Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055564.t1 | XP_003591093.1 | 96 | 425 | 15 | 1 | 1 | 425 | 1 | 423 | 1.40E-233 | 818.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055564.t1 | Q9FR37 | 65.0 | 420 | 143 | 3 | 4 | 419 | 2 | 421 | 1.2e-153 | 544.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055564.t1 | G7I823 | 96.0 | 425 | 15 | 1 | 1 | 425 | 1 | 423 | 1.0e-233 | 818.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049794 | MS.gene055564 | 0.818011 | 2.45E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene055564 | 0.800125 | 1.67E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene055564 | 0.803655 | 3.14E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene055564 | 0.816233 | 6.15E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene055564 | 0.803802 | 2.93E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene055564 | 0.83502 | 2.14E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene055564 | 0.803604 | 3.22E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene055564 | 0.817151 | 3.83E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene055564 | 0.800409 | 1.46E-48 | -1.69E-46 |
| MS.gene055116 | MS.gene055564 | 0.824368 | 8.38E-54 | -1.69E-46 |
| MS.gene055369 | MS.gene055564 | 0.835037 | 2.12E-56 | -1.69E-46 |
| MS.gene05553 | MS.gene055564 | 0.802638 | 5.10E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene05594 | 0.86948 | 3.00E-66 | -1.69E-46 |
| MS.gene055564 | MS.gene056407 | 0.830029 | 3.70E-55 | -1.69E-46 |
| MS.gene055564 | MS.gene056846 | 0.813052 | 3.11E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene057124 | 0.82019 | 7.82E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene057749 | 0.802894 | 4.52E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene058002 | 0.805361 | 1.39E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene058700 | 0.810435 | 1.15E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene05886 | 0.84454 | 7.10E-59 | -1.69E-46 |
| MS.gene055564 | MS.gene05907 | 0.820233 | 7.64E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene059420 | 0.820239 | 7.62E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene060403 | 0.818359 | 2.04E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene061154 | 0.829222 | 5.81E-55 | -1.69E-46 |
| MS.gene055564 | MS.gene062853 | 0.818403 | 2.00E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene063074 | 0.810815 | 9.56E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene064237 | 0.816989 | 4.16E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene06470 | 0.820663 | 6.09E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene066538 | 0.832757 | 7.88E-56 | -1.69E-46 |
| MS.gene055564 | MS.gene06688 | 0.820419 | 6.93E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene067385 | 0.806106 | 9.66E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene068621 | 0.84059 | 7.93E-58 | -1.69E-46 |
| MS.gene055564 | MS.gene068905 | 0.862567 | 4.62E-64 | -1.69E-46 |
| MS.gene055564 | MS.gene06897 | 0.808676 | 2.76E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene069154 | 0.805306 | 1.42E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene069712 | 0.840873 | 6.69E-58 | -1.69E-46 |
| MS.gene055564 | MS.gene069859 | 0.819941 | 8.92E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene070279 | 0.851062 | 1.13E-60 | -1.69E-46 |
