Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42084.t1 | XP_003623564.1 | 84.5 | 316 | 13 | 1 | 1 | 280 | 1 | 316 | 2.40E-141 | 511.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42084.t1 | P22195 | 61.4 | 316 | 86 | 1 | 1 | 280 | 1 | 316 | 1.4e-100 | 367.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42084.t1 | G7KX22 | 84.5 | 316 | 13 | 1 | 1 | 280 | 1 | 316 | 1.7e-141 | 511.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051158 | MS.gene42084 | 0.805643 | 1.21E-49 | -1.69E-46 |
MS.gene05240 | MS.gene42084 | 0.821474 | 3.96E-53 | -1.69E-46 |
MS.gene053031 | MS.gene42084 | 0.805218 | 1.48E-49 | -1.69E-46 |
MS.gene053406 | MS.gene42084 | 0.842086 | 3.20E-58 | -1.69E-46 |
MS.gene054147 | MS.gene42084 | 0.816451 | 5.49E-52 | -1.69E-46 |
MS.gene054181 | MS.gene42084 | 0.805102 | 1.57E-49 | -1.69E-46 |
MS.gene054290 | MS.gene42084 | 0.80755 | 4.78E-50 | -1.69E-46 |
MS.gene054742 | MS.gene42084 | 0.814883 | 1.23E-51 | -1.69E-46 |
MS.gene055601 | MS.gene42084 | 0.829936 | 3.89E-55 | -1.69E-46 |
MS.gene056076 | MS.gene42084 | 0.800534 | 1.38E-48 | -1.69E-46 |
MS.gene056330 | MS.gene42084 | 0.800878 | 1.17E-48 | -1.69E-46 |
MS.gene056899 | MS.gene42084 | 0.82147 | 3.97E-53 | -1.69E-46 |
MS.gene058177 | MS.gene42084 | 0.801321 | 9.52E-49 | -1.69E-46 |
MS.gene058218 | MS.gene42084 | 0.823972 | 1.04E-53 | -1.69E-46 |
MS.gene059043 | MS.gene42084 | 0.816265 | 6.05E-52 | -1.69E-46 |
MS.gene059402 | MS.gene42084 | 0.801881 | 7.30E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42084.t1 | MTR_7g072480 | 84.494 | 316 | 13 | 1 | 1 | 280 | 1 | 316 | 0.0 | 530 |
MS.gene42084.t1 | MTR_7g072510 | 64.423 | 312 | 75 | 1 | 5 | 280 | 1 | 312 | 6.14e-142 | 402 |
MS.gene42084.t1 | MTR_4g029190 | 51.205 | 332 | 103 | 4 | 8 | 280 | 9 | 340 | 5.44e-109 | 319 |
MS.gene42084.t1 | MTR_4g029200 | 50.000 | 336 | 111 | 2 | 2 | 280 | 3 | 338 | 6.69e-108 | 316 |
MS.gene42084.t1 | MTR_1g115900 | 52.412 | 311 | 107 | 5 | 10 | 280 | 12 | 321 | 1.12e-104 | 308 |
MS.gene42084.t1 | MTR_3g094650 | 50.470 | 319 | 117 | 4 | 3 | 280 | 4 | 322 | 5.37e-102 | 301 |
MS.gene42084.t1 | MTR_5g083860 | 51.325 | 302 | 109 | 2 | 17 | 280 | 24 | 325 | 9.47e-102 | 300 |
MS.gene42084.t1 | MTR_3g466180 | 54.808 | 312 | 101 | 2 | 9 | 280 | 12 | 323 | 4.16e-100 | 296 |
MS.gene42084.t1 | MTR_2g084020 | 48.387 | 310 | 123 | 2 | 8 | 280 | 9 | 318 | 6.65e-100 | 295 |
MS.gene42084.t1 | MTR_3g466200 | 48.734 | 316 | 123 | 3 | 4 | 280 | 5 | 320 | 3.84e-98 | 291 |
MS.gene42084.t1 | MTR_2g084110 | 48.544 | 309 | 123 | 1 | 8 | 280 | 9 | 317 | 4.50e-97 | 288 |
MS.gene42084.t1 | MTR_2g084010 | 47.742 | 310 | 125 | 2 | 8 | 280 | 9 | 318 | 4.69e-96 | 285 |
MS.gene42084.t1 | MTR_2g084080 | 48.701 | 308 | 121 | 2 | 10 | 280 | 10 | 317 | 1.32e-95 | 284 |
MS.gene42084.t1 | MTR_5g074970 | 50.804 | 311 | 112 | 4 | 10 | 280 | 17 | 326 | 8.93e-95 | 282 |
MS.gene42084.t1 | MTR_3g094670 | 49.363 | 314 | 121 | 2 | 5 | 280 | 9 | 322 | 1.49e-93 | 279 |
MS.gene42084.t1 | MTR_7g026990 | 49.834 | 301 | 113 | 3 | 17 | 280 | 23 | 322 | 5.70e-92 | 275 |
MS.gene42084.t1 | MTR_2g084000 | 46.372 | 317 | 128 | 4 | 6 | 280 | 3 | 319 | 6.88e-92 | 275 |
MS.gene42084.t1 | MTR_4g029170 | 48.387 | 310 | 122 | 3 | 9 | 280 | 12 | 321 | 1.32e-91 | 274 |
MS.gene42084.t1 | MTR_3g072190 | 46.984 | 315 | 124 | 2 | 9 | 280 | 4 | 318 | 2.21e-91 | 273 |
MS.gene42084.t1 | MTR_2g084090 | 46.732 | 306 | 126 | 2 | 12 | 280 | 13 | 318 | 8.18e-90 | 270 |
MS.gene42084.t1 | MTR_3g094630 | 48.408 | 314 | 124 | 2 | 5 | 280 | 9 | 322 | 1.45e-89 | 269 |
MS.gene42084.t1 | MTR_3g072190 | 55.556 | 243 | 108 | 0 | 38 | 280 | 9 | 251 | 2.61e-89 | 266 |
MS.gene42084.t1 | MTR_4g083710 | 47.040 | 321 | 129 | 4 | 1 | 280 | 4 | 324 | 2.22e-88 | 266 |
MS.gene42084.t1 | MTR_4g029180 | 48.630 | 292 | 112 | 3 | 27 | 280 | 30 | 321 | 1.23e-86 | 261 |
MS.gene42084.t1 | MTR_4g074990 | 47.267 | 311 | 109 | 4 | 10 | 280 | 10 | 305 | 3.01e-85 | 257 |
MS.gene42084.t1 | MTR_7g072490 | 61.161 | 224 | 33 | 2 | 38 | 261 | 6 | 175 | 1.42e-83 | 249 |
MS.gene42084.t1 | MTR_4g074995 | 45.483 | 321 | 121 | 5 | 1 | 280 | 1 | 308 | 3.62e-83 | 252 |
MS.gene42084.t1 | MTR_5g074860 | 43.711 | 318 | 131 | 6 | 9 | 279 | 8 | 324 | 6.78e-81 | 247 |
MS.gene42084.t1 | MTR_5g074760 | 43.987 | 316 | 130 | 6 | 11 | 280 | 7 | 321 | 7.32e-79 | 242 |
MS.gene42084.t1 | MTR_5g017860 | 41.975 | 324 | 139 | 6 | 5 | 280 | 4 | 326 | 2.15e-77 | 238 |
MS.gene42084.t1 | MTR_5g074740 | 43.354 | 316 | 132 | 7 | 11 | 280 | 7 | 321 | 3.45e-77 | 238 |
MS.gene42084.t1 | MTR_5g074710 | 44.333 | 300 | 125 | 5 | 22 | 280 | 23 | 321 | 1.23e-75 | 233 |
MS.gene42084.t1 | MTR_4g074980 | 44.156 | 308 | 109 | 6 | 12 | 280 | 11 | 294 | 5.80e-75 | 231 |
MS.gene42084.t1 | MTR_5g017850 | 40.741 | 324 | 143 | 6 | 5 | 280 | 4 | 326 | 1.18e-74 | 231 |
MS.gene42084.t1 | MTR_4g122640 | 49.791 | 239 | 114 | 2 | 48 | 280 | 98 | 336 | 2.45e-74 | 231 |
