Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39367.t1 | XP_003626788.2 | 67.3 | 364 | 6 | 1 | 1 | 251 | 1 | 364 | 9.40E-129 | 469.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39367.t1 | Q8H1S4 | 39.9 | 356 | 94 | 4 | 16 | 251 | 14 | 369 | 5.2e-67 | 255.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39367.t1 | G7LCL3 | 67.3 | 364 | 6 | 1 | 1 | 251 | 1 | 364 | 6.8e-129 | 469.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene39367 | 0.808293 | 3.33E-50 | -1.69E-46 |
| MS.gene050820 | MS.gene39367 | 0.802557 | 5.30E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene39367 | 0.826145 | 3.19E-54 | -1.69E-46 |
| MS.gene052176 | MS.gene39367 | 0.828983 | 6.64E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene39367 | 0.816754 | 4.70E-52 | -1.69E-46 |
| MS.gene052389 | MS.gene39367 | 0.807016 | 6.21E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene39367 | 0.817345 | 3.46E-52 | -1.69E-46 |
| MS.gene054473 | MS.gene39367 | 0.816792 | 4.61E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene39367 | 0.847077 | 1.45E-59 | -1.69E-46 |
| MS.gene054983 | MS.gene39367 | 0.849512 | 3.08E-60 | -1.69E-46 |
| MS.gene058710 | MS.gene39367 | 0.826951 | 2.05E-54 | -1.69E-46 |
| MS.gene058749 | MS.gene39367 | 0.807405 | 5.14E-50 | -1.69E-46 |
| MS.gene059285 | MS.gene39367 | 0.832395 | 9.69E-56 | -1.69E-46 |
| MS.gene05984 | MS.gene39367 | 0.805155 | 1.53E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene39367 | 0.817289 | 3.56E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39367.t1 | MTR_8g009090 | 85.294 | 204 | 30 | 0 | 1 | 204 | 1 | 204 | 2.55e-126 | 363 |
| MS.gene39367.t1 | MTR_8g009090 | 98.718 | 78 | 1 | 0 | 174 | 251 | 287 | 364 | 1.46e-47 | 161 |
| MS.gene39367.t1 | MTR_8g008930 | 81.951 | 205 | 36 | 1 | 1 | 204 | 1 | 205 | 5.44e-120 | 347 |
| MS.gene39367.t1 | MTR_8g008930 | 92.308 | 78 | 6 | 0 | 174 | 251 | 288 | 365 | 1.23e-43 | 151 |
| MS.gene39367.t1 | MTR_8g028435 | 74.510 | 204 | 52 | 0 | 1 | 204 | 1 | 204 | 3.05e-110 | 322 |
| MS.gene39367.t1 | MTR_8g028435 | 84.615 | 78 | 12 | 0 | 174 | 251 | 287 | 364 | 4.88e-39 | 139 |
| MS.gene39367.t1 | MTR_8g009160 | 73.529 | 204 | 54 | 0 | 1 | 204 | 1 | 204 | 2.21e-106 | 312 |
| MS.gene39367.t1 | MTR_8g009160 | 84.615 | 78 | 12 | 0 | 174 | 251 | 287 | 364 | 5.63e-40 | 141 |
| MS.gene39367.t1 | MTR_8g009170 | 83.429 | 175 | 28 | 1 | 1 | 174 | 1 | 175 | 5.90e-104 | 303 |
| MS.gene39367.t1 | MTR_8g009170 | 83.429 | 175 | 28 | 1 | 1 | 174 | 1 | 175 | 2.66e-103 | 304 |
| MS.gene39367.t1 | MTR_8g009170 | 81.013 | 79 | 14 | 1 | 174 | 251 | 288 | 366 | 1.03e-36 | 133 |
| MS.gene39367.t1 | MTR_8g009110 | 71.707 | 205 | 57 | 1 | 1 | 204 | 1 | 205 | 9.60e-102 | 300 |
| MS.gene39367.t1 | MTR_8g009110 | 87.179 | 78 | 10 | 0 | 174 | 251 | 288 | 365 | 2.13e-41 | 145 |
| MS.gene39367.t1 | MTR_8g009150 | 68.293 | 205 | 64 | 1 | 1 | 204 | 1 | 205 | 2.97e-95 | 283 |
| MS.gene39367.t1 | MTR_8g009150 | 79.487 | 78 | 16 | 0 | 174 | 251 | 268 | 345 | 1.65e-36 | 132 |
| MS.gene39367.t1 | MTR_8g009120 | 72.487 | 189 | 51 | 1 | 1 | 188 | 1 | 189 | 3.29e-94 | 281 |
| MS.gene39367.t1 | MTR_8g009120 | 82.500 | 80 | 14 | 0 | 172 | 251 | 274 | 353 | 3.83e-39 | 139 |
| MS.gene39367.t1 | MTR_4g117880 | 65.854 | 205 | 69 | 1 | 1 | 204 | 1 | 205 | 9.80e-94 | 280 |
| MS.gene39367.t1 | MTR_4g117880 | 73.418 | 79 | 20 | 1 | 174 | 251 | 288 | 366 | 1.14e-30 | 117 |
| MS.gene39367.t1 | MTR_2g069210 | 57.767 | 206 | 82 | 3 | 2 | 204 | 4 | 207 | 1.51e-74 | 231 |
| MS.gene39367.t1 | MTR_2g069210 | 71.795 | 78 | 22 | 0 | 174 | 251 | 290 | 367 | 9.19e-34 | 125 |
| MS.gene39367.t1 | MTR_2g069090 | 59.585 | 193 | 74 | 2 | 15 | 204 | 20 | 211 | 3.73e-73 | 228 |
| MS.gene39367.t1 | MTR_2g069090 | 74.359 | 78 | 20 | 0 | 174 | 251 | 295 | 372 | 6.34e-34 | 125 |
| MS.gene39367.t1 | MTR_2g069190 | 61.017 | 177 | 65 | 2 | 15 | 188 | 20 | 195 | 4.65e-70 | 219 |
| MS.gene39367.t1 | MTR_2g069190 | 73.077 | 78 | 21 | 0 | 174 | 251 | 294 | 371 | 1.73e-34 | 127 |
| MS.gene39367.t1 | MTR_2g069300 | 55.392 | 204 | 86 | 3 | 17 | 216 | 8 | 210 | 2.90e-69 | 217 |
| MS.gene39367.t1 | MTR_2g069300 | 60.256 | 78 | 31 | 0 | 174 | 251 | 281 | 358 | 4.64e-29 | 112 |
| MS.gene39367.t1 | MTR_8g009080 | 52.970 | 202 | 90 | 4 | 6 | 204 | 38 | 237 | 4.63e-61 | 195 |
| MS.gene39367.t1 | MTR_8g009080 | 52.970 | 202 | 90 | 4 | 6 | 204 | 38 | 237 | 8.68e-61 | 195 |
| MS.gene39367.t1 | MTR_8g009080 | 52.970 | 202 | 90 | 4 | 6 | 204 | 38 | 237 | 2.44e-60 | 195 |
| MS.gene39367.t1 | MTR_8g009080 | 70.513 | 78 | 23 | 0 | 174 | 251 | 320 | 397 | 6.82e-32 | 121 |
| MS.gene39367.t1 | MTR_1g043770 | 51.020 | 196 | 89 | 4 | 14 | 204 | 2 | 195 | 3.38e-58 | 189 |
