Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43176.t1 | XP_003621623.1 | 99.4 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 5.00E-173 | 617.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43176.t1 | Q8VZ20 | 44.4 | 354 | 144 | 9 | 1 | 341 | 1 | 314 | 4.0e-62 | 240.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43176.t1 | G7KSV7 | 99.4 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 3.6e-173 | 617.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene43176.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049419 | MS.gene43176 | -0.801826 | 7.50E-49 | -1.69E-46 |
| MS.gene049680 | MS.gene43176 | 0.827959 | 1.17E-54 | -1.69E-46 |
| MS.gene050081 | MS.gene43176 | 0.806706 | 7.22E-50 | -1.69E-46 |
| MS.gene053401 | MS.gene43176 | 0.80737 | 5.22E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene43176 | 0.808506 | 3.00E-50 | -1.69E-46 |
| MS.gene055150 | MS.gene43176 | 0.841513 | 4.54E-58 | -1.69E-46 |
| MS.gene057102 | MS.gene43176 | 0.816107 | 6.56E-52 | -1.69E-46 |
| MS.gene058781 | MS.gene43176 | 0.802452 | 5.57E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene43176 | 0.802887 | 4.53E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene43176 | 0.837699 | 4.46E-57 | -1.69E-46 |
| MS.gene05985 | MS.gene43176 | -0.843429 | 1.41E-58 | -1.69E-46 |
| MS.gene059901 | MS.gene43176 | -0.810655 | 1.03E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene43176 | 0.82807 | 1.10E-54 | -1.69E-46 |
| MS.gene060937 | MS.gene43176 | 0.828841 | 7.18E-55 | -1.69E-46 |
| MS.gene061243 | MS.gene43176 | 0.814211 | 1.73E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43176.t1 | MTR_7g020870 | 99.413 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 0.0 | 695 |
| MS.gene43176.t1 | MTR_7g020870 | 99.180 | 244 | 2 | 0 | 1 | 244 | 1 | 244 | 0.0 | 502 |
| MS.gene43176.t1 | MTR_1g112650 | 67.147 | 347 | 77 | 9 | 1 | 341 | 1 | 316 | 6.82e-139 | 397 |
| MS.gene43176.t1 | MTR_8g100130 | 36.232 | 345 | 155 | 12 | 36 | 341 | 43 | 361 | 9.89e-56 | 186 |
| MS.gene43176.t1 | MTR_1g094045 | 29.730 | 148 | 64 | 5 | 41 | 148 | 56 | 203 | 1.28e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43176.t1 | AT2G33550 | 48.295 | 352 | 133 | 9 | 1 | 341 | 1 | 314 | 4.52e-96 | 288 |
| MS.gene43176.t1 | AT4G31270 | 33.913 | 115 | 70 | 1 | 39 | 153 | 17 | 125 | 8.28e-17 | 80.1 |
| MS.gene43176.t1 | AT2G35640 | 34.711 | 121 | 62 | 5 | 41 | 148 | 22 | 138 | 2.51e-12 | 67.4 |
Find 119 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGATGTAGAGCCCGTTTC+TGG | 0.174990 | 7.2:-78411768 | None:intergenic |
| CCTTCACCTGTTCCTATATC+AGG | 0.202031 | 7.2:+78408983 | MS.gene43176:CDS |
| ACAGTTCCATCATCGGAATT+AGG | 0.210777 | 7.2:-78408350 | None:intergenic |
| TTGGACTAGGCAGGAGATTT+TGG | 0.244674 | 7.2:+78408448 | MS.gene43176:CDS |
| AAACCGGGTCGGAATGGGTC+TGG | 0.265216 | 7.2:+78408509 | MS.gene43176:CDS |
| GATAAAGGAGTGGGAGAGTC+AGG | 0.272993 | 7.2:+78408652 | MS.gene43176:CDS |
| CAGTTCCATCATCGGAATTA+GGG | 0.288650 | 7.2:-78408349 | None:intergenic |
| TTCATATTTATGATAGTAAT+AGG | 0.301580 | 7.2:+78408882 | MS.gene43176:CDS |
| GGCTGGTTGTTTCTCATTGT+TGG | 0.301660 | 7.2:-78411739 | None:intergenic |
| TTTCATTCACTTTATGGCTT+TGG | 0.307015 | 7.2:+78408316 | None:intergenic |
| GGTCGGAATGGGTCTGGGTT+TGG | 0.340314 | 7.2:+78408515 | MS.gene43176:CDS |
| GAATGTGTCGGTGTCGGTTT+CGG | 0.345627 | 7.2:+78408835 | MS.gene43176:CDS |
| CTCTTCATTGCCGTCTCCAT+TGG | 0.349024 | 7.2:-78411820 | None:intergenic |
| TTCCTTCTCCTTGGCAGCCT+CGG | 0.354622 | 7.2:-78409733 | None:intergenic |
| CAAAATAACCAACCTGATAT+AGG | 0.358309 | 7.2:-78408995 | None:intergenic |
| TGCTGAAAGCCGGTTTAAAC+CGG | 0.361320 | 7.2:+78408493 | MS.gene43176:CDS |
| GGCAGCATCGGTTGTTGTTC+CGG | 0.362479 | 7.2:+78408811 | MS.gene43176:CDS |
| TCCATCCTCGCCACCGTTCA+CGG | 0.362719 | 7.2:-78408402 | None:intergenic |
| TCCGATGATGGAACTGTTAA+CGG | 0.379041 | 7.2:+78408356 | MS.gene43176:CDS |
| GGCTGCAGCTGTGGCAGCAT+CGG | 0.381376 | 7.2:+78408799 | MS.gene43176:CDS |
| GAAGAAACCAACGCCCATTT+CGG | 0.382737 | 7.2:-78408548 | None:intergenic |
| GAGATGAAACGGAGTCGTTT+TGG | 0.385379 | 7.2:+78408678 | MS.gene43176:CDS |
| TTGCAGTTTCATTCTGCTGC+TGG | 0.394241 | 7.2:-78411944 | None:intergenic |
| AACCGGGTCGGAATGGGTCT+GGG | 0.399338 | 7.2:+78408510 | MS.gene43176:CDS |
| CCCGTTTCTGGATTCGAGGC+TGG | 0.399420 | 7.2:-78411756 | None:intergenic |
| GTAAGAAACACGGTGTGAAC+CGG | 0.402207 | 7.2:+78408576 | MS.gene43176:CDS |
| TAGTCAATTAATTGATGTAT+TGG | 0.403614 | 7.2:+78411857 | MS.gene43176:CDS |
| TTGGTTCGAGTGAACCGAAA+TGG | 0.407548 | 7.2:+78408534 | MS.gene43176:CDS |
| CCATCATCGGAATTAGGGTT+TGG | 0.414944 | 7.2:-78408344 | None:intergenic |
| CATTCCGACCCGGTTTAAAC+CGG | 0.422032 | 7.2:-78408502 | None:intergenic |
| GATGCTAAGTGAACAATTAG+AGG | 0.427523 | 7.2:+78411893 | MS.gene43176:CDS |