MS.gene42084.t1 | MTR_5g021060 | 48.571 | 245 | 110 | 3 | 48 | 280 | 90 | 330 | 3.48e-74 | 230 |
MS.gene42084.t1 | MTR_8g076820 | 49.180 | 244 | 114 | 4 | 46 | 280 | 88 | 330 | 8.52e-74 | 229 |
MS.gene42084.t1 | MTR_5g014100 | 47.584 | 269 | 125 | 4 | 28 | 280 | 63 | 331 | 2.01e-72 | 226 |
MS.gene42084.t1 | MTR_3g467600 | 50.420 | 238 | 113 | 3 | 48 | 280 | 87 | 324 | 2.08e-72 | 225 |
MS.gene42084.t1 | MTR_2g040000 | 41.042 | 307 | 135 | 4 | 20 | 280 | 25 | 331 | 4.85e-71 | 222 |
MS.gene42084.t1 | MTR_4g125940 | 39.688 | 320 | 145 | 5 | 9 | 280 | 10 | 329 | 1.87e-70 | 220 |
MS.gene42084.t1 | MTR_1g022970 | 48.760 | 242 | 115 | 2 | 48 | 280 | 106 | 347 | 2.33e-70 | 221 |
MS.gene42084.t1 | MTR_2g029750 | 42.105 | 304 | 131 | 4 | 22 | 280 | 27 | 330 | 2.50e-70 | 221 |
MS.gene42084.t1 | MTR_2g029860 | 46.825 | 252 | 125 | 2 | 38 | 280 | 79 | 330 | 2.29e-69 | 218 |
MS.gene42084.t1 | MTR_7g093370 | 38.558 | 319 | 150 | 3 | 8 | 280 | 53 | 371 | 1.22e-68 | 217 |
MS.gene42084.t1 | MTR_1g054205 | 38.650 | 326 | 154 | 3 | 1 | 280 | 1 | 326 | 1.29e-68 | 216 |
MS.gene42084.t1 | MTR_2g028980 | 41.195 | 318 | 139 | 5 | 10 | 280 | 14 | 330 | 8.46e-68 | 214 |
MS.gene42084.t1 | MTR_4g074980 | 48.971 | 243 | 82 | 4 | 12 | 212 | 11 | 253 | 1.33e-67 | 211 |
MS.gene42084.t1 | MTR_5g049280 | 38.037 | 326 | 149 | 6 | 8 | 280 | 12 | 337 | 1.77e-67 | 213 |
MS.gene42084.t1 | MTR_2g029850 | 41.325 | 317 | 139 | 4 | 10 | 280 | 15 | 330 | 5.60e-67 | 212 |
MS.gene42084.t1 | MTR_2g029740 | 46.032 | 252 | 127 | 2 | 38 | 280 | 79 | 330 | 9.79e-67 | 212 |
MS.gene42084.t1 | MTR_2g029815 | 41.311 | 305 | 132 | 4 | 22 | 280 | 27 | 330 | 1.45e-66 | 211 |
MS.gene42084.t1 | MTR_4g125940 | 45.868 | 242 | 120 | 3 | 50 | 280 | 33 | 274 | 2.43e-66 | 208 |
MS.gene42084.t1 | MTR_2g029730 | 39.683 | 315 | 143 | 4 | 13 | 280 | 12 | 326 | 4.35e-66 | 210 |
MS.gene42084.t1 | MTR_2g029800 | 40.063 | 317 | 143 | 4 | 10 | 280 | 15 | 330 | 1.30e-65 | 209 |
MS.gene42084.t1 | MTR_2g029830 | 39.803 | 304 | 138 | 3 | 22 | 280 | 26 | 329 | 1.59e-64 | 206 |
MS.gene42084.t1 | MTR_2g029820 | 40.379 | 317 | 142 | 4 | 10 | 280 | 15 | 330 | 1.86e-64 | 206 |
MS.gene42084.t1 | MTR_2g029830 | 45.455 | 242 | 123 | 2 | 48 | 280 | 20 | 261 | 3.83e-64 | 203 |
MS.gene42084.t1 | MTR_3g092990 | 37.582 | 306 | 158 | 3 | 8 | 280 | 10 | 315 | 4.55e-64 | 204 |
MS.gene42084.t1 | MTR_2g029560 | 38.291 | 316 | 148 | 4 | 12 | 280 | 10 | 325 | 1.44e-63 | 203 |
MS.gene42084.t1 | MTR_2g008730 | 41.758 | 273 | 137 | 5 | 28 | 280 | 31 | 301 | 1.03e-62 | 199 |
MS.gene42084.t1 | MTR_3g092990 | 36.508 | 315 | 156 | 3 | 10 | 280 | 12 | 326 | 2.93e-62 | 199 |
MS.gene42084.t1 | MTR_2g029910 | 40.328 | 305 | 136 | 4 | 22 | 280 | 28 | 332 | 3.31e-62 | 200 |
MS.gene42084.t1 | MTR_2g008710 | 43.802 | 242 | 123 | 4 | 50 | 280 | 86 | 325 | 4.37e-61 | 196 |
MS.gene42084.t1 | MTR_5g074700 | 47.085 | 223 | 102 | 5 | 61 | 280 | 5 | 214 | 1.55e-60 | 191 |
MS.gene42084.t1 | MTR_0155s0040 | 37.874 | 301 | 145 | 6 | 17 | 280 | 20 | 315 | 5.41e-59 | 191 |
MS.gene42084.t1 | MTR_1g077000 | 36.025 | 322 | 158 | 7 | 3 | 280 | 10 | 327 | 8.25e-56 | 182 |
MS.gene42084.t1 | MTR_5g074860 | 36.164 | 318 | 116 | 7 | 9 | 279 | 8 | 285 | 1.11e-55 | 181 |
MS.gene42084.t1 | MTR_7g029030 | 33.968 | 315 | 169 | 4 | 5 | 280 | 6 | 320 | 3.08e-55 | 181 |
MS.gene42084.t1 | MTR_4g114210 | 33.956 | 321 | 165 | 5 | 5 | 280 | 2 | 320 | 3.94e-55 | 181 |
MS.gene42084.t1 | MTR_4g030890 | 40.800 | 250 | 138 | 3 | 38 | 280 | 150 | 396 | 1.03e-54 | 182 |
MS.gene42084.t1 | MTR_3g072210 | 51.351 | 185 | 88 | 2 | 98 | 280 | 54 | 238 | 7.48e-54 | 175 |
MS.gene42084.t1 | MTR_4g031140 | 40.000 | 250 | 140 | 3 | 38 | 280 | 78 | 324 | 7.71e-54 | 178 |
MS.gene42084.t1 | MTR_4g127670 | 44.541 | 229 | 116 | 5 | 62 | 280 | 96 | 323 | 1.66e-53 | 177 |
MS.gene42084.t1 | MTR_4g046713 | 33.333 | 318 | 167 | 5 | 7 | 280 | 10 | 326 | 2.64e-53 | 176 |
MS.gene42084.t1 | MTR_1g086320 | 41.564 | 243 | 129 | 4 | 50 | 280 | 92 | 333 | 3.17e-53 | 176 |
MS.gene42084.t1 | MTR_4g087965 | 41.841 | 239 | 129 | 4 | 48 | 276 | 104 | 342 | 1.61e-52 | 175 |
MS.gene42084.t1 | MTR_4g133800 | 38.367 | 245 | 139 | 4 | 44 | 280 | 93 | 333 | 2.90e-52 | 174 |
MS.gene42084.t1 | MTR_2g088770 | 33.651 | 315 | 164 | 6 | 10 | 280 | 12 | 325 | 3.07e-52 | 173 |
MS.gene42084.t1 | MTR_1g086490 | 41.365 | 249 | 128 | 4 | 50 | 280 | 92 | 340 | 3.01e-51 | 171 |
MS.gene42084.t1 | MTR_5g016010 | 41.071 | 224 | 123 | 2 | 62 | 276 | 102 | 325 | 4.01e-51 | 171 |
MS.gene42084.t1 | MTR_8g062780 | 33.333 | 324 | 167 | 5 | 5 | 280 | 2 | 324 | 2.45e-50 | 169 |
MS.gene42084.t1 | MTR_1g101830 | 33.651 | 315 | 160 | 6 | 10 | 280 | 13 | 322 | 4.94e-50 | 167 |
MS.gene42084.t1 | MTR_1g038680 | 39.095 | 243 | 138 | 3 | 48 | 280 | 90 | 332 | 1.45e-49 | 167 |
MS.gene42084.t1 | MTR_4g095450 | 35.806 | 310 | 147 | 8 | 14 | 276 | 16 | 320 | 2.55e-49 | 166 |