| MS.gene39367.t1 | MTR_1g043770 | 60.256 | 78 | 31 | 0 | 174 | 251 | 278 | 355 | 7.12e-27 | 106 |
| MS.gene39367.t1 | MTR_1g043770 | 51.020 | 196 | 89 | 4 | 14 | 204 | 2 | 195 | 3.49e-58 | 187 |
| MS.gene39367.t1 | MTR_1g043760 | 54.023 | 174 | 76 | 3 | 17 | 188 | 9 | 180 | 1.11e-57 | 187 |
| MS.gene39367.t1 | MTR_1g043760 | 50.649 | 77 | 38 | 0 | 174 | 250 | 279 | 355 | 6.25e-17 | 79.3 |
| MS.gene39367.t1 | MTR_1g044105 | 51.765 | 170 | 72 | 4 | 17 | 178 | 9 | 176 | 8.54e-54 | 172 |
| MS.gene39367.t1 | MTR_1g043775 | 48.168 | 191 | 94 | 4 | 17 | 204 | 9 | 197 | 1.89e-53 | 175 |
| MS.gene39367.t1 | MTR_1g043775 | 48.168 | 191 | 94 | 4 | 17 | 204 | 9 | 197 | 6.03e-53 | 175 |
| MS.gene39367.t1 | MTR_1g043775 | 57.143 | 77 | 33 | 0 | 175 | 251 | 281 | 357 | 3.05e-24 | 99.8 |
| MS.gene39367.t1 | MTR_7g056347 | 43.269 | 208 | 108 | 4 | 4 | 204 | 6 | 210 | 1.64e-52 | 174 |
| MS.gene39367.t1 | MTR_7g056347 | 54.321 | 81 | 34 | 1 | 174 | 251 | 293 | 373 | 2.64e-22 | 94.7 |
| MS.gene39367.t1 | MTR_1g093140 | 42.326 | 215 | 112 | 3 | 1 | 204 | 3 | 216 | 5.54e-52 | 173 |
| MS.gene39367.t1 | MTR_1g093140 | 49.367 | 79 | 38 | 1 | 175 | 251 | 300 | 378 | 3.50e-17 | 80.1 |
| MS.gene39367.t1 | MTR_1g093120 | 42.381 | 210 | 113 | 4 | 1 | 204 | 3 | 210 | 1.72e-51 | 172 |
| MS.gene39367.t1 | MTR_1g093120 | 51.948 | 77 | 37 | 0 | 175 | 251 | 294 | 370 | 5.38e-20 | 88.2 |
| MS.gene39367.t1 | MTR_8g041600 | 48.315 | 178 | 84 | 3 | 17 | 188 | 22 | 197 | 1.76e-51 | 170 |
| MS.gene39367.t1 | MTR_4g119410 | 43.062 | 209 | 109 | 4 | 3 | 204 | 5 | 210 | 5.68e-51 | 171 |
| MS.gene39367.t1 | MTR_4g119410 | 56.250 | 80 | 32 | 1 | 175 | 251 | 294 | 373 | 2.78e-21 | 91.7 |
| MS.gene39367.t1 | MTR_1g043810 | 46.073 | 191 | 98 | 4 | 17 | 204 | 9 | 197 | 6.48e-51 | 169 |
| MS.gene39367.t1 | MTR_7g078010 | 43.269 | 208 | 108 | 4 | 4 | 204 | 6 | 210 | 8.93e-51 | 168 |
| MS.gene39367.t1 | MTR_8g041600 | 48.315 | 178 | 84 | 3 | 17 | 188 | 22 | 197 | 1.17e-50 | 170 |
| MS.gene39367.t1 | MTR_8g041600 | 58.228 | 79 | 32 | 1 | 174 | 251 | 296 | 374 | 1.25e-23 | 98.2 |
| MS.gene39367.t1 | MTR_1g043810 | 46.073 | 191 | 98 | 4 | 17 | 204 | 9 | 197 | 1.95e-50 | 169 |
| MS.gene39367.t1 | MTR_1g043810 | 57.143 | 77 | 33 | 0 | 175 | 251 | 281 | 357 | 2.66e-25 | 102 |
| MS.gene39367.t1 | MTR_8g006930 | 41.827 | 208 | 111 | 4 | 4 | 204 | 6 | 210 | 3.13e-50 | 169 |
| MS.gene39367.t1 | MTR_8g006930 | 54.321 | 81 | 34 | 1 | 174 | 251 | 293 | 373 | 8.22e-21 | 90.5 |
| MS.gene39367.t1 | MTR_7g078010 | 43.269 | 208 | 108 | 4 | 4 | 204 | 6 | 210 | 6.19e-50 | 168 |
| MS.gene39367.t1 | MTR_7g078010 | 46.914 | 81 | 40 | 1 | 174 | 251 | 293 | 373 | 2.68e-16 | 77.8 |
| MS.gene39367.t1 | MTR_8g063070 | 41.148 | 209 | 117 | 4 | 1 | 204 | 3 | 210 | 5.87e-49 | 165 |
| MS.gene39367.t1 | MTR_8g063070 | 50.000 | 80 | 37 | 1 | 175 | 251 | 294 | 373 | 1.79e-15 | 75.5 |
| MS.gene39367.t1 | MTR_8g062600 | 41.509 | 212 | 108 | 4 | 3 | 204 | 5 | 210 | 7.58e-49 | 165 |
| MS.gene39367.t1 | MTR_8g062600 | 51.250 | 80 | 36 | 1 | 175 | 251 | 294 | 373 | 2.31e-19 | 86.3 |
| MS.gene39367.t1 | MTR_8g041620 | 47.753 | 178 | 85 | 3 | 17 | 188 | 22 | 197 | 9.18e-49 | 165 |
| MS.gene39367.t1 | MTR_8g041620 | 55.696 | 79 | 34 | 1 | 174 | 251 | 296 | 374 | 1.80e-22 | 95.1 |
| MS.gene39367.t1 | MTR_4g024660 | 42.268 | 194 | 106 | 4 | 3 | 191 | 5 | 197 | 7.67e-47 | 160 |
| MS.gene39367.t1 | MTR_4g024660 | 51.250 | 80 | 36 | 1 | 175 | 251 | 294 | 373 | 1.07e-18 | 84.3 |
| MS.gene39367.t1 | MTR_4g099380 | 45.783 | 166 | 74 | 3 | 16 | 174 | 126 | 282 | 5.53e-45 | 152 |
| MS.gene39367.t1 | MTR_1g093110 | 41.063 | 207 | 107 | 5 | 16 | 210 | 18 | 221 | 6.49e-45 | 155 |
| MS.gene39367.t1 | MTR_1g093110 | 53.846 | 78 | 35 | 1 | 175 | 251 | 297 | 374 | 6.01e-20 | 88.2 |
| MS.gene39367.t1 | MTR_0032s0040 | 39.720 | 214 | 113 | 3 | 1 | 202 | 1 | 210 | 6.63e-45 | 155 |
| MS.gene39367.t1 | MTR_0032s0040 | 58.974 | 78 | 31 | 1 | 175 | 251 | 296 | 373 | 1.72e-24 | 100 |
| MS.gene39367.t1 | MTR_7g056393 | 44.382 | 178 | 89 | 4 | 4 | 174 | 6 | 180 | 1.09e-44 | 154 |
| MS.gene39367.t1 | MTR_7g056393 | 58.025 | 81 | 31 | 1 | 174 | 251 | 293 | 373 | 2.55e-23 | 97.4 |
| MS.gene39367.t1 | MTR_2g069020 | 46.296 | 162 | 82 | 3 | 16 | 173 | 19 | 179 | 7.66e-44 | 152 |
| MS.gene39367.t1 | MTR_2g069020 | 47.436 | 78 | 33 | 3 | 174 | 247 | 293 | 366 | 4.61e-12 | 65.5 |
| MS.gene39367.t1 | MTR_2g069020 | 46.296 | 162 | 82 | 3 | 16 | 173 | 19 | 179 | 1.66e-43 | 151 |
| MS.gene39367.t1 | MTR_2g069020 | 47.436 | 78 | 33 | 3 | 174 | 247 | 293 | 366 | 6.24e-12 | 65.1 |
| MS.gene39367.t1 | MTR_2g068950 | 44.068 | 177 | 93 | 4 | 1 | 173 | 1 | 175 | 5.37e-43 | 149 |
| MS.gene39367.t1 | MTR_2g068950 | 51.220 | 82 | 35 | 2 | 174 | 251 | 289 | 369 | 5.57e-16 | 76.6 |