| CGGAGATTATAAGAAGATAA+AGG | 0.430532 | 7.2:+78408637 | MS.gene43176:CDS |
| CTTGAGCATTTCCTTCTCCT+TGG | 0.433995 | 7.2:-78409742 | None:intergenic |
| CTTTATCTTCTTATAATCTC+CGG | 0.440339 | 7.2:-78408636 | None:intergenic |
| GATAAGCTTGCAAATGCTCT+TGG | 0.446812 | 7.2:+78411987 | MS.gene43176:CDS |
| GCCGTCGATGGCGGTGGCAG+CGG | 0.449844 | 7.2:+78408778 | MS.gene43176:CDS |
| GTCGGTGTCGGTTTCGGAGA+CGG | 0.458922 | 7.2:+78408841 | MS.gene43176:CDS |
| CGGTTTAAACCGGGTCGGAA+TGG | 0.460221 | 7.2:+78408503 | MS.gene43176:CDS |
| AGGAAAGTGAGTGGTGAGGA+TGG | 0.468097 | 7.2:+78408902 | MS.gene43176:CDS |
| CATCTCAAGGGGAACGTAAG+AGG | 0.469277 | 7.2:+78411784 | MS.gene43176:CDS |
| GGTTTAAACCGGGTCGGAAT+GGG | 0.469821 | 7.2:+78408504 | MS.gene43176:CDS |
| TCGGTTTCGGAGACGGTTGG+AGG | 0.471862 | 7.2:+78408848 | MS.gene43176:CDS |
| GGAGACGGTTGGAGGGGATG+AGG | 0.473755 | 7.2:+78408856 | MS.gene43176:CDS |
| GCCGCTGCCACCGCCATCGA+CGG | 0.475194 | 7.2:-78408779 | None:intergenic |
| CCAAACCCTAATTCCGATGA+TGG | 0.478565 | 7.2:+78408344 | MS.gene43176:CDS |
| TGGTTCGAGTGAACCGAAAT+GGG | 0.480374 | 7.2:+78408535 | MS.gene43176:CDS |
| AACCAACCTGATATAGGAAC+AGG | 0.482028 | 7.2:-78408989 | None:intergenic |
| ACCAGCCTCGAATCCAGAAA+CGG | 0.487810 | 7.2:+78411755 | MS.gene43176:CDS |
| CACCGCTTCCTACACTGAAT+CGG | 0.488900 | 7.2:-78408602 | None:intergenic |
| GCCGTGAACGGTGGCGAGGA+TGG | 0.493423 | 7.2:+78408401 | MS.gene43176:CDS |
| GGTGGCAGCGGCTGCAGCTG+TGG | 0.495633 | 7.2:+78408790 | MS.gene43176:CDS |
| CTCGCCACCGTTCACGGCGG+AGG | 0.497849 | 7.2:-78408396 | None:intergenic |
| TCCGGTGAATGTGTCGGTGT+CGG | 0.501303 | 7.2:+78408829 | MS.gene43176:CDS |
| CGAGGCTGCCACGTTGGACT+AGG | 0.508267 | 7.2:+78408435 | MS.gene43176:CDS |
| GGAATGATTTGAGGAGAGAG+AGG | 0.508729 | 7.2:+78408708 | MS.gene43176:CDS |
| GAGTCAGGTGAGAGATGAAA+CGG | 0.509162 | 7.2:+78408667 | MS.gene43176:CDS |
| GCTGCCACGTTGGACTAGGC+AGG | 0.510527 | 7.2:+78408439 | MS.gene43176:CDS |
| CCACTCCTCCGAGGCTGCCA+AGG | 0.511072 | 7.2:+78409725 | MS.gene43176:CDS |
| GGTTGATGAGGAATGATTTG+AGG | 0.515241 | 7.2:+78408699 | MS.gene43176:CDS |
| CCAGCCTCGAATCCAGAAAC+GGG | 0.515344 | 7.2:+78411756 | MS.gene43176:CDS |
| TAAGAAACACGGTGTGAACC+GGG | 0.516907 | 7.2:+78408577 | MS.gene43176:CDS |
| GTGTCGGTTTCGGAGACGGT+TGG | 0.520719 | 7.2:+78408845 | MS.gene43176:CDS |
| CTCCGAGGCTGCCAAGGAGA+AGG | 0.523413 | 7.2:+78409731 | MS.gene43176:CDS |
| CGGTTTCGGAGACGGTTGGA+GGG | 0.523976 | 7.2:+78408849 | MS.gene43176:CDS |
| TGATTCGCCGTCGATGGCGG+TGG | 0.527873 | 7.2:+78408772 | MS.gene43176:CDS |
| AGGAGAGAGAGGAAATTGCC+TGG | 0.529803 | 7.2:+78408719 | MS.gene43176:CDS |
| AGAGCCCGTTTCTGGATTCG+AGG | 0.531658 | 7.2:-78411760 | None:intergenic |
| ACCGACACCGACACATTCAC+CGG | 0.534766 | 7.2:-78408830 | None:intergenic |
| ACCGTTAACAGTTCCATCAT+CGG | 0.535210 | 7.2:-78408357 | None:intergenic |
| GATACTTGATTCGCCGTCGA+TGG | 0.535395 | 7.2:+78408766 | MS.gene43176:CDS |
| TTATAAGAAGATAAAGGAGT+GGG | 0.535976 | 7.2:+78408643 | MS.gene43176:CDS |
| GAAACGGGCTCTACATCTCA+AGG | 0.544821 | 7.2:+78411771 | MS.gene43176:CDS |
| CCACCGTTCACGGCGGAGGA+CGG | 0.551882 | 7.2:-78408392 | None:intergenic |
| CTTCTCCTTGGCAGCCTCGG+AGG | 0.552038 | 7.2:-78409730 | None:intergenic |
| ATTATAAGAAGATAAAGGAG+TGG | 0.554162 | 7.2:+78408642 | MS.gene43176:CDS |
| AAGGGGAACGTAAGAGGAAG+CGG | 0.555390 | 7.2:+78411790 | MS.gene43176:CDS |
| GGTTTCGGAGACGGTTGGAG+GGG | 0.562864 | 7.2:+78408850 | MS.gene43176:CDS |
| GAAAGAGTGATGCTGAAAGC+CGG | 0.563160 | 7.2:+78408483 | MS.gene43176:CDS |
| CCGTCCTCCGCCGTGAACGG+TGG | 0.563465 | 7.2:+78408392 | MS.gene43176:CDS |
| AACCCAGACCCATTCCGACC+CGG | 0.563556 | 7.2:-78408512 | None:intergenic |
| CCTTGGCAGCCTCGGAGGAG+TGG | 0.564966 | 7.2:-78409725 | None:intergenic |
| TCCTACACTGAATCGGACCC+CGG | 0.566040 | 7.2:-78408595 | None:intergenic |
| GACGGTTGGAGGGGATGAGG+AGG | 0.566380 | 7.2:+78408859 | MS.gene43176:CDS |
| AGGAAGCGGTTCGCAACCAA+TGG | 0.566583 | 7.2:+78411804 | MS.gene43176:CDS |
| CAACGTGGCAGCCTCGCCGT+TGG | 0.571589 | 7.2:-78408428 | None:intergenic |
| CCACCGTCCTCCGCCGTGAA+CGG | 0.574662 | 7.2:+78408389 | MS.gene43176:CDS |
| CAACGGCGAGGCTGCCACGT+TGG | 0.578495 | 7.2:+78408429 | MS.gene43176:CDS |
| CGATTCAGTGTAGGAAGCGG+TGG | 0.579523 | 7.2:+78408603 | MS.gene43176:CDS |
| GAGTGAACCGAAATGGGCGT+TGG | 0.586856 | 7.2:+78408541 | MS.gene43176:CDS |
| CTCCGCCGTGAACGGTGGCG+AGG | 0.588326 | 7.2:+78408397 | MS.gene43176:CDS |
| GTCCGATTCAGTGTAGGAAG+CGG | 0.593847 | 7.2:+78408600 | MS.gene43176:CDS |
| GCTGAAAGCCGGTTTAAACC+GGG | 0.593885 | 7.2:+78408494 | MS.gene43176:CDS |
| AAGCGGTGGAGCAACCTCGC+CGG | 0.597218 | 7.2:+78408617 | MS.gene43176:CDS |
| CAATGGAGACGGCAATGAAG+AGG | 0.604269 | 7.2:+78411821 | MS.gene43176:CDS |
