | + | chr6.2:56375115-56375134 | None:intergenic | 60.0% | |
| GCACTAGGTCACTGGGACAG+TGG | - | chr6.2:56375542-56375561 | MS.gene38635:intron | 60.0% | |
| GCCTCCAAAGCAGGTCCTGA+CGG | + | chr6.2:56375117-56375136 | None:intergenic | 60.0% | |
| GCTCTGACACAGTTGGCGAC+CGG | + | chr6.2:56375524-56375543 | None:intergenic | 60.0% | |
| GGGCTGTGAGAGACACGACA+TGG | - | chr6.2:56374565-56374584 | MS.gene38635:intron | 60.0% | |
| TCCAAAGCAGGTCCTGACGG+GGG | + | chr6.2:56375114-56375133 | None:intergenic | 60.0% | |
| TGCCGCCACCTCCGATAAAC+CGG | + | chr6.2:56377332-56377351 | None:intergenic | 60.0% | |
| ! | CACAGGCGAGATTGGCTCAG+TGG | - | chr6.2:56376092-56376111 | MS.gene38635:intron | 60.0% |
| ! | TATCGGAGGTGGCGGCAGAT+GGG | - | chr6.2:56377335-56377354 | MS.gene38635:CDS | 60.0% |
| ! | TTATCGGAGGTGGCGGCAGA+TGG | - | chr6.2:56377334-56377353 | MS.gene38635:CDS | 60.0% |
| !! | TGCCGGTTTATCGGAGGTGG+CGG | - | chr6.2:56377327-56377346 | MS.gene38635:CDS | 60.0% |
| !! | TGTCGGTGCCGGTTTATCGG+AGG | - | chr6.2:56377321-56377340 | MS.gene38635:CDS | 60.0% |
| ACCCCCGTCAGGACCTGCTT+TGG | - | chr6.2:56375110-56375129 | MS.gene38635:intron | 65.0% | |
| CCCGTCAGGACCTGCTTTGG+AGG | - | chr6.2:56375113-56375132 | MS.gene38635:intron | 65.0% | |
| ! | ATCGGAGGTGGCGGCAGATG+GGG | - | chr6.2:56377336-56377355 | MS.gene38635:CDS | 65.0% |
| !! | CGGTGCCGGTTTATCGGAGG+TGG | - | chr6.2:56377324-56377343 | MS.gene38635:CDS | 65.0% |
| !! | GGGGAGTTTGGTGTCGGTGC+CGG | - | chr6.2:56377310-56377329 | MS.gene38635:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 56373642 | 56377368 | 56373642 | ID=MS.gene38635 |
| chr6.2 | mRNA | 56373642 | 56377368 | 56373642 | ID=MS.gene38635.t1;Parent=MS.gene38635 |
| chr6.2 | exon | 56377233 | 56377368 | 56377233 | ID=MS.gene38635.t1.exon1;Parent=MS.gene38635.t1 |
| chr6.2 | CDS | 56377233 | 56377368 | 56377233 | ID=cds.MS.gene38635.t1;Parent=MS.gene38635.t1 |
| chr6.2 | exon | 56376615 | 56376998 | 56376615 | ID=MS.gene38635.t1.exon2;Parent=MS.gene38635.t1 |
| chr6.2 | CDS | 56376615 | 56376998 | 56376615 | ID=cds.MS.gene38635.t1;Parent=MS.gene38635.t1 |
| chr6.2 | exon | 56376331 | 56376500 | 56376331 | ID=MS.gene38635.t1.exon3;Parent=MS.gene38635.t1 |
| chr6.2 | CDS | 56376331 | 56376500 | 56376331 | ID=cds.MS.gene38635.t1;Parent=MS.gene38635.t1 |
| chr6.2 | exon | 56374297 | 56374412 | 56374297 | ID=MS.gene38635.t1.exon4;Parent=MS.gene38635.t1 |
| chr6.2 | CDS | 56374297 | 56374412 | 56374297 | ID=cds.MS.gene38635.t1;Parent=MS.gene38635.t1 |
| chr6.2 | exon | 56373642 | 56373804 | 56373642 | ID=MS.gene38635.t1.exon5;Parent=MS.gene38635.t1 |
| chr6.2 | CDS | 56373642 | 56373804 | 56373642 | ID=cds.MS.gene38635.t1;Parent=MS.gene38635.t1 |
| Gene Sequence |
| Protein sequence |