| MS.gene055564 | MS.gene070879 | 0.825285 | 5.09E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene071546 | 0.807097 | 5.97E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene072382 | 0.831513 | 1.60E-55 | -1.69E-46 |
| MS.gene055564 | MS.gene072415 | 0.810196 | 1.30E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene073438 | 0.824773 | 6.73E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene07366 | 0.817425 | 3.32E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene07619 | 0.802286 | 6.03E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene07862 | 0.820499 | 6.64E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene09574 | 0.808727 | 2.69E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene09660 | 0.808198 | 3.49E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene20025 | 0.822839 | 1.91E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene20275 | 0.803689 | 3.09E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene20340 | 0.803976 | 2.70E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene20612 | 0.819016 | 1.45E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene20910 | 0.801751 | 7.77E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene21564 | 0.805792 | 1.13E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene22295 | 0.861479 | 9.97E-64 | -1.69E-46 |
| MS.gene055564 | MS.gene22296 | 0.845266 | 4.52E-59 | -1.69E-46 |
| MS.gene055564 | MS.gene22721 | 0.815037 | 1.14E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene22764 | 0.82567 | 4.13E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene23147 | 0.811275 | 7.59E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene24098 | 0.837741 | 4.35E-57 | -1.69E-46 |
| MS.gene055564 | MS.gene24730 | 0.803575 | 3.27E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene27100 | 0.811169 | 8.01E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene27912 | 0.821714 | 3.49E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene28113 | 0.812669 | 3.77E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene28311 | 0.874519 | 6.34E-68 | -1.69E-46 |
| MS.gene055564 | MS.gene28441 | 0.80702 | 6.20E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene28526 | 0.81448 | 1.51E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene28939 | 0.806514 | 7.93E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene29173 | 0.819221 | 1.30E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene30306 | 0.801299 | 9.62E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene33475 | 0.810616 | 1.06E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene33873 | 0.802341 | 5.88E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene33961 | 0.818268 | 2.14E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene33972 | 0.826063 | 3.33E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene34272 | 0.825782 | 3.89E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene34845 | 0.828156 | 1.05E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene38339 | 0.851319 | 9.59E-61 | -1.69E-46 |
| MS.gene055564 | MS.gene39277 | 0.811678 | 6.21E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene39326 | 0.804889 | 1.74E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene39334 | 0.824545 | 7.62E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene39979 | 0.804646 | 1.96E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene43716 | 0.820564 | 6.42E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene43917 | 0.821615 | 3.67E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene44087 | 0.994924 | 2.08E-211 | -1.69E-46 |