| GGAAAGTGAGTGGTGAGGAT+GGG | 0.605368 | 7.2:+78408903 | MS.gene43176:CDS |
| TGTTGTTCCGGTGAATGTGT+CGG | 0.606938 | 7.2:+78408823 | MS.gene43176:CDS |
| TAATAGGAAAGTGAGTGGTG+AGG | 0.611943 | 7.2:+78408898 | MS.gene43176:CDS |
| GGAGAGAGAGGAAATTGCCT+GGG | 0.612198 | 7.2:+78408720 | MS.gene43176:CDS |
| ACTTGATTCGCCGTCGATGG+CGG | 0.613112 | 7.2:+78408769 | MS.gene43176:CDS |
| CGGTTCGCAACCAATGGAGA+CGG | 0.613454 | 7.2:+78411810 | MS.gene43176:CDS |
| CCGTTCACGGCGGAGGACGG+TGG | 0.619410 | 7.2:-78408389 | None:intergenic |
| AAACGGGCTCTACATCTCAA+GGG | 0.623139 | 7.2:+78411772 | MS.gene43176:CDS |
| CAAGGAGAAGGAAATGCTCA+AGG | 0.623679 | 7.2:+78409743 | MS.gene43176:CDS |
| GATGGAACTGTTAACGGTAA+CGG | 0.629880 | 7.2:+78408362 | MS.gene43176:CDS |
| CCTGATATAGGAACAGGTGA+AGG | 0.639915 | 7.2:-78408983 | None:intergenic |
| AACGGGCTCTACATCTCAAG+GGG | 0.641332 | 7.2:+78411773 | MS.gene43176:CDS |
| TGGAGACGGCAATGAAGAGG+AGG | 0.641529 | 7.2:+78411824 | MS.gene43176:CDS |
| TCTTCGTATTGTAAGAAACA+CGG | 0.643626 | 7.2:+78408566 | MS.gene43176:CDS |
| GATAGTAATAGGAAAGTGAG+TGG | 0.654357 | 7.2:+78408893 | MS.gene43176:CDS |
| ACCTCCTTATCAAAATACCC+AGG | 0.654771 | 7.2:-78408737 | None:intergenic |
| TGGCGAGGATGGAAAACCAA+CGG | 0.670801 | 7.2:+78408412 | MS.gene43176:CDS |
| TCTTCTTATAATCTCCGGCG+AGG | 0.675112 | 7.2:-78408631 | None:intergenic |
| ACCGGGGTCCGATTCAGTGT+AGG | 0.687179 | 7.2:+78408594 | MS.gene43176:CDS |
| AAGAAACACGGTGTGAACCG+GGG | 0.696776 | 7.2:+78408578 | MS.gene43176:CDS |
| AAAGCCGGTTTAAACCGGGT+CGG | 0.699962 | 7.2:+78408498 | MS.gene43176:CDS |
| AGGATGGAAAACCAACGGCG+AGG | 0.725001 | 7.2:+78408417 | MS.gene43176:CDS |
| ATCTCCTGCCTAGTCCAACG+TGG | 0.727740 | 7.2:-78408443 | None:intergenic |
| CAGTTTCTACCACTCCTCCG+AGG | 0.732051 | 7.2:+78409716 | MS.gene43176:CDS |
| ATCCTCGCCACCGTTCACGG+CGG | 0.733386 | 7.2:-78408399 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTAATGATTGAAATCA+TGG | + | chr7.2:78410116-78410135 | MS.gene43176:intron | 15.0% |
| !! | ATTTAAATAATTACAGCTAT+TGG | + | chr7.2:78409206-78409225 | MS.gene43176:intron | 15.0% |
| !! | GAATTAACAAAATTTCAAAA+TGG | + | chr7.2:78411091-78411110 | MS.gene43176:intron | 15.0% |
| !! | GATTTCAATCATTAAATTTA+TGG | - | chr7.2:78410115-78410134 | None:intergenic | 15.0% |
| !! | TATATAATAGTGTTAATTAC+AGG | + | chr7.2:78409416-78409435 | MS.gene43176:intron | 15.0% |
| !! | TTCATATTTATGATAGTAAT+AGG | + | chr7.2:78408882-78408901 | MS.gene43176:CDS | 15.0% |
| !! | TTTAAATAATTACAGCTATT+GGG | + | chr7.2:78409207-78409226 | MS.gene43176:intron | 15.0% |
| !!! | TTTTAGATTGAAATTGTTTT+CGG | + | chr7.2:78409095-78409114 | MS.gene43176:intron | 15.0% |
| !! | AACAAACATAAAACAAATGA+TGG | - | chr7.2:78410629-78410648 | None:intergenic | 20.0% |
| !! | AATAAAAAAACAGTACAGTA+TGG | - | chr7.2:78409556-78409575 | None:intergenic | 20.0% |
| !! | AATTTCAGAAACGAAATTAA+CGG | - | chr7.2:78411142-78411161 | None:intergenic | 20.0% |
| !! | GATAAATATATGATTTACCA+CGG | - | chr7.2:78410341-78410360 | None:intergenic | 20.0% |
| !! | TAGTCAATTAATTGATGTAT+TGG | + | chr7.2:78411857-78411876 | MS.gene43176:CDS | 20.0% |
| !! | TGTCCAAACAAAAAAATATA+AGG | - | chr7.2:78410394-78410413 | None:intergenic | 20.0% |
| !! | TTAAATAATTACAGCTATTG+GGG | + | chr7.2:78409208-78409227 | MS.gene43176:intron | 20.0% |
| !!! | AGTGTTTTATGTTTTAAAGT+TGG | + | chr7.2:78409591-78409610 | MS.gene43176:intron | 20.0% |
| !!! | ATACATTCCTTTACTTTTAT+AGG | + | chr7.2:78411714-78411733 | MS.gene43176:intron | 20.0% |
| !!! | ATATTATCACTTTTCATGAA+TGG | + | chr7.2:78411513-78411532 | MS.gene43176:intron | 20.0% |
| !!! | GTTTTAATACTAGAATGATA+TGG | + | chr7.2:78409814-78409833 | MS.gene43176:intron | 20.0% |
| !!! | TATATTTTTTTGTTTGGACA+TGG | + | chr7.2:78410394-78410413 | MS.gene43176:intron | 20.0% |
| !!! | TCATTTTTTTGAATAATCAC+AGG | + | chr7.2:78409299-78409318 | MS.gene43176:intron | 20.0% |
| !!! | TGACCTTATATTTTTTTGTT+TGG | + | chr7.2:78410388-78410407 | MS.gene43176:intron | 20.0% |
| !!! | TTTAGATTGAAATTGTTTTC+GGG | + | chr7.2:78409096-78409115 | MS.gene43176:intron | 20.0% |
| !!! | TTTTATGTTTTAAAGTTGGA+GGG | + | chr7.2:78409595-78409614 | MS.gene43176:intron | 20.0% |
| ! | AAGGTAAATAGTGTTCTTAA+TGG | + | chr7.2:78409762-78409781 | MS.gene43176:intron | 25.0% |
| ! | AAGTTGTAAGTACTATGTAA+TGG | - | chr7.2:78411573-78411592 | None:intergenic | 25.0% |
| ! | AATTAACCAAAATTCATCTG+CGG | - | chr7.2:78410685-78410704 | None:intergenic | 25.0% |
| ! | ACTATAATAGGTACTAAGTT+TGG | - | chr7.2:78410461-78410480 | None:intergenic | 25.0% |
| ! | AGTACATATAATAGGCATAA+AGG | + | chr7.2:78411624-78411643 | MS.gene43176:intron | 25.0% |
| ! | AGTGTTAATTACAGGTATTA+GGG | + | chr7.2:78409424-78409443 | MS.gene43176:intron | 25.0% |
| ! | ATCAAATTAACTTAGAGTTG+AGG | - | chr7.2:78411067-78411086 | None:intergenic | 25.0% |