| MS.gene39367.t1 | MTR_7g029655 | 41.436 | 181 | 95 | 2 | 15 | 188 | 15 | 191 | 2.06e-42 | 148 |
| MS.gene39367.t1 | MTR_7g029655 | 58.025 | 81 | 31 | 2 | 174 | 251 | 290 | 370 | 3.70e-23 | 97.1 |
| MS.gene39367.t1 | MTR_2g069010 | 45.062 | 162 | 84 | 3 | 16 | 173 | 21 | 181 | 2.53e-42 | 148 |
| MS.gene39367.t1 | MTR_2g069010 | 53.659 | 82 | 33 | 2 | 174 | 251 | 295 | 375 | 1.44e-17 | 81.3 |
| MS.gene39367.t1 | MTR_2g068960 | 44.633 | 177 | 92 | 4 | 1 | 173 | 1 | 175 | 7.02e-42 | 147 |
| MS.gene39367.t1 | MTR_2g068960 | 48.780 | 82 | 37 | 2 | 174 | 251 | 289 | 369 | 1.40e-15 | 75.5 |
| MS.gene39367.t1 | MTR_7g056370 | 39.326 | 178 | 101 | 3 | 18 | 191 | 2 | 176 | 1.10e-40 | 139 |
| MS.gene39367.t1 | MTR_2g069070 | 40.107 | 187 | 94 | 3 | 16 | 201 | 21 | 190 | 2.75e-39 | 135 |
| MS.gene39367.t1 | MTR_2g069060 | 44.242 | 165 | 75 | 2 | 16 | 180 | 21 | 168 | 9.50e-39 | 138 |
| MS.gene39367.t1 | MTR_2g069060 | 55.128 | 78 | 32 | 2 | 174 | 251 | 275 | 349 | 2.98e-20 | 88.6 |
| MS.gene39367.t1 | MTR_8g469400 | 42.775 | 173 | 81 | 5 | 3 | 170 | 5 | 164 | 2.91e-38 | 137 |
| MS.gene39367.t1 | MTR_8g469400 | 51.250 | 80 | 36 | 1 | 175 | 251 | 281 | 360 | 3.36e-19 | 85.9 |
| MS.gene39367.t1 | MTR_8g009180 | 80.769 | 78 | 15 | 0 | 174 | 251 | 217 | 294 | 1.02e-37 | 134 |
| MS.gene39367.t1 | MTR_8g009180 | 38.655 | 119 | 55 | 3 | 134 | 249 | 48 | 151 | 4.83e-15 | 73.6 |
| MS.gene39367.t1 | MTR_7g105070 | 39.634 | 164 | 94 | 2 | 19 | 179 | 15 | 176 | 4.41e-36 | 131 |
| MS.gene39367.t1 | MTR_2g069060 | 48.413 | 126 | 64 | 1 | 55 | 180 | 22 | 146 | 2.58e-35 | 127 |
| MS.gene39367.t1 | MTR_1g070185 | 40.994 | 161 | 89 | 2 | 17 | 174 | 23 | 180 | 4.77e-34 | 126 |
| MS.gene39367.t1 | MTR_1g070185 | 51.282 | 78 | 35 | 1 | 174 | 251 | 293 | 367 | 1.37e-18 | 84.3 |
| MS.gene39367.t1 | MTR_1g032220 | 38.182 | 165 | 94 | 2 | 19 | 179 | 28 | 188 | 1.84e-32 | 122 |
| MS.gene39367.t1 | MTR_8g008960 | 68.919 | 74 | 23 | 0 | 178 | 251 | 29 | 102 | 2.37e-32 | 114 |
| MS.gene39367.t1 | MTR_1g032140 | 36.170 | 188 | 112 | 2 | 5 | 188 | 7 | 190 | 2.01e-31 | 119 |
| MS.gene39367.t1 | MTR_1g032250 | 36.364 | 165 | 97 | 2 | 19 | 179 | 28 | 188 | 1.18e-30 | 117 |
| MS.gene39367.t1 | MTR_7g056353 | 33.161 | 193 | 100 | 4 | 16 | 207 | 23 | 187 | 8.63e-25 | 102 |
| MS.gene39367.t1 | MTR_7g056353 | 53.165 | 79 | 34 | 1 | 175 | 250 | 268 | 346 | 7.21e-17 | 79.7 |
| MS.gene39367.t1 | MTR_1g043840 | 56.757 | 74 | 31 | 1 | 71 | 144 | 256 | 328 | 1.69e-22 | 94.7 |
| MS.gene39367.t1 | MTR_4g099390 | 50.633 | 79 | 37 | 1 | 175 | 251 | 6 | 84 | 1.03e-18 | 78.6 |
| MS.gene39367.t1 | MTR_7g068650 | 31.944 | 144 | 86 | 4 | 19 | 153 | 6 | 146 | 1.33e-17 | 81.3 |
| MS.gene39367.t1 | MTR_3g091350 | 31.646 | 158 | 85 | 4 | 13 | 161 | 18 | 161 | 1.36e-16 | 78.6 |
| MS.gene39367.t1 | MTR_2g068850 | 31.788 | 151 | 96 | 4 | 27 | 174 | 21 | 167 | 4.55e-16 | 75.1 |
| MS.gene39367.t1 | MTR_2g068840 | 29.878 | 164 | 108 | 4 | 27 | 187 | 21 | 180 | 6.97e-16 | 76.6 |
| MS.gene39367.t1 | MTR_5g065010 | 27.586 | 174 | 120 | 4 | 27 | 194 | 3 | 176 | 7.80e-16 | 76.3 |
| MS.gene39367.t1 | MTR_2g068800 | 28.395 | 162 | 94 | 3 | 27 | 187 | 21 | 161 | 3.54e-15 | 73.6 |
| MS.gene39367.t1 | MTR_1g032230 | 32.000 | 150 | 74 | 3 | 3 | 148 | 7 | 132 | 1.21e-14 | 72.0 |
| MS.gene39367.t1 | MTR_1g062110 | 30.208 | 192 | 117 | 6 | 27 | 206 | 26 | 212 | 1.94e-14 | 72.4 |
| MS.gene39367.t1 | MTR_1g062110 | 30.208 | 192 | 117 | 6 | 27 | 206 | 26 | 212 | 2.63e-14 | 71.6 |
| MS.gene39367.t1 | MTR_5g048570 | 30.233 | 129 | 81 | 3 | 27 | 153 | 12 | 133 | 1.19e-13 | 70.1 |
| MS.gene39367.t1 | MTR_3g045230 | 29.091 | 165 | 105 | 4 | 27 | 185 | 17 | 175 | 2.89e-13 | 68.9 |
| MS.gene39367.t1 | MTR_7g062570 | 28.571 | 140 | 88 | 4 | 27 | 161 | 19 | 151 | 4.60e-13 | 68.2 |
| MS.gene39367.t1 | MTR_5g048850 | 31.818 | 154 | 82 | 7 | 28 | 166 | 13 | 158 | 6.95e-13 | 67.0 |
| MS.gene39367.t1 | MTR_5g048550 | 29.139 | 151 | 95 | 5 | 27 | 172 | 12 | 155 | 6.97e-13 | 67.8 |
| MS.gene39367.t1 | MTR_5g048850 | 31.818 | 154 | 82 | 7 | 28 | 166 | 13 | 158 | 9.86e-13 | 67.4 |
| MS.gene39367.t1 | MTR_3g070860 | 27.536 | 138 | 96 | 2 | 19 | 153 | 6 | 142 | 1.88e-12 | 66.6 |
| MS.gene39367.t1 | MTR_8g024120 | 32.407 | 108 | 69 | 2 | 46 | 153 | 29 | 132 | 2.01e-12 | 66.2 |
| MS.gene39367.t1 | MTR_5g055820 | 28.571 | 154 | 89 | 6 | 27 | 166 | 12 | 158 | 2.60e-12 | 66.2 |
| MS.gene39367.t1 | MTR_4g015790 | 25.000 | 208 | 125 | 6 | 19 | 201 | 5 | 206 | 2.71e-12 | 66.2 |
| MS.gene39367.t1 | MTR_5g055690 | 27.143 | 140 | 90 | 4 | 27 | 161 | 12 | 144 | 3.65e-12 | 65.1 |
| MS.gene39367.t1 | MTR_5g055690 | 27.143 | 140 | 90 | 4 | 27 | 161 | 12 | 144 | 4.68e-12 | 65.5 |
