Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061243.t1 | XP_003609816.1 | 96.7 | 182 | 6 | 0 | 1 | 182 | 1 | 182 | 1.90E-91 | 345.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061243.t1 | F4HWQ8 | 44.9 | 138 | 76 | 0 | 40 | 177 | 24 | 161 | 1.4e-26 | 120.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061243.t1 | B7FMH8 | 96.7 | 182 | 6 | 0 | 1 | 182 | 1 | 182 | 1.4e-91 | 345.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049499 | MS.gene061243 | 0.838158 | 3.39E-57 | -1.69E-46 |
| MS.gene051699 | MS.gene061243 | 0.820448 | 6.82E-53 | -1.69E-46 |
| MS.gene051731 | MS.gene061243 | 0.804248 | 2.37E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene061243 | 0.805358 | 1.39E-49 | -1.69E-46 |
| MS.gene053272 | MS.gene061243 | -0.80466 | 1.94E-49 | -1.69E-46 |
| MS.gene053879 | MS.gene061243 | 0.802808 | 4.71E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene061243 | 0.823978 | 1.03E-53 | -1.69E-46 |
| MS.gene055150 | MS.gene061243 | 0.81172 | 6.08E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene061243 | 0.805689 | 1.18E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene061243 | 0.808206 | 3.47E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene061243 | 0.816591 | 5.11E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene061243 | 0.826816 | 2.20E-54 | -1.69E-46 |
| MS.gene059802 | MS.gene061243 | 0.807447 | 5.03E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene061243 | 0.813966 | 1.96E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene061243 | 0.826529 | 2.58E-54 | -1.69E-46 |
| MS.gene061243 | MS.gene061782 | 0.851212 | 1.03E-60 | -1.69E-46 |
| MS.gene061243 | MS.gene066012 | 0.817359 | 3.44E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene067571 | 0.800638 | 1.31E-48 | -1.69E-46 |
| MS.gene061243 | MS.gene069828 | 0.816991 | 4.16E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene070025 | 0.822925 | 1.82E-53 | -1.69E-46 |
| MS.gene061243 | MS.gene071569 | 0.804849 | 1.77E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene072533 | 0.80841 | 3.14E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene073207 | 0.827636 | 1.40E-54 | -1.69E-46 |
| MS.gene061243 | MS.gene073670 | 0.826999 | 1.99E-54 | -1.69E-46 |
| MS.gene061243 | MS.gene08461 | 0.802581 | 5.24E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene08582 | 0.802426 | 5.64E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene08649 | 0.800136 | 1.66E-48 | -1.69E-46 |
| MS.gene061243 | MS.gene09061 | 0.817781 | 2.76E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene20997 | 0.804546 | 2.05E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene21776 | 0.800287 | 1.55E-48 | -1.69E-46 |
| MS.gene061243 | MS.gene22195 | 0.802832 | 4.65E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene22992 | -0.814531 | 1.47E-51 | -1.69E-46 |
| MS.gene061243 | MS.gene23695 | 0.825275 | 5.12E-54 | -1.69E-46 |