| MS.gene055564 | MS.gene44252 | 0.818646 | 1.76E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene44558 | 0.801205 | 1.00E-48 | -1.69E-46 |
| MS.gene055564 | MS.gene44826 | 0.816039 | 6.79E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene44977 | 0.831281 | 1.82E-55 | -1.69E-46 |
| MS.gene055564 | MS.gene45108 | 0.814039 | 1.89E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene45431 | 0.803997 | 2.67E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene46239 | 0.806801 | 6.90E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene46956 | 0.803981 | 2.69E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene47869 | 0.857735 | 1.33E-62 | -1.69E-46 |
| MS.gene055564 | MS.gene49121 | 0.838375 | 2.98E-57 | -1.69E-46 |
| MS.gene055564 | MS.gene50141 | 0.832928 | 7.15E-56 | -1.69E-46 |
| MS.gene055564 | MS.gene50985 | 0.848234 | 6.98E-60 | -1.69E-46 |
| MS.gene055564 | MS.gene51067 | 0.808227 | 3.44E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene52600 | 0.810157 | 1.33E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene53332 | 0.826657 | 2.41E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene55048 | 0.800551 | 1.37E-48 | -1.69E-46 |
| MS.gene055564 | MS.gene55270 | 0.828543 | 8.48E-55 | -1.69E-46 |
| MS.gene055564 | MS.gene56043 | 0.81155 | 6.62E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene56473 | 0.801776 | 7.67E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene56713 | 0.817501 | 3.19E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene57547 | 0.823593 | 1.27E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene58252 | 0.828067 | 1.10E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene58308 | 0.811596 | 6.47E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene58480 | 0.826126 | 3.22E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene58499 | 0.824937 | 6.16E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene58500 | 0.820329 | 7.27E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene58501 | 0.817787 | 2.75E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene60558 | 0.80183 | 7.48E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene60813 | 0.810171 | 1.32E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene60918 | 0.818068 | 2.38E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene61507 | 0.825819 | 3.81E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene62293 | 0.818973 | 1.48E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene63009 | 0.806251 | 9.01E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene63820 | 0.819146 | 1.35E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene65665 | 0.818624 | 1.78E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene66157 | 0.800931 | 1.14E-48 | -1.69E-46 |
| MS.gene055564 | MS.gene68122 | 0.813225 | 2.85E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene68242 | 0.810075 | 1.38E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene68677 | 0.823177 | 1.59E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene68723 | 0.825258 | 5.17E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene69798 | 0.807764 | 4.31E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene70467 | 0.811315 | 7.44E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene71558 | 0.843803 | 1.12E-58 | -1.69E-46 |