MS.gene42084.t1 | MTR_5g022870 | 34.675 | 323 | 161 | 8 | 1 | 280 | 1 | 316 | 4.36e-49 | 165 |
MS.gene42084.t1 | MTR_7g086820 | 39.496 | 238 | 134 | 5 | 48 | 280 | 80 | 312 | 2.88e-48 | 163 |
MS.gene42084.t1 | MTR_8g075100 | 35.000 | 300 | 146 | 5 | 24 | 280 | 26 | 319 | 7.99e-48 | 162 |
MS.gene42084.t1 | MTR_7g086870 | 40.086 | 232 | 134 | 4 | 50 | 280 | 84 | 311 | 1.01e-47 | 161 |
MS.gene42084.t1 | MTR_1g025980 | 34.483 | 319 | 159 | 8 | 5 | 279 | 5 | 317 | 2.02e-47 | 160 |
MS.gene42084.t1 | MTR_2g437770 | 38.333 | 240 | 135 | 5 | 49 | 280 | 107 | 341 | 3.96e-47 | 160 |
MS.gene42084.t1 | MTR_6g027440 | 38.589 | 241 | 139 | 5 | 45 | 280 | 78 | 314 | 4.56e-47 | 160 |
MS.gene42084.t1 | MTR_1g009750 | 38.158 | 228 | 132 | 2 | 62 | 280 | 101 | 328 | 5.40e-47 | 160 |
MS.gene42084.t1 | MTR_0286s0010 | 39.035 | 228 | 125 | 3 | 63 | 280 | 111 | 334 | 5.98e-47 | 160 |
MS.gene42084.t1 | MTR_6g008075 | 39.035 | 228 | 125 | 3 | 63 | 280 | 111 | 334 | 5.98e-47 | 160 |
MS.gene42084.t1 | MTR_2g067440 | 37.313 | 268 | 128 | 6 | 50 | 279 | 121 | 386 | 6.37e-47 | 161 |
MS.gene42084.t1 | MTR_6g043460 | 35.135 | 296 | 150 | 5 | 24 | 280 | 36 | 328 | 1.44e-46 | 159 |
MS.gene42084.t1 | MTR_2g077990 | 37.500 | 264 | 127 | 5 | 50 | 276 | 140 | 402 | 2.83e-46 | 160 |
MS.gene42084.t1 | MTR_1g090760 | 38.767 | 227 | 131 | 2 | 62 | 280 | 104 | 330 | 5.78e-46 | 157 |
MS.gene42084.t1 | MTR_2g008160 | 33.987 | 306 | 151 | 8 | 22 | 280 | 22 | 323 | 1.46e-45 | 156 |
MS.gene42084.t1 | MTR_6g043280 | 41.126 | 231 | 130 | 4 | 51 | 280 | 107 | 332 | 3.76e-45 | 155 |
MS.gene42084.t1 | MTR_2g078610 | 36.742 | 264 | 129 | 5 | 50 | 276 | 140 | 402 | 1.36e-44 | 155 |
MS.gene42084.t1 | MTR_0147s0010 | 36.948 | 249 | 129 | 4 | 58 | 279 | 134 | 381 | 7.88e-44 | 153 |
MS.gene42084.t1 | MTR_7g107520 | 31.529 | 314 | 167 | 6 | 11 | 280 | 11 | 320 | 8.54e-44 | 151 |
MS.gene42084.t1 | MTR_2g067450 | 38.174 | 241 | 133 | 6 | 50 | 279 | 74 | 309 | 1.22e-41 | 145 |
MS.gene42084.t1 | MTR_2g099175 | 34.156 | 243 | 145 | 4 | 50 | 280 | 96 | 335 | 2.17e-40 | 143 |
MS.gene42084.t1 | MTR_2g078280 | 36.220 | 254 | 124 | 5 | 50 | 266 | 140 | 392 | 3.85e-40 | 144 |
MS.gene42084.t1 | MTR_6g043240 | 39.352 | 216 | 128 | 3 | 66 | 280 | 118 | 331 | 9.17e-40 | 142 |
MS.gene42084.t1 | MTR_1g066710 | 30.000 | 300 | 168 | 4 | 22 | 280 | 25 | 323 | 2.63e-39 | 140 |
MS.gene42084.t1 | MTR_5g033470 | 36.626 | 243 | 141 | 5 | 50 | 280 | 136 | 377 | 5.14e-39 | 140 |
MS.gene42084.t1 | MTR_1g066380 | 31.873 | 251 | 161 | 3 | 35 | 280 | 10 | 255 | 3.56e-38 | 135 |
MS.gene42084.t1 | MTR_4g132490 | 29.012 | 324 | 183 | 5 | 3 | 280 | 5 | 327 | 8.03e-38 | 136 |
MS.gene42084.t1 | MTR_1g066380 | 31.873 | 251 | 161 | 3 | 35 | 280 | 78 | 323 | 1.86e-37 | 135 |
MS.gene42084.t1 | MTR_3g105790 | 32.787 | 244 | 145 | 3 | 51 | 280 | 8 | 246 | 1.40e-36 | 130 |
MS.gene42084.t1 | MTR_1g066640 | 32.271 | 251 | 160 | 3 | 35 | 280 | 78 | 323 | 2.30e-36 | 132 |
MS.gene42084.t1 | MTR_1g009750 | 31.788 | 302 | 176 | 5 | 8 | 280 | 11 | 311 | 2.34e-36 | 132 |
MS.gene42084.t1 | MTR_3g105790 | 32.787 | 244 | 145 | 3 | 51 | 280 | 84 | 322 | 5.23e-36 | 131 |
MS.gene42084.t1 | MTR_4g132110 | 30.364 | 247 | 162 | 3 | 35 | 276 | 83 | 324 | 7.23e-35 | 128 |
MS.gene42084.t1 | MTR_2g029880 | 40.000 | 190 | 95 | 4 | 100 | 280 | 9 | 188 | 9.42e-35 | 125 |
MS.gene42084.t1 | MTR_1g066680 | 28.428 | 299 | 173 | 4 | 22 | 280 | 25 | 322 | 1.43e-34 | 127 |
MS.gene42084.t1 | MTR_2g008160 | 31.000 | 300 | 133 | 8 | 22 | 280 | 22 | 288 | 2.13e-33 | 123 |
MS.gene42084.t1 | MTR_4g132110 | 29.762 | 252 | 162 | 4 | 35 | 276 | 83 | 329 | 1.75e-32 | 122 |
MS.gene42084.t1 | MTR_2g078560 | 32.883 | 222 | 111 | 5 | 93 | 276 | 95 | 316 | 2.12e-27 | 108 |
MS.gene42084.t1 | MTR_2g077980 | 31.884 | 276 | 142 | 9 | 50 | 280 | 11 | 285 | 1.65e-26 | 105 |
MS.gene42084.t1 | MTR_5g058120 | 37.342 | 158 | 95 | 2 | 119 | 276 | 2 | 155 | 3.46e-23 | 95.9 |
MS.gene42084.t1 | MTR_3g462850 | 39.716 | 141 | 73 | 4 | 152 | 280 | 9 | 149 | 1.54e-22 | 91.3 |
MS.gene42084.t1 | MTR_2g008160 | 34.706 | 170 | 75 | 3 | 22 | 157 | 22 | 189 | 5.13e-21 | 88.6 |
MS.gene42084.t1 | MTR_5g074770 | 40.206 | 97 | 55 | 2 | 185 | 279 | 13 | 108 | 3.33e-18 | 78.6 |
MS.gene42084.t1 | MTR_3g072260 | 40.909 | 110 | 29 | 1 | 23 | 96 | 25 | 134 | 6.28e-18 | 79.0 |
MS.gene42084.t1 | MTR_4g031040 | 33.529 | 170 | 70 | 4 | 48 | 214 | 2 | 131 | 2.34e-17 | 77.0 |
MS.gene42084.t1 | MTR_7g086790 | 40.566 | 106 | 59 | 2 | 49 | 154 | 31 | 132 | 1.09e-15 | 73.9 |
MS.gene42084.t1 | MTR_3g107060 | 28.638 | 213 | 98 | 6 | 61 | 263 | 146 | 314 | 3.33e-15 | 74.7 |
MS.gene42084.t1 | MTR_1g098320 | 44.595 | 74 | 41 | 0 | 203 | 276 | 47 | 120 | 5.64e-14 | 68.2 |
MS.gene42084.t1 | MTR_6g048160 | 63.830 | 47 | 16 | 1 | 50 | 96 | 42 | 87 | 1.71e-11 | 59.7 |