| MS.gene061243 | MS.gene24852 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene28918 | 0.816217 | 6.20E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene30352 | 0.801692 | 7.99E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene32688 | 0.807157 | 5.80E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene32708 | 0.802811 | 4.70E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene32866 | 0.81535 | 9.67E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene32929 | 0.801181 | 1.02E-48 | -1.69E-46 |
| MS.gene061243 | MS.gene33059 | 0.804863 | 1.76E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene34508 | 0.814245 | 1.70E-51 | -1.69E-46 |
| MS.gene061243 | MS.gene39037 | 0.846539 | 2.04E-59 | -1.69E-46 |
| MS.gene061243 | MS.gene42653 | 0.811242 | 7.72E-51 | -1.69E-46 |
| MS.gene061243 | MS.gene42671 | 0.814322 | 1.63E-51 | -1.69E-46 |
| MS.gene061243 | MS.gene43176 | 0.814211 | 1.73E-51 | -1.69E-46 |
| MS.gene061243 | MS.gene43682 | 0.816589 | 5.12E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene44179 | 0.815297 | 9.94E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene46014 | 0.80342 | 3.52E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene46055 | 0.81649 | 5.38E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene46408 | 0.824159 | 9.39E-54 | -1.69E-46 |
| MS.gene061243 | MS.gene47276 | 0.874644 | 5.75E-68 | -1.69E-46 |
| MS.gene061243 | MS.gene51145 | 0.803884 | 2.82E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene52122 | 0.842861 | 2.00E-58 | -1.69E-46 |
| MS.gene061243 | MS.gene53391 | 0.815177 | 1.06E-51 | -1.69E-46 |
| MS.gene061243 | MS.gene55094 | 0.817427 | 3.32E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene55699 | 0.814058 | 1.87E-51 | -1.69E-46 |
| MS.gene061243 | MS.gene55707 | 0.812476 | 4.16E-51 | -1.69E-46 |
| MS.gene061243 | MS.gene56742 | 0.800491 | 1.41E-48 | -1.69E-46 |
| MS.gene061243 | MS.gene57783 | 0.805802 | 1.12E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene59616 | 0.816283 | 5.99E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene59697 | 0.804199 | 2.42E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene60384 | 0.806267 | 8.94E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene61588 | 0.800843 | 1.19E-48 | -1.69E-46 |
| MS.gene061243 | MS.gene62676 | 0.808454 | 3.07E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene62677 | 0.833512 | 5.11E-56 | -1.69E-46 |
| MS.gene061243 | MS.gene62926 | 0.805855 | 1.09E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene63930 | 0.802238 | 6.17E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene65295 | 0.803538 | 3.32E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene68653 | 0.81053 | 1.10E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene68654 | 0.813651 | 2.30E-51 | -1.69E-46 |
| MS.gene061243 | MS.gene69820 | 0.825806 | 3.83E-54 | -1.69E-46 |
| MS.gene061243 | MS.gene70154 | 0.800872 | 1.18E-48 | -1.69E-46 |
| MS.gene061243 | MS.gene72950 | -0.830823 | 2.36E-55 | -1.69E-46 |
| MS.gene061243 | MS.gene73644 | 0.805697 | 1.18E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene74537 | 0.810385 | 1.18E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene74604 | 0.806751 | 7.07E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene74875 | 0.809446 | 1.88E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene75344 | 0.848444 | 6.11E-60 | -1.69E-46 |
