Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058177.t1 | XP_003594832.1 | 96.2 | 157 | 6 | 0 | 1 | 157 | 1 | 157 | 5.60E-79 | 303.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058177.t1 | P93333 | 87.3 | 157 | 20 | 0 | 1 | 157 | 1 | 157 | 5.2e-73 | 275.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058177.t1 | G7IMY8 | 96.2 | 157 | 6 | 0 | 1 | 157 | 1 | 157 | 4.1e-79 | 303.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050380 | MS.gene058177 | 0.802297 | 6.00E-49 | -1.69E-46 |
| MS.gene051996 | MS.gene058177 | 0.803314 | 3.70E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene058177 | 0.806502 | 7.97E-50 | -1.69E-46 |
| MS.gene054290 | MS.gene058177 | 0.809394 | 1.93E-50 | -1.69E-46 |
| MS.gene054742 | MS.gene058177 | 0.832399 | 9.67E-56 | -1.69E-46 |
| MS.gene056920 | MS.gene058177 | 0.801959 | 7.04E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene058177 | 0.800405 | 1.46E-48 | -1.69E-46 |
| MS.gene058177 | MS.gene058179 | 0.802959 | 4.38E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene058180 | 0.829552 | 4.83E-55 | -1.69E-46 |
| MS.gene058177 | MS.gene060087 | 0.837422 | 5.25E-57 | -1.69E-46 |
| MS.gene058177 | MS.gene063988 | 0.816973 | 4.20E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene06593 | 0.80831 | 3.30E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene066937 | 0.814877 | 1.23E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene06756 | 0.809764 | 1.61E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene06805 | 0.802721 | 4.90E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene068296 | 0.817074 | 3.98E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene069431 | 0.804461 | 2.14E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene069480 | 0.813552 | 2.42E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene071838 | 0.812423 | 4.27E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene071841 | 0.849979 | 2.28E-60 | -1.69E-46 |
| MS.gene058177 | MS.gene073526 | 0.801275 | 9.73E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene22567 | 0.801334 | 9.45E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene23026 | 0.810672 | 1.03E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene23503 | 0.81442 | 1.55E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene23552 | 0.832577 | 8.73E-56 | -1.69E-46 |
| MS.gene058177 | MS.gene25652 | 0.816299 | 5.94E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene26289 | 0.811028 | 8.59E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene26517 | 0.803473 | 3.43E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene28548 | 0.820711 | 5.94E-53 | -1.69E-46 |
| MS.gene058177 | MS.gene29826 | 0.801406 | 9.14E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene30666 | 0.817471 | 3.24E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene35208 | 0.808641 | 2.80E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene35597 | 0.800161 | 1.64E-48 | -1.69E-46 |
| MS.gene058177 | MS.gene37747 | 0.810694 | 1.01E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene38435 | 0.802836 | 4.64E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene38687 | 0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene40846 | 0.801496 | 8.76E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene41015 | 0.804659 | 1.94E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene42005 | 0.801177 | 1.02E-48 | -1.69E-46 |