| MS.gene39367.t1 | MTR_0009s0410 | 28.462 | 130 | 82 | 4 | 28 | 153 | 12 | 134 | 6.95e-12 | 62.4 |
| MS.gene39367.t1 | MTR_3g043900 | 28.313 | 166 | 104 | 6 | 27 | 185 | 17 | 174 | 7.25e-12 | 64.7 |
| MS.gene39367.t1 | MTR_0009s0050 | 28.859 | 149 | 94 | 5 | 27 | 170 | 12 | 153 | 9.56e-12 | 64.3 |
| MS.gene39367.t1 | MTR_0009s0050 | 28.859 | 149 | 94 | 5 | 27 | 170 | 12 | 153 | 9.82e-12 | 64.3 |
| MS.gene39367.t1 | MTR_3g091360 | 35.165 | 91 | 56 | 2 | 39 | 126 | 28 | 118 | 1.01e-11 | 64.3 |
| MS.gene39367.t1 | MTR_7g081710 | 27.778 | 126 | 86 | 2 | 31 | 153 | 17 | 140 | 1.08e-11 | 64.3 |
| MS.gene39367.t1 | MTR_8g075830 | 33.913 | 115 | 71 | 4 | 41 | 153 | 19 | 130 | 1.24e-11 | 63.9 |
| MS.gene39367.t1 | MTR_7g062580 | 26.950 | 141 | 91 | 5 | 27 | 162 | 19 | 152 | 1.70e-11 | 63.5 |
| MS.gene39367.t1 | MTR_5g055900 | 29.870 | 154 | 87 | 7 | 27 | 166 | 12 | 158 | 2.80e-11 | 63.2 |
| MS.gene39367.t1 | MTR_5g048740 | 32.710 | 107 | 62 | 4 | 28 | 130 | 11 | 111 | 2.92e-11 | 62.8 |
| MS.gene39367.t1 | MTR_8g075890 | 33.898 | 118 | 73 | 4 | 41 | 156 | 19 | 133 | 2.95e-11 | 63.2 |
| MS.gene39367.t1 | MTR_5g032870 | 36.782 | 87 | 52 | 2 | 44 | 130 | 24 | 107 | 3.46e-11 | 62.8 |
| MS.gene39367.t1 | MTR_5g032880 | 36.782 | 87 | 52 | 2 | 44 | 130 | 362 | 445 | 4.45e-11 | 62.8 |
| MS.gene39367.t1 | MTR_3g092890 | 32.979 | 94 | 57 | 1 | 60 | 153 | 38 | 125 | 5.36e-11 | 62.0 |
| MS.gene39367.t1 | MTR_0009s0480 | 31.818 | 110 | 67 | 4 | 28 | 133 | 12 | 117 | 7.68e-11 | 61.2 |
| MS.gene39367.t1 | MTR_5g011250 | 28.313 | 166 | 106 | 4 | 60 | 215 | 47 | 209 | 8.86e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39367.t1 | AT1G06650 | 47.692 | 195 | 96 | 2 | 16 | 204 | 14 | 208 | 2.79e-58 | 187 |
| MS.gene39367.t1 | AT1G06650 | 47.692 | 195 | 96 | 2 | 16 | 204 | 14 | 208 | 7.89e-58 | 188 |
| MS.gene39367.t1 | AT1G06650 | 68.354 | 79 | 24 | 1 | 174 | 251 | 291 | 369 | 2.53e-32 | 121 |
| MS.gene39367.t1 | AT5G59540 | 53.614 | 166 | 70 | 4 | 15 | 174 | 12 | 176 | 9.29e-56 | 180 |
| MS.gene39367.t1 | AT1G06620 | 50.289 | 173 | 82 | 2 | 19 | 188 | 18 | 189 | 1.55e-55 | 180 |
| MS.gene39367.t1 | AT5G59540 | 53.614 | 166 | 70 | 4 | 15 | 174 | 12 | 176 | 4.19e-55 | 181 |
| MS.gene39367.t1 | AT5G59540 | 60.256 | 78 | 31 | 0 | 174 | 251 | 289 | 366 | 7.08e-27 | 107 |
| MS.gene39367.t1 | AT1G06640 | 45.545 | 202 | 103 | 3 | 9 | 204 | 8 | 208 | 1.08e-54 | 177 |
| MS.gene39367.t1 | AT2G30840 | 46.392 | 194 | 99 | 2 | 16 | 204 | 9 | 202 | 1.15e-54 | 178 |
| MS.gene39367.t1 | AT1G06620 | 50.289 | 173 | 82 | 2 | 19 | 188 | 18 | 189 | 1.22e-54 | 180 |
| MS.gene39367.t1 | AT1G06620 | 60.256 | 78 | 31 | 0 | 174 | 251 | 288 | 365 | 5.64e-27 | 107 |
| MS.gene39367.t1 | AT1G06640 | 45.545 | 202 | 103 | 3 | 9 | 204 | 8 | 208 | 1.34e-54 | 178 |
| MS.gene39367.t1 | AT2G30840 | 46.392 | 194 | 99 | 2 | 16 | 204 | 9 | 202 | 1.59e-54 | 179 |
| MS.gene39367.t1 | AT2G30840 | 58.228 | 79 | 31 | 2 | 174 | 251 | 285 | 362 | 1.03e-19 | 87.4 |
| MS.gene39367.t1 | AT2G30840 | 46.392 | 194 | 99 | 2 | 16 | 204 | 9 | 202 | 1.83e-54 | 179 |
| MS.gene39367.t1 | AT2G30840 | 56.790 | 81 | 33 | 2 | 172 | 251 | 277 | 356 | 7.47e-20 | 87.8 |
| MS.gene39367.t1 | AT1G06640 | 45.545 | 202 | 103 | 3 | 9 | 204 | 8 | 208 | 4.71e-54 | 178 |
| MS.gene39367.t1 | AT1G06640 | 60.759 | 79 | 30 | 1 | 174 | 251 | 291 | 369 | 2.98e-26 | 105 |
| MS.gene39367.t1 | AT1G04350 | 46.734 | 199 | 96 | 4 | 14 | 207 | 8 | 201 | 8.07e-54 | 177 |
| MS.gene39367.t1 | AT1G04350 | 63.158 | 76 | 27 | 1 | 177 | 251 | 285 | 360 | 2.56e-23 | 97.4 |
| MS.gene39367.t1 | AT2G30830 | 45.503 | 189 | 102 | 1 | 17 | 204 | 10 | 198 | 6.13e-53 | 175 |
| MS.gene39367.t1 | AT2G30830 | 55.696 | 79 | 33 | 2 | 174 | 251 | 281 | 358 | 2.71e-20 | 89.0 |
| MS.gene39367.t1 | AT1G06645 | 51.515 | 165 | 73 | 3 | 4 | 162 | 16 | 179 | 2.38e-51 | 172 |
| MS.gene39367.t1 | AT1G06645 | 63.291 | 79 | 28 | 1 | 174 | 251 | 301 | 379 | 4.10e-28 | 110 |
| MS.gene39367.t1 | AT5G59530 | 50.867 | 173 | 75 | 6 | 15 | 180 | 11 | 180 | 1.01e-50 | 169 |
| MS.gene39367.t1 | AT5G59530 | 58.974 | 78 | 32 | 0 | 174 | 251 | 287 | 364 | 5.07e-25 | 102 |
| MS.gene39367.t1 | AT2G25450 | 50.625 | 160 | 76 | 2 | 16 | 173 | 9 | 167 | 8.78e-49 | 164 |
| MS.gene39367.t1 | AT2G25450 | 55.000 | 80 | 33 | 3 | 174 | 251 | 281 | 359 | 1.97e-17 | 80.9 |
| MS.gene39367.t1 | AT1G03410 | 50.000 | 164 | 75 | 3 | 16 | 173 | 8 | 170 | 1.23e-48 | 164 |
| MS.gene39367.t1 | AT1G03410 | 49.367 | 79 | 38 | 2 | 174 | 251 | 284 | 361 | 1.30e-17 | 81.3 |
| MS.gene39367.t1 | AT1G03410 | 50.000 | 164 | 75 | 3 | 16 | 173 | 45 | 207 | 2.36e-48 | 164 |
| MS.gene39367.t1 | AT1G03410 | 49.367 | 79 | 38 | 2 | 174 | 251 | 321 | 398 | 1.76e-17 | 81.3 |
| MS.gene39367.t1 | AT5G43450 | 41.758 | 182 | 92 | 3 | 15 | 188 | 11 | 186 | 1.91e-46 | 156 |