| ! | ATTATAAGAAGATAAAGGAG+TGG | + | chr7.2:78408642-78408661 | MS.gene43176:CDS | 25.0% |
| ! | ATTGATGTATTGGAGAAAAA+TGG | + | chr7.2:78411867-78411886 | MS.gene43176:CDS | 25.0% |
| ! | CGTTCTTATGTGATATATTT+GGG | + | chr7.2:78409864-78409883 | MS.gene43176:intron | 25.0% |
| ! | CTATAATAGGTACTAAGTTT+GGG | - | chr7.2:78410460-78410479 | None:intergenic | 25.0% |
| ! | CTCTCAAATCATAATAATAC+TGG | - | chr7.2:78410365-78410384 | None:intergenic | 25.0% |
| ! | CTTTATCTTCTTATAATCTC+CGG | - | chr7.2:78408639-78408658 | None:intergenic | 25.0% |
| ! | TAAATAATTACAGCTATTGG+GGG | + | chr7.2:78409209-78409228 | MS.gene43176:intron | 25.0% |
| ! | TAGTGTTAATTACAGGTATT+AGG | + | chr7.2:78409423-78409442 | MS.gene43176:intron | 25.0% |
| ! | TATAATAGGTACTAAGTTTG+GGG | - | chr7.2:78410459-78410478 | None:intergenic | 25.0% |
| ! | TCGTTCTTATGTGATATATT+TGG | + | chr7.2:78409863-78409882 | MS.gene43176:intron | 25.0% |
| ! | TGAACTTCCTTATGAATAAA+TGG | + | chr7.2:78411338-78411357 | MS.gene43176:intron | 25.0% |
| ! | TTAATAATCAAGGACAACAA+CGG | - | chr7.2:78409665-78409684 | None:intergenic | 25.0% |
| ! | TTATAAGAAGATAAAGGAGT+GGG | + | chr7.2:78408643-78408662 | MS.gene43176:CDS | 25.0% |
| ! | TTGAAACACTGCAATTTAAT+AGG | - | chr7.2:78409513-78409532 | None:intergenic | 25.0% |
| ! | TTGATGTATTGGAGAAAAAT+GGG | + | chr7.2:78411868-78411887 | MS.gene43176:CDS | 25.0% |
| !! | AGAAGATAGCTTTCATATTT+TGG | - | chr7.2:78410512-78410531 | None:intergenic | 25.0% |
| !! | TCTCTAACAATAGTTTTCTT+TGG | + | chr7.2:78411114-78411133 | MS.gene43176:intron | 25.0% |
| !! | TTAGATTGAAATTGTTTTCG+GGG | + | chr7.2:78409097-78409116 | MS.gene43176:intron | 25.0% |
| !! | TTTTCTGCTATTGCATTTTT+GGG | + | chr7.2:78410746-78410765 | MS.gene43176:intron | 25.0% |
| !! | TTTTTCTGCTATTGCATTTT+TGG | + | chr7.2:78410745-78410764 | MS.gene43176:intron | 25.0% |
| !!! | AAATCCAAGGTTTTAAATCT+TGG | + | chr7.2:78410141-78410160 | MS.gene43176:intron | 25.0% |
| !!! | GTTTTATGTTTTAAAGTTGG+AGG | + | chr7.2:78409594-78409613 | MS.gene43176:intron | 25.0% |
| AACACTGCAATTTAATAGGA+AGG | - | chr7.2:78409509-78409528 | None:intergenic | 30.0% | |
| ATGTATAAGTAGCACTTCTA+GGG | - | chr7.2:78411390-78411409 | None:intergenic | 30.0% | |
| ATTAACCAAAATTCATCTGC+GGG | - | chr7.2:78410684-78410703 | None:intergenic | 30.0% | |
| CAAAATAACCAACCTGATAT+AGG | - | chr7.2:78408998-78409017 | None:intergenic | 30.0% | |
| CAATTTAACCCTAAGATTGA+AGG | - | chr7.2:78411251-78411270 | None:intergenic | 30.0% | |
| CATATAATAGGCATAAAGGT+AGG | + | chr7.2:78411628-78411647 | MS.gene43176:intron | 30.0% | |
| CATTGCACAAAGCTATTAAT+TGG | - | chr7.2:78410315-78410334 | None:intergenic | 30.0% | |
| CGGAGATTATAAGAAGATAA+AGG | + | chr7.2:78408637-78408656 | MS.gene43176:CDS | 30.0% | |
| CTATGTCGAGTACATATAAT+AGG | + | chr7.2:78411616-78411635 | MS.gene43176:intron | 30.0% | |
| CTTCAATCTTAGGGTTAAAT+TGG | + | chr7.2:78411249-78411268 | MS.gene43176:intron | 30.0% | |
| GTACACACCATTTATTCATA+AGG | - | chr7.2:78411348-78411367 | None:intergenic | 30.0% | |
| GTAGCATCGTAAACAATAAA+AGG | - | chr7.2:78410653-78410672 | None:intergenic | 30.0% | |
| GTCATGTGATTACATTCAAT+CGG | + | chr7.2:78409176-78409195 | MS.gene43176:intron | 30.0% | |
| GTTGCTCATATTATTTGAGT+AGG | - | chr7.2:78411480-78411499 | None:intergenic | 30.0% | |
| GTTGGTACCTATAAAAGTAA+AGG | - | chr7.2:78411724-78411743 | None:intergenic | 30.0% | |
| TAAAGGAGTTGAGGAATTAA+AGG | - | chr7.2:78411018-78411037 | None:intergenic | 30.0% | |
| TATGTATAAGTAGCACTTCT+AGG | - | chr7.2:78411391-78411410 | None:intergenic | 30.0% | |
| TCTTCGTATTGTAAGAAACA+CGG | + | chr7.2:78408566-78408585 | MS.gene43176:CDS | 30.0% | |
| TGAAATCATGGATAAATCCA+AGG | + | chr7.2:78410128-78410147 | MS.gene43176:intron | 30.0% | |
| TGTTGTGATTCTTAGTATTG+CGG | + | chr7.2:78410167-78410186 | MS.gene43176:intron | 30.0% | |
| TTGAATAATCACAGGTTTCA+AGG | + | chr7.2:78409307-78409326 | MS.gene43176:intron | 30.0% | |
| ! | AAAACTATTGTTATCGACTG+CGG | - | chr7.2:78410061-78410080 | None:intergenic | 30.0% |
| ! | AAGACCAAGATTTAAAACCT+TGG | - | chr7.2:78410148-78410167 | None:intergenic | 30.0% |
| ! | CGTGATTGTTCATTTAAGAT+TGG | + | chr7.2:78410862-78410881 | MS.gene43176:intron | 30.0% |
| ! | GACAACATTGGTTAAAACTA+TGG | - | chr7.2:78409902-78409921 | None:intergenic | 30.0% |
| ! | GTAGCACAATTTACCATTTT+TGG | - | chr7.2:78410552-78410571 | None:intergenic | 30.0% |
| ! | TCAGAACATCAATTTTCAGT+TGG | + | chr7.2:78411917-78411936 | MS.gene43176:CDS | 30.0% |
| ! | TGAAGCACTTTGACTATAAT+AGG | - | chr7.2:78410473-78410492 | None:intergenic | 30.0% |
| ! | TTTGGGATTTCAATAATCCT+AGG | + | chr7.2:78410763-78410782 | MS.gene43176:intron | 30.0% |
| !! | AGGTTGGTTATTTTGTTTCA+TGG | + | chr7.2:78409003-78409022 | MS.gene43176:intron | 30.0% |