MS.gene42084.t1 | MTR_1g089005 | 57.407 | 54 | 22 | 1 | 49 | 102 | 82 | 134 | 7.11e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42084.t1 | AT5G05340 | 52.508 | 299 | 104 | 2 | 20 | 280 | 26 | 324 | 2.33e-102 | 301 |
MS.gene42084.t1 | AT5G58400 | 49.839 | 311 | 116 | 5 | 10 | 280 | 15 | 325 | 1.22e-94 | 282 |
MS.gene42084.t1 | AT5G58390 | 46.519 | 316 | 129 | 4 | 5 | 280 | 1 | 316 | 7.32e-89 | 267 |
MS.gene42084.t1 | AT1G14550 | 45.973 | 298 | 122 | 4 | 22 | 280 | 24 | 321 | 4.15e-80 | 245 |
MS.gene42084.t1 | AT4G36430 | 49.372 | 239 | 113 | 2 | 50 | 280 | 92 | 330 | 1.52e-77 | 239 |
MS.gene42084.t1 | AT2G18150 | 48.971 | 243 | 116 | 2 | 46 | 280 | 94 | 336 | 5.73e-77 | 238 |
MS.gene42084.t1 | AT1G14540 | 41.640 | 317 | 144 | 5 | 3 | 280 | 1 | 315 | 7.50e-76 | 234 |
MS.gene42084.t1 | AT2G18140 | 48.971 | 243 | 116 | 2 | 46 | 280 | 93 | 335 | 5.29e-74 | 230 |
MS.gene42084.t1 | AT5G66390 | 46.473 | 241 | 121 | 2 | 48 | 280 | 93 | 333 | 9.07e-72 | 224 |
MS.gene42084.t1 | AT2G38390 | 40.984 | 305 | 134 | 4 | 22 | 280 | 29 | 333 | 2.22e-71 | 223 |
MS.gene42084.t1 | AT3G50990 | 46.444 | 239 | 120 | 2 | 50 | 280 | 103 | 341 | 2.39e-70 | 221 |
MS.gene42084.t1 | AT1G44970 | 48.333 | 240 | 115 | 2 | 50 | 280 | 107 | 346 | 1.46e-69 | 219 |
MS.gene42084.t1 | AT5G06720 | 39.557 | 316 | 146 | 4 | 10 | 280 | 18 | 333 | 5.67e-69 | 217 |
MS.gene42084.t1 | AT2G35380 | 48.374 | 246 | 114 | 3 | 48 | 280 | 2 | 247 | 1.58e-68 | 213 |
MS.gene42084.t1 | AT4G16270 | 48.971 | 243 | 110 | 4 | 48 | 280 | 110 | 348 | 2.79e-68 | 216 |
MS.gene42084.t1 | AT2G35380 | 48.374 | 246 | 114 | 3 | 48 | 280 | 90 | 335 | 9.38e-68 | 214 |
MS.gene42084.t1 | AT5G06730 | 39.873 | 316 | 145 | 4 | 10 | 280 | 19 | 334 | 1.57e-67 | 214 |
MS.gene42084.t1 | AT4G08780 | 40.196 | 306 | 136 | 4 | 22 | 280 | 22 | 327 | 2.28e-67 | 213 |
MS.gene42084.t1 | AT5G19890 | 40.506 | 316 | 139 | 7 | 10 | 280 | 16 | 327 | 5.57e-67 | 211 |
MS.gene42084.t1 | AT3G32980 | 38.462 | 325 | 150 | 5 | 6 | 280 | 10 | 334 | 7.05e-67 | 212 |
MS.gene42084.t1 | AT4G08770 | 41.176 | 306 | 133 | 4 | 22 | 280 | 22 | 327 | 4.83e-66 | 209 |
MS.gene42084.t1 | AT2G38380 | 38.580 | 324 | 150 | 5 | 6 | 280 | 10 | 333 | 5.95e-65 | 207 |
MS.gene42084.t1 | AT1G68850 | 36.601 | 306 | 145 | 5 | 24 | 280 | 30 | 335 | 1.61e-64 | 206 |
MS.gene42084.t1 | AT3G49110 | 38.889 | 306 | 140 | 4 | 22 | 280 | 31 | 336 | 1.84e-63 | 203 |
MS.gene42084.t1 | AT3G49120 | 38.111 | 307 | 143 | 4 | 21 | 280 | 29 | 335 | 9.02e-62 | 199 |
MS.gene42084.t1 | AT1G49570 | 38.944 | 303 | 139 | 4 | 20 | 276 | 44 | 346 | 2.75e-61 | 197 |
MS.gene42084.t1 | AT5G64120 | 41.772 | 237 | 130 | 3 | 50 | 280 | 94 | 328 | 4.16e-59 | 191 |
MS.gene42084.t1 | AT5G19880 | 38.509 | 322 | 145 | 8 | 10 | 280 | 10 | 329 | 8.24e-59 | 191 |
MS.gene42084.t1 | AT4G33420 | 45.291 | 223 | 117 | 4 | 59 | 280 | 107 | 325 | 5.77e-58 | 188 |
MS.gene42084.t1 | AT4G33420 | 45.291 | 223 | 117 | 4 | 59 | 280 | 154 | 372 | 1.62e-57 | 188 |
MS.gene42084.t1 | AT5G15180 | 35.759 | 316 | 154 | 6 | 12 | 280 | 16 | 329 | 3.55e-57 | 186 |
MS.gene42084.t1 | AT2G22420 | 34.069 | 317 | 161 | 5 | 9 | 280 | 6 | 319 | 7.95e-57 | 186 |
MS.gene42084.t1 | AT5G14130 | 34.505 | 313 | 161 | 4 | 11 | 280 | 19 | 330 | 9.39e-57 | 185 |
MS.gene42084.t1 | AT5G14130 | 34.505 | 313 | 161 | 4 | 11 | 280 | 60 | 371 | 2.81e-56 | 185 |
MS.gene42084.t1 | AT4G30170 | 37.705 | 305 | 144 | 7 | 20 | 280 | 23 | 325 | 1.61e-55 | 182 |
MS.gene42084.t1 | AT2G18980 | 36.422 | 313 | 155 | 6 | 11 | 280 | 12 | 323 | 2.45e-55 | 181 |
MS.gene42084.t1 | AT5G67400 | 36.364 | 308 | 150 | 4 | 19 | 280 | 22 | 329 | 4.05e-55 | 181 |
MS.gene42084.t1 | AT3G01190 | 35.669 | 314 | 155 | 6 | 10 | 280 | 12 | 321 | 8.43e-55 | 180 |
MS.gene42084.t1 | AT5G17820 | 33.762 | 311 | 159 | 5 | 10 | 280 | 10 | 313 | 4.70e-54 | 178 |
MS.gene42084.t1 | AT5G40150 | 43.498 | 223 | 121 | 3 | 62 | 280 | 107 | 328 | 4.71e-54 | 178 |
MS.gene42084.t1 | AT1G05240 | 39.496 | 238 | 132 | 4 | 49 | 276 | 86 | 321 | 5.63e-54 | 178 |
MS.gene42084.t1 | AT1G05250 | 39.496 | 238 | 132 | 4 | 49 | 276 | 86 | 321 | 5.63e-54 | 178 |
MS.gene42084.t1 | AT3G28200 | 36.213 | 301 | 153 | 5 | 19 | 280 | 16 | 316 | 1.75e-53 | 176 |
MS.gene42084.t1 | AT5G17820 | 33.762 | 311 | 159 | 5 | 10 | 280 | 63 | 366 | 1.88e-53 | 178 |
MS.gene42084.t1 | AT5G39580 | 36.013 | 311 | 157 | 5 | 10 | 280 | 11 | 319 | 3.73e-53 | 176 |
MS.gene42084.t1 | AT4G11290 | 33.229 | 319 | 166 | 5 | 8 | 280 | 9 | 326 | 5.00e-52 | 173 |
MS.gene42084.t1 | AT1G30870 | 40.083 | 242 | 131 | 5 | 49 | 280 | 108 | 345 | 1.09e-51 | 173 |
MS.gene42084.t1 | AT3G03670 | 40.083 | 242 | 137 | 2 | 46 | 280 | 81 | 321 | 2.01e-51 | 171 |
MS.gene42084.t1 | AT4G37530 | 35.691 | 311 | 144 | 7 | 21 | 280 | 24 | 329 | 6.54e-51 | 170 |
MS.gene42084.t1 | AT2G41480 | 40.164 | 244 | 132 | 5 | 49 | 280 | 87 | 328 | 8.42e-51 | 170 |
MS.gene42084.t1 | AT1G71695 | 38.255 | 298 | 141 | 6 | 24 | 280 | 44 | 339 | 2.44e-50 | 169 |