| MS.gene39367.t1 | AT5G43450 | 41.758 | 182 | 92 | 3 | 15 | 188 | 11 | 186 | 7.17e-46 | 157 |
| MS.gene39367.t1 | AT5G43450 | 55.128 | 78 | 35 | 0 | 174 | 251 | 285 | 362 | 2.65e-20 | 89.0 |
| MS.gene39367.t1 | AT5G43440 | 42.541 | 181 | 95 | 3 | 15 | 188 | 11 | 189 | 7.58e-46 | 155 |
| MS.gene39367.t1 | AT3G61400 | 40.500 | 200 | 112 | 2 | 15 | 207 | 12 | 211 | 2.93e-45 | 154 |
| MS.gene39367.t1 | AT5G43440 | 42.541 | 181 | 95 | 3 | 15 | 188 | 11 | 189 | 4.38e-45 | 155 |
| MS.gene39367.t1 | AT5G43440 | 53.846 | 78 | 36 | 0 | 174 | 251 | 288 | 365 | 2.70e-21 | 91.7 |
| MS.gene39367.t1 | AT3G61400 | 41.089 | 202 | 108 | 3 | 15 | 207 | 12 | 211 | 1.26e-44 | 154 |
| MS.gene39367.t1 | AT3G61400 | 59.494 | 79 | 30 | 2 | 174 | 251 | 293 | 370 | 4.78e-23 | 96.7 |
| MS.gene39367.t1 | AT1G03400 | 43.889 | 180 | 88 | 3 | 16 | 191 | 8 | 178 | 2.00e-42 | 147 |
| MS.gene39367.t1 | AT1G03400 | 51.899 | 79 | 36 | 2 | 174 | 251 | 274 | 351 | 1.33e-16 | 78.6 |
| MS.gene39367.t1 | AT1G03400 | 43.889 | 180 | 88 | 3 | 16 | 191 | 8 | 178 | 5.80e-42 | 147 |
| MS.gene39367.t1 | AT1G03400 | 51.899 | 79 | 36 | 2 | 174 | 251 | 302 | 379 | 1.62e-16 | 78.6 |
| MS.gene39367.t1 | AT1G04380 | 44.375 | 160 | 71 | 3 | 16 | 174 | 13 | 155 | 2.15e-40 | 140 |
| MS.gene39367.t1 | AT1G04380 | 44.375 | 160 | 71 | 3 | 16 | 174 | 13 | 155 | 9.76e-40 | 140 |
| MS.gene39367.t1 | AT1G04380 | 61.538 | 78 | 30 | 0 | 174 | 251 | 268 | 345 | 1.63e-28 | 111 |
| MS.gene39367.t1 | AT1G55290 | 28.931 | 159 | 102 | 3 | 27 | 180 | 25 | 177 | 8.98e-20 | 87.4 |
| MS.gene39367.t1 | AT3G13610 | 27.848 | 158 | 104 | 3 | 27 | 180 | 26 | 177 | 1.35e-18 | 84.3 |
| MS.gene39367.t1 | AT3G12900 | 29.677 | 155 | 105 | 3 | 27 | 179 | 21 | 173 | 7.91e-15 | 73.6 |
| MS.gene39367.t1 | AT2G36690 | 30.657 | 137 | 84 | 3 | 25 | 153 | 18 | 151 | 1.36e-13 | 70.1 |
| MS.gene39367.t1 | AT2G36690 | 30.657 | 137 | 84 | 3 | 25 | 153 | 18 | 151 | 1.36e-13 | 70.1 |
| MS.gene39367.t1 | AT5G05600 | 31.707 | 123 | 79 | 2 | 56 | 174 | 58 | 179 | 1.47e-11 | 63.5 |
| MS.gene39367.t1 | AT2G38240 | 25.641 | 156 | 103 | 5 | 21 | 170 | 5 | 153 | 1.53e-11 | 63.9 |
| MS.gene39367.t1 | AT4G10500 | 28.829 | 111 | 76 | 1 | 60 | 170 | 44 | 151 | 1.59e-11 | 63.9 |
| MS.gene39367.t1 | AT3G19010 | 43.478 | 69 | 37 | 1 | 55 | 123 | 23 | 89 | 1.61e-11 | 63.5 |
| MS.gene39367.t1 | AT3G19010 | 43.478 | 69 | 37 | 1 | 55 | 123 | 23 | 89 | 1.65e-11 | 63.5 |
| MS.gene39367.t1 | AT3G19010 | 43.478 | 69 | 37 | 1 | 55 | 123 | 23 | 89 | 1.65e-11 | 63.5 |
| MS.gene39367.t1 | AT5G05600 | 31.707 | 123 | 79 | 2 | 56 | 174 | 58 | 179 | 1.91e-11 | 63.5 |
| MS.gene39367.t1 | AT3G19010 | 43.478 | 69 | 37 | 1 | 55 | 123 | 23 | 89 | 2.14e-11 | 63.2 |
| MS.gene39367.t1 | AT3G51240 | 34.921 | 126 | 76 | 5 | 34 | 156 | 10 | 132 | 4.79e-11 | 62.4 |
| MS.gene39367.t1 | AT2G44800 | 27.007 | 137 | 94 | 3 | 21 | 153 | 9 | 143 | 9.22e-11 | 61.6 |
Find 54 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTTATCAATATCTTTA+AGG | 0.109801 | 8.2:+81831289 | None:intergenic |
| AACTGTGGTTTCTCTGTATT+TGG | 0.141866 | 8.2:+81829641 | None:intergenic |
| TCTGATAATAGTTCCTTTAT+TGG | 0.252969 | 8.2:+81829675 | None:intergenic |
| GAAACAAAAGCAGGTGTAAA+AGG | 0.300249 | 8.2:-81831414 | MS.gene39367:CDS |
| GATGGATACAGATGCTAAAA+AGG | 0.316455 | 8.2:-81831130 | MS.gene39367:CDS |
| CTTTATTGGTCCATAGAGTT+TGG | 0.326576 | 8.2:+81829689 | None:intergenic |
| CATACAACAGGAAAATCTTC+TGG | 0.327118 | 8.2:+81830985 | None:intergenic |
| AACAGGAAAATCTTCTGGTT+TGG | 0.334664 | 8.2:+81830990 | None:intergenic |
| CAAACTCTATGGACCAATAA+AGG | 0.347608 | 8.2:-81829688 | MS.gene39367:CDS |
| AGGCCATCGTCCAAACTCTA+TGG | 0.353617 | 8.2:-81829699 | MS.gene39367:CDS |
| ATTAGGCTTGGTTGTATTAG+TGG | 0.360179 | 8.2:+81831473 | None:intergenic |
| ACAGGAAAATCTTCTGGTTT+GGG | 0.360417 | 8.2:+81830991 | None:intergenic |
| AATAACATGGCTTGTGTTGT+AGG | 0.361872 | 8.2:+81831323 | None:intergenic |
| ACTGTGGTTTCTCTGTATTT+GGG | 0.383668 | 8.2:+81829642 | None:intergenic |
| AAGCATGCAACGGATATTCT+TGG | 0.388966 | 8.2:+81829738 | None:intergenic |
| TCAAGGAAGCATGTGAAACT+TGG | 0.407695 | 8.2:-81831233 | MS.gene39367:CDS |
| TAGGCTATCTCATATTTGTC+AGG | 0.412342 | 8.2:+81831342 | None:intergenic |
| CATATTTGTCAGGTTGATGA+TGG | 0.413248 | 8.2:+81831352 | None:intergenic |
| TTTAATGCAAAAGGACTAGA+TGG | 0.415229 | 8.2:-81829600 | MS.gene39367:CDS |
| CTGAATGTGGAATCAAGATT+AGG | 0.417544 | 8.2:+81831456 | None:intergenic |
| TCTTCTGGTTTGGGAGTGTC+AGG | 0.420316 | 8.2:+81831000 | None:intergenic |
| GGATACTTGTACTTGTTCCT+TGG | 0.421196 | 8.2:-81831025 | MS.gene39367:CDS |
| GCAGCCTACTTTAATGCAAA+AGG | 0.427099 | 8.2:-81829609 | MS.gene39367:CDS |