| !! | GTTGTTTTCTGATTTTGAGA+AGG | + | chr7.2:78408925-78408944 | MS.gene43176:CDS | 30.0% |
| !! | TTTCGTTTCTGAAATTGTCT+CGG | + | chr7.2:78411146-78411165 | MS.gene43176:intron | 30.0% |
| !!! | GAGATTTTGGTTTTGATACA+GGG | + | chr7.2:78408461-78408480 | MS.gene43176:CDS | 30.0% |
| !!! | GCAGATGAATTTTGGTTAAT+TGG | + | chr7.2:78410684-78410703 | MS.gene43176:intron | 30.0% |
| AAAGCAAGCTGTCTCATAAA+GGG | - | chr7.2:78410601-78410620 | None:intergenic | 35.0% | |
| AATAATCCTAGGACACACAT+AGG | + | chr7.2:78410774-78410793 | MS.gene43176:intron | 35.0% | |
| ACATGTTTGATGTTTGACGT+CGG | - | chr7.2:78409259-78409278 | None:intergenic | 35.0% | |
| ACCCTAAGATTGAAGGATTT+AGG | - | chr7.2:78411244-78411263 | None:intergenic | 35.0% | |
| AGCCTAAATCCTTCAATCTT+AGG | + | chr7.2:78411239-78411258 | MS.gene43176:intron | 35.0% | |
| AGGCATAAAGGTAGGATTTA+AGG | + | chr7.2:78411636-78411655 | MS.gene43176:intron | 35.0% | |
| AGTCCTGAAACTGTAAATGT+TGG | + | chr7.2:78410901-78410920 | MS.gene43176:intron | 35.0% | |
| ATCATCTTGGTCAGATGAAT+AGG | - | chr7.2:78410428-78410447 | None:intergenic | 35.0% | |
| ATGTTGTCAAATATCTGCCA+TGG | + | chr7.2:78409914-78409933 | MS.gene43176:intron | 35.0% | |
| ATTTGAGTAGGCTTAGATTG+TGG | - | chr7.2:78411468-78411487 | None:intergenic | 35.0% | |
| CATCCTTCACAAATTGATCA+TGG | - | chr7.2:78409971-78409990 | None:intergenic | 35.0% | |
| CATGATCAATTTGTGAAGGA+TGG | + | chr7.2:78409969-78409988 | MS.gene43176:intron | 35.0% | |
| CCTTTCTTTGTCTCCAAAAA+TGG | + | chr7.2:78410536-78410555 | MS.gene43176:intron | 35.0% | |
| GAATGTAATCACATGACATG+TGG | - | chr7.2:78409173-78409192 | None:intergenic | 35.0% | |
| GACTCATAATCGCAGATTTA+TGG | + | chr7.2:78410014-78410033 | MS.gene43176:intron | 35.0% | |
| GATAGTAATAGGAAAGTGAG+TGG | + | chr7.2:78408893-78408912 | MS.gene43176:CDS | 35.0% | |
| GATGCTAAGTGAACAATTAG+AGG | + | chr7.2:78411893-78411912 | MS.gene43176:CDS | 35.0% | |
| GCCTAAATCCTTCAATCTTA+GGG | + | chr7.2:78411240-78411259 | MS.gene43176:intron | 35.0% | |
| GTCCTGAAACTGTAAATGTT+GGG | + | chr7.2:78410902-78410921 | MS.gene43176:intron | 35.0% | |
| TACCCAACATTTACAGTTTC+AGG | - | chr7.2:78410907-78410926 | None:intergenic | 35.0% | |
| TCATCTTGGTCAGATGAATA+GGG | - | chr7.2:78410427-78410446 | None:intergenic | 35.0% | |
| TCATGATTCAAGTCATGAGA+AGG | - | chr7.2:78410994-78411013 | None:intergenic | 35.0% | |
| TGAGTCATCATAAAACACCA+TGG | - | chr7.2:78410000-78410019 | None:intergenic | 35.0% | |
| TGCACTAGTGTGTCAAAAAA+AGG | - | chr7.2:78410292-78410311 | None:intergenic | 35.0% | |
| TGGCAGATATTTGACAACAT+TGG | - | chr7.2:78409914-78409933 | None:intergenic | 35.0% | |
| TGTAGAGTAGAATAAGCAAC+TGG | - | chr7.2:78410722-78410741 | None:intergenic | 35.0% | |
| TGTTAATCCGAGACAATTTC+AGG | - | chr7.2:78411190-78411209 | None:intergenic | 35.0% | |
| TTAAATGAACAATCACGCCT+TGG | - | chr7.2:78410859-78410878 | None:intergenic | 35.0% | |
| TTAAGGGATTAAAGGAGTTG+AGG | - | chr7.2:78411027-78411046 | None:intergenic | 35.0% | |
| ! | AAAGGTAGGATTTAAGGTTC+TGG | + | chr7.2:78411642-78411661 | MS.gene43176:intron | 35.0% |
| ! | CTCCTTGTGACTTTTCTTTA+GGG | + | chr7.2:78411440-78411459 | MS.gene43176:intron | 35.0% |
| ! | GGTTTGAGTTAAGGGATTAA+AGG | - | chr7.2:78411035-78411054 | None:intergenic | 35.0% |
| ! | TCCTTGTGACTTTTCTTTAG+GGG | + | chr7.2:78411441-78411460 | MS.gene43176:intron | 35.0% |
| ! | TCTCCTTGTGACTTTTCTTT+AGG | + | chr7.2:78411439-78411458 | MS.gene43176:intron | 35.0% |
| ! | TTCAATGTCACTAGCATTGA+TGG | + | chr7.2:78409528-78409547 | MS.gene43176:intron | 35.0% |
| !! | AGCTCAATTGGTTTGAGTTA+AGG | - | chr7.2:78411044-78411063 | None:intergenic | 35.0% |
| !! | CCATTTTTGGAGACAAAGAA+AGG | - | chr7.2:78410539-78410558 | None:intergenic | 35.0% |
| !! | GCTCAATTGGTTTGAGTTAA+GGG | - | chr7.2:78411043-78411062 | None:intergenic | 35.0% |
| !! | TTCTGATTTTGAGAAGGATG+AGG | + | chr7.2:78408931-78408950 | MS.gene43176:CDS | 35.0% |
| !! | TTTTGAGAAGGATGAGGTTT+TGG | + | chr7.2:78408937-78408956 | MS.gene43176:CDS | 35.0% |
| !! | TTTTTGTTTGGACATGGCTT+AGG | + | chr7.2:78410400-78410419 | MS.gene43176:intron | 35.0% |
| !!! | ATTGCCTGGGTATTTTGATA+AGG | + | chr7.2:78408733-78408752 | MS.gene43176:CDS | 35.0% |
| !!! | GGAGATTTTGGTTTTGATAC+AGG | + | chr7.2:78408460-78408479 | MS.gene43176:CDS | 35.0% |
| !!! | GTTTTAAAGTTGGAGGGTTT+GGG | + | chr7.2:78409601-78409620 | MS.gene43176:intron | 35.0% |
| !!! | TGTTTTAAAGTTGGAGGGTT+TGG | + | chr7.2:78409600-78409619 | MS.gene43176:intron | 35.0% |
| AACCAACCTGATATAGGAAC+AGG | - | chr7.2:78408992-78409011 | None:intergenic | 40.0% | |
| AATCGCAGTTGAATGTGATG+TGG | + | chr7.2:78410192-78410211 | MS.gene43176:intron | 40.0% | |
| ACAGTTCCATCATCGGAATT+AGG | - | chr7.2:78408353-78408372 | None:intergenic | 40.0% | |
| ACCCCTAAAGAAAAGTCACA+AGG | - | chr7.2:78411445-78411464 | None:intergenic | 40.0% | |