| MS.gene061243 | MS.gene80177 | 0.825354 | 4.91E-54 | -1.69E-46 |
| MS.gene061243 | MS.gene80201 | 0.816269 | 6.03E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene82421 | 0.802634 | 5.11E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene83063 | 0.802997 | 4.30E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene86038 | 0.802563 | 5.29E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene87292 | 0.813439 | 2.56E-51 | -1.69E-46 |
| MS.gene061243 | MS.gene88062 | 0.804076 | 2.57E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene88147 | 0.80765 | 4.56E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene89256 | 0.80803 | 3.78E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene91203 | 0.829201 | 5.88E-55 | -1.69E-46 |
| MS.gene061243 | MS.gene91820 | 0.804299 | 2.31E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene92052 | 0.828475 | 8.81E-55 | -1.69E-46 |
| MS.gene061243 | MS.gene93123 | 0.816116 | 6.53E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene93728 | 0.809598 | 1.75E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene94266 | 0.809167 | 2.16E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061243.t1 | MTR_4g122800 | 96.703 | 182 | 6 | 0 | 1 | 182 | 1 | 182 | 6.69e-132 | 367 |
| MS.gene061243.t1 | MTR_4g122750 | 49.451 | 182 | 83 | 2 | 1 | 182 | 1 | 173 | 9.13e-56 | 174 |
| MS.gene061243.t1 | MTR_4g122890 | 44.262 | 183 | 93 | 3 | 1 | 182 | 1 | 175 | 1.64e-47 | 153 |
| MS.gene061243.t1 | MTR_4g122760 | 44.086 | 186 | 90 | 3 | 1 | 182 | 1 | 176 | 9.00e-46 | 149 |
| MS.gene061243.t1 | MTR_4g007280 | 50.000 | 108 | 52 | 2 | 77 | 182 | 1 | 108 | 2.62e-26 | 97.1 |
| MS.gene061243.t1 | MTR_4g122780 | 37.086 | 151 | 79 | 4 | 48 | 182 | 8 | 158 | 1.69e-19 | 81.3 |
| MS.gene061243.t1 | MTR_2g033630 | 30.857 | 175 | 108 | 3 | 12 | 182 | 11 | 176 | 7.28e-19 | 79.7 |
| MS.gene061243.t1 | MTR_4g122660 | 27.624 | 181 | 116 | 6 | 9 | 182 | 4 | 176 | 7.19e-18 | 77.4 |
| MS.gene061243.t1 | MTR_4g122740 | 31.609 | 174 | 110 | 4 | 12 | 182 | 10 | 177 | 2.47e-16 | 73.2 |
| MS.gene061243.t1 | MTR_4g122720 | 28.082 | 146 | 101 | 2 | 41 | 182 | 40 | 185 | 3.61e-13 | 65.1 |
| MS.gene061243.t1 | MTR_2g033740 | 30.114 | 176 | 98 | 6 | 22 | 181 | 20 | 186 | 1.62e-12 | 63.2 |
| MS.gene061243.t1 | MTR_2g033720 | 29.480 | 173 | 103 | 5 | 22 | 181 | 20 | 186 | 1.79e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061243.t1 | AT1G47960 | 46.154 | 143 | 77 | 0 | 40 | 182 | 24 | 166 | 4.50e-40 | 134 |
| MS.gene061243.t1 | AT1G47960 | 44.928 | 138 | 76 | 0 | 40 | 177 | 24 | 161 | 1.58e-36 | 126 |
| MS.gene061243.t1 | AT3G17140 | 36.842 | 95 | 58 | 2 | 89 | 182 | 19 | 112 | 1.25e-13 | 64.3 |
| MS.gene061243.t1 | AT3G17150 | 27.273 | 143 | 102 | 1 | 42 | 182 | 39 | 181 | 9.84e-12 | 61.2 |
| MS.gene061243.t1 | AT3G17152 | 26.404 | 178 | 125 | 4 | 7 | 181 | 1 | 175 | 1.15e-11 | 60.8 |
Find 34 sgRNAs with CRISPR-Local
Find 37 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGGCAAACATTGTAATT+TGG | 0.270319 | 8.3:-6002091 | None:intergenic |