| ATAGCTCACCAGCACTCAAT+TGG | 0.445033 | 8.2:-81831050 | MS.gene39367:CDS |
| ATATCTTTAAGGTCTATAAC+AGG | 0.449508 | 8.2:+81831300 | None:intergenic |
| ACAATCCCTTGATGAATACT+TGG | 0.466300 | 8.2:+81831264 | None:intergenic |
| CAAGGAAGCATGTGAAACTT+GGG | 0.488613 | 8.2:-81831232 | MS.gene39367:CDS |
| CATACATACCTGCATACAAC+AGG | 0.493126 | 8.2:+81830973 | None:intergenic |
| ATCTCCTCAAGAACACTCAA+AGG | 0.510634 | 8.2:+81831180 | None:intergenic |
| GAGTGTTCTTGAGGAGATGA+AGG | 0.513387 | 8.2:-81831175 | MS.gene39367:CDS |
| AAAGATCCAAGTATTCATCA+AGG | 0.518202 | 8.2:-81831270 | MS.gene39367:CDS |
| AGCTTTACGTTCGCTGAATG+TGG | 0.520538 | 8.2:+81831443 | None:intergenic |
| GCTCACCAGCACTCAATTGG+AGG | 0.527842 | 8.2:-81831047 | MS.gene39367:CDS |
| TCTCCTCAAGAACACTCAAA+GGG | 0.535297 | 8.2:+81831181 | None:intergenic |
| GTGGTTTCTCTGTATTTGGG+AGG | 0.538341 | 8.2:+81829645 | None:intergenic |
| AGGGATTGTTAGCAAAATCA+AGG | 0.538978 | 8.2:-81831250 | MS.gene39367:CDS |
| AGATGAAGGATGGTGTGAAG+AGG | 0.547649 | 8.2:-81831161 | MS.gene39367:CDS |
| GTAAAAGGACTTGTTGATGC+AGG | 0.552964 | 8.2:-81831399 | MS.gene39367:CDS |
| AATCCCTTTGAGTGTTCTTG+AGG | 0.553310 | 8.2:-81831184 | MS.gene39367:CDS |
| GGTTGATGATGGAATAAGCT+TGG | 0.560833 | 8.2:+81831363 | None:intergenic |
| TTTGGGAGTGTCAGGAGCCA+AGG | 0.560859 | 8.2:+81831008 | None:intergenic |
| GTATCCCTCCAATTGAGTGC+TGG | 0.565810 | 8.2:+81831042 | None:intergenic |
| TGTGAAGAGGTTTCATGAGA+TGG | 0.568486 | 8.2:-81831148 | MS.gene39367:CDS |
| AGAGTAGTTGCAAATCAAGT+TGG | 0.579220 | 8.2:-81829762 | MS.gene39367:CDS |
| TGTGGAATCAAGATTAGGCT+TGG | 0.581217 | 8.2:+81831461 | None:intergenic |
| AAGGAAGCATGTGAAACTTG+GGG | 0.598891 | 8.2:-81831231 | MS.gene39367:CDS |
| AAGATCCAAGTATTCATCAA+GGG | 0.612697 | 8.2:-81831269 | MS.gene39367:CDS |
| CTCACCAGCACTCAATTGGA+GGG | 0.626812 | 8.2:-81831046 | MS.gene39367:CDS |
| GTTCTTGAGGAGATGAAGGA+TGG | 0.628456 | 8.2:-81831171 | MS.gene39367:CDS |
| GGCTGCAAAATCAGCAACTG+TGG | 0.639927 | 8.2:+81829626 | None:intergenic |
| GGACGATGGCCTAAGACCTG+TGG | 0.664618 | 8.2:+81829710 | None:intergenic |
| GGTCTATAACAGGAATAACA+TGG | 0.672802 | 8.2:+81831310 | None:intergenic |
| AGGAAGCATGTGAAACTTGG+GGG | 0.692972 | 8.2:-81831230 | MS.gene39367:CDS |
| GGTCCATAGAGTTTGGACGA+TGG | 0.703355 | 8.2:+81829696 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAGTTGGTTTATATATA+TGG | + | chr8.2:81830254-81830273 | None:intergenic | 15.0% |
| !! | AAAATCATATCATATCCTAA+TGG | - | chr8.2:81830720-81830739 | MS.gene39367:intron | 20.0% |
| !! | AGATAATTAAGAGATAAGAT+AGG | - | chr8.2:81830303-81830322 | MS.gene39367:intron | 20.0% |
| !! | ATGAAAATAACTAAAGTTCA+AGG | + | chr8.2:81830132-81830151 | None:intergenic | 20.0% |
| !! | CTTGTAAAAAAAATATAGCA+TGG | - | chr8.2:81830462-81830481 | MS.gene39367:intron | 20.0% |
| !! | TAAATTCAATTTCAGACATT+TGG | + | chr8.2:81830806-81830825 | None:intergenic | 20.0% |
| !! | TTTATATATATGGATATCAG+AGG | + | chr8.2:81830244-81830263 | None:intergenic | 20.0% |
| !!! | ATATAATATAAAGCACCATT+AGG | + | chr8.2:81830738-81830757 | None:intergenic | 20.0% |
| !!! | ATATGAGTTAAAGTATCTAA+AGG | + | chr8.2:81830549-81830568 | None:intergenic | 20.0% |
| !!! | CTTTGTTATCAATATCTTTA+AGG | + | chr8.2:81829763-81829782 | None:intergenic | 20.0% |
| !!! | TGAACTTTAGTTATTTTCAT+TGG | - | chr8.2:81830132-81830151 | MS.gene39367:intron | 20.0% |
| !!! | TTTTTTCAAGTTGTTAATCA+TGG | - | chr8.2:81829842-81829861 | MS.gene39367:intron | 20.0% |
| ! | AAGTATCTAAAGGACAAAAA+AGG | + | chr8.2:81830539-81830558 | None:intergenic | 25.0% |
| ! | AGAGATATACTACTAGAATA+TGG | - | chr8.2:81830848-81830867 | MS.gene39367:intron | 25.0% |
| ! | AGTATCTAAAGGACAAAAAA+GGG | + | chr8.2:81830538-81830557 | None:intergenic | 25.0% |
| ! | ATCATACAATATATTTGACG+CGG | + | chr8.2:81830654-81830673 | None:intergenic | 25.0% |
| ! | CCAACTTATACGAAATATAA+AGG | - | chr8.2:81830264-81830283 | MS.gene39367:intron | 25.0% |
| ! | CCTTTATATTTCGTATAAGT+TGG | + | chr8.2:81830267-81830286 | None:intergenic | 25.0% |
| ! | GAGATATACTACTAGAATAT+GGG | - | chr8.2:81830849-81830868 | MS.gene39367:intron | 25.0% |
| ! | TCTGATAATAGTTCCTTTAT+TGG | + | chr8.2:81831377-81831396 | None:intergenic | 25.0% |
| ! | TGAACACATCTTTATCTAAA+GGG | + | chr8.2:81830167-81830186 | None:intergenic | 25.0% |
| ! | TTGAACACATCTTTATCTAA+AGG | + | chr8.2:81830168-81830187 | None:intergenic | 25.0% |
| !! | TTTTATACAAGAGATATGCA+TGG | - | chr8.2:81829944-81829963 | MS.gene39367:intron | 25.0% |
| !!! | ATATCTTTAAGGTCTATAAC+AGG | + | chr8.2:81829752-81829771 | None:intergenic | 25.0% |
| !!! | ATCATTTGTTATAAGCTACA+AGG | + | chr8.2:81831246-81831265 | None:intergenic | 25.0% |
| !!! | TAAGTTTTAACTACAGAGAT+AGG | + | chr8.2:81830410-81830429 | None:intergenic | 25.0% |
