Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44087.t1 | XP_003591093.1 | 96 | 425 | 15 | 1 | 1 | 425 | 1 | 423 | 1.40E-233 | 818.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44087.t1 | Q9FR37 | 65.0 | 420 | 143 | 3 | 4 | 419 | 2 | 421 | 1.2e-153 | 544.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44087.t1 | G7I823 | 96.0 | 425 | 15 | 1 | 1 | 425 | 1 | 423 | 1.0e-233 | 818.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049794 | MS.gene44087 | 0.807816 | 4.20E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene44087 | 0.805037 | 1.62E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene44087 | 0.824425 | 8.13E-54 | -1.69E-46 |
| MS.gene052982 | MS.gene44087 | 0.805083 | 1.58E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene44087 | 0.813865 | 2.06E-51 | -1.69E-46 |
| MS.gene055369 | MS.gene44087 | 0.832425 | 9.52E-56 | -1.69E-46 |
| MS.gene055564 | MS.gene44087 | 0.994924 | 2.08E-211 | -1.69E-46 |
| MS.gene05594 | MS.gene44087 | 0.86468 | 1.02E-64 | -1.69E-46 |
| MS.gene056407 | MS.gene44087 | 0.818047 | 2.40E-52 | -1.69E-46 |
| MS.gene056846 | MS.gene44087 | 0.803933 | 2.75E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene44087 | 0.800166 | 1.64E-48 | -1.69E-46 |
| MS.gene058700 | MS.gene44087 | 0.802352 | 5.84E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene44087 | 0.829513 | 4.94E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene44087 | 0.803761 | 2.99E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene44087 | 0.81075 | 9.87E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene44087 | 0.810397 | 1.18E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene44087 | 0.81713 | 3.87E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44087.t1 | MTR_1g082750 | 96.000 | 425 | 15 | 1 | 1 | 425 | 1 | 423 | 0.0 | 838 |
| MS.gene44087.t1 | MTR_8g107280 | 50.633 | 395 | 194 | 1 | 31 | 425 | 65 | 458 | 2.42e-136 | 401 |
| MS.gene44087.t1 | MTR_8g107280 | 50.505 | 396 | 195 | 1 | 30 | 425 | 64 | 458 | 1.68e-135 | 401 |
| MS.gene44087.t1 | MTR_4g094205 | 48.104 | 422 | 213 | 2 | 8 | 425 | 48 | 467 | 2.29e-128 | 384 |
| MS.gene44087.t1 | MTR_2g010180 | 39.855 | 138 | 82 | 1 | 22 | 159 | 189 | 325 | 2.14e-20 | 94.0 |
| MS.gene44087.t1 | MTR_2g010180 | 39.855 | 138 | 82 | 1 | 22 | 159 | 203 | 339 | 2.23e-20 | 94.0 |
| MS.gene44087.t1 | MTR_2g010180 | 39.855 | 138 | 82 | 1 | 22 | 159 | 189 | 325 | 2.37e-20 | 94.0 |
| MS.gene44087.t1 | MTR_8g094740 | 40.940 | 149 | 87 | 1 | 29 | 177 | 203 | 350 | 3.97e-18 | 87.0 |
| MS.gene44087.t1 | MTR_8g094740 | 40.940 | 149 | 87 | 1 | 29 | 177 | 203 | 350 | 4.18e-18 | 87.0 |
| MS.gene44087.t1 | MTR_8g095600 | 30.921 | 152 | 98 | 3 | 28 | 178 | 225 | 370 | 2.32e-16 | 81.3 |
| MS.gene44087.t1 | MTR_8g095600 | 30.921 | 152 | 98 | 3 | 28 | 178 | 241 | 386 | 2.83e-16 | 81.3 |
| MS.gene44087.t1 | MTR_8g095600 | 30.921 | 152 | 98 | 3 | 28 | 178 | 225 | 370 | 3.14e-16 | 81.3 |
| MS.gene44087.t1 | MTR_8g095600 | 30.921 | 152 | 98 | 3 | 28 | 178 | 225 | 370 | 3.20e-16 | 81.3 |
| MS.gene44087.t1 | MTR_3g096980 | 36.913 | 149 | 93 | 1 | 29 | 177 | 202 | 349 | 3.42e-16 | 81.3 |
| MS.gene44087.t1 | MTR_3g048950 | 46.429 | 112 | 60 | 0 | 65 | 176 | 141 | 252 | 5.42e-15 | 77.4 |
| MS.gene44087.t1 | MTR_8g080840 | 38.655 | 119 | 67 | 2 | 65 | 178 | 140 | 257 | 2.14e-13 | 72.4 |
| MS.gene44087.t1 | MTR_8g097220 | 37.815 | 119 | 68 | 2 | 65 | 178 | 137 | 254 | 7.81e-13 | 70.5 |
| MS.gene44087.t1 | MTR_8g080870 | 38.655 | 119 | 67 | 3 | 65 | 178 | 111 | 228 | 1.16e-12 | 70.1 |
| MS.gene44087.t1 | MTR_8g080890 | 37.815 | 119 | 68 | 3 | 65 | 178 | 141 | 258 | 2.87e-12 | 68.9 |
| MS.gene44087.t1 | MTR_8g080880 | 40.000 | 110 | 60 | 3 | 74 | 178 | 149 | 257 | 6.45e-12 | 67.8 |
| MS.gene44087.t1 | MTR_4g074030 | 34.848 | 132 | 76 | 3 | 65 | 190 | 132 | 259 | 2.59e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44087.t1 | AT1G08980 | 64.762 | 420 | 144 | 3 | 4 | 419 | 2 | 421 | 0.0 | 543 |
| MS.gene44087.t1 | AT3G17970 | 50.253 | 396 | 192 | 2 | 32 | 425 | 61 | 453 | 1.86e-132 | 392 |