| MS.gene058177 | MS.gene42080 | 0.827097 | 1.89E-54 | -1.69E-46 |
| MS.gene058177 | MS.gene42084 | 0.801321 | 9.52E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene42096 | 0.802692 | 4.97E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene43874 | 0.829234 | 5.77E-55 | -1.69E-46 |
| MS.gene058177 | MS.gene44958 | 0.811604 | 6.44E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene45230 | 0.813637 | 2.31E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene46434 | 0.809903 | 1.50E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene47719 | 0.809156 | 2.18E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene48023 | 0.800367 | 1.49E-48 | -1.69E-46 |
| MS.gene058177 | MS.gene48169 | 0.82083 | 5.57E-53 | -1.69E-46 |
| MS.gene058177 | MS.gene48184 | 0.807588 | 4.70E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene48806 | 0.808222 | 3.44E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene48807 | 0.800818 | 1.21E-48 | -1.69E-46 |
| MS.gene058177 | MS.gene48885 | 0.804584 | 2.01E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene50787 | 0.800029 | 1.75E-48 | -1.69E-46 |
| MS.gene058177 | MS.gene50789 | 0.811515 | 6.73E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene51735 | 0.809396 | 1.93E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene54029 | 0.848604 | 5.51E-60 | -1.69E-46 |
| MS.gene058177 | MS.gene57807 | 0.804703 | 1.90E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene58786 | 0.824879 | 6.35E-54 | -1.69E-46 |
| MS.gene058177 | MS.gene59005 | 0.800392 | 1.47E-48 | -1.69E-46 |
| MS.gene058177 | MS.gene59006 | 0.812195 | 4.79E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene59920 | 0.818198 | 2.22E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene61143 | 0.803938 | 2.74E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene61194 | 0.810043 | 1.40E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene62114 | 0.802954 | 4.39E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene63913 | 0.807696 | 4.46E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene63914 | 0.806672 | 7.34E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene64584 | 0.816764 | 4.67E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene65144 | 0.81073 | 9.97E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene65724 | 0.815314 | 9.85E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene67405 | 0.802941 | 4.42E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene70062 | 0.830805 | 2.39E-55 | -1.69E-46 |
| MS.gene058177 | MS.gene70064 | 0.818556 | 1.84E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene70474 | 0.800906 | 1.16E-48 | -1.69E-46 |
| MS.gene058177 | MS.gene71342 | 0.812408 | 4.30E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene71346 | 0.831215 | 1.89E-55 | -1.69E-46 |
| MS.gene058177 | MS.gene74565 | 0.80821 | 3.46E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene75396 | 0.814505 | 1.49E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene76737 | 0.800478 | 1.41E-48 | -1.69E-46 |
| MS.gene058177 | MS.gene76738 | 0.806644 | 7.44E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene77033 | 0.806347 | 8.60E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene77829 | 0.809959 | 1.46E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene79220 | 0.804016 | 2.64E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene80293 | 0.813707 | 2.23E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene80744 | 0.830482 | 2.87E-55 | -1.69E-46 |