| AAAGATCCAAGTATTCATCA+AGG | - | chr8.2:81829779-81829798 | MS.gene39367:CDS | 30.0% | |
| AAGATCCAAGTATTCATCAA+GGG | - | chr8.2:81829780-81829799 | MS.gene39367:CDS | 30.0% | |
| AAGTTTAACAATGAGTCTTG+AGG | + | chr8.2:81830445-81830464 | None:intergenic | 30.0% | |
| CCAAACCATCTAAAAGATAT+GGG | - | chr8.2:81830935-81830954 | MS.gene39367:intron | 30.0% | |
| TCAATTTAGTGTTTGATGAG+AGG | - | chr8.2:81830347-81830366 | MS.gene39367:intron | 30.0% | |
| TCCAAACCATCTAAAAGATA+TGG | - | chr8.2:81830934-81830953 | MS.gene39367:intron | 30.0% | |
| TTTAATGCAAAAGGACTAGA+TGG | - | chr8.2:81831449-81831468 | MS.gene39367:CDS | 30.0% | |
| ! | TAGTCCTTTTGCATTAAAGT+AGG | + | chr8.2:81831447-81831466 | None:intergenic | 30.0% |
| AACTGTGGTTTCTCTGTATT+TGG | + | chr8.2:81831411-81831430 | None:intergenic | 35.0% | |
| AAGTTCTGTATGACGACAAA+TGG | - | chr8.2:81831092-81831111 | MS.gene39367:CDS | 35.0% | |
| ACAATCCCTTGATGAATACT+TGG | + | chr8.2:81829788-81829807 | None:intergenic | 35.0% | |
| ACTACTAGAATATGGGAAAC+AGG | - | chr8.2:81830856-81830875 | MS.gene39367:intron | 35.0% | |
| ACTGTGGTTTCTCTGTATTT+GGG | + | chr8.2:81831410-81831429 | None:intergenic | 35.0% | |
| AGAGTAGTTGCAAATCAAGT+TGG | - | chr8.2:81831287-81831306 | MS.gene39367:CDS | 35.0% | |
| AGGGATTGTTAGCAAAATCA+AGG | - | chr8.2:81829799-81829818 | MS.gene39367:intron | 35.0% | |
| ATTGATATAACACCTGTACC+TGG | - | chr8.2:81831115-81831134 | MS.gene39367:CDS | 35.0% | |
| CAAACTCTATGGACCAATAA+AGG | - | chr8.2:81831361-81831380 | MS.gene39367:CDS | 35.0% | |
| CACATCTTTATCTAAAGGGT+CGG | + | chr8.2:81830163-81830182 | None:intergenic | 35.0% | |
| CATACAACAGGAAAATCTTC+TGG | + | chr8.2:81830067-81830086 | None:intergenic | 35.0% | |
| CATGTACATGTGTAGCAAAT+GGG | - | chr8.2:81830779-81830798 | MS.gene39367:intron | 35.0% | |
| CGAAATATAAAGGCTGTGTT+TGG | - | chr8.2:81830274-81830293 | MS.gene39367:intron | 35.0% | |
| CTGAATGTGGAATCAAGATT+AGG | + | chr8.2:81829596-81829615 | None:intergenic | 35.0% | |
| CTTTATTGGTCCATAGAGTT+TGG | + | chr8.2:81831363-81831382 | None:intergenic | 35.0% | |
| GAAACAAAAGCAGGTGTAAA+AGG | - | chr8.2:81829635-81829654 | MS.gene39367:CDS | 35.0% | |
| GAAATCATTGTCACAATGCT+TGG | + | chr8.2:81831035-81831054 | None:intergenic | 35.0% | |
| GATGGATACAGATGCTAAAA+AGG | - | chr8.2:81829919-81829938 | MS.gene39367:intron | 35.0% | |
| GGAAATTATGCTTGAAACGA+TGG | + | chr8.2:81830517-81830536 | None:intergenic | 35.0% | |
| GGTCTATAACAGGAATAACA+TGG | + | chr8.2:81829742-81829761 | None:intergenic | 35.0% | |
| GTCACAAAGTTGTATGGTTT+GGG | - | chr8.2:81830484-81830503 | MS.gene39367:intron | 35.0% | |
| TAGGCTATCTCATATTTGTC+AGG | + | chr8.2:81829710-81829729 | None:intergenic | 35.0% | |
| TAGTGTTTGATGAGAGGATA+TGG | - | chr8.2:81830353-81830372 | MS.gene39367:intron | 35.0% | |
| TCATGTACATGTGTAGCAAA+TGG | - | chr8.2:81830778-81830797 | MS.gene39367:intron | 35.0% | |
| ! | AACAGGAAAATCTTCTGGTT+TGG | + | chr8.2:81830062-81830081 | None:intergenic | 35.0% |
| ! | AAGATTTTCCTGTTGTATGC+AGG | - | chr8.2:81830068-81830087 | MS.gene39367:intron | 35.0% |
| ! | AATAACATGGCTTGTGTTGT+AGG | + | chr8.2:81829729-81829748 | None:intergenic | 35.0% |
| ! | ATTAGGCTTGGTTGTATTAG+TGG | + | chr8.2:81829579-81829598 | None:intergenic | 35.0% |
| ! | CACAACCCATATCTTTTAGA+TGG | + | chr8.2:81830943-81830962 | None:intergenic | 35.0% |
| ! | CCCATATCTTTTAGATGGTT+TGG | + | chr8.2:81830938-81830957 | None:intergenic | 35.0% |
| ! | GCTTTTGATGAAACAAAAGC+AGG | - | chr8.2:81829626-81829645 | MS.gene39367:CDS | 35.0% |
| !! | ACAGGAAAATCTTCTGGTTT+GGG | + | chr8.2:81830061-81830080 | None:intergenic | 35.0% |
| !! | CATATTTGTCAGGTTGATGA+TGG | + | chr8.2:81829700-81829719 | None:intergenic | 35.0% |
| !!! | TAATGTTGGTGATCTTTTGC+AGG | - | chr8.2:81831150-81831169 | MS.gene39367:CDS | 35.0% |
| AAGCATGCAACGGATATTCT+TGG | + | chr8.2:81831314-81831333 | None:intergenic | 40.0% | |
| AATCCCTTTGAGTGTTCTTG+AGG | - | chr8.2:81829865-81829884 | MS.gene39367:intron | 40.0% | |
| AGCATGGTCACAAAGTTGTA+TGG | - | chr8.2:81830478-81830497 | MS.gene39367:intron | 40.0% | |
| ATCTCCTCAAGAACACTCAA+AGG | + | chr8.2:81829872-81829891 | None:intergenic | 40.0% | |
| CAGGACAAGGAGGATAATAA+TGG | + | chr8.2:81830988-81831007 | None:intergenic | 40.0% | |
| CATACATACCTGCATACAAC+AGG | + | chr8.2:81830079-81830098 | None:intergenic | 40.0% | |
| CTTCTACAAGACCATATTGG+TGG | - | chr8.2:81831064-81831083 | MS.gene39367:CDS | 40.0% | |
| GAACTTGAAGACCACCAATA+TGG | + | chr8.2:81831078-81831097 | None:intergenic | 40.0% | |
| GCAGCCTACTTTAATGCAAA+AGG | - | chr8.2:81831440-81831459 | MS.gene39367:CDS | 40.0% | |
| GGATACTTGTACTTGTTCCT+TGG | - | chr8.2:81830024-81830043 | MS.gene39367:intron | 40.0% | |