MS.gene42084.t1 | AT3G49960 | 34.242 | 330 | 154 | 7 | 8 | 280 | 6 | 329 | 2.86e-50 | 169 |
MS.gene42084.t1 | AT5G51890 | 35.127 | 316 | 155 | 9 | 10 | 280 | 12 | 322 | 3.33e-50 | 168 |
MS.gene42084.t1 | AT1G05260 | 33.758 | 314 | 163 | 5 | 11 | 280 | 13 | 325 | 1.26e-49 | 167 |
MS.gene42084.t1 | AT4G33870 | 36.431 | 269 | 128 | 3 | 50 | 276 | 130 | 397 | 1.64e-49 | 169 |
MS.gene42084.t1 | AT4G37520 | 34.516 | 310 | 147 | 6 | 22 | 280 | 25 | 329 | 2.56e-49 | 166 |
MS.gene42084.t1 | AT5G64110 | 41.079 | 241 | 129 | 5 | 50 | 280 | 93 | 330 | 1.58e-48 | 164 |
MS.gene42084.t1 | AT1G34510 | 35.065 | 308 | 156 | 9 | 11 | 280 | 8 | 309 | 8.99e-48 | 161 |
MS.gene42084.t1 | AT4G37520 | 34.194 | 310 | 145 | 7 | 22 | 280 | 25 | 326 | 1.26e-47 | 162 |
MS.gene42084.t1 | AT1G77100 | 34.641 | 306 | 155 | 8 | 17 | 280 | 17 | 319 | 2.05e-47 | 161 |
MS.gene42084.t1 | AT4G26010 | 34.628 | 309 | 158 | 8 | 10 | 280 | 7 | 309 | 2.28e-47 | 160 |
MS.gene42084.t1 | AT5G47000 | 32.808 | 317 | 164 | 5 | 12 | 280 | 15 | 330 | 4.55e-47 | 160 |
MS.gene42084.t1 | AT4G26010 | 34.628 | 309 | 158 | 8 | 10 | 280 | 35 | 337 | 4.60e-47 | 160 |
MS.gene42084.t1 | AT4G17690 | 39.189 | 222 | 132 | 2 | 62 | 280 | 101 | 322 | 8.69e-47 | 159 |
MS.gene42084.t1 | AT1G24110 | 33.968 | 315 | 164 | 7 | 10 | 280 | 8 | 322 | 2.00e-46 | 158 |
MS.gene42084.t1 | AT4G31760 | 30.696 | 316 | 178 | 2 | 6 | 280 | 11 | 326 | 7.17e-46 | 157 |
MS.gene42084.t1 | AT2G34060 | 37.681 | 276 | 151 | 7 | 20 | 277 | 71 | 343 | 7.71e-46 | 157 |
MS.gene42084.t1 | AT3G21770 | 31.494 | 308 | 166 | 5 | 13 | 276 | 18 | 324 | 2.33e-45 | 155 |
MS.gene42084.t1 | AT5G64100 | 36.929 | 241 | 137 | 5 | 50 | 280 | 96 | 331 | 5.21e-45 | 155 |
MS.gene42084.t1 | AT2G39040 | 40.891 | 247 | 131 | 6 | 47 | 280 | 106 | 350 | 3.47e-44 | 153 |
MS.gene42084.t1 | AT2G24800 | 32.026 | 306 | 156 | 5 | 22 | 280 | 29 | 329 | 2.25e-42 | 148 |
MS.gene42084.t1 | AT4G25980 | 29.358 | 327 | 176 | 9 | 1 | 280 | 8 | 326 | 1.28e-41 | 146 |
MS.gene42084.t1 | AT5G42180 | 33.333 | 312 | 161 | 7 | 10 | 279 | 10 | 316 | 5.90e-41 | 144 |
MS.gene42084.t1 | AT4G37530 | 36.090 | 266 | 114 | 7 | 17 | 231 | 20 | 280 | 8.27e-41 | 142 |
MS.gene42084.t1 | AT2G37130 | 36.123 | 227 | 139 | 3 | 60 | 280 | 70 | 296 | 2.81e-39 | 139 |
MS.gene42084.t1 | AT2G37130 | 36.123 | 227 | 139 | 3 | 60 | 280 | 101 | 327 | 7.05e-39 | 139 |
MS.gene42084.t1 | AT5G24070 | 32.099 | 243 | 150 | 4 | 50 | 280 | 96 | 335 | 3.93e-35 | 129 |
MS.gene42084.t1 | AT2G43480 | 32.099 | 243 | 150 | 4 | 50 | 280 | 96 | 335 | 1.42e-34 | 127 |
MS.gene42084.t1 | AT5G22410 | 34.855 | 241 | 141 | 8 | 50 | 278 | 87 | 323 | 2.67e-34 | 127 |
MS.gene42084.t1 | AT4G21960 | 30.279 | 251 | 165 | 3 | 35 | 280 | 82 | 327 | 4.75e-34 | 126 |
MS.gene42084.t1 | AT3G17070 | 33.333 | 231 | 143 | 4 | 60 | 280 | 47 | 276 | 1.62e-31 | 118 |
MS.gene42084.t1 | AT3G17070 | 33.333 | 231 | 143 | 4 | 60 | 280 | 110 | 339 | 3.77e-31 | 119 |
MS.gene42084.t1 | AT5G39580 | 33.668 | 199 | 93 | 4 | 10 | 175 | 11 | 203 | 9.06e-23 | 94.4 |
MS.gene42084.t1 | AT2G24800 | 31.868 | 182 | 90 | 3 | 22 | 169 | 29 | 210 | 7.51e-18 | 80.9 |
MS.gene42084.t1 | AT4G25980 | 35.780 | 109 | 68 | 2 | 47 | 155 | 128 | 234 | 5.82e-16 | 76.6 |
MS.gene42084.t1 | AT1G77490 | 28.037 | 214 | 130 | 5 | 56 | 263 | 145 | 340 | 5.24e-14 | 72.0 |
MS.gene42084.t1 | AT1G77490 | 28.037 | 214 | 130 | 5 | 56 | 263 | 145 | 340 | 7.16e-14 | 71.6 |
MS.gene42084.t1 | AT4G32320 | 29.577 | 213 | 96 | 5 | 61 | 263 | 155 | 323 | 1.78e-13 | 69.7 |
MS.gene42084.t1 | AT3G42570 | 36.842 | 95 | 59 | 1 | 60 | 153 | 53 | 147 | 1.46e-12 | 64.3 |
Find 54 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTAAATCACCACCTGTTC+TGG | 0.201894 | 7.2:+31930241 | None:intergenic |
TCAGCACAAGAGACAGTATT+AGG | 0.244278 | 7.2:+31931180 | None:intergenic |
AGAGAAATGGTTGCTTTATC+AGG | 0.263605 | 7.2:-31930610 | MS.gene42084:intron |
TGCCAATGCAATGTTCAAAA+TGG | 0.285347 | 7.2:-31930048 | MS.gene42084:CDS |
GAGCTGAAATTGTGCCAATA+AGG | 0.346550 | 7.2:+31932284 | None:intergenic |
AAAATATGAACTTTGGTGAT+TGG | 0.370489 | 7.2:+31932319 | None:intergenic |
CCTCTCAGTGAATTTGCGTT+TGG | 0.374279 | 7.2:+31931249 | None:intergenic |
AATCAACTCTGAAGCTTAAC+GGG | 0.388194 | 7.2:+31930072 | None:intergenic |
TGATAAAGCAACCATTTCTC+TGG | 0.394331 | 7.2:+31930612 | None:intergenic |
CAAGAACTTGCAAAACCAAA+AGG | 0.408404 | 7.2:-31930168 | MS.gene42084:CDS |
AAATCAACTCTGAAGCTTAA+CGG | 0.414400 | 7.2:+31930071 | None:intergenic |
CAGAGTGAAAGAGACCCTTT+TGG | 0.418681 | 7.2:+31930153 | None:intergenic |
GATTCAACCACAGCAAGCTT+TGG | 0.426717 | 7.2:-31930715 | MS.gene42084:CDS |
ACATTTCAGCTTGGTGGACT+TGG | 0.430049 | 7.2:-31930763 | MS.gene42084:intron |
CAGCACAAGAGACAGTATTA+GGG | 0.445413 | 7.2:+31931181 | None:intergenic |
TTTAAATCACCACCTGTTCT+GGG | 0.445460 | 7.2:+31930242 | None:intergenic |