| MS.gene058177 | MS.gene81349 | 0.820463 | 6.77E-53 | -1.69E-46 |
| MS.gene058177 | MS.gene82245 | 0.835232 | 1.89E-56 | -1.69E-46 |
| MS.gene058177 | MS.gene84568 | 0.818152 | 2.28E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene85750 | 0.820837 | 5.55E-53 | -1.69E-46 |
| MS.gene058177 | MS.gene87056 | 0.814767 | 1.30E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene87222 | 0.803752 | 3.00E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene87346 | 0.806604 | 7.59E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene87750 | 0.833371 | 5.54E-56 | -1.69E-46 |
| MS.gene058177 | MS.gene91221 | 0.815366 | 9.59E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene91222 | 0.801708 | 7.93E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene92886 | 0.805502 | 1.29E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene93200 | 0.806624 | 7.51E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene93632 | 0.800125 | 1.67E-48 | -1.69E-46 |
| MS.gene058177 | MS.gene95804 | 0.817689 | 2.89E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene97019 | 0.810421 | 1.16E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene97024 | 0.810222 | 1.28E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene97335 | 0.807205 | 5.66E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene97499 | 0.807283 | 5.45E-50 | -1.69E-46 |
| MS.gene058177 | MS.gene97500 | 0.81263 | 3.85E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene97823 | 0.824427 | 8.12E-54 | -1.69E-46 |
| MS.gene058177 | MS.gene98470 | 0.800454 | 1.43E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058177.t1 | MTR_2g035130 | 96.178 | 157 | 6 | 0 | 1 | 157 | 1 | 157 | 3.47e-106 | 300 |
| MS.gene058177.t1 | MTR_2g035150 | 85.443 | 158 | 23 | 0 | 1 | 158 | 1 | 158 | 6.03e-96 | 274 |
| MS.gene058177.t1 | MTR_2g035100 | 87.261 | 157 | 20 | 0 | 1 | 157 | 1 | 157 | 4.20e-95 | 272 |
| MS.gene058177.t1 | MTR_2g035120 | 85.443 | 158 | 23 | 0 | 1 | 158 | 1 | 158 | 6.04e-94 | 269 |
| MS.gene058177.t1 | MTR_2g035105 | 85.987 | 157 | 22 | 0 | 1 | 157 | 1 | 157 | 1.01e-93 | 268 |
| MS.gene058177.t1 | MTR_6g033450 | 68.354 | 158 | 50 | 0 | 1 | 158 | 1 | 158 | 9.74e-77 | 225 |
| MS.gene058177.t1 | MTR_4g120970 | 68.354 | 158 | 50 | 0 | 1 | 158 | 1 | 158 | 9.74e-77 | 225 |
| MS.gene058177.t1 | MTR_2g035320 | 60.510 | 157 | 62 | 0 | 1 | 157 | 1 | 157 | 1.22e-63 | 192 |
| MS.gene058177.t1 | MTR_2g035190 | 58.599 | 157 | 65 | 0 | 1 | 157 | 1 | 157 | 1.67e-61 | 187 |
| MS.gene058177.t1 | MTR_2g035210 | 57.325 | 157 | 67 | 0 | 1 | 157 | 1 | 157 | 1.78e-59 | 182 |
| MS.gene058177.t1 | MTR_2g035220 | 57.325 | 157 | 67 | 0 | 1 | 157 | 1 | 157 | 2.65e-58 | 179 |
| MS.gene058177.t1 | MTR_2g035170 | 56.051 | 157 | 69 | 0 | 1 | 157 | 1 | 157 | 6.72e-58 | 177 |
| MS.gene058177.t1 | MTR_2g435310 | 38.462 | 156 | 95 | 1 | 1 | 155 | 1 | 156 | 2.68e-37 | 125 |
| MS.gene058177.t1 | MTR_4g120760 | 38.854 | 157 | 95 | 1 | 1 | 156 | 1 | 157 | 4.24e-36 | 122 |
| MS.gene058177.t1 | MTR_4g120760 | 38.854 | 157 | 95 | 1 | 1 | 156 | 1 | 157 | 4.58e-36 | 122 |
| MS.gene058177.t1 | MTR_2g035320 | 57.576 | 99 | 42 | 0 | 59 | 157 | 24 | 122 | 4.72e-35 | 119 |