| MS.gene055564 | MS.gene71948 | 0.809431 | 1.90E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene77302 | 0.807801 | 4.23E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene77731 | 0.80254 | 5.35E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene78200 | 0.852903 | 3.40E-61 | -1.69E-46 |
| MS.gene055564 | MS.gene79179 | 0.83313 | 6.36E-56 | -1.69E-46 |
| MS.gene055564 | MS.gene79722 | 0.812031 | 5.20E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene80140 | 0.827246 | 1.74E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene81435 | 0.814326 | 1.63E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene81436 | 0.802082 | 6.64E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene81523 | 0.810311 | 1.23E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene82769 | 0.846291 | 2.38E-59 | -1.69E-46 |
| MS.gene055564 | MS.gene83703 | 0.821309 | 4.32E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene84344 | 0.842037 | 3.30E-58 | -1.69E-46 |
| MS.gene055564 | MS.gene84406 | 0.810283 | 1.24E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene86216 | 0.809735 | 1.63E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene86314 | 0.803857 | 2.85E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene87268 | 0.835929 | 1.26E-56 | -1.69E-46 |
| MS.gene055564 | MS.gene87906 | 0.807231 | 5.59E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene88173 | 0.806729 | 7.14E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene88199 | 0.819446 | 1.16E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene88520 | 0.834554 | 2.80E-56 | -1.69E-46 |
| MS.gene055564 | MS.gene89914 | 0.819793 | 9.64E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene90444 | 0.800618 | 1.32E-48 | -1.69E-46 |
| MS.gene055564 | MS.gene90704 | 0.8281 | 1.08E-54 | -1.69E-46 |
| MS.gene055564 | MS.gene90772 | 0.809405 | 1.92E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene91483 | 0.806733 | 7.13E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene91509 | 0.803851 | 2.86E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene91576 | 0.814597 | 1.42E-51 | -1.69E-46 |
| MS.gene055564 | MS.gene92401 | 0.802925 | 4.45E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene92549 | 0.822559 | 2.22E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene94064 | 0.809619 | 1.73E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene94661 | 0.823598 | 1.27E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene96199 | 0.808544 | 2.94E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene98214 | 0.81783 | 2.69E-52 | -1.69E-46 |
| MS.gene055564 | MS.gene99535 | 0.838373 | 2.99E-57 | -1.69E-46 |
| MS.gene055564 | MS.gene99819 | 0.856439 | 3.21E-62 | -1.69E-46 |
| MS.gene055564 | MS.gene99854 | 0.81743 | 3.31E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055564.t1 | MTR_1g082750 | 96.000 | 425 | 15 | 1 | 1 | 425 | 1 | 423 | 0.0 | 838 |
| MS.gene055564.t1 | MTR_8g107280 | 50.633 | 395 | 194 | 1 | 31 | 425 | 65 | 458 | 2.42e-136 | 401 |
| MS.gene055564.t1 | MTR_8g107280 | 50.505 | 396 | 195 | 1 | 30 | 425 | 64 | 458 | 1.68e-135 | 401 |
| MS.gene055564.t1 | MTR_4g094205 | 48.104 | 422 | 213 | 2 | 8 | 425 | 48 | 467 | 2.29e-128 | 384 |