ACTTGGTTGGAATGTTCAAT+TGG | 0.448429 | 7.2:-31930746 | MS.gene42084:CDS |
AGGTTTCACACCCAGAGAAA+TGG | 0.454533 | 7.2:-31930623 | MS.gene42084:CDS |
TAAGCATTGTCAAATGTCTC+TGG | 0.458481 | 7.2:+31930194 | None:intergenic |
GGAATGTTCAATTGGGAAGA+AGG | 0.459077 | 7.2:-31930738 | MS.gene42084:CDS |
ATTATAGGATCGCACACAAT+TGG | 0.459237 | 7.2:-31930353 | MS.gene42084:intron |
TGTTCTGAAGAATCTACAAC+TGG | 0.463346 | 7.2:+31930325 | None:intergenic |
CAATCAAGTTGTCCCAGAAC+AGG | 0.469147 | 7.2:-31930254 | MS.gene42084:CDS |
CTGAACACATTTCAGCTTGG+TGG | 0.485006 | 7.2:-31930769 | MS.gene42084:intron |
AACTCAGATTTACCTGGTCC+TGG | 0.486375 | 7.2:-31930685 | MS.gene42084:CDS |
GAATGTTCAATTGGGAAGAA+GGG | 0.494802 | 7.2:-31930737 | MS.gene42084:CDS |
TTCAGCTTGGTGGACTTGGT+TGG | 0.497239 | 7.2:-31930759 | MS.gene42084:intron |
TATGAACTTTGGTGATTGGA+AGG | 0.501423 | 7.2:+31932323 | None:intergenic |
AAAAGAAGTCATTTCTGCTG+TGG | 0.508271 | 7.2:-31932206 | MS.gene42084:CDS |
GAGTACGAAAATATGAACTT+TGG | 0.523744 | 7.2:+31932312 | None:intergenic |
CTTGGTTGGAATGTTCAATT+GGG | 0.524320 | 7.2:-31930745 | MS.gene42084:CDS |
AAGAACTTGCAAAACCAAAA+GGG | 0.543758 | 7.2:-31930167 | MS.gene42084:CDS |
AAAGAAGTCATTTCTGCTGT+GGG | 0.544149 | 7.2:-31932205 | MS.gene42084:intron |
ATGTTCAAAATGGCGAACCT+TGG | 0.559997 | 7.2:-31930038 | MS.gene42084:CDS |
CTTAGATCAGAACCAGGACC+AGG | 0.571660 | 7.2:+31930673 | None:intergenic |
CACAAGTTAATTCTTACGCT+AGG | 0.574958 | 7.2:-31930097 | MS.gene42084:CDS |
TTAATGGTTGAAAGCACAAG+TGG | 0.587684 | 7.2:+31932229 | None:intergenic |
GTTGTAGATTCTTCAGAACA+AGG | 0.591250 | 7.2:-31930322 | MS.gene42084:CDS |
GATAAAGCAACCATTTCTCT+GGG | 0.594650 | 7.2:+31930613 | None:intergenic |
GACCACTAGACCCCGTGAGG+GGG | 0.599802 | 7.2:+31930015 | None:intergenic |
GGTCCTGGTTCTGATCTAAG+TGG | 0.604228 | 7.2:-31930670 | MS.gene42084:CDS |
TCAGCTAACTCAGATTTACC+TGG | 0.607101 | 7.2:-31930691 | MS.gene42084:CDS |
TGACCACTAGACCCCGTGAG+GGG | 0.610130 | 7.2:+31930014 | None:intergenic |
AGCTGAACCAAAGCTTGCTG+TGG | 0.632624 | 7.2:+31930708 | None:intergenic |
TTGACCACTAGACCCCGTGA+GGG | 0.633592 | 7.2:+31930013 | None:intergenic |
GTCAAATGTCTCTGGAGTGG+TGG | 0.637737 | 7.2:+31930202 | None:intergenic |
TGTAGCAGCAAGAGATTCCG+TGG | 0.650913 | 7.2:-31931148 | MS.gene42084:CDS |
TCAAGTTGTCCCAGAACAGG+TGG | 0.651110 | 7.2:-31930251 | MS.gene42084:CDS |
TCTGGAGTGGTGGTATCAAG+TGG | 0.673011 | 7.2:+31930212 | None:intergenic |
AGACCACTTAGATCAGAACC+AGG | 0.679668 | 7.2:+31930667 | None:intergenic |
ATATATACTTACAGCAACCA+CGG | 0.692119 | 7.2:+31931131 | None:intergenic |
CTTGACCACTAGACCCCGTG+AGG | 0.696773 | 7.2:+31930012 | None:intergenic |
ATTGTCAAATGTCTCTGGAG+TGG | 0.708738 | 7.2:+31930199 | None:intergenic |
CCAAACGCAAATTCACTGAG+AGG | 0.715771 | 7.2:-31931249 | MS.gene42084:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAACTTTAATGT+TGG | - | chr7.2:31931326-31931345 | MS.gene42084:intron | 10.0% |
!! | TTAATTTCTAAATAATATGT+AGG | - | chr7.2:31930293-31930312 | MS.gene42084:CDS | 10.0% |
!!! | AATAGAGATAATTATTTTTA+AGG | + | chr7.2:31930948-31930967 | None:intergenic | 10.0% |
!!! | TTTGAACAAAAAATTAATTT+TGG | - | chr7.2:31930682-31930701 | MS.gene42084:CDS | 10.0% |
!! | AAAGGAAAAAAAAAATTGAA+TGG | - | chr7.2:31930459-31930478 | MS.gene42084:intron | 15.0% |
!! | AACTAACTTTATTGTATTAT+AGG | - | chr7.2:31931943-31931962 | MS.gene42084:intron | 15.0% |
!! | TAATAAATAAATCAACTAGT+TGG | + | chr7.2:31930801-31930820 | None:intergenic | 15.0% |
!! | TTTAGTTAAAATAATGTGTA+GGG | + | chr7.2:31930658-31930677 | None:intergenic | 15.0% |
!!! | ATACACGTTTTTTTTTTTTA+GGG | - | chr7.2:31930978-31930997 | MS.gene42084:intron | 15.0% |
!! | AAATACGTAATCTATACAAA+CGG | - | chr7.2:31931296-31931315 | MS.gene42084:intron | 20.0% |
!! | CTAAAAAAAAAAAACGTGTA+TGG | + | chr7.2:31930979-31930998 | None:intergenic | 20.0% |
!! | CTTTAGTTAAAATAATGTGT+AGG | + | chr7.2:31930659-31930678 | None:intergenic | 20.0% |
!! | GTATAACTCTACTAAAAATT+TGG | + | chr7.2:31931405-31931424 | None:intergenic | 20.0% |
!! | GTTCAGTATACAAATTATTT+CGG | + | chr7.2:31931528-31931547 | None:intergenic | 20.0% |
!! | TTAGTTAAAATAATGTGTAG+GGG | + | chr7.2:31930657-31930676 | None:intergenic | 20.0% |
!! | TTTAACTGTAAAATCTTTGT+TGG | + | chr7.2:31931780-31931799 | None:intergenic | 20.0% |
!!! | AACAAAGATTTTACAGTTAA+AGG | - | chr7.2:31931779-31931798 | MS.gene42084:intron | 20.0% |
!!! | AATGCTCAAACATATTTTTT+AGG | - | chr7.2:31930340-31930359 | MS.gene42084:CDS | 20.0% |
!!! | AGAAATGACTTCTTTTTTAA+TGG | + | chr7.2:31930101-31930120 | None:intergenic | 20.0% |
!!! | ATCAATGCTTTTAACAATAA+AGG | - | chr7.2:31931668-31931687 | MS.gene42084:intron | 20.0% |
!!! | ATTTTGGCACTAAATAATAA+TGG | - | chr7.2:31930698-31930717 | MS.gene42084:CDS | 20.0% |
!!! | CATACACGTTTTTTTTTTTT+AGG | - | chr7.2:31930977-31930996 | MS.gene42084:intron | 20.0% |
!!! | CGTAATAATTTTTAATTCGT+CGG | - | chr7.2:31931262-31931281 | MS.gene42084:CDS | 20.0% |