| MS.gene44087.t1 | AT3G17970 | 50.253 | 396 | 192 | 2 | 32 | 425 | 61 | 453 | 7.11e-132 | 392 |
| MS.gene44087.t1 | AT5G09420 | 47.406 | 424 | 217 | 3 | 6 | 424 | 44 | 466 | 2.43e-131 | 391 |
| MS.gene44087.t1 | AT5G64440 | 34.899 | 149 | 96 | 1 | 29 | 177 | 197 | 344 | 2.70e-19 | 90.9 |
| MS.gene44087.t1 | AT5G07360 | 32.895 | 152 | 95 | 3 | 28 | 178 | 267 | 412 | 2.10e-16 | 82.0 |
| MS.gene44087.t1 | AT5G07360 | 32.895 | 152 | 95 | 3 | 28 | 178 | 267 | 412 | 2.10e-16 | 82.0 |
| MS.gene44087.t1 | AT3G25660 | 45.536 | 112 | 61 | 0 | 65 | 176 | 142 | 253 | 5.67e-15 | 77.4 |
| MS.gene44087.t1 | AT5G07360 | 31.579 | 152 | 90 | 4 | 28 | 178 | 267 | 405 | 1.00e-12 | 70.5 |
Find 110 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTCAATTGTTGGAGTTTC+TGG | -0.035785 | 1.3:+58362910 | MS.gene44087:CDS |
| ACGTGAAAATTTCAGGATTT+TGG | 0.176886 | 1.3:+58362793 | MS.gene44087:intron |
| GATGAATTTGTTTGTAGTTT+AGG | 0.215401 | 1.3:-58362850 | None:intergenic |
| GATGCTCTTACTTCTCTTCT+TGG | 0.224914 | 1.3:+58362263 | MS.gene44087:CDS |
| CCAACTGCACTTAAAATCTT+TGG | 0.243366 | 1.3:-58361519 | None:intergenic |
| ATATCTGTCATTCTATAATA+AGG | 0.252585 | 1.3:+58362231 | MS.gene44087:CDS |
| TTCTACTGCTCCAACAGTTT+TGG | 0.268666 | 1.3:+58360131 | MS.gene44087:CDS |
| ATGCTCTTACTTCTCTTCTT+GGG | 0.283942 | 1.3:+58362264 | MS.gene44087:CDS |
| CATTGGAACAACTTCTGATT+TGG | 0.298136 | 1.3:-58361072 | None:intergenic |
| TCTTCTGCACAAGGATTTCT+AGG | 0.310065 | 1.3:-58360759 | None:intergenic |
| TCATGGATGAAATGGCTTAC+AGG | 0.314486 | 1.3:+58360193 | MS.gene44087:CDS |
| AAGCTTGTGGATTTCTCTCT+TGG | 0.315423 | 1.3:+58360831 | MS.gene44087:CDS |
| GAATTCATCTGCACCATTCC+TGG | 0.352309 | 1.3:-58363082 | None:intergenic |
| AATGCAGTCAAACCTGATTT+AGG | 0.352459 | 1.3:+58362152 | MS.gene44087:CDS |
| AAAGGGTATGTAGCTGGATT+TGG | 0.358623 | 1.3:+58360072 | MS.gene44087:CDS |
| CTCAGACTATGGAGCATTCA+TGG | 0.369401 | 1.3:+58359820 | MS.gene44087:CDS |
| CTCATGATCCCCACAGTTCC+AGG | 0.370995 | 1.3:+58362820 | MS.gene44087:CDS |
| GAAATTCCCGGACCTAAATC+AGG | 0.371160 | 1.3:-58362164 | None:intergenic |
| ACAGCCTCAGACTCAGACTA+TGG | 0.372131 | 1.3:+58359809 | MS.gene44087:CDS |
| GTACGTGAAGGCCAAAGTTC+CGG | 0.373448 | 1.3:+58361883 | MS.gene44087:CDS |
| CTACTGCAGATGGTATATTA+AGG | 0.375191 | 1.3:+58361843 | MS.gene44087:intron |
| TACGTGAAGGCCAAAGTTCC+GGG | 0.381544 | 1.3:+58361884 | MS.gene44087:CDS |
| TTTAGCCTTCTGTCAATTGT+TGG | 0.387937 | 1.3:+58362901 | MS.gene44087:CDS |
| ATGCTTCAAACCCGGAACTT+TGG | 0.405620 | 1.3:-58361894 | None:intergenic |
| CTCTGCTCTGGCAGTATAAA+CGG | 0.415014 | 1.3:+58360714 | MS.gene44087:intron |
| CTGGATTTGGAAATCCTGAT+TGG | 0.416831 | 1.3:+58360085 | MS.gene44087:CDS |
| AACGGAGAAAATATACACTA+TGG | 0.428548 | 1.3:+58360732 | MS.gene44087:CDS |
| TGATGAGTCCTTGCCCAATC+AGG | 0.432179 | 1.3:-58360099 | None:intergenic |
| AGTGAATTCAAAGGAAGATC+AGG | 0.433606 | 1.3:-58359875 | None:intergenic |
| CATCAGTTTCTCTGGTGGCC+AGG | 0.435075 | 1.3:+58363064 | MS.gene44087:CDS |
| TCTCCCTGCATCAGTTTCTC+TGG | 0.435603 | 1.3:+58363056 | MS.gene44087:CDS |
| AGATCAGGGGAAGAAGAAGT+TGG | 0.455048 | 1.3:-58359860 | None:intergenic |
| CAAATAGATTTGATGTGAAA+GGG | 0.455218 | 1.3:+58360055 | MS.gene44087:intron |
| TCAAATAGATTTGATGTGAA+AGG | 0.459463 | 1.3:+58360054 | MS.gene44087:intron |
| TGTGCAGAAGACCGAGTACC+TGG | 0.460107 | 1.3:+58360771 | MS.gene44087:CDS |
| GTATCAAAACTCTGTGCCAT+TGG | 0.464094 | 1.3:-58361089 | None:intergenic |
| TGCTCTTACTTCTCTTCTTG+GGG | 0.470760 | 1.3:+58362265 | MS.gene44087:CDS |
| TATCTGTCATTCTATAATAA+GGG | 0.472049 | 1.3:+58362232 | MS.gene44087:CDS |
| TAAAACTGTCATGGATGAAA+TGG | 0.474000 | 1.3:+58360185 | MS.gene44087:CDS |
| GTCAAACCTGATTTAGGTCC+GGG | 0.474511 | 1.3:+58362158 | MS.gene44087:CDS |
| AGTGGCTCTGCTGTTGCAGT+TGG | 0.475708 | 1.3:+58360804 | MS.gene44087:CDS |
| GAGTTCCTGCATCGTATTGT+GGG | 0.480183 | 1.3:+58361015 | MS.gene44087:CDS |
| AAAATCATAGGAACTGATAC+AGG | 0.481982 | 1.3:+58360981 | MS.gene44087:intron |
| TTAAGAATAACCATGGTGAA+TGG | 0.483366 | 1.3:+58362126 | MS.gene44087:CDS |