| MS.gene055564.t1 | MTR_2g010180 | 39.855 | 138 | 82 | 1 | 22 | 159 | 189 | 325 | 2.14e-20 | 94.0 |
| MS.gene055564.t1 | MTR_2g010180 | 39.855 | 138 | 82 | 1 | 22 | 159 | 203 | 339 | 2.23e-20 | 94.0 |
| MS.gene055564.t1 | MTR_2g010180 | 39.855 | 138 | 82 | 1 | 22 | 159 | 189 | 325 | 2.37e-20 | 94.0 |
| MS.gene055564.t1 | MTR_8g094740 | 40.940 | 149 | 87 | 1 | 29 | 177 | 203 | 350 | 3.97e-18 | 87.0 |
| MS.gene055564.t1 | MTR_8g094740 | 40.940 | 149 | 87 | 1 | 29 | 177 | 203 | 350 | 4.18e-18 | 87.0 |
| MS.gene055564.t1 | MTR_8g095600 | 30.921 | 152 | 98 | 3 | 28 | 178 | 225 | 370 | 2.32e-16 | 81.3 |
| MS.gene055564.t1 | MTR_8g095600 | 30.921 | 152 | 98 | 3 | 28 | 178 | 241 | 386 | 2.83e-16 | 81.3 |
| MS.gene055564.t1 | MTR_8g095600 | 30.921 | 152 | 98 | 3 | 28 | 178 | 225 | 370 | 3.14e-16 | 81.3 |
| MS.gene055564.t1 | MTR_8g095600 | 30.921 | 152 | 98 | 3 | 28 | 178 | 225 | 370 | 3.20e-16 | 81.3 |
| MS.gene055564.t1 | MTR_3g096980 | 36.913 | 149 | 93 | 1 | 29 | 177 | 202 | 349 | 3.42e-16 | 81.3 |
| MS.gene055564.t1 | MTR_3g048950 | 46.429 | 112 | 60 | 0 | 65 | 176 | 141 | 252 | 5.42e-15 | 77.4 |
| MS.gene055564.t1 | MTR_8g080840 | 38.655 | 119 | 67 | 2 | 65 | 178 | 140 | 257 | 2.14e-13 | 72.4 |
| MS.gene055564.t1 | MTR_8g097220 | 37.815 | 119 | 68 | 2 | 65 | 178 | 137 | 254 | 7.81e-13 | 70.5 |
| MS.gene055564.t1 | MTR_8g080870 | 38.655 | 119 | 67 | 3 | 65 | 178 | 111 | 228 | 1.16e-12 | 70.1 |
| MS.gene055564.t1 | MTR_8g080890 | 37.815 | 119 | 68 | 3 | 65 | 178 | 141 | 258 | 2.87e-12 | 68.9 |
| MS.gene055564.t1 | MTR_8g080880 | 40.000 | 110 | 60 | 3 | 74 | 178 | 149 | 257 | 6.45e-12 | 67.8 |
| MS.gene055564.t1 | MTR_4g074030 | 34.848 | 132 | 76 | 3 | 65 | 190 | 132 | 259 | 2.59e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055564.t1 | AT1G08980 | 64.762 | 420 | 144 | 3 | 4 | 419 | 2 | 421 | 0.0 | 543 |
| MS.gene055564.t1 | AT3G17970 | 50.253 | 396 | 192 | 2 | 32 | 425 | 61 | 453 | 1.86e-132 | 392 |
| MS.gene055564.t1 | AT3G17970 | 50.253 | 396 | 192 | 2 | 32 | 425 | 61 | 453 | 7.11e-132 | 392 |
| MS.gene055564.t1 | AT5G09420 | 47.406 | 424 | 217 | 3 | 6 | 424 | 44 | 466 | 2.43e-131 | 391 |
| MS.gene055564.t1 | AT5G64440 | 34.899 | 149 | 96 | 1 | 29 | 177 | 197 | 344 | 2.70e-19 | 90.9 |
| MS.gene055564.t1 | AT5G07360 | 32.895 | 152 | 95 | 3 | 28 | 178 | 267 | 412 | 2.10e-16 | 82.0 |
| MS.gene055564.t1 | AT5G07360 | 32.895 | 152 | 95 | 3 | 28 | 178 | 267 | 412 | 2.10e-16 | 82.0 |
| MS.gene055564.t1 | AT3G25660 | 45.536 | 112 | 61 | 0 | 65 | 176 | 142 | 253 | 5.67e-15 | 77.4 |
| MS.gene055564.t1 | AT5G07360 | 31.579 | 152 | 90 | 4 | 28 | 178 | 267 | 405 | 1.00e-12 | 70.5 |
Find 110 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTCAATTGTTGGAGTTTC+TGG | -0.035785 | 1.2:-60097575 | MS.gene055564:CDS |
| ACGTGAAAATTTCAGGATTT+TGG | 0.176886 | 1.2:-60097692 | MS.gene055564:intron |
| GATGAATTTGTTTGTAGTTT+AGG | 0.215401 | 1.2:+60097635 | None:intergenic |
| GATGCTCTTACTTCTCTTCT+TGG | 0.224914 | 1.2:-60098222 | MS.gene055564:CDS |
| CCAACTGCACTTAAAATCTT+TGG | 0.243366 | 1.2:+60098966 | None:intergenic |
| ATATCTGTCATTCTATAATA+AGG | 0.252585 | 1.2:-60098254 | MS.gene055564:CDS |
| TTCTACTGCTCCAACAGTTT+TGG | 0.268666 | 1.2:-60100354 | MS.gene055564:CDS |
| ATGCTCTTACTTCTCTTCTT+GGG | 0.283942 | 1.2:-60098221 | MS.gene055564:CDS |
| CATTGGAACAACTTCTGATT+TGG | 0.298136 | 1.2:+60099413 | None:intergenic |
| TCTTCTGCACAAGGATTTCT+AGG | 0.310065 | 1.2:+60099726 | None:intergenic |