| MS.gene058177.t1 | MTR_4g120950 | 44.444 | 162 | 83 | 5 | 1 | 158 | 1 | 159 | 1.99e-32 | 113 |
| MS.gene058177.t1 | MTR_4g120940 | 61.798 | 89 | 31 | 1 | 70 | 158 | 35 | 120 | 1.26e-31 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 36 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAGCATAGTTGGTGGTTT+TGG | 0.149266 | 2.1:-57694842 | MS.gene058177:CDS |
| TGATGGCATCAATAACCTTT+GGG | 0.301288 | 2.1:+57695745 | None:intergenic |
| AACGATATCAATACTCTTGA+TGG | 0.325047 | 2.1:+57695728 | None:intergenic |
| TTTGCAATGGTTCCTCCATT+TGG | 0.327211 | 2.1:+57694767 | None:intergenic |
| TATATGCTTTAGTTGTAATC+AGG | 0.341112 | 2.1:+57694626 | None:intergenic |
| GAAATCTTCTCCACTGTGTC+TGG | 0.343745 | 2.1:+57694815 | None:intergenic |
| TTGATGGCATCAATAACCTT+TGG | 0.345179 | 2.1:+57695744 | None:intergenic |
| GGCTCTTGAAGGTTATGTTT+TGG | 0.350667 | 2.1:-57694654 | MS.gene058177:CDS |
| CACTTTGTGCAACACATACT+TGG | 0.384404 | 2.1:+57694898 | None:intergenic |
| CTTAGTAGATGATGTTAACT+TGG | 0.391360 | 2.1:-57694873 | MS.gene058177:CDS |
| CATCAATAACCTTTGGGGTA+AGG | 0.433870 | 2.1:+57695751 | None:intergenic |
| ACTAGGTGCAAAATCACCTT+TGG | 0.438881 | 2.1:+57694724 | None:intergenic |
| AAGAGTATTGATATCGTTGA+AGG | 0.465901 | 2.1:-57695723 | MS.gene058177:CDS |
| GCTTACCACTACAGCATAGT+TGG | 0.468258 | 2.1:-57694851 | MS.gene058177:CDS |
| AGTGGAGAAGATTTCATTTG+AGG | 0.476098 | 2.1:-57694807 | MS.gene058177:CDS |
| AAATTGTCTGCAGGACCAAA+TGG | 0.477800 | 2.1:-57694782 | MS.gene058177:CDS |
| AGAGCTTTGTAAAGTGTAGC+AGG | 0.480318 | 2.1:+57695792 | None:intergenic |
| TTTGAGGCTAAATTGTCTGC+AGG | 0.494016 | 2.1:-57694791 | MS.gene058177:CDS |
| AATGGCAAAGCTAGGGGTGA+TGG | 0.523022 | 2.1:-57694686 | MS.gene058177:CDS |
| TTCTTGAGTTCCTCTTCACT+AGG | 0.524188 | 2.1:+57694707 | None:intergenic |
| CAAGTATGTGTTGCACAAAG+TGG | 0.538293 | 2.1:-57694897 | MS.gene058177:CDS |
| AACTCAAGAATGGCAAAGCT+AGG | 0.540466 | 2.1:-57694694 | MS.gene058177:CDS |
| ACTCAAGAATGGCAAAGCTA+GGG | 0.556431 | 2.1:-57694693 | MS.gene058177:CDS |
| ATTGATATCGTTGAAGGAGA+CGG | 0.559020 | 2.1:-57695717 | MS.gene058177:CDS |
| TGTAGCAGGAGCTACAATAG+AGG | 0.565152 | 2.1:+57695806 | None:intergenic |
| TACCACTACAGCATAGTTGG+TGG | 0.567411 | 2.1:-57694848 | MS.gene058177:CDS |
| TTTCACACTAAGCTTTGCAA+TGG | 0.568267 | 2.1:+57694754 | None:intergenic |
| GATGGCATCAATAACCTTTG+GGG | 0.578696 | 2.1:+57695746 | None:intergenic |
| AGTGAAGAGGAACTCAAGAA+TGG | 0.584353 | 2.1:-57694704 | MS.gene058177:CDS |
| GTTGAAGGAGACGGTTGCGC+CGG | 0.587773 | 2.1:-57695708 | MS.gene058177:CDS |
| AACCACCAACTATGCTGTAG+TGG | 0.607193 | 2.1:+57694846 | None:intergenic |
| TGCTGACAACCTTACCCCAA+AGG | 0.621335 | 2.1:-57695760 | MS.gene058177:CDS |
| CTCAAGAATGGCAAAGCTAG+GGG | 0.641253 | 2.1:-57694692 | MS.gene058177:CDS |
| AGTGTGAAATACTTCACCAA+AGG | 0.651010 | 2.1:-57694740 | MS.gene058177:CDS |
| AGCAGGAGCTACAATAGAGG+TGG | 0.665165 | 2.1:+57695809 | None:intergenic |
| TTGTCTGCAGGACCAAATGG+AGG | 0.666387 | 2.1:-57694779 | MS.gene058177:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATATATAAAATAAT+AGG | - | chr2.1:57695515-57695534 | MS.gene058177:intron | 0.0% |
| !! | ATCATTACTAGTATTATATA+AGG | - | chr2.1:57695475-57695494 | MS.gene058177:intron | 15.0% |
| !! | GTGATAAAAAAATTGATAAA+CGG | + | chr2.1:57695044-57695063 | None:intergenic | 15.0% |
| !! | ACTCTTATGATTAACATATT+TGG | - | chr2.1:57694953-57694972 | MS.gene058177:intron | 20.0% |