| CAGTCTTTGAAGGCATATTC+TGG | 0.284723 | 8.3:+6002112 | MS.gene061243:CDS |
| ACCTCTGCTGGTGATGTAAC+AGG | 0.308788 | 8.3:+6002136 | MS.gene061243:CDS |
| GTACTTCTGCTTTGGATTGT+TGG | 0.314380 | 8.3:-6002010 | None:intergenic |
| GGAAATTAGTACTTCTGCTT+TGG | 0.326142 | 8.3:-6002018 | None:intergenic |
| ACCTCAAGCTATTGAAGCTT+TGG | 0.326895 | 8.3:+6002306 | MS.gene061243:CDS |
| AGGAATAAGCAAAGAGTTAG+AGG | 0.339032 | 8.3:-6001959 | None:intergenic |
| AGCTACAAAGGTTGAGAAAT+GGG | 0.347926 | 8.3:+6002224 | MS.gene061243:CDS |
| CACCATCTTCTGCAAACTTA+GGG | 0.376121 | 8.3:-6002339 | None:intergenic |
| GCACCATCTTCTGCAAACTT+AGG | 0.382996 | 8.3:-6002340 | None:intergenic |
| TTCTCAACCTTTGTAGCTGG+TGG | 0.401916 | 8.3:-6002219 | None:intergenic |
| GCTATTGAAGCTTTGGAGAA+AGG | 0.407146 | 8.3:+6002313 | MS.gene061243:CDS |
| CATTTCTCAACCTTTGTAGC+TGG | 0.408972 | 8.3:-6002222 | None:intergenic |
| CTATTGAAGCTTTGGAGAAA+GGG | 0.422212 | 8.3:+6002314 | MS.gene061243:CDS |
| TGTTTGCCTTCAGTCTTTGA+AGG | 0.426146 | 8.3:+6002102 | MS.gene061243:CDS |
| CAGCTACAAAGGTTGAGAAA+TGG | 0.460710 | 8.3:+6002223 | MS.gene061243:CDS |
| ATTGTGAGAGTGAGTTCAAT+GGG | 0.471484 | 8.3:+6002389 | MS.gene061243:CDS |
| TTACGATAACAATAGCTTGA+AGG | 0.481941 | 8.3:-6001979 | None:intergenic |
| GCATATTCTGGTACCTCTGC+TGG | 0.484173 | 8.3:+6002124 | MS.gene061243:CDS |
| AAGTACTAATTTCCCTTCAA+AGG | 0.496589 | 8.3:+6002027 | MS.gene061243:CDS |
| GACCCTAAGTTTGCAGAAGA+TGG | 0.509313 | 8.3:+6002337 | MS.gene061243:CDS |
| TATTGTGAGAGTGAGTTCAA+TGG | 0.517229 | 8.3:+6002388 | MS.gene061243:CDS |
| AGGAAAGCTTTGAGTTCTTG+TGG | 0.525393 | 8.3:+6002250 | MS.gene061243:CDS |
| TCCAAAGCTTCAATAGCTTG+AGG | 0.539762 | 8.3:-6002307 | None:intergenic |
| AAAGGTTGAGAAATGGGGCT+AGG | 0.543045 | 8.3:+6002230 | MS.gene061243:CDS |
| TGCAAATGATGCTGCTAATG+AGG | 0.560849 | 8.3:+6002360 | MS.gene061243:CDS |
| AACAGGGCTAGCACAAATCA+TGG | 0.565524 | 8.3:+6002153 | MS.gene061243:CDS |
| ATAGAATCCACCAGCTACAA+AGG | 0.567634 | 8.3:+6002212 | MS.gene061243:CDS |
| TATTGAAGCTTTGGAGAAAG+GGG | 0.591796 | 8.3:+6002315 | MS.gene061243:CDS |
| CCCTGTTACATCACCAGCAG+AGG | 0.602085 | 8.3:-6002137 | None:intergenic |
| CCTCTGCTGGTGATGTAACA+GGG | 0.604777 | 8.3:+6002137 | MS.gene061243:CDS |
| AATATGCCTTCAAAGACTGA+AGG | 0.626365 | 8.3:-6002108 | None:intergenic |
| ATGAAAGCAAAAGCAAACGA+TGG | 0.653893 | 8.3:+6002184 | MS.gene061243:CDS |
| GCTACAAAGGTTGAGAAATG+GGG | 0.661587 | 8.3:+6002225 | MS.gene061243:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTTTTTCATCCTTTGAA+GGG | - | chr8.3:6002042-6002061 | None:intergenic | 25.0% |
| AAGTACTAATTTCCCTTCAA+AGG | + | chr8.3:6002027-6002046 | MS.gene061243:CDS | 30.0% | |
| TGAAGGCAAACATTGTAATT+TGG | - | chr8.3:6002094-6002113 | None:intergenic | 30.0% | |
| TTACGATAACAATAGCTTGA+AGG | - | chr8.3:6001982-6002001 | None:intergenic | 30.0% | |
| ! | GATAGTTTTTCATCCTTTGA+AGG | - | chr8.3:6002043-6002062 | None:intergenic | 30.0% |
| AATATGCCTTCAAAGACTGA+AGG | - | chr8.3:6002111-6002130 | None:intergenic | 35.0% | |