| TCATGGATGAAATGGCTTAC+AGG | 0.314486 | 1.2:-60100292 | MS.gene055564:intron |
| AAGCTTGTGGATTTCTCTCT+TGG | 0.315423 | 1.2:-60099654 | MS.gene055564:intron |
| GAATTCATCTGCACCATTCC+TGG | 0.352309 | 1.2:+60097403 | None:intergenic |
| AATGCAGTCAAACCTGATTT+AGG | 0.352459 | 1.2:-60098333 | MS.gene055564:CDS |
| AAAGGGTATGTAGCTGGATT+TGG | 0.358623 | 1.2:-60100413 | MS.gene055564:CDS |
| CTCAGACTATGGAGCATTCA+TGG | 0.369401 | 1.2:-60100665 | MS.gene055564:CDS |
| CTCATGATCCCCACAGTTCC+AGG | 0.370995 | 1.2:-60097665 | MS.gene055564:CDS |
| GAAATTCCCGGACCTAAATC+AGG | 0.371160 | 1.2:+60098321 | None:intergenic |
| ACAGCCTCAGACTCAGACTA+TGG | 0.372131 | 1.2:-60100676 | MS.gene055564:CDS |
| GTACGTGAAGGCCAAAGTTC+CGG | 0.373448 | 1.2:-60098602 | MS.gene055564:CDS |
| CTACTGCAGATGGTATATTA+AGG | 0.375191 | 1.2:-60098642 | MS.gene055564:intron |
| TACGTGAAGGCCAAAGTTCC+GGG | 0.381544 | 1.2:-60098601 | MS.gene055564:CDS |
| TTTAGCCTTCTGTCAATTGT+TGG | 0.387937 | 1.2:-60097584 | MS.gene055564:CDS |
| ATGCTTCAAACCCGGAACTT+TGG | 0.405620 | 1.2:+60098591 | None:intergenic |
| CTCTGCTCTGGCAGTATAAA+CGG | 0.415014 | 1.2:-60099771 | MS.gene055564:intron |
| CTGGATTTGGAAATCCTGAT+TGG | 0.416831 | 1.2:-60100400 | MS.gene055564:CDS |
| AACGGAGAAAATATACACTA+TGG | 0.428548 | 1.2:-60099753 | MS.gene055564:CDS |
| TGATGAGTCCTTGCCCAATC+AGG | 0.432179 | 1.2:+60100386 | None:intergenic |
| AGTGAATTCAAAGGAAGATC+AGG | 0.433606 | 1.2:+60100610 | None:intergenic |
| CATCAGTTTCTCTGGTGGCC+AGG | 0.435075 | 1.2:-60097421 | MS.gene055564:CDS |
| TCTCCCTGCATCAGTTTCTC+TGG | 0.435603 | 1.2:-60097429 | MS.gene055564:CDS |
| AGATCAGGGGAAGAAGAAGT+TGG | 0.455048 | 1.2:+60100625 | None:intergenic |
| CAAATAGATTTGATGTGAAA+GGG | 0.455218 | 1.2:-60100430 | MS.gene055564:intron |
| TCAAATAGATTTGATGTGAA+AGG | 0.459463 | 1.2:-60100431 | MS.gene055564:intron |
| TGTGCAGAAGACCGAGTACC+TGG | 0.460107 | 1.2:-60099714 | MS.gene055564:CDS |
| GTATCAAAACTCTGTGCCAT+TGG | 0.464094 | 1.2:+60099396 | None:intergenic |
| TGCTCTTACTTCTCTTCTTG+GGG | 0.470760 | 1.2:-60098220 | MS.gene055564:intron |
| TATCTGTCATTCTATAATAA+GGG | 0.472049 | 1.2:-60098253 | MS.gene055564:CDS |
| TAAAACTGTCATGGATGAAA+TGG | 0.474000 | 1.2:-60100300 | MS.gene055564:CDS |
| GTCAAACCTGATTTAGGTCC+GGG | 0.474511 | 1.2:-60098327 | MS.gene055564:CDS |
| AGTGGCTCTGCTGTTGCAGT+TGG | 0.475708 | 1.2:-60099681 | MS.gene055564:CDS |
| GAGTTCCTGCATCGTATTGT+GGG | 0.480183 | 1.2:-60099470 | MS.gene055564:CDS |
| AAAATCATAGGAACTGATAC+AGG | 0.481982 | 1.2:-60099504 | MS.gene055564:intron |
| TTAAGAATAACCATGGTGAA+TGG | 0.483366 | 1.2:-60098359 | MS.gene055564:CDS |
| TGAATTCTTGCTTCACCTTG+TGG | 0.490557 | 1.2:-60097387 | MS.gene055564:CDS |
| GATACGCGTTCTGAAATTCC+CGG | 0.490711 | 1.2:+60098309 | None:intergenic |
| GTTTCTCTGGTGGCCAGGAA+TGG | 0.491029 | 1.2:-60097416 | MS.gene055564:CDS |
| CACATCTAGGATGGTTTGCT+AGG | 0.495260 | 1.2:-60098992 | MS.gene055564:intron |
| AAAGCAGTACAGAAGTTGTA+TGG | 0.496483 | 1.2:-60098825 | MS.gene055564:CDS |
| TGGATTTGGAAATCCTGATT+GGG | 0.503959 | 1.2:-60100399 | MS.gene055564:CDS |
| TGCAGTTGGTGCAAAGCTTG+TGG | 0.505836 | 1.2:-60099667 | MS.gene055564:CDS |
| TGATTGGGCAAGGACTCATC+AGG | 0.506790 | 1.2:-60100384 | MS.gene055564:CDS |
| AGTCAAACCTGATTTAGGTC+CGG | 0.508658 | 1.2:-60098328 | MS.gene055564:CDS |
| TTTGTTTGTAGTTTAGGTGG+AGG | 0.511170 | 1.2:+60097641 | None:intergenic |