| TGAATTCTTGCTTCACCTTG+TGG | 0.490557 | 1.3:+58363098 | MS.gene44087:CDS |
| GATACGCGTTCTGAAATTCC+CGG | 0.490711 | 1.3:-58362176 | None:intergenic |
| GTTTCTCTGGTGGCCAGGAA+TGG | 0.491029 | 1.3:+58363069 | MS.gene44087:CDS |
| CACATCTAGGATGGTTTGCT+AGG | 0.495260 | 1.3:+58361493 | MS.gene44087:intron |
| AAAGCAGTACAGAAGTTGTA+TGG | 0.496483 | 1.3:+58361660 | MS.gene44087:CDS |
| TGGATTTGGAAATCCTGATT+GGG | 0.503959 | 1.3:+58360086 | MS.gene44087:CDS |
| TGCAGTTGGTGCAAAGCTTG+TGG | 0.505836 | 1.3:+58360818 | MS.gene44087:CDS |
| TGATTGGGCAAGGACTCATC+AGG | 0.506790 | 1.3:+58360101 | MS.gene44087:CDS |
| AGTCAAACCTGATTTAGGTC+CGG | 0.508658 | 1.3:+58362157 | MS.gene44087:CDS |
| TTTGTTTGTAGTTTAGGTGG+AGG | 0.511170 | 1.3:-58362844 | None:intergenic |
| AGGTGGAGGACCTGGAACTG+TGG | 0.511646 | 1.3:-58362830 | None:intergenic |
| TGTAGTTTAGGTGGAGGACC+TGG | 0.515140 | 1.3:-58362838 | None:intergenic |
| GGTGGAGGACCTGGAACTGT+GGG | 0.520381 | 1.3:-58362829 | None:intergenic |
| AGATGCCCTACGCACAACTA+AGG | 0.521800 | 1.3:+58362199 | MS.gene44087:CDS |
| GCCACCAGAGAAACTGATGC+AGG | 0.523962 | 1.3:-58363060 | None:intergenic |
| GAATTTGTTTGTAGTTTAGG+TGG | 0.526766 | 1.3:-58362847 | None:intergenic |
| CTCAGGACAGCCAAAACTGT+TGG | 0.528096 | 1.3:-58360141 | None:intergenic |
| ACAAACAAATTCATCTGACT+TGG | 0.528877 | 1.3:+58362858 | MS.gene44087:CDS |
| ATATTAAGGCATGAAATCCT+TGG | 0.530229 | 1.3:+58361857 | MS.gene44087:CDS |
| GATGTGAAAGGGTATGTAGC+TGG | 0.535739 | 1.3:+58360066 | MS.gene44087:CDS |
| GTGATGGAATGTTGTATACT+TGG | 0.541760 | 1.3:-58361940 | None:intergenic |
| TTACATGTCTTTGACTGCAA+AGG | 0.544281 | 1.3:-58359900 | None:intergenic |
| CTAGAAAGTGCAGCCAGTGA+TGG | 0.544361 | 1.3:-58361956 | None:intergenic |
| ATTCTCCTTAGTTGTGCGTA+GGG | 0.546977 | 1.3:-58362204 | None:intergenic |
| TTGGAGATTCTGCCATGAGA+AGG | 0.548028 | 1.3:-58361053 | None:intergenic |
| TATTCTCCTTAGTTGTGCGT+AGG | 0.550707 | 1.3:-58362205 | None:intergenic |
| GTGCCATGCGATTGCTTCAG+AGG | 0.554166 | 1.3:+58361978 | MS.gene44087:CDS |
| CCCTGCATCAGTTTCTCTGG+TGG | 0.555780 | 1.3:+58363059 | MS.gene44087:CDS |
| CAAATCAGAAGTTGTTCCAA+TGG | 0.559736 | 1.3:+58361073 | MS.gene44087:CDS |
| TTGGAAATCCTGATTGGGCA+AGG | 0.561719 | 1.3:+58360091 | MS.gene44087:CDS |
| GAGCCACTAGAAGATCCTCC+AGG | 0.564074 | 1.3:-58360789 | None:intergenic |
| AGAGTTCCTGCATCGTATTG+TGG | 0.570485 | 1.3:+58361014 | MS.gene44087:CDS |
| TAGAAGATCCTCCAGGTACT+CGG | 0.570948 | 1.3:-58360782 | None:intergenic |
| ACATCTAGGATGGTTTGCTA+GGG | 0.574798 | 1.3:+58361494 | MS.gene44087:intron |
| AGTATACAACATTCCATCAC+TGG | 0.575077 | 1.3:+58361943 | MS.gene44087:CDS |
| CTCATGAAATGCTTCAAACC+CGG | 0.575467 | 1.3:-58361902 | None:intergenic |
| TCAGGGGAAGAAGAAGTTGG+TGG | 0.576808 | 1.3:-58359857 | None:intergenic |
| AAAATCCCACAATACGATGC+AGG | 0.581206 | 1.3:-58361020 | None:intergenic |
| AGTGCAGGTGCCACTTGTGT+TGG | 0.587175 | 1.3:+58360162 | MS.gene44087:CDS |
| ATTCGTGAAACTACATCGAA+AGG | 0.587732 | 1.3:-58361630 | None:intergenic |
| TACTCAGATTATCATTGCAG+AGG | 0.595678 | 1.3:+58361584 | MS.gene44087:CDS |
| CACAAGTGGCACCTGCACTC+AGG | 0.599971 | 1.3:-58360158 | None:intergenic |
| TTGCAGGTAAGCATACCACT+AGG | 0.600924 | 1.3:+58363021 | MS.gene44087:intron |
| TTGTGTTGGTAAAACTGTCA+TGG | 0.611411 | 1.3:+58360176 | MS.gene44087:CDS |
| GTGAATTCAAAGGAAGATCA+GGG | 0.611924 | 1.3:-58359874 | None:intergenic |
| TGCTCCATAGTCTGAGTCTG+AGG | 0.614634 | 1.3:-58359813 | None:intergenic |
| GGTACTCGGTCTTCTGCACA+AGG | 0.622489 | 1.3:-58360768 | None:intergenic |
| GTACCTGGAGGATCTTCTAG+TGG | 0.622763 | 1.3:+58360786 | MS.gene44087:CDS |
| TCTGCAATGATAATCTGAGT+AGG | 0.625913 | 1.3:-58361582 | None:intergenic |
| CTGCATTGATCCATTCACCA+TGG | 0.629877 | 1.3:-58362136 | None:intergenic |
| CCACCAGAGAAACTGATGCA+GGG | 0.640553 | 1.3:-58363059 | None:intergenic |
| TATGAATTTAAGAATAACCA+TGG | 0.640782 | 1.3:+58362119 | MS.gene44087:CDS |
| AAACTCCAACAATTGACAGA+AGG | 0.641345 | 1.3:-58362906 | None:intergenic |
| GCAAAGGTGAGTGAATTCAA+AGG | 0.643640 | 1.3:-58359884 | None:intergenic |