! | ATAATGGCTAAAACTAAAAG+TGG | - | chr7.2:31930714-31930733 | MS.gene42084:CDS | 25.0% |
! | GGAAAAAAAAAATTGAATGG+TGG | - | chr7.2:31930462-31930481 | MS.gene42084:intron | 25.0% |
! | GTCAAGTTAGAAAAAATTGT+AGG | - | chr7.2:31932316-31932335 | MS.gene42084:CDS | 25.0% |
! | TAGTCACAAAGTTTAGATTT+AGG | - | chr7.2:31931443-31931462 | MS.gene42084:intron | 25.0% |
! | TATTGTTTAATCCATATGCA+TGG | + | chr7.2:31930531-31930550 | None:intergenic | 25.0% |
!! | AAAATATGAACTTTGGTGAT+TGG | + | chr7.2:31929995-31930014 | None:intergenic | 25.0% |
!! | CAAGTCAAAACTTTTCTTTA+AGG | - | chr7.2:31931211-31931230 | MS.gene42084:CDS | 25.0% |
!!! | AGAATTAACTTGTGATTTTG+TGG | + | chr7.2:31932208-31932227 | None:intergenic | 25.0% |
!!! | ATTTGTATAACTTTTGAGTG+AGG | - | chr7.2:31930429-31930448 | MS.gene42084:intron | 25.0% |
AAGAACTTGCAAAACCAAAA+GGG | - | chr7.2:31932144-31932163 | MS.gene42084:intron | 30.0% | |
ATATATACTTACAGCAACCA+CGG | + | chr7.2:31931183-31931202 | None:intergenic | 30.0% | |
CATAAAGAGAAAGAAGAGAA+AGG | + | chr7.2:31930206-31930225 | None:intergenic | 30.0% | |
GAGTACGAAAATATGAACTT+TGG | + | chr7.2:31930002-31930021 | None:intergenic | 30.0% | |
TTGCTTGAACAAAACAATCA+TGG | + | chr7.2:31930174-31930193 | None:intergenic | 30.0% | |
TTTATCCAGTGGTATAAAAC+TGG | + | chr7.2:31931900-31931919 | None:intergenic | 30.0% | |
TTTCTAATTAGTGTGTGCAT+GGG | + | chr7.2:31930404-31930423 | None:intergenic | 30.0% | |
! | TTTTACTATTATTAGCGCTC+AGG | - | chr7.2:31931855-31931874 | MS.gene42084:intron | 30.0% |
!! | AAATCAACTCTGAAGCTTAA+CGG | + | chr7.2:31932243-31932262 | None:intergenic | 30.0% |
!! | CGTTCTGAAGTAAAAATTAG+AGG | + | chr7.2:31930059-31930078 | None:intergenic | 30.0% |
AAAAGAAGTCATTTCTGCTG+TGG | - | chr7.2:31930105-31930124 | MS.gene42084:CDS | 35.0% | |
AAAGAAGTCATTTCTGCTGT+GGG | - | chr7.2:31930106-31930125 | MS.gene42084:CDS | 35.0% | |
AATGAGACATGTTTATCCAG+TGG | + | chr7.2:31931911-31931930 | None:intergenic | 35.0% | |
ACTTGGTTGGAATGTTCAAT+TGG | - | chr7.2:31931565-31931584 | MS.gene42084:intron | 35.0% | |
AGAAAGAAGAGAAAGGTGAA+AGG | + | chr7.2:31930199-31930218 | None:intergenic | 35.0% | |
ATACTGAACACATTTCAGCT+TGG | - | chr7.2:31931539-31931558 | MS.gene42084:intron | 35.0% | |
ATTATAGGATCGCACACAAT+TGG | - | chr7.2:31931958-31931977 | MS.gene42084:intron | 35.0% | |
ATTTAAATCACCACCTGTTC+TGG | + | chr7.2:31932073-31932092 | None:intergenic | 35.0% | |
CAAGAACTTGCAAAACCAAA+AGG | - | chr7.2:31932143-31932162 | MS.gene42084:intron | 35.0% | |
CACAAGTTAATTCTTACGCT+AGG | - | chr7.2:31932214-31932233 | MS.gene42084:CDS | 35.0% | |
CTTGGTTGGAATGTTCAATT+GGG | - | chr7.2:31931566-31931585 | MS.gene42084:intron | 35.0% | |
GAATGTTCAATTGGGAAGAA+GGG | - | chr7.2:31931574-31931593 | MS.gene42084:intron | 35.0% | |
GATAAAGCAACCATTTCTCT+GGG | + | chr7.2:31931701-31931720 | None:intergenic | 35.0% | |
GTGGTATAAAACTGGATAGA+CGG | + | chr7.2:31931892-31931911 | None:intergenic | 35.0% | |
GTTGTAGATTCTTCAGAACA+AGG | - | chr7.2:31931989-31932008 | MS.gene42084:intron | 35.0% | |
GTTTAATCCATATGCATGGA+CGG | + | chr7.2:31930527-31930546 | None:intergenic | 35.0% | |
GTTTCTAATTAGTGTGTGCA+TGG | + | chr7.2:31930405-31930424 | None:intergenic | 35.0% | |
TAAGGTCCACTTAAATCAAG+AGG | + | chr7.2:31931745-31931764 | None:intergenic | 35.0% | |
TGATAAAGCAACCATTTCTC+TGG | + | chr7.2:31931702-31931721 | None:intergenic | 35.0% | |
TGCCAATGCAATGTTCAAAA+TGG | - | chr7.2:31932263-31932282 | MS.gene42084:CDS | 35.0% | |
TGTTGGAGAAAGCAGTAATA+AGG | + | chr7.2:31931763-31931782 | None:intergenic | 35.0% | |
TTGTGATGCATCAGTACTAT+TGG | - | chr7.2:31931001-31931020 | MS.gene42084:intron | 35.0% | |
TTTAAATCACCACCTGTTCT+GGG | + | chr7.2:31932072-31932091 | None:intergenic | 35.0% | |
! | AGAGAAATGGTTGCTTTATC+AGG | - | chr7.2:31931701-31931720 | MS.gene42084:intron | 35.0% |
! | TAAGCATTGTCAAATGTCTC+TGG | + | chr7.2:31932120-31932139 | None:intergenic | 35.0% |
! | TATGAACTTTGGTGATTGGA+AGG | + | chr7.2:31929991-31930010 | None:intergenic | 35.0% |
! | TTAATGGTTGAAAGCACAAG+TGG | + | chr7.2:31930085-31930104 | None:intergenic | 35.0% |
! | TTCGTACTCTTTTGCCTTAT+TGG | - | chr7.2:31930013-31930032 | MS.gene42084:CDS | 35.0% |
!! | AATCAACTCTGAAGCTTAAC+GGG | + | chr7.2:31932242-31932261 | None:intergenic | 35.0% |
!! | TCTATCCAGTTTTATACCAC+TGG | - | chr7.2:31931892-31931911 | MS.gene42084:intron | 35.0% |
!! | TGTTCTGAAGAATCTACAAC+TGG | + | chr7.2:31931989-31932008 | None:intergenic | 35.0% |
ATGTTCAAAATGGCGAACCT+TGG | - | chr7.2:31932273-31932292 | MS.gene42084:CDS | 40.0% | |
CAGCACAAGAGACAGTATTA+GGG | + | chr7.2:31931133-31931152 | None:intergenic | 40.0% | |
CTACCTCCTCTTGATTTAAG+TGG | - | chr7.2:31931736-31931755 | MS.gene42084:intron | 40.0% | |
GACGATACATCAAGTTTCAC+AGG | - | chr7.2:31931023-31931042 | MS.gene42084:intron | 40.0% | |
GAGCTGAAATTGTGCCAATA+AGG | + | chr7.2:31930030-31930049 | None:intergenic | 40.0% | |