| !! | ATATTTGGTTGCTAATTAAT+TGG | - | chr2.1:57694968-57694987 | MS.gene058177:intron | 20.0% |
| ! | AAAATTGATAAACGGTAAAG+TGG | + | chr2.1:57695036-57695055 | None:intergenic | 25.0% |
| ! | AACTTACTTTAATACAACCT+TGG | + | chr2.1:57695164-57695183 | None:intergenic | 25.0% |
| ! | CTTTCAAATATACCGTTAAA+AGG | + | chr2.1:57695274-57695293 | None:intergenic | 25.0% |
| ! | TTAGTCAAAGACAAATTGTT+CGG | + | chr2.1:57695392-57695411 | None:intergenic | 25.0% |
| !! | AGAATGCTAGAATATTCTTT+TGG | - | chr2.1:57695292-57695311 | MS.gene058177:intron | 25.0% |
| !!! | TGATTTGGTATACTTGAAAA+AGG | - | chr2.1:57695112-57695131 | MS.gene058177:intron | 25.0% |
| AACACAATTGCTTGATTAAC+TGG | - | chr2.1:57695429-57695448 | MS.gene058177:intron | 30.0% | |
| AACGATATCAATACTCTTGA+TGG | + | chr2.1:57694746-57694765 | None:intergenic | 30.0% | |
| CAAAATGGACAATTTAACCA+AGG | - | chr2.1:57695144-57695163 | MS.gene058177:intron | 30.0% | |
| CTTAGTAGATGATGTTAACT+TGG | - | chr2.1:57695598-57695617 | MS.gene058177:intron | 30.0% | |
| CTTAGTGATCTCATTCTTTA+TGG | - | chr2.1:57695238-57695257 | MS.gene058177:intron | 30.0% | |
| GATCTCATTCTTTATGGAAT+AGG | - | chr2.1:57695244-57695263 | MS.gene058177:intron | 30.0% | |
| TAAAGAATGAGATCACTAAG+CGG | + | chr2.1:57695238-57695257 | None:intergenic | 30.0% | |
| TAGTCAAAGACAAATTGTTC+GGG | + | chr2.1:57695391-57695410 | None:intergenic | 30.0% | |
| TCAAGTATACCAAATCAATG+TGG | + | chr2.1:57695109-57695128 | None:intergenic | 30.0% | |
| ! | ATCAAAGTGTCACAATTACT+AGG | + | chr2.1:57695070-57695089 | None:intergenic | 30.0% |
| ! | GAAGAATAACCACATTGATT+TGG | - | chr2.1:57695097-57695116 | MS.gene058177:intron | 30.0% |
| ! | GACAAAAGTGATTTTCTTGA+TGG | + | chr2.1:57694791-57694810 | None:intergenic | 30.0% |
| ! | TAAATTGTCCATTTTGTGCT+AGG | + | chr2.1:57695140-57695159 | None:intergenic | 30.0% |
| !! | AAGAAAATCACTTTTGTCGA+AGG | - | chr2.1:57694793-57694812 | MS.gene058177:CDS | 30.0% |
| !! | AAGAGTATTGATATCGTTGA+AGG | - | chr2.1:57694748-57694767 | MS.gene058177:CDS | 30.0% |
| AAAAGGTTCCTAGCACAAAA+TGG | - | chr2.1:57695129-57695148 | MS.gene058177:intron | 35.0% | |
| AGTGGAGAAGATTTCATTTG+AGG | - | chr2.1:57695664-57695683 | MS.gene058177:intron | 35.0% | |
| AGTGTGAAATACTTCACCAA+AGG | - | chr2.1:57695731-57695750 | MS.gene058177:CDS | 35.0% | |
| ATCTAACTGCGAAATTCACA+CGG | - | chr2.1:57694859-57694878 | MS.gene058177:CDS | 35.0% | |
| ATTGATATCGTTGAAGGAGA+CGG | - | chr2.1:57694754-57694773 | MS.gene058177:CDS | 35.0% | |
| TGATGGCATCAATAACCTTT+GGG | + | chr2.1:57694729-57694748 | None:intergenic | 35.0% | |
| TTCTAATCTGAGTATCAGTC+AGG | - | chr2.1:57695328-57695347 | MS.gene058177:intron | 35.0% | |
| TTTAACCAATGATGTGCAGA+TGG | - | chr2.1:57695545-57695564 | MS.gene058177:intron | 35.0% | |
| TTTCACACTAAGCTTTGCAA+TGG | + | chr2.1:57695720-57695739 | None:intergenic | 35.0% | |
| ! | GGAATAGGTCATCCTTTTAA+CGG | - | chr2.1:57695259-57695278 | MS.gene058177:intron | 35.0% |
| ! | TCTGCACATCATTGGTTAAA+AGG | + | chr2.1:57695545-57695564 | None:intergenic | 35.0% |
| ! | TTGATGGCATCAATAACCTT+TGG | + | chr2.1:57694730-57694749 | None:intergenic | 35.0% |
| !! | AGTGATTTTCTTGATGGTTC+CGG | + | chr2.1:57694785-57694804 | None:intergenic | 35.0% |
| AAATTGTCTGCAGGACCAAA+TGG | - | chr2.1:57695689-57695708 | MS.gene058177:CDS | 40.0% | |
| AACTCAAGAATGGCAAAGCT+AGG | - | chr2.1:57695777-57695796 | MS.gene058177:CDS | 40.0% | |