| ATCATAGGAACTGATACAGG+AGG | 0.652771 | 1.3:+58360984 | MS.gene44087:intron |
| ATACCTCTGAAGCAATCGCA+TGG | 0.654077 | 1.3:-58361981 | None:intergenic |
| TGCAGGTAAGCATACCACTA+GGG | 0.654224 | 1.3:+58363022 | MS.gene44087:intron |
| TGGCCTTCACGTACTCACCA+AGG | 0.657061 | 1.3:-58361874 | None:intergenic |
| AATCCTTGGTGAGTACGTGA+AGG | 0.677095 | 1.3:+58361871 | MS.gene44087:CDS |
| GCAGTACAGAAGTTGTATGG+AGG | 0.682525 | 1.3:+58361663 | MS.gene44087:CDS |
| GTGGAGGACCTGGAACTGTG+GGG | 0.688610 | 1.3:-58362828 | None:intergenic |
| GGTCTAATGTGTGTGATGCG+TGG | 0.691925 | 1.3:-58361561 | None:intergenic |
| AGATCATTATACATCCCTAG+TGG | 0.705039 | 1.3:-58363036 | None:intergenic |
| TGAATTCAAAGGAAGATCAG+GGG | 0.705048 | 1.3:-58359873 | None:intergenic |
| TATCATAAATACTCTCCACA+AGG | 0.718171 | 1.3:-58363113 | None:intergenic |
| GCAGAAGACCGAGTACCTGG+AGG | 0.734688 | 1.3:+58360774 | MS.gene44087:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTTAAATAATGAAGAAAT+AGG | - | chr1.3:58362981-58363000 | None:intergenic | 15.0% |
| !!! | ATATGTAGGAATATTTTATT+AGG | + | chr1.3:58360599-58360618 | MS.gene44087:intron | 15.0% |
| !!! | ATTTAAAGTAAAATGAATGA+TGG | + | chr1.3:58360323-58360342 | MS.gene44087:intron | 15.0% |
| !!! | TATAATTTTTATCGTGAAAA+TGG | - | chr1.3:58362656-58362675 | None:intergenic | 15.0% |
| !!! | TCTATTAAATCTCTTTTTTT+GGG | + | chr1.3:58361141-58361160 | MS.gene44087:intron | 15.0% |
| !!! | TTAGTTTTTGTTAAAATCAT+AGG | + | chr1.3:58360969-58360988 | MS.gene44087:intron | 15.0% |
| !! | AAAAAAATACAACTACTCTT+AGG | - | chr1.3:58360636-58360655 | None:intergenic | 20.0% |
| !! | AAGGACTTAAATTTAACTAA+AGG | - | chr1.3:58362073-58362092 | None:intergenic | 20.0% |
| !! | AATATCAATCTAGAGAATAA+GGG | - | chr1.3:58361459-58361478 | None:intergenic | 20.0% |
| !! | ATATCTGTCATTCTATAATA+AGG | + | chr1.3:58362231-58362250 | MS.gene44087:CDS | 20.0% |
| !! | CACAAATAGTAAAAAAATCA+AGG | - | chr1.3:58362092-58362111 | None:intergenic | 20.0% |
| !! | TATAACTTTCTTAAGATTCT+CGG | + | chr1.3:58359931-58359950 | MS.gene44087:intron | 20.0% |
| !! | TATCTGTCATTCTATAATAA+GGG | + | chr1.3:58362232-58362251 | MS.gene44087:CDS | 20.0% |
| !! | TATGAATTTAAGAATAACCA+TGG | + | chr1.3:58362119-58362138 | MS.gene44087:CDS | 20.0% |
| !! | TTACTTATAAGCTTATATGT+AGG | + | chr1.3:58360585-58360604 | MS.gene44087:intron | 20.0% |
| !!! | CTCTATTAAATCTCTTTTTT+TGG | + | chr1.3:58361140-58361159 | MS.gene44087:intron | 20.0% |
| !!! | TAAGAGTAGTTGTATTTTTT+TGG | + | chr1.3:58360635-58360654 | MS.gene44087:intron | 20.0% |
| !!! | TATGTTTTTCCTTTAAATGT+AGG | + | chr1.3:58360915-58360934 | MS.gene44087:intron | 20.0% |
| !!! | TTTTTTACTATTTGTGACAT+AGG | + | chr1.3:58362096-58362115 | MS.gene44087:intron | 20.0% |
| ! | AACTTTGAATCTTATCACAA+GGG | + | chr1.3:58360538-58360557 | MS.gene44087:intron | 25.0% |
| ! | ACTAAAGATTATTAATCCCA+TGG | - | chr1.3:58360954-58360973 | None:intergenic | 25.0% |
| ! | ATACATGTCAAACATCATTA+TGG | - | chr1.3:58361780-58361799 | None:intergenic | 25.0% |
| ! | ATTCTACATATGAAGATTGT+AGG | + | chr1.3:58362603-58362622 | MS.gene44087:intron | 25.0% |
| ! | CAAATAGATTTGATGTGAAA+GGG | + | chr1.3:58360055-58360074 | MS.gene44087:intron | 25.0% |
| ! | GAATATCAATCTAGAGAATA+AGG | - | chr1.3:58361460-58361479 | None:intergenic | 25.0% |
| ! | TAACTTTGAATCTTATCACA+AGG | + | chr1.3:58360537-58360556 | MS.gene44087:intron | 25.0% |
| ! | TCAAATAGATTTGATGTGAA+AGG | + | chr1.3:58360054-58360073 | MS.gene44087:intron | 25.0% |
| ! | TGAAATATGAGTAAACTTTG+AGG | - | chr1.3:58359974-58359993 | None:intergenic | 25.0% |
| ! | TGATAGATACCAAAAACAAA+AGG | - | chr1.3:58362559-58362578 | None:intergenic | 25.0% |
| ! | TTATCTTCATACTACTTATG+AGG | + | chr1.3:58362725-58362744 | MS.gene44087:intron | 25.0% |
| !! | GATGAATTTGTTTGTAGTTT+AGG | - | chr1.3:58362853-58362872 | None:intergenic | 25.0% |
| !! | TATCTAAAACTGATGTCATT+AGG | - | chr1.3:58361281-58361300 | None:intergenic | 25.0% |
| !! | TTTTATTCTTCAAGTGATTG+TGG | + | chr1.3:58362041-58362060 | MS.gene44087:intron | 25.0% |