| GGGAAACAGGTAATGAATCT+AGG | - | chr8.2:81830869-81830888 | MS.gene39367:intron | 40.0% | |
| GGTCACAAAGTTGTATGGTT+TGG | - | chr8.2:81830483-81830502 | MS.gene39367:intron | 40.0% | |
| GTGCTTCTACAAGACCATAT+TGG | - | chr8.2:81831061-81831080 | MS.gene39367:CDS | 40.0% | |
| TCTCCTCAAGAACACTCAAA+GGG | + | chr8.2:81829871-81829890 | None:intergenic | 40.0% | |
| TGTGAAGAGGTTTCATGAGA+TGG | - | chr8.2:81829901-81829920 | MS.gene39367:intron | 40.0% | |
| TGTGGAATCAAGATTAGGCT+TGG | + | chr8.2:81829591-81829610 | None:intergenic | 40.0% | |
| ! | AAAGATATGGGTTGTGCTGA+AGG | - | chr8.2:81830947-81830966 | MS.gene39367:intron | 40.0% |
| ! | AAGATATGGGTTGTGCTGAA+GGG | - | chr8.2:81830948-81830967 | MS.gene39367:intron | 40.0% |
| ! | AAGGAAGCATGTGAAACTTG+GGG | - | chr8.2:81829818-81829837 | MS.gene39367:intron | 40.0% |
| ! | ACAAAGTTGTATGGTTTGGG+TGG | - | chr8.2:81830487-81830506 | MS.gene39367:intron | 40.0% |
| ! | CAAGGAAGCATGTGAAACTT+GGG | - | chr8.2:81829817-81829836 | MS.gene39367:intron | 40.0% |
| ! | TCAAGGAAGCATGTGAAACT+TGG | - | chr8.2:81829816-81829835 | MS.gene39367:intron | 40.0% |
| ! | TGTGGAGAAAAAGCATGCAA+CGG | + | chr8.2:81831324-81831343 | None:intergenic | 40.0% |
| !! | GCATTGTTGTCAGAAGCATT+AGG | - | chr8.2:81830905-81830924 | MS.gene39367:intron | 40.0% |
| !! | GGTTGATGATGGAATAAGCT+TGG | + | chr8.2:81829689-81829708 | None:intergenic | 40.0% |
| !! | GTAAAAGGACTTGTTGATGC+AGG | - | chr8.2:81829650-81829669 | MS.gene39367:CDS | 40.0% |
| ACATTAACTACGAGAGCTCC+AGG | + | chr8.2:81831136-81831155 | None:intergenic | 45.0% | |
| AGATGAAGGATGGTGTGAAG+AGG | - | chr8.2:81829888-81829907 | MS.gene39367:intron | 45.0% | |
| AGCTTTACGTTCGCTGAATG+TGG | + | chr8.2:81829609-81829628 | None:intergenic | 45.0% | |
| ATAGCTCACCAGCACTCAAT+TGG | - | chr8.2:81829999-81830018 | MS.gene39367:intron | 45.0% | |
| CAATGAGTCTTGAGGCATAG+TGG | + | chr8.2:81830437-81830456 | None:intergenic | 45.0% | |
| CCTGAACCAGAAATGACTGT+GGG | - | chr8.2:81831004-81831023 | MS.gene39367:CDS | 45.0% | |
| GAGTGTTCTTGAGGAGATGA+AGG | - | chr8.2:81829874-81829893 | MS.gene39367:intron | 45.0% | |
| GGAGCTCTCGTAGTTAATGT+TGG | - | chr8.2:81831136-81831155 | MS.gene39367:CDS | 45.0% | |
| GTGGTTTCTCTGTATTTGGG+AGG | + | chr8.2:81831407-81831426 | None:intergenic | 45.0% | |
| GTTCTTGAGGAGATGAAGGA+TGG | - | chr8.2:81829878-81829897 | MS.gene39367:intron | 45.0% | |
| GTTGTTCCCACAGTCATTTC+TGG | + | chr8.2:81831013-81831032 | None:intergenic | 45.0% | |
| TCCTGAACCAGAAATGACTG+TGG | - | chr8.2:81831003-81831022 | MS.gene39367:CDS | 45.0% | |
| ! | AGGAAGCATGTGAAACTTGG+GGG | - | chr8.2:81829819-81829838 | MS.gene39367:intron | 45.0% |
| !! | ATTTCTGGTTCAGGACAAGG+AGG | + | chr8.2:81830998-81831017 | None:intergenic | 45.0% |
| !! | GCTTTTTCTCCACAGGTCTT+AGG | - | chr8.2:81831330-81831349 | MS.gene39367:CDS | 45.0% |
| !! | GTCATTTCTGGTTCAGGACA+AGG | + | chr8.2:81831001-81831020 | None:intergenic | 45.0% |
| !!! | GTTGCATGCTTTTTCTCCAC+AGG | - | chr8.2:81831323-81831342 | MS.gene39367:CDS | 45.0% |
| AGGCCATCGTCCAAACTCTA+TGG | - | chr8.2:81831350-81831369 | MS.gene39367:CDS | 50.0% | |
| CTCACCAGCACTCAATTGGA+GGG | - | chr8.2:81830003-81830022 | MS.gene39367:intron | 50.0% | |
| GGCTGCAAAATCAGCAACTG+TGG | + | chr8.2:81831426-81831445 | None:intergenic | 50.0% | |
| GGTCCATAGAGTTTGGACGA+TGG | + | chr8.2:81831356-81831375 | None:intergenic | 50.0% | |
| GTATCCCTCCAATTGAGTGC+TGG | + | chr8.2:81830010-81830029 | None:intergenic | 50.0% | |
| !! | CCCACAGTCATTTCTGGTTC+AGG | + | chr8.2:81831007-81831026 | None:intergenic | 50.0% |
| !! | GGTCTTGTAGAAGCACTGTG+AGG | + | chr8.2:81831057-81831076 | None:intergenic | 50.0% |
| !! | TCTTCTGGTTTGGGAGTGTC+AGG | + | chr8.2:81830052-81830071 | None:intergenic | 50.0% |
| ACTACGAGAGCTCCAGGTAC+AGG | + | chr8.2:81831130-81831149 | None:intergenic | 55.0% | |
| GCTCACCAGCACTCAATTGG+AGG | - | chr8.2:81830002-81830021 | MS.gene39367:intron | 55.0% | |
| !! | TTTGGGAGTGTCAGGAGCCA+AGG | + | chr8.2:81830044-81830063 | None:intergenic | 55.0% |
| GGACGATGGCCTAAGACCTG+TGG | + | chr8.2:81831342-81831361 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 81829569 | 81831502 | 81829569 | ID=MS.gene39367 |
| chr8.2 | mRNA | 81829569 | 81831502 | 81829569 | ID=MS.gene39367.t1;Parent=MS.gene39367 |
| chr8.2 | exon | 81830982 | 81831502 | 81830982 | ID=MS.gene39367.t1.exon1;Parent=MS.gene39367.t1 |
| chr8.2 | CDS | 81830982 | 81831502 | 81830982 | ID=cds.MS.gene39367.t1;Parent=MS.gene39367.t1 |
| chr8.2 | exon | 81829569 | 81829803 | 81829569 | ID=MS.gene39367.t1.exon2;Parent=MS.gene39367.t1 |
| chr8.2 | CDS | 81829569 | 81829803 | 81829569 | ID=cds.MS.gene39367.t1;Parent=MS.gene39367.t1 |
| Gene Sequence |
| Protein sequence |