GGAATGTTCAATTGGGAAGA+AGG | - | chr7.2:31931573-31931592 | MS.gene42084:intron | 40.0% | |
TCAGCACAAGAGACAGTATT+AGG | + | chr7.2:31931134-31931153 | None:intergenic | 40.0% | |
TCAGCTAACTCAGATTTACC+TGG | - | chr7.2:31931620-31931639 | MS.gene42084:intron | 40.0% | |
TTCACAGGTGAAAAAACAGC+TGG | - | chr7.2:31931038-31931057 | MS.gene42084:intron | 40.0% | |
! | ATTGTCAAATGTCTCTGGAG+TGG | + | chr7.2:31932115-31932134 | None:intergenic | 40.0% |
! | TTTTACACCGTCCATGCATA+TGG | - | chr7.2:31930517-31930536 | MS.gene42084:intron | 40.0% |
!! | CGCCATTTTGAACATTGCAT+TGG | + | chr7.2:31932268-31932287 | None:intergenic | 40.0% |
AACTCAGATTTACCTGGTCC+TGG | - | chr7.2:31931626-31931645 | MS.gene42084:intron | 45.0% | |
AGACCACTTAGATCAGAACC+AGG | + | chr7.2:31931647-31931666 | None:intergenic | 45.0% | |
AGGTTTCACACCCAGAGAAA+TGG | - | chr7.2:31931688-31931707 | MS.gene42084:intron | 45.0% | |
CATTTCTGCTGTGGGTAATG+AGG | - | chr7.2:31930114-31930133 | MS.gene42084:CDS | 45.0% | |
CCAAACGCAAATTCACTGAG+AGG | - | chr7.2:31931062-31931081 | MS.gene42084:intron | 45.0% | |
CCTCTCAGTGAATTTGCGTT+TGG | + | chr7.2:31931065-31931084 | None:intergenic | 45.0% | |
CTGAACACATTTCAGCTTGG+TGG | - | chr7.2:31931542-31931561 | MS.gene42084:intron | 45.0% | |
GATTCAACCACAGCAAGCTT+TGG | - | chr7.2:31931596-31931615 | MS.gene42084:intron | 45.0% | |
GGTCCACTTAAATCAAGAGG+AGG | + | chr7.2:31931742-31931761 | None:intergenic | 45.0% | |
TTTGAGTGAGGTGCGATGAA+AGG | - | chr7.2:31930441-31930460 | MS.gene42084:intron | 45.0% | |
! | CAATCAAGTTGTCCCAGAAC+AGG | - | chr7.2:31932057-31932076 | MS.gene42084:intron | 45.0% |
! | CAGAGTGAAAGAGACCCTTT+TGG | + | chr7.2:31932161-31932180 | None:intergenic | 45.0% |
!! | ACATTTCAGCTTGGTGGACT+TGG | - | chr7.2:31931548-31931567 | MS.gene42084:intron | 45.0% |
!!! | CAAATATATATTTTTTTTTT+TGG | + | chr7.2:31930746-31930765 | None:intergenic | 5.0% |
CTTAGATCAGAACCAGGACC+AGG | + | chr7.2:31931641-31931660 | None:intergenic | 50.0% | |
TGTAGCAGCAAGAGATTCCG+TGG | - | chr7.2:31931163-31931182 | MS.gene42084:CDS | 50.0% | |
TTATTAGCGCTCAGGCACTC+TGG | - | chr7.2:31931863-31931882 | MS.gene42084:intron | 50.0% | |
! | TCAAGTTGTCCCAGAACAGG+TGG | - | chr7.2:31932060-31932079 | MS.gene42084:intron | 50.0% |
! | TCTGGAGTGGTGGTATCAAG+TGG | + | chr7.2:31932102-31932121 | None:intergenic | 50.0% |
!! | AGCTGAACCAAAGCTTGCTG+TGG | + | chr7.2:31931606-31931625 | None:intergenic | 50.0% |
!! | GGTCCTGGTTCTGATCTAAG+TGG | - | chr7.2:31931641-31931660 | MS.gene42084:intron | 50.0% |
!! | GTCAAATGTCTCTGGAGTGG+TGG | + | chr7.2:31932112-31932131 | None:intergenic | 50.0% |
!! | TTCAGCTTGGTGGACTTGGT+TGG | - | chr7.2:31931552-31931571 | MS.gene42084:intron | 50.0% |
GTGGGTAATGAGGCTCGCAT+GGG | - | chr7.2:31930124-31930143 | MS.gene42084:CDS | 55.0% | |
TGGGTAATGAGGCTCGCATG+GGG | - | chr7.2:31930125-31930144 | MS.gene42084:CDS | 55.0% | |
TGTGGGTAATGAGGCTCGCA+TGG | - | chr7.2:31930123-31930142 | MS.gene42084:CDS | 55.0% | |
TTGACCACTAGACCCCGTGA+GGG | + | chr7.2:31932301-31932320 | None:intergenic | 55.0% | |
CTTGACCACTAGACCCCGTG+AGG | + | chr7.2:31932302-31932321 | None:intergenic | 60.0% | |
GGGTAATGAGGCTCGCATGG+GGG | - | chr7.2:31930126-31930145 | MS.gene42084:CDS | 60.0% | |
TGACCACTAGACCCCGTGAG+GGG | + | chr7.2:31932300-31932319 | None:intergenic | 60.0% | |
GACCACTAGACCCCGTGAGG+GGG | + | chr7.2:31932299-31932318 | None:intergenic | 65.0% | |
CGAACCTTGGCCCCCTCACG+GGG | - | chr7.2:31932286-31932305 | MS.gene42084:CDS | 70.0% | |
GCGAACCTTGGCCCCCTCAC+GGG | - | chr7.2:31932285-31932304 | MS.gene42084:CDS | 70.0% | |
GGCGAACCTTGGCCCCCTCA+CGG | - | chr7.2:31932284-31932303 | MS.gene42084:CDS | 70.0% | |
TAGACCCCGTGAGGGGGCCA+AGG | + | chr7.2:31932293-31932312 | None:intergenic | 70.0% | |
GGCCCCCTCACGGGGTCTAG+TGG | - | chr7.2:31932294-31932313 | MS.gene42084:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 31929983 | 31932350 | 31929983 | ID=MS.gene42084 |
chr7.2 | mRNA | 31929983 | 31932350 | 31929983 | ID=MS.gene42084.t1;Parent=MS.gene42084 |
chr7.2 | exon | 31932206 | 31932350 | 31932206 | ID=MS.gene42084.t1.exon1;Parent=MS.gene42084.t1 |
chr7.2 | CDS | 31932206 | 31932350 | 31932206 | ID=cds.MS.gene42084.t1;Parent=MS.gene42084.t1 |
chr7.2 | exon | 31931143 | 31931288 | 31931143 | ID=MS.gene42084.t1.exon2;Parent=MS.gene42084.t1 |
chr7.2 | CDS | 31931143 | 31931288 | 31931143 | ID=cds.MS.gene42084.t1;Parent=MS.gene42084.t1 |
chr7.2 | exon | 31930611 | 31930776 | 31930611 | ID=MS.gene42084.t1.exon3;Parent=MS.gene42084.t1 |
chr7.2 | CDS | 31930611 | 31930776 | 31930611 | ID=cds.MS.gene42084.t1;Parent=MS.gene42084.t1 |
chr7.2 | exon | 31929983 | 31930368 | 31929983 | ID=MS.gene42084.t1.exon4;Parent=MS.gene42084.t1 |
chr7.2 | CDS | 31929983 | 31930368 | 31929983 | ID=cds.MS.gene42084.t1;Parent=MS.gene42084.t1 |
Gene Sequence |
Protein sequence |