| !!! | AGATTAGATACAGTTTTTAG+TGG | - | chr1.3:58360491-58360510 | None:intergenic | 25.0% |
| !!! | AGTTGTATTTTTTTGGTGTT+GGG | + | chr1.3:58360642-58360661 | MS.gene44087:intron | 25.0% |
| !!! | GAAGATAACTTTTTGAAAGA+AGG | - | chr1.3:58362713-58362732 | None:intergenic | 25.0% |
| !!! | GCTTTATTTTTCAGTTTCTA+AGG | + | chr1.3:58360277-58360296 | MS.gene44087:intron | 25.0% |
| !!! | TAGTTGTATTTTTTTGGTGT+TGG | + | chr1.3:58360641-58360660 | MS.gene44087:intron | 25.0% |
| AAAATCATAGGAACTGATAC+AGG | + | chr1.3:58360981-58361000 | MS.gene44087:intron | 30.0% | |
| AACGGAGAAAATATACACTA+TGG | + | chr1.3:58360732-58360751 | MS.gene44087:CDS | 30.0% | |
| AAGAAGTAGGTTATGTTGAA+AGG | + | chr1.3:58360427-58360446 | MS.gene44087:intron | 30.0% | |
| ACAAACAAATTCATCTGACT+TGG | + | chr1.3:58362858-58362877 | MS.gene44087:CDS | 30.0% | |
| ACAGTTTACGTGAAAATTTC+AGG | + | chr1.3:58362786-58362805 | MS.gene44087:intron | 30.0% | |
| ATATTAAGGCATGAAATCCT+TGG | + | chr1.3:58361857-58361876 | MS.gene44087:CDS | 30.0% | |
| ATGTAACATATCATTGCTCT+TGG | + | chr1.3:58362377-58362396 | MS.gene44087:intron | 30.0% | |
| CTTGTTTGTCTAAATCAAGT+TGG | + | chr1.3:58360380-58360399 | MS.gene44087:intron | 30.0% | |
| GATACCAAAAACAAAAGGTA+TGG | - | chr1.3:58362554-58362573 | None:intergenic | 30.0% | |
| GATTGAATAAAGAATCTCTC+AGG | - | chr1.3:58361357-58361376 | None:intergenic | 30.0% | |
| GCTCAAAACAACTAATGAAA+TGG | - | chr1.3:58360869-58360888 | None:intergenic | 30.0% | |
| TAAAACTGTCATGGATGAAA+TGG | + | chr1.3:58360185-58360204 | MS.gene44087:CDS | 30.0% | |
| TATCATAAATACTCTCCACA+AGG | - | chr1.3:58363116-58363135 | None:intergenic | 30.0% | |
| TCCATCAAGTTCAATATACA+TGG | - | chr1.3:58360016-58360035 | None:intergenic | 30.0% | |
| TCCATGTATATTGAACTTGA+TGG | + | chr1.3:58360012-58360031 | MS.gene44087:intron | 30.0% | |
| TTAAGAATAACCATGGTGAA+TGG | + | chr1.3:58362126-58362145 | MS.gene44087:CDS | 30.0% | |
| TTATTCGCATATTCACATCT+AGG | + | chr1.3:58361480-58361499 | MS.gene44087:intron | 30.0% | |
| ! | AATGAGTTGAAGACAAAGAA+TGG | - | chr1.3:58362763-58362782 | None:intergenic | 30.0% |
| ! | ACGTGAAAATTTCAGGATTT+TGG | + | chr1.3:58362793-58362812 | MS.gene44087:intron | 30.0% |
| ! | GAATTTGTTTGTAGTTTAGG+TGG | - | chr1.3:58362850-58362869 | None:intergenic | 30.0% |
| !! | ATTCATTGTTCTAGAGGATA+TGG | + | chr1.3:58361167-58361186 | MS.gene44087:intron | 30.0% |
| !! | GAAGAGTATCCTACATTTAA+AGG | - | chr1.3:58360927-58360946 | None:intergenic | 30.0% |
| !! | TTGGTAATAATCCGCAATTT+TGG | + | chr1.3:58361114-58361133 | MS.gene44087:intron | 30.0% |
| !!! | CAGTTTTAGATATTCTCTTG+AGG | + | chr1.3:58361289-58361308 | MS.gene44087:intron | 30.0% |
| !!! | TACACCATACCTTTTGTTTT+TGG | + | chr1.3:58362547-58362566 | MS.gene44087:intron | 30.0% |
| !!! | TTTTTTTCTCAACACTTTGC+AGG | + | chr1.3:58363005-58363024 | MS.gene44087:intron | 30.0% |
| AAACTCCAACAATTGACAGA+AGG | - | chr1.3:58362909-58362928 | None:intergenic | 35.0% | |
| AAAGCAGTACAGAAGTTGTA+TGG | + | chr1.3:58361660-58361679 | MS.gene44087:CDS | 35.0% | |
| AAGTCATCTTTGCTGAAGTT+AGG | - | chr1.3:58362023-58362042 | None:intergenic | 35.0% | |
| AATGCAGTCAAACCTGATTT+AGG | + | chr1.3:58362152-58362171 | MS.gene44087:CDS | 35.0% | |
| AGATCATTATACATCCCTAG+TGG | - | chr1.3:58363039-58363058 | None:intergenic | 35.0% | |
| AGTATACAACATTCCATCAC+TGG | + | chr1.3:58361943-58361962 | MS.gene44087:CDS | 35.0% | |
| AGTCATCTTTGCTGAAGTTA+GGG | - | chr1.3:58362022-58362041 | None:intergenic | 35.0% | |
| AGTGAATTCAAAGGAAGATC+AGG | - | chr1.3:58359878-58359897 | None:intergenic | 35.0% | |
| ATGCTCTTACTTCTCTTCTT+GGG | + | chr1.3:58362264-58362283 | MS.gene44087:CDS | 35.0% | |
| ATTCGTGAAACTACATCGAA+AGG | - | chr1.3:58361633-58361652 | None:intergenic | 35.0% | |
| CAAATCAGAAGTTGTTCCAA+TGG | + | chr1.3:58361073-58361092 | MS.gene44087:CDS | 35.0% | |
| CATTGGAACAACTTCTGATT+TGG | - | chr1.3:58361075-58361094 | None:intergenic | 35.0% | |
| CCAACTGCACTTAAAATCTT+TGG | - | chr1.3:58361522-58361541 | None:intergenic | 35.0% | |
| CTAATTCTCACTGAAGAAGT+AGG | + | chr1.3:58360414-58360433 | MS.gene44087:intron | 35.0% | |