| ACCGTTAACAGTTCCATCAT+CGG | - | chr7.2:78408360-78408379 | None:intergenic | 40.0% | |
| ACCTCCTTATCAAAATACCC+AGG | - | chr7.2:78408740-78408759 | None:intergenic | 40.0% | |
| AGATTTATGGCTTTCTGCCA+TGG | + | chr7.2:78410027-78410046 | MS.gene43176:intron | 40.0% | |
| ATAGTCACATCCTAAGCTGA+AGG | - | chr7.2:78411600-78411619 | None:intergenic | 40.0% | |
| CAGTTCCATCATCGGAATTA+GGG | - | chr7.2:78408352-78408371 | None:intergenic | 40.0% | |
| CTCTATAGGATACACATCCA+AGG | + | chr7.2:78410839-78410858 | MS.gene43176:intron | 40.0% | |
| CTGCCATGATCAATTTGTGA+AGG | + | chr7.2:78409965-78409984 | MS.gene43176:intron | 40.0% | |
| GAAAGCAAGCTGTCTCATAA+AGG | - | chr7.2:78410602-78410621 | None:intergenic | 40.0% | |
| GATAAGCTTGCAAATGCTCT+TGG | + | chr7.2:78411987-78412006 | MS.gene43176:CDS | 40.0% | |
| GATGGAACTGTTAACGGTAA+CGG | + | chr7.2:78408362-78408381 | MS.gene43176:CDS | 40.0% | |
| GGGAAAATATACAGCAAGTC+TGG | - | chr7.2:78411370-78411389 | None:intergenic | 40.0% | |
| TAATAGGAAAGTGAGTGGTG+AGG | + | chr7.2:78408898-78408917 | MS.gene43176:CDS | 40.0% | |
| TCTGACCAAGATGATGTGAT+AGG | + | chr7.2:78410433-78410452 | MS.gene43176:intron | 40.0% | |
| TGTGGATCCTGAAATTGTCT+CGG | + | chr7.2:78411180-78411199 | MS.gene43176:intron | 40.0% | |
| TTAGAGTTGAGGAGCTCAAT+TGG | - | chr7.2:78411056-78411075 | None:intergenic | 40.0% | |
| TTGTCAAATATCTGCCATGG+CGG | + | chr7.2:78409917-78409936 | MS.gene43176:intron | 40.0% | |
| ! | ATTAGGGTTAGTGTCGAATC+TGG | + | chr7.2:78409440-78409459 | MS.gene43176:intron | 40.0% |
| ! | CAACTTTTGACCTTCAGCTT+AGG | + | chr7.2:78411587-78411606 | MS.gene43176:intron | 40.0% |
| ! | TTAGTGTCGAATCTGGTGTT+AGG | + | chr7.2:78409447-78409466 | MS.gene43176:intron | 40.0% |
| ! | TTCTTCCCGCAGATGAATTT+TGG | + | chr7.2:78410676-78410695 | MS.gene43176:intron | 40.0% |
| !! | GGTTGATGAGGAATGATTTG+AGG | + | chr7.2:78408699-78408718 | MS.gene43176:CDS | 40.0% |
| !! | TCCGATGATGGAACTGTTAA+CGG | + | chr7.2:78408356-78408375 | MS.gene43176:CDS | 40.0% |
| CAAGGAGAAGGAAATGCTCA+AGG | + | chr7.2:78409743-78409762 | MS.gene43176:CDS | 45.0% | |
| CACCTGTTCCTATATCAGGT+TGG | + | chr7.2:78408987-78409006 | MS.gene43176:intron | 45.0% | |
| CCAAACCCTAATTCCGATGA+TGG | + | chr7.2:78408344-78408363 | MS.gene43176:CDS | 45.0% | |
| CCATCATCGGAATTAGGGTT+TGG | - | chr7.2:78408347-78408366 | None:intergenic | 45.0% | |
| CCTGATATAGGAACAGGTGA+AGG | - | chr7.2:78408986-78409005 | None:intergenic | 45.0% | |
| CCTTCACCTGTTCCTATATC+AGG | + | chr7.2:78408983-78409002 | MS.gene43176:CDS | 45.0% | |
| CTTGAGCATTTCCTTCTCCT+TGG | - | chr7.2:78409745-78409764 | None:intergenic | 45.0% | |
| GAAAGAGTGATGCTGAAAGC+CGG | + | chr7.2:78408483-78408502 | MS.gene43176:CDS | 45.0% | |
| GAAGAAACCAACGCCCATTT+CGG | - | chr7.2:78408551-78408570 | None:intergenic | 45.0% | |
| GAGTCAGGTGAGAGATGAAA+CGG | + | chr7.2:78408667-78408686 | MS.gene43176:CDS | 45.0% | |
| GGAATGATTTGAGGAGAGAG+AGG | + | chr7.2:78408708-78408727 | MS.gene43176:CDS | 45.0% | |
| GTAAGAAACACGGTGTGAAC+CGG | + | chr7.2:78408576-78408595 | MS.gene43176:CDS | 45.0% | |
| GTCTCGGAAAGACAAATGTG+TGG | + | chr7.2:78411162-78411181 | MS.gene43176:intron | 45.0% | |
| TAAGAAACACGGTGTGAACC+GGG | + | chr7.2:78408577-78408596 | MS.gene43176:CDS | 45.0% | |
| TCGCACGAAGGTTGTAAACA+GGG | - | chr7.2:78410813-78410832 | None:intergenic | 45.0% | |
| TCTTCTTATAATCTCCGGCG+AGG | - | chr7.2:78408634-78408653 | None:intergenic | 45.0% | |
| TGCAATCCTATGTGTGTCCT+AGG | - | chr7.2:78410783-78410802 | None:intergenic | 45.0% | |
| TGGTTCGAGTGAACCGAAAT+GGG | + | chr7.2:78408535-78408554 | MS.gene43176:CDS | 45.0% | |
| TGTTGTTCCGGTGAATGTGT+CGG | + | chr7.2:78408823-78408842 | MS.gene43176:CDS | 45.0% | |
| TTCGCACGAAGGTTGTAAAC+AGG | - | chr7.2:78410814-78410833 | None:intergenic | 45.0% | |
| TTGCAGTTTCATTCTGCTGC+TGG | - | chr7.2:78411947-78411966 | None:intergenic | 45.0% | |
| TTTACAACCTTCGTGCGAAC+AGG | + | chr7.2:78410815-78410834 | MS.gene43176:intron | 45.0% | |
| ! | AAACGGGCTCTACATCTCAA+GGG | + | chr7.2:78411772-78411791 | MS.gene43176:CDS | 45.0% |
| ! | AGCTTTGTGCAATGTTACCG+TGG | + | chr7.2:78410321-78410340 | MS.gene43176:intron | 45.0% |
| ! | CTATTGTTATCGACTGCGGA+TGG | - | chr7.2:78410057-78410076 | None:intergenic | 45.0% |
| ! | GAGATGAAACGGAGTCGTTT+TGG | + | chr7.2:78408678-78408697 | MS.gene43176:CDS | 45.0% |
| ! | TGCTGAAAGCCGGTTTAAAC+CGG | + | chr7.2:78408493-78408512 | MS.gene43176:CDS | 45.0% |
| ! | TTGGTTCGAGTGAACCGAAA+TGG | + | chr7.2:78408534-78408553 | MS.gene43176:CDS | 45.0% |
| !! | GGCTGGTTGTTTCTCATTGT+TGG | - | chr7.2:78411742-78411761 | None:intergenic | 45.0% |
| !! | TGAGAAGGATGAGGTTTTGG+TGG | + | chr7.2:78408940-78408959 | MS.gene43176:CDS | 45.0% |
| !! | TTGGACTAGGCAGGAGATTT+TGG | + | chr7.2:78408448-78408467 | MS.gene43176:CDS | 45.0% |