| AGCTACAAAGGTTGAGAAAT+GGG | + | chr8.3:6002224-6002243 | MS.gene061243:CDS | 35.0% | |
| AGGAATAAGCAAAGAGTTAG+AGG | - | chr8.3:6001962-6001981 | None:intergenic | 35.0% | |
| ATGAAAGCAAAAGCAAACGA+TGG | + | chr8.3:6002184-6002203 | MS.gene061243:CDS | 35.0% | |
| ATTGTGAGAGTGAGTTCAAT+GGG | + | chr8.3:6002389-6002408 | MS.gene061243:CDS | 35.0% | |
| GGAAATTAGTACTTCTGCTT+TGG | - | chr8.3:6002021-6002040 | None:intergenic | 35.0% | |
| TATTGTGAGAGTGAGTTCAA+TGG | + | chr8.3:6002388-6002407 | MS.gene061243:CDS | 35.0% | |
| !! | CTATTGAAGCTTTGGAGAAA+GGG | + | chr8.3:6002314-6002333 | MS.gene061243:CDS | 35.0% |
| !! | TATTGAAGCTTTGGAGAAAG+GGG | + | chr8.3:6002315-6002334 | MS.gene061243:CDS | 35.0% |
| ACCTCAAGCTATTGAAGCTT+TGG | + | chr8.3:6002306-6002325 | MS.gene061243:CDS | 40.0% | |
| ATAGAATCCACCAGCTACAA+AGG | + | chr8.3:6002212-6002231 | MS.gene061243:CDS | 40.0% | |
| CACCATCTTCTGCAAACTTA+GGG | - | chr8.3:6002342-6002361 | None:intergenic | 40.0% | |
| CAGCTACAAAGGTTGAGAAA+TGG | + | chr8.3:6002223-6002242 | MS.gene061243:CDS | 40.0% | |
| CATTTCTCAACCTTTGTAGC+TGG | - | chr8.3:6002225-6002244 | None:intergenic | 40.0% | |
| GCTACAAAGGTTGAGAAATG+GGG | + | chr8.3:6002225-6002244 | MS.gene061243:CDS | 40.0% | |
| TCCAAAGCTTCAATAGCTTG+AGG | - | chr8.3:6002310-6002329 | None:intergenic | 40.0% | |
| TGCAAATGATGCTGCTAATG+AGG | + | chr8.3:6002360-6002379 | MS.gene061243:CDS | 40.0% | |
| TGTTTGCCTTCAGTCTTTGA+AGG | + | chr8.3:6002102-6002121 | MS.gene061243:CDS | 40.0% | |
| ! | CAGTCTTTGAAGGCATATTC+TGG | + | chr8.3:6002112-6002131 | MS.gene061243:CDS | 40.0% |
| ! | GCATTGTTCTGTTTTGTGAG+TGG | - | chr8.3:6002421-6002440 | None:intergenic | 40.0% |
| ! | GTACTTCTGCTTTGGATTGT+TGG | - | chr8.3:6002013-6002032 | None:intergenic | 40.0% |
| !! | AGGAAAGCTTTGAGTTCTTG+TGG | + | chr8.3:6002250-6002269 | MS.gene061243:CDS | 40.0% |
| !! | GCTATTGAAGCTTTGGAGAA+AGG | + | chr8.3:6002313-6002332 | MS.gene061243:CDS | 40.0% |
| AAAGGTTGAGAAATGGGGCT+AGG | + | chr8.3:6002230-6002249 | MS.gene061243:CDS | 45.0% | |
| GACCCTAAGTTTGCAGAAGA+TGG | + | chr8.3:6002337-6002356 | MS.gene061243:CDS | 45.0% | |
| GCACCATCTTCTGCAAACTT+AGG | - | chr8.3:6002343-6002362 | None:intergenic | 45.0% | |
| TTCTCAACCTTTGTAGCTGG+TGG | - | chr8.3:6002222-6002241 | None:intergenic | 45.0% | |
| ! | AACAGGGCTAGCACAAATCA+TGG | + | chr8.3:6002153-6002172 | MS.gene061243:CDS | 45.0% |
| GCATATTCTGGTACCTCTGC+TGG | + | chr8.3:6002124-6002143 | MS.gene061243:CDS | 50.0% | |
| ! | ACCTCTGCTGGTGATGTAAC+AGG | + | chr8.3:6002136-6002155 | MS.gene061243:CDS | 50.0% |
| ! | CCTCTGCTGGTGATGTAACA+GGG | + | chr8.3:6002137-6002156 | MS.gene061243:CDS | 50.0% |
| CCCTGTTACATCACCAGCAG+AGG | - | chr8.3:6002140-6002159 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 6001944 | 6002492 | 6001944 | ID=MS.gene061243 |
| chr8.3 | mRNA | 6001944 | 6002492 | 6001944 | ID=MS.gene061243.t1;Parent=MS.gene061243 |
| chr8.3 | exon | 6001944 | 6002492 | 6001944 | ID=MS.gene061243.t1.exon1;Parent=MS.gene061243.t1 |
| chr8.3 | CDS | 6001944 | 6002492 | 6001944 | ID=cds.MS.gene061243.t1;Parent=MS.gene061243.t1 |
| Gene Sequence |
| Protein sequence |