| CTACTGCAGATGGTATATTA+AGG | + | chr1.3:58361843-58361862 | MS.gene44087:intron | 35.0% | |
| GTGAATTCAAAGGAAGATCA+GGG | - | chr1.3:58359877-58359896 | None:intergenic | 35.0% | |
| TAATAGAGCCACCAAAATTG+CGG | - | chr1.3:58361128-58361147 | None:intergenic | 35.0% | |
| TACTCAGATTATCATTGCAG+AGG | + | chr1.3:58361584-58361603 | MS.gene44087:CDS | 35.0% | |
| TCGTGAAAATGGTTGCATAA+AGG | - | chr1.3:58362645-58362664 | None:intergenic | 35.0% | |
| TCTGCAATGATAATCTGAGT+AGG | - | chr1.3:58361585-58361604 | None:intergenic | 35.0% | |
| TCTTCTGATTATTAACCGAG+TGG | - | chr1.3:58360893-58360912 | None:intergenic | 35.0% | |
| TGAATGATGGTTTATGCTCA+CGG | + | chr1.3:58360336-58360355 | MS.gene44087:intron | 35.0% | |
| TGAATTCAAAGGAAGATCAG+GGG | - | chr1.3:58359876-58359895 | None:intergenic | 35.0% | |
| TGGATTTGGAAATCCTGATT+GGG | + | chr1.3:58360086-58360105 | MS.gene44087:CDS | 35.0% | |
| TTACATGTCTTTGACTGCAA+AGG | - | chr1.3:58359903-58359922 | None:intergenic | 35.0% | |
| TTTGAATCTTATCACAAGGG+TGG | + | chr1.3:58360541-58360560 | MS.gene44087:intron | 35.0% | |
| TTTGTTTGTAGTTTAGGTGG+AGG | - | chr1.3:58362847-58362866 | None:intergenic | 35.0% | |
| ! | AGGTTCAGCTTTTCTTTTGT+TGG | + | chr1.3:58360213-58360232 | MS.gene44087:intron | 35.0% |
| ! | GTAATAATCCGCAATTTTGG+TGG | + | chr1.3:58361117-58361136 | MS.gene44087:intron | 35.0% |
| ! | GTGATGGAATGTTGTATACT+TGG | - | chr1.3:58361943-58361962 | None:intergenic | 35.0% |
| ! | TTGTGAAGCTGCATTTTCAA+AGG | - | chr1.3:58361427-58361446 | None:intergenic | 35.0% |
| ! | TTGTGTTGGTAAAACTGTCA+TGG | + | chr1.3:58360176-58360195 | MS.gene44087:CDS | 35.0% |
| ! | TTTAGCCTTCTGTCAATTGT+TGG | + | chr1.3:58362901-58362920 | MS.gene44087:CDS | 35.0% |
| !! | CCAAAGATTTTAAGTGCAGT+TGG | + | chr1.3:58361519-58361538 | MS.gene44087:CDS | 35.0% |
| !! | TATGAGTAAACTTTGAGGTC+AGG | - | chr1.3:58359969-58359988 | None:intergenic | 35.0% |
| AAAATCCCACAATACGATGC+AGG | - | chr1.3:58361023-58361042 | None:intergenic | 40.0% | |
| AAGCTTGTGGATTTCTCTCT+TGG | + | chr1.3:58360831-58360850 | MS.gene44087:CDS | 40.0% | |
| AGTCAAACCTGATTTAGGTC+CGG | + | chr1.3:58362157-58362176 | MS.gene44087:CDS | 40.0% | |
| ATCATAGGAACTGATACAGG+AGG | + | chr1.3:58360984-58361003 | MS.gene44087:intron | 40.0% | |
| ATCTTTGCTGAAGTTAGGGA+TGG | - | chr1.3:58362018-58362037 | None:intergenic | 40.0% | |
| ATTCTCCTTAGTTGTGCGTA+GGG | - | chr1.3:58362207-58362226 | None:intergenic | 40.0% | |
| CTCATGAAATGCTTCAAACC+CGG | - | chr1.3:58361905-58361924 | None:intergenic | 40.0% | |
| CTGGATTTGGAAATCCTGAT+TGG | + | chr1.3:58360085-58360104 | MS.gene44087:CDS | 40.0% | |
| CTGTCAATTGTTGGAGTTTC+TGG | + | chr1.3:58362910-58362929 | MS.gene44087:CDS | 40.0% | |
| GATGCTCTTACTTCTCTTCT+TGG | + | chr1.3:58362263-58362282 | MS.gene44087:CDS | 40.0% | |
| GCAAAGGTGAGTGAATTCAA+AGG | - | chr1.3:58359887-58359906 | None:intergenic | 40.0% | |
| GGGTGAATTCATTGTTCTAG+AGG | + | chr1.3:58361161-58361180 | MS.gene44087:intron | 40.0% | |
| GTAGGTTATGTTGAAAGGAC+AGG | + | chr1.3:58360432-58360451 | MS.gene44087:intron | 40.0% | |
| GTATCAAAACTCTGTGCCAT+TGG | - | chr1.3:58361092-58361111 | None:intergenic | 40.0% | |
| TATAACACAGTACTCTGCTC+TGG | + | chr1.3:58360702-58360721 | MS.gene44087:intron | 40.0% | |
| TATTCTCCTTAGTTGTGCGT+AGG | - | chr1.3:58362208-58362227 | None:intergenic | 40.0% | |
| TCATGGATGAAATGGCTTAC+AGG | + | chr1.3:58360193-58360212 | MS.gene44087:CDS | 40.0% | |
| TCGCATATTCACATCTAGGA+TGG | + | chr1.3:58361484-58361503 | MS.gene44087:intron | 40.0% | |
| TCTTCTGCACAAGGATTTCT+AGG | - | chr1.3:58360762-58360781 | None:intergenic | 40.0% | |
| TGAATTCTTGCTTCACCTTG+TGG | + | chr1.3:58363098-58363117 | MS.gene44087:CDS | 40.0% | |
| TGCTCTTACTTCTCTTCTTG+GGG | + | chr1.3:58362265-58362284 | MS.gene44087:CDS | 40.0% | |
| ! | AAAGGGTATGTAGCTGGATT+TGG | + | chr1.3:58360072-58360091 | MS.gene44087:CDS | 40.0% |
| ! | ACTTGGAAATTTTTCGCGCT+AGG | + | chr1.3:58362875-58362894 | MS.gene44087:CDS | 40.0% |