| ACTAGGTGCAAAATCACCTT+TGG | + | chr2.1:57695750-57695769 | None:intergenic | 40.0% | |
| ACTCAAGAATGGCAAAGCTA+GGG | - | chr2.1:57695778-57695797 | MS.gene058177:CDS | 40.0% | |
| AGTGAAGAGGAACTCAAGAA+TGG | - | chr2.1:57695767-57695786 | MS.gene058177:CDS | 40.0% | |
| CAAGTATGTGTTGCACAAAG+TGG | - | chr2.1:57695574-57695593 | MS.gene058177:intron | 40.0% | |
| CACTTTGTGCAACACATACT+TGG | + | chr2.1:57695576-57695595 | None:intergenic | 40.0% | |
| GATGGCATCAATAACCTTTG+GGG | + | chr2.1:57694728-57694747 | None:intergenic | 40.0% | |
| TTCTTGAGTTCCTCTTCACT+AGG | + | chr2.1:57695767-57695786 | None:intergenic | 40.0% | |
| TTTCACCATCTGCACATCAT+TGG | + | chr2.1:57695553-57695572 | None:intergenic | 40.0% | |
| TTTGCAATGGTTCCTCCATT+TGG | + | chr2.1:57695707-57695726 | None:intergenic | 40.0% | |
| ! | AGAGCTTTGTAAAGTGTAGC+AGG | + | chr2.1:57694682-57694701 | None:intergenic | 40.0% |
| ! | GGCTCTTGAAGGTTATGTTT+TGG | - | chr2.1:57695817-57695836 | MS.gene058177:CDS | 40.0% |
| ! | TGATTTTGCACCTAGTGAAG+AGG | - | chr2.1:57695754-57695773 | MS.gene058177:CDS | 40.0% |
| ! | TTTGAGGCTAAATTGTCTGC+AGG | - | chr2.1:57695680-57695699 | MS.gene058177:CDS | 40.0% |
| !! | CATCAATAACCTTTGGGGTA+AGG | + | chr2.1:57694723-57694742 | None:intergenic | 40.0% |
| !!! | ACAGCATAGTTGGTGGTTTT+GGG | - | chr2.1:57695630-57695649 | MS.gene058177:intron | 40.0% |
| !!! | TACAGCATAGTTGGTGGTTT+TGG | - | chr2.1:57695629-57695648 | MS.gene058177:intron | 40.0% |
| AACCACCAACTATGCTGTAG+TGG | + | chr2.1:57695628-57695647 | None:intergenic | 45.0% | |
| CTCAAGAATGGCAAAGCTAG+GGG | - | chr2.1:57695779-57695798 | MS.gene058177:CDS | 45.0% | |
| GAAATCTTCTCCACTGTGTC+TGG | + | chr2.1:57695659-57695678 | None:intergenic | 45.0% | |
| GCTTACCACTACAGCATAGT+TGG | - | chr2.1:57695620-57695639 | MS.gene058177:intron | 45.0% | |
| TACCACTACAGCATAGTTGG+TGG | - | chr2.1:57695623-57695642 | MS.gene058177:intron | 45.0% | |
| TGTAGCAGGAGCTACAATAG+AGG | + | chr2.1:57694668-57694687 | None:intergenic | 45.0% | |
| !! | GGTCTTTTCAAGGCTCTTGA+AGG | - | chr2.1:57695806-57695825 | MS.gene058177:CDS | 45.0% |
| !! | TAGGGGTGATGGTCTTTTCA+AGG | - | chr2.1:57695796-57695815 | MS.gene058177:CDS | 45.0% |
| AATGGCAAAGCTAGGGGTGA+TGG | - | chr2.1:57695785-57695804 | MS.gene058177:CDS | 50.0% | |
| AGCAGGAGCTACAATAGAGG+TGG | + | chr2.1:57694665-57694684 | None:intergenic | 50.0% | |
| TGCTGACAACCTTACCCCAA+AGG | - | chr2.1:57694711-57694730 | MS.gene058177:CDS | 50.0% | |
| TTGTCTGCAGGACCAAATGG+AGG | - | chr2.1:57695692-57695711 | MS.gene058177:CDS | 50.0% | |
| ! | TTTTGGGCTTCCAGACACAG+TGG | - | chr2.1:57695646-57695665 | MS.gene058177:intron | 50.0% |
| GTTGAAGGAGACGGTTGCGC+CGG | - | chr2.1:57694763-57694782 | MS.gene058177:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 57694634 | 57695859 | 57694634 | ID=MS.gene058177 |
| chr2.1 | mRNA | 57694634 | 57695859 | 57694634 | ID=MS.gene058177.t1;Parent=MS.gene058177 |
| chr2.1 | exon | 57695679 | 57695859 | 57695679 | ID=MS.gene058177.t1.exon1;Parent=MS.gene058177.t1 |
| chr2.1 | CDS | 57695679 | 57695859 | 57695679 | ID=cds.MS.gene058177.t1;Parent=MS.gene058177.t1 |
| chr2.1 | exon | 57694634 | 57694929 | 57694634 | ID=MS.gene058177.t1.exon2;Parent=MS.gene058177.t1 |
| chr2.1 | CDS | 57694634 | 57694929 | 57694634 | ID=cds.MS.gene058177.t1;Parent=MS.gene058177.t1 |
| Gene Sequence |
| Protein sequence |