| !!! | GCCTGGGTATTTTGATAAGG+AGG | + | chr7.2:78408736-78408755 | MS.gene43176:CDS | 45.0% |
| !! | AAAATATAAATTAATAATCA+AGG | - | chr7.2:78409675-78409694 | None:intergenic | 5.0% |
| !!! | ATATATATTTTTTTTATGTT+AGG | + | chr7.2:78410246-78410265 | MS.gene43176:intron | 5.0% |
| !!! | TATATATTTTTTTTATGTTA+GGG | + | chr7.2:78410247-78410266 | MS.gene43176:intron | 5.0% |
| AAGAAACACGGTGTGAACCG+GGG | + | chr7.2:78408578-78408597 | MS.gene43176:CDS | 50.0% | |
| AAGGGGAACGTAAGAGGAAG+CGG | + | chr7.2:78411790-78411809 | MS.gene43176:CDS | 50.0% | |
| ACCAGCCTCGAATCCAGAAA+CGG | + | chr7.2:78411755-78411774 | MS.gene43176:CDS | 50.0% | |
| AGGAAAGTGAGTGGTGAGGA+TGG | + | chr7.2:78408902-78408921 | MS.gene43176:CDS | 50.0% | |
| AGGAGAGAGAGGAAATTGCC+TGG | + | chr7.2:78408719-78408738 | MS.gene43176:CDS | 50.0% | |
| ATAGAGTCCTGTTCGCACGA+AGG | - | chr7.2:78410825-78410844 | None:intergenic | 50.0% | |
| CAATGGAGACGGCAATGAAG+AGG | + | chr7.2:78411821-78411840 | MS.gene43176:CDS | 50.0% | |
| CACCGCTTCCTACACTGAAT+CGG | - | chr7.2:78408605-78408624 | None:intergenic | 50.0% | |
| CATCTCAAGGGGAACGTAAG+AGG | + | chr7.2:78411784-78411803 | MS.gene43176:CDS | 50.0% | |
| CATTCCGACCCGGTTTAAAC+CGG | - | chr7.2:78408505-78408524 | None:intergenic | 50.0% | |
| CCTCAACTGCAATCGCATTG+CGG | + | chr7.2:78410215-78410234 | MS.gene43176:intron | 50.0% | |
| CGCACGAAGGTTGTAAACAG+GGG | - | chr7.2:78410812-78410831 | None:intergenic | 50.0% | |
| CTCTTCATTGCCGTCTCCAT+TGG | - | chr7.2:78411823-78411842 | None:intergenic | 50.0% | |
| GATAAAGGAGTGGGAGAGTC+AGG | + | chr7.2:78408652-78408671 | MS.gene43176:CDS | 50.0% | |
| GCACGAAGGTTGTAAACAGG+GGG | - | chr7.2:78410811-78410830 | None:intergenic | 50.0% | |
| GGAAAGTGAGTGGTGAGGAT+GGG | + | chr7.2:78408903-78408922 | MS.gene43176:CDS | 50.0% | |
| GGAGAGAGAGGAAATTGCCT+GGG | + | chr7.2:78408720-78408739 | MS.gene43176:CDS | 50.0% | |
| GGTTTAAACCGGGTCGGAAT+GGG | + | chr7.2:78408504-78408523 | MS.gene43176:CDS | 50.0% | |
| GTCCGATTCAGTGTAGGAAG+CGG | + | chr7.2:78408600-78408619 | MS.gene43176:CDS | 50.0% | |
| TCGTGCGAACAGGACTCTAT+AGG | + | chr7.2:78410825-78410844 | MS.gene43176:intron | 50.0% | |
| TGAGATGTAGAGCCCGTTTC+TGG | - | chr7.2:78411771-78411790 | None:intergenic | 50.0% | |
| TGGCGAGGATGGAAAACCAA+CGG | + | chr7.2:78408412-78408431 | MS.gene43176:CDS | 50.0% | |
| TGGGGCCTATCACATCATCT+TGG | - | chr7.2:78410441-78410460 | None:intergenic | 50.0% | |
| TTGGAGGGTTTGGGAGACAA+TGG | + | chr7.2:78409610-78409629 | MS.gene43176:intron | 50.0% | |
| ! | AAAGCCGGTTTAAACCGGGT+CGG | + | chr7.2:78408498-78408517 | MS.gene43176:CDS | 50.0% |
| ! | AACGGGCTCTACATCTCAAG+GGG | + | chr7.2:78411773-78411792 | MS.gene43176:CDS | 50.0% |
| ! | GAAACGGGCTCTACATCTCA+AGG | + | chr7.2:78411771-78411790 | MS.gene43176:CDS | 50.0% |
| ! | GATACTTGATTCGCCGTCGA+TGG | + | chr7.2:78408766-78408785 | MS.gene43176:CDS | 50.0% |
| ! | GCTGAAAGCCGGTTTAAACC+GGG | + | chr7.2:78408494-78408513 | MS.gene43176:CDS | 50.0% |
| !! | ATATCTGCCATGGCGGATTG+CGG | + | chr7.2:78409924-78409943 | MS.gene43176:intron | 50.0% |
| !! | GAATGTGTCGGTGTCGGTTT+CGG | + | chr7.2:78408835-78408854 | MS.gene43176:CDS | 50.0% |
| !!! | CGGAGTCGTTTTGGTTGATG+AGG | + | chr7.2:78408687-78408706 | MS.gene43176:CDS | 50.0% |
| ACCGACACCGACACATTCAC+CGG | - | chr7.2:78408833-78408852 | None:intergenic | 55.0% | |
| AGGAAGCGGTTCGCAACCAA+TGG | + | chr7.2:78411804-78411823 | MS.gene43176:CDS | 55.0% | |
| AGGATGGAAAACCAACGGCG+AGG | + | chr7.2:78408417-78408436 | MS.gene43176:CDS | 55.0% | |
| ATCTCCTGCCTAGTCCAACG+TGG | - | chr7.2:78408446-78408465 | None:intergenic | 55.0% | |
| CAGTTTCTACCACTCCTCCG+AGG | + | chr7.2:78409716-78409735 | MS.gene43176:CDS | 55.0% | |
| CCAGCCTCGAATCCAGAAAC+GGG | + | chr7.2:78411756-78411775 | MS.gene43176:CDS | 55.0% | |
| CCGCAATGCGATTGCAGTTG+AGG | - | chr7.2:78410218-78410237 | None:intergenic | 55.0% | |
| CGATTCAGTGTAGGAAGCGG+TGG | + | chr7.2:78408603-78408622 | MS.gene43176:CDS | 55.0% | |
| CGGTTCGCAACCAATGGAGA+CGG | + | chr7.2:78411810-78411829 | MS.gene43176:CDS | 55.0% | |
| CGGTTTAAACCGGGTCGGAA+TGG | + | chr7.2:78408503-78408522 | MS.gene43176:CDS | 55.0% | |
| GAGTGAACCGAAATGGGCGT+TGG | + | chr7.2:78408541-78408560 | MS.gene43176:CDS | 55.0% | |
| TCCTACACTGAATCGGACCC+CGG | - | chr7.2:78408598-78408617 | None:intergenic | 55.0% | |
| TGGAGACGGCAATGAAGAGG+AGG | + | chr7.2:78411824-78411843 | MS.gene43176:CDS | 55.0% | |
| TTCCTTCTCCTTGGCAGCCT+CGG | - | chr7.2:78409736-78409755 | None:intergenic | 55.0% | |
| ! | ACTTGATTCGCCGTCGATGG+CGG | + | chr7.2:78408769-78408788 | MS.gene43176:CDS | 55.0% |
| ! | AGAGCCCGTTTCTGGATTCG+AGG | - | chr7.2:78411763-78411782 | None:intergenic | 55.0% |
| ! | TCCGGTGAATGTGTCGGTGT+CGG | + | chr7.2:78408829-78408848 | MS.gene43176:CDS | 55.0% |