| ! | CTTGGAAATTTTTCGCGCTA+GGG | + | chr1.3:58362876-58362895 | MS.gene44087:CDS | 40.0% |
| ! | GACAGTTTTACCAACACAAG+TGG | - | chr1.3:58360175-58360194 | None:intergenic | 40.0% |
| ! | GCATCGTATTGTGGGATTTT+CGG | + | chr1.3:58361023-58361042 | MS.gene44087:CDS | 40.0% |
| ! | TTCTACTGCTCCAACAGTTT+TGG | + | chr1.3:58360131-58360150 | MS.gene44087:CDS | 40.0% |
| !! | ACATCTAGGATGGTTTGCTA+GGG | + | chr1.3:58361494-58361513 | MS.gene44087:intron | 40.0% |
| !! | GCACAGAGTTTTGATACTGT+TGG | + | chr1.3:58361095-58361114 | MS.gene44087:CDS | 40.0% |
| !! | TGGAGTTTCTGGATTTTGTC+AGG | + | chr1.3:58362921-58362940 | MS.gene44087:CDS | 40.0% |
| !!! | TAGTTGTTTTGAGCACCACT+CGG | + | chr1.3:58360875-58360894 | MS.gene44087:intron | 40.0% |
| AATCCTTGGTGAGTACGTGA+AGG | + | chr1.3:58361871-58361890 | MS.gene44087:CDS | 45.0% | |
| AGAGTTCCTGCATCGTATTG+TGG | + | chr1.3:58361014-58361033 | MS.gene44087:CDS | 45.0% | |
| AGATCAGGGGAAGAAGAAGT+TGG | - | chr1.3:58359863-58359882 | None:intergenic | 45.0% | |
| AGGATACTCTTCTGCTCCAT+GGG | + | chr1.3:58360935-58360954 | MS.gene44087:intron | 45.0% | |
| ATGCTTCAAACCCGGAACTT+TGG | - | chr1.3:58361897-58361916 | None:intergenic | 45.0% | |
| CTCTGCTCTGGCAGTATAAA+CGG | + | chr1.3:58360714-58360733 | MS.gene44087:intron | 45.0% | |
| GAAATTCCCGGACCTAAATC+AGG | - | chr1.3:58362167-58362186 | None:intergenic | 45.0% | |
| GAATTCATCTGCACCATTCC+TGG | - | chr1.3:58363085-58363104 | None:intergenic | 45.0% | |
| GAGTTCCTGCATCGTATTGT+GGG | + | chr1.3:58361015-58361034 | MS.gene44087:CDS | 45.0% | |
| GCAGTACAGAAGTTGTATGG+AGG | + | chr1.3:58361663-58361682 | MS.gene44087:CDS | 45.0% | |
| GCTCTATACACTACTGCAGA+TGG | + | chr1.3:58361833-58361852 | MS.gene44087:intron | 45.0% | |
| GTCAAACCTGATTTAGGTCC+GGG | + | chr1.3:58362158-58362177 | MS.gene44087:CDS | 45.0% | |
| GTTGTTACTGTGTGTGTGTG+TGG | + | chr1.3:58362943-58362962 | MS.gene44087:intron | 45.0% | |
| TAGAAGATCCTCCAGGTACT+CGG | - | chr1.3:58360785-58360804 | None:intergenic | 45.0% | |
| TAGGATACTCTTCTGCTCCA+TGG | + | chr1.3:58360934-58360953 | MS.gene44087:intron | 45.0% | |
| TGCAGGTAAGCATACCACTA+GGG | + | chr1.3:58363022-58363041 | MS.gene44087:intron | 45.0% | |
| TTGCAGGTAAGCATACCACT+AGG | + | chr1.3:58363021-58363040 | MS.gene44087:intron | 45.0% | |
| TTGGAAATCCTGATTGGGCA+AGG | + | chr1.3:58360091-58360110 | MS.gene44087:CDS | 45.0% | |
| TTGGAGATTCTGCCATGAGA+AGG | - | chr1.3:58361056-58361075 | None:intergenic | 45.0% | |
| ! | CTCAGACTATGGAGCATTCA+TGG | + | chr1.3:58359820-58359839 | MS.gene44087:CDS | 45.0% |
| ! | CTGCATTGATCCATTCACCA+TGG | - | chr1.3:58362139-58362158 | None:intergenic | 45.0% |
| ! | GATGTGAAAGGGTATGTAGC+TGG | + | chr1.3:58360066-58360085 | MS.gene44087:CDS | 45.0% |
| ! | TTCGGTTTTCGTCCTTCTCA+TGG | + | chr1.3:58361041-58361060 | MS.gene44087:CDS | 45.0% |
| !! | ATACCTCTGAAGCAATCGCA+TGG | - | chr1.3:58361984-58362003 | None:intergenic | 45.0% |
| !! | CACATCTAGGATGGTTTGCT+AGG | + | chr1.3:58361493-58361512 | MS.gene44087:intron | 45.0% |
| !! | GATACGCGTTCTGAAATTCC+CGG | - | chr1.3:58362179-58362198 | None:intergenic | 45.0% |
| ACAGCCTCAGACTCAGACTA+TGG | + | chr1.3:58359809-58359828 | MS.gene44087:CDS | 50.0% | |
| AGATGCCCTACGCACAACTA+AGG | + | chr1.3:58362199-58362218 | MS.gene44087:CDS | 50.0% | |
| CCACCAGAGAAACTGATGCA+GGG | - | chr1.3:58363062-58363081 | None:intergenic | 50.0% | |
| CTCAGGACAGCCAAAACTGT+TGG | - | chr1.3:58360144-58360163 | None:intergenic | 50.0% | |
| GGTCTAATGTGTGTGATGCG+TGG | - | chr1.3:58361564-58361583 | None:intergenic | 50.0% | |
| GTACCTGGAGGATCTTCTAG+TGG | + | chr1.3:58360786-58360805 | MS.gene44087:CDS | 50.0% | |
| GTACGTGAAGGCCAAAGTTC+CGG | + | chr1.3:58361883-58361902 | MS.gene44087:CDS | 50.0% | |
| TACGTGAAGGCCAAAGTTCC+GGG | + | chr1.3:58361884-58361903 | MS.gene44087:CDS | 50.0% | |
| TCAGGGGAAGAAGAAGTTGG+TGG | - | chr1.3:58359860-58359879 | None:intergenic | 50.0% | |
| TCTCCCTGCATCAGTTTCTC+TGG | + | chr1.3:58363056-58363075 | MS.gene44087:CDS | 50.0% | |
| TGATGAGTCCTTGCCCAATC+AGG | - | chr1.3:58360102-58360121 | None:intergenic | 50.0% | |
| TGATTGGGCAAGGACTCATC+AGG | + | chr1.3:58360101-58360120 | MS.gene44087:CDS | 50.0% | |
| TGCTCCATAGTCTGAGTCTG+AGG | - | chr1.3:58359816-58359835 | None:intergenic | 50.0% | |
| TGTAGTTTAGGTGGAGGACC+TGG | - | chr1.3:58362841-58362860 | None:intergenic | 50.0% | |
| ! | CTAGAAAGTGCAGCCAGTGA+TGG | - | chr1.3:58361959-58361978 | None:intergenic | 50.0% |
| ! | TGCAGTTGGTGCAAAGCTTG+TGG | + | chr1.3:58360818-58360837 | MS.gene44087:CDS | 50.0% |
| CATCAGTTTCTCTGGTGGCC+AGG | + | chr1.3:58363064-58363083 | MS.gene44087:CDS | 55.0% | |
| CCCTGCATCAGTTTCTCTGG+TGG | + | chr1.3:58363059-58363078 | MS.gene44087:CDS | 55.0% | |
| CTCATGATCCCCACAGTTCC+AGG | + | chr1.3:58362820-58362839 | MS.gene44087:CDS | 55.0% | |
| GAGCCACTAGAAGATCCTCC+AGG | - | chr1.3:58360792-58360811 | None:intergenic | 55.0% | |
| GCCACCAGAGAAACTGATGC+AGG | - | chr1.3:58363063-58363082 | None:intergenic | 55.0% | |
| GGTACTCGGTCTTCTGCACA+AGG | - | chr1.3:58360771-58360790 | None:intergenic | 55.0% | |
| GTGCCATGCGATTGCTTCAG+AGG | + | chr1.3:58361978-58361997 | MS.gene44087:CDS | 55.0% | |
| GTTTCTCTGGTGGCCAGGAA+TGG | + | chr1.3:58363069-58363088 | MS.gene44087:CDS | 55.0% | |
| TGGCCTTCACGTACTCACCA+AGG | - | chr1.3:58361877-58361896 | None:intergenic | 55.0% | |
| TGTGCAGAAGACCGAGTACC+TGG | + | chr1.3:58360771-58360790 | MS.gene44087:CDS | 55.0% | |
| ! | AGTGGCTCTGCTGTTGCAGT+TGG | + | chr1.3:58360804-58360823 | MS.gene44087:CDS | 55.0% |
| !! | AGTGCAGGTGCCACTTGTGT+TGG | + | chr1.3:58360162-58360181 | MS.gene44087:CDS | 55.0% |
| !!! | GTTTTGGCTGTCCTGAGTGC+AGG | + | chr1.3:58360147-58360166 | MS.gene44087:CDS | 55.0% |
| AGGTGGAGGACCTGGAACTG+TGG | - | chr1.3:58362833-58362852 | None:intergenic | 60.0% | |
| CACAAGTGGCACCTGCACTC+AGG | - | chr1.3:58360161-58360180 | None:intergenic | 60.0% | |
| GCAGAAGACCGAGTACCTGG+AGG | + | chr1.3:58360774-58360793 | MS.gene44087:CDS | 60.0% | |
| GGTGGAGGACCTGGAACTGT+GGG | - | chr1.3:58362832-58362851 | None:intergenic | 60.0% | |
| GTGGAGGACCTGGAACTGTG+GGG | - | chr1.3:58362831-58362850 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 58359803 | 58363149 | 58359803 | ID=MS.gene44087 |
| chr1.3 | mRNA | 58359803 | 58363149 | 58359803 | ID=MS.gene44087.t1;Parent=MS.gene44087 |
| chr1.3 | exon | 58359803 | 58359918 | 58359803 | ID=MS.gene44087.t1.exon1;Parent=MS.gene44087.t1 |
| chr1.3 | CDS | 58359803 | 58359918 | 58359803 | ID=cds.MS.gene44087.t1;Parent=MS.gene44087.t1 |
| chr1.3 | exon | 58360062 | 58360214 | 58360062 | ID=MS.gene44087.t1.exon2;Parent=MS.gene44087.t1 |
| chr1.3 | CDS | 58360062 | 58360214 | 58360062 | ID=cds.MS.gene44087.t1;Parent=MS.gene44087.t1 |
| chr1.3 | exon | 58360728 | 58360852 | 58360728 | ID=MS.gene44087.t1.exon3;Parent=MS.gene44087.t1 |
| chr1.3 | CDS | 58360728 | 58360852 | 58360728 | ID=cds.MS.gene44087.t1;Parent=MS.gene44087.t1 |
| chr1.3 | exon | 58360991 | 58361116 | 58360991 | ID=MS.gene44087.t1.exon4;Parent=MS.gene44087.t1 |
| chr1.3 | CDS | 58360991 | 58361116 | 58360991 | ID=cds.MS.gene44087.t1;Parent=MS.gene44087.t1 |
| chr1.3 | exon | 58361502 | 58361684 | 58361502 | ID=MS.gene44087.t1.exon5;Parent=MS.gene44087.t1 |
| chr1.3 | CDS | 58361502 | 58361684 | 58361502 | ID=cds.MS.gene44087.t1;Parent=MS.gene44087.t1 |
| chr1.3 | exon | 58361852 | 58361999 | 58361852 | ID=MS.gene44087.t1.exon6;Parent=MS.gene44087.t1 |
| chr1.3 | CDS | 58361852 | 58361999 | 58361852 | ID=cds.MS.gene44087.t1;Parent=MS.gene44087.t1 |
| chr1.3 | exon | 58362118 | 58362286 | 58362118 | ID=MS.gene44087.t1.exon7;Parent=MS.gene44087.t1 |
| chr1.3 | CDS | 58362118 | 58362286 | 58362118 | ID=cds.MS.gene44087.t1;Parent=MS.gene44087.t1 |
| chr1.3 | exon | 58362808 | 58362942 | 58362808 | ID=MS.gene44087.t1.exon8;Parent=MS.gene44087.t1 |
| chr1.3 | CDS | 58362808 | 58362942 | 58362808 | ID=cds.MS.gene44087.t1;Parent=MS.gene44087.t1 |
| chr1.3 | exon | 58363027 | 58363149 | 58363027 | ID=MS.gene44087.t1.exon9;Parent=MS.gene44087.t1 |
| chr1.3 | CDS | 58363027 | 58363149 | 58363027 | ID=cds.MS.gene44087.t1;Parent=MS.gene44087.t1 |
| Gene Sequence |
| Protein sequence |