| !! | GGCAGCATCGGTTGTTGTTC+CGG | + | chr7.2:78408811-78408830 | MS.gene43176:CDS | 55.0% |
| AAACCGGGTCGGAATGGGTC+TGG | + | chr7.2:78408509-78408528 | MS.gene43176:CDS | 60.0% | |
| AACCCAGACCCATTCCGACC+CGG | - | chr7.2:78408515-78408534 | None:intergenic | 60.0% | |
| AACCGGGTCGGAATGGGTCT+GGG | + | chr7.2:78408510-78408529 | MS.gene43176:CDS | 60.0% | |
| ACCGGGGTCCGATTCAGTGT+AGG | + | chr7.2:78408594-78408613 | MS.gene43176:CDS | 60.0% | |
| CGGTTTCGGAGACGGTTGGA+GGG | + | chr7.2:78408849-78408868 | MS.gene43176:CDS | 60.0% | |
| GGTCGGAATGGGTCTGGGTT+TGG | + | chr7.2:78408515-78408534 | MS.gene43176:CDS | 60.0% | |
| GGTTTCGGAGACGGTTGGAG+GGG | + | chr7.2:78408850-78408869 | MS.gene43176:CDS | 60.0% | |
| TCCATCCTCGCCACCGTTCA+CGG | - | chr7.2:78408405-78408424 | None:intergenic | 60.0% | |
| TCGGTTTCGGAGACGGTTGG+AGG | + | chr7.2:78408848-78408867 | MS.gene43176:CDS | 60.0% | |
| TGTGAAGGATGGCAGCGCCA+TGG | + | chr7.2:78409980-78409999 | MS.gene43176:intron | 60.0% | |
| ! | ACAGCTATTGGGGGCACGTG+TGG | + | chr7.2:78409218-78409237 | MS.gene43176:intron | 60.0% |
| ! | CAGCTATTGGGGGCACGTGT+GGG | + | chr7.2:78409219-78409238 | MS.gene43176:intron | 60.0% |
| ! | CCCGTTTCTGGATTCGAGGC+TGG | - | chr7.2:78411759-78411778 | None:intergenic | 60.0% |
| !! | GTCGGTGTCGGTTTCGGAGA+CGG | + | chr7.2:78408841-78408860 | MS.gene43176:CDS | 60.0% |
| !! | GTGTCGGTTTCGGAGACGGT+TGG | + | chr7.2:78408845-78408864 | MS.gene43176:CDS | 60.0% |
| AAGCGGTGGAGCAACCTCGC+CGG | + | chr7.2:78408617-78408636 | MS.gene43176:CDS | 65.0% | |
| ATCCTCGCCACCGTTCACGG+CGG | - | chr7.2:78408402-78408421 | None:intergenic | 65.0% | |
| CGACTGCGGATGGCAGACCA+TGG | - | chr7.2:78410047-78410066 | None:intergenic | 65.0% | |
| CGAGGCTGCCACGTTGGACT+AGG | + | chr7.2:78408435-78408454 | MS.gene43176:CDS | 65.0% | |
| CTCCGAGGCTGCCAAGGAGA+AGG | + | chr7.2:78409731-78409750 | MS.gene43176:CDS | 65.0% | |
| CTTCTCCTTGGCAGCCTCGG+AGG | - | chr7.2:78409733-78409752 | None:intergenic | 65.0% | |
| GACGGTTGGAGGGGATGAGG+AGG | + | chr7.2:78408859-78408878 | MS.gene43176:CDS | 65.0% | |
| GGAGACGGTTGGAGGGGATG+AGG | + | chr7.2:78408856-78408875 | MS.gene43176:CDS | 65.0% | |
| GGCTGCAGCTGTGGCAGCAT+CGG | + | chr7.2:78408799-78408818 | MS.gene43176:CDS | 65.0% | |
| TCTCCCACCGCAATCCGCCA+TGG | - | chr7.2:78409934-78409953 | None:intergenic | 65.0% | |
| ! | GCTGCCACGTTGGACTAGGC+AGG | + | chr7.2:78408439-78408458 | MS.gene43176:CDS | 65.0% |
| ! | TGATTCGCCGTCGATGGCGG+TGG | + | chr7.2:78408772-78408791 | MS.gene43176:CDS | 65.0% |
| !! | CTGCCATGGCGGATTGCGGT+GGG | + | chr7.2:78409928-78409947 | MS.gene43176:intron | 65.0% |
| !! | TCTGCCATGGCGGATTGCGG+TGG | + | chr7.2:78409927-78409946 | MS.gene43176:intron | 65.0% |
| CAACGGCGAGGCTGCCACGT+TGG | + | chr7.2:78408429-78408448 | MS.gene43176:CDS | 70.0% | |
| CAACGTGGCAGCCTCGCCGT+TGG | - | chr7.2:78408431-78408450 | None:intergenic | 70.0% | |
| CCACCGTCCTCCGCCGTGAA+CGG | + | chr7.2:78408389-78408408 | MS.gene43176:CDS | 70.0% | |
| CCACCGTTCACGGCGGAGGA+CGG | - | chr7.2:78408395-78408414 | None:intergenic | 70.0% | |
| CCACTCCTCCGAGGCTGCCA+AGG | + | chr7.2:78409725-78409744 | MS.gene43176:CDS | 70.0% | |
| CCTTGGCAGCCTCGGAGGAG+TGG | - | chr7.2:78409728-78409747 | None:intergenic | 70.0% | |
| GCCGTGAACGGTGGCGAGGA+TGG | + | chr7.2:78408401-78408420 | MS.gene43176:CDS | 70.0% | |
| CCGTCCTCCGCCGTGAACGG+TGG | + | chr7.2:78408392-78408411 | MS.gene43176:CDS | 75.0% | |
| CCGTTCACGGCGGAGGACGG+TGG | - | chr7.2:78408392-78408411 | None:intergenic | 75.0% | |
| CTCCGCCGTGAACGGTGGCG+AGG | + | chr7.2:78408397-78408416 | MS.gene43176:CDS | 75.0% | |
| CTCGCCACCGTTCACGGCGG+AGG | - | chr7.2:78408399-78408418 | None:intergenic | 75.0% | |
| GCCGCTGCCACCGCCATCGA+CGG | - | chr7.2:78408782-78408801 | None:intergenic | 75.0% | |
| GGTGGCAGCGGCTGCAGCTG+TGG | + | chr7.2:78408790-78408809 | MS.gene43176:CDS | 75.0% | |
| ! | GCCGTCGATGGCGGTGGCAG+CGG | + | chr7.2:78408778-78408797 | MS.gene43176:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 78408329 | 78412031 | 78408329 | ID=MS.gene43176 |
| chr7.2 | mRNA | 78408329 | 78412031 | 78408329 | ID=MS.gene43176.t1;Parent=MS.gene43176 |
| chr7.2 | exon | 78408329 | 78409004 | 78408329 | ID=MS.gene43176.t1.exon1;Parent=MS.gene43176.t1 |
| chr7.2 | CDS | 78408329 | 78409004 | 78408329 | ID=cds.MS.gene43176.t1;Parent=MS.gene43176.t1 |
| chr7.2 | exon | 78409711 | 78409764 | 78409711 | ID=MS.gene43176.t1.exon2;Parent=MS.gene43176.t1 |
| chr7.2 | CDS | 78409711 | 78409764 | 78409711 | ID=cds.MS.gene43176.t1;Parent=MS.gene43176.t1 |
| chr7.2 | exon | 78411736 | 78412031 | 78411736 | ID=MS.gene43176.t1.exon3;Parent=MS.gene43176.t1 |
| chr7.2 | CDS | 78411736 | 78412031 | 78411736 | ID=cds.MS.gene43176.t1;Parent=MS.gene43176.t1 |
| Gene Sequence |
| Protein sequence |