| AGGTGGAGGACCTGGAACTG+TGG | 0.511646 | 1.2:+60097655 | None:intergenic |
| TGTAGTTTAGGTGGAGGACC+TGG | 0.515140 | 1.2:+60097647 | None:intergenic |
| GGTGGAGGACCTGGAACTGT+GGG | 0.520381 | 1.2:+60097656 | None:intergenic |
| AGATGCCCTACGCACAACTA+AGG | 0.521800 | 1.2:-60098286 | MS.gene055564:CDS |
| GCCACCAGAGAAACTGATGC+AGG | 0.523962 | 1.2:+60097425 | None:intergenic |
| GAATTTGTTTGTAGTTTAGG+TGG | 0.526766 | 1.2:+60097638 | None:intergenic |
| CTCAGGACAGCCAAAACTGT+TGG | 0.528096 | 1.2:+60100344 | None:intergenic |
| ACAAACAAATTCATCTGACT+TGG | 0.528877 | 1.2:-60097627 | MS.gene055564:CDS |
| ATATTAAGGCATGAAATCCT+TGG | 0.530229 | 1.2:-60098628 | MS.gene055564:CDS |
| GATGTGAAAGGGTATGTAGC+TGG | 0.535739 | 1.2:-60100419 | MS.gene055564:CDS |
| GTGATGGAATGTTGTATACT+TGG | 0.541760 | 1.2:+60098545 | None:intergenic |
| TTACATGTCTTTGACTGCAA+AGG | 0.544281 | 1.2:+60100585 | None:intergenic |
| CTAGAAAGTGCAGCCAGTGA+TGG | 0.544361 | 1.2:+60098529 | None:intergenic |
| ATTCTCCTTAGTTGTGCGTA+GGG | 0.546977 | 1.2:+60098281 | None:intergenic |
| TTGGAGATTCTGCCATGAGA+AGG | 0.548028 | 1.2:+60099432 | None:intergenic |
| TATTCTCCTTAGTTGTGCGT+AGG | 0.550707 | 1.2:+60098280 | None:intergenic |
| GTGCCATGCGATTGCTTCAG+AGG | 0.554166 | 1.2:-60098507 | MS.gene055564:intron |
| CCCTGCATCAGTTTCTCTGG+TGG | 0.555780 | 1.2:-60097426 | MS.gene055564:CDS |
| CAAATCAGAAGTTGTTCCAA+TGG | 0.559736 | 1.2:-60099412 | MS.gene055564:CDS |
| TTGGAAATCCTGATTGGGCA+AGG | 0.561719 | 1.2:-60100394 | MS.gene055564:CDS |
| GAGCCACTAGAAGATCCTCC+AGG | 0.564074 | 1.2:+60099696 | None:intergenic |
| AGAGTTCCTGCATCGTATTG+TGG | 0.570485 | 1.2:-60099471 | MS.gene055564:CDS |
| TAGAAGATCCTCCAGGTACT+CGG | 0.570948 | 1.2:+60099703 | None:intergenic |
| ACATCTAGGATGGTTTGCTA+GGG | 0.574798 | 1.2:-60098991 | MS.gene055564:intron |
| AGTATACAACATTCCATCAC+TGG | 0.575077 | 1.2:-60098542 | MS.gene055564:CDS |
| CTCATGAAATGCTTCAAACC+CGG | 0.575467 | 1.2:+60098583 | None:intergenic |
| TCAGGGGAAGAAGAAGTTGG+TGG | 0.576808 | 1.2:+60100628 | None:intergenic |
| AAAATCCCACAATACGATGC+AGG | 0.581206 | 1.2:+60099465 | None:intergenic |
| AGTGCAGGTGCCACTTGTGT+TGG | 0.587175 | 1.2:-60100323 | MS.gene055564:CDS |
| ATTCGTGAAACTACATCGAA+AGG | 0.587732 | 1.2:+60098855 | None:intergenic |
| TACTCAGATTATCATTGCAG+AGG | 0.595678 | 1.2:-60098901 | MS.gene055564:CDS |
| CACAAGTGGCACCTGCACTC+AGG | 0.599971 | 1.2:+60100327 | None:intergenic |
| TTGCAGGTAAGCATACCACT+AGG | 0.600924 | 1.2:-60097464 | MS.gene055564:intron |
| TTGTGTTGGTAAAACTGTCA+TGG | 0.611411 | 1.2:-60100309 | MS.gene055564:CDS |
| GTGAATTCAAAGGAAGATCA+GGG | 0.611924 | 1.2:+60100611 | None:intergenic |
| TGCTCCATAGTCTGAGTCTG+AGG | 0.614634 | 1.2:+60100672 | None:intergenic |
| GGTACTCGGTCTTCTGCACA+AGG | 0.622489 | 1.2:+60099717 | None:intergenic |
| GTACCTGGAGGATCTTCTAG+TGG | 0.622763 | 1.2:-60099699 | MS.gene055564:CDS |
| TCTGCAATGATAATCTGAGT+AGG | 0.625913 | 1.2:+60098903 | None:intergenic |
| CTGCATTGATCCATTCACCA+TGG | 0.629877 | 1.2:+60098349 | None:intergenic |
| CCACCAGAGAAACTGATGCA+GGG | 0.640553 | 1.2:+60097426 | None:intergenic |
| TATGAATTTAAGAATAACCA+TGG | 0.640782 | 1.2:-60098366 | MS.gene055564:CDS |
| AAACTCCAACAATTGACAGA+AGG | 0.641345 | 1.2:+60097579 | None:intergenic |
| GCAAAGGTGAGTGAATTCAA+AGG | 0.643640 | 1.2:+60100601 | None:intergenic |
| ATCATAGGAACTGATACAGG+AGG | 0.652771 | 1.2:-60099501 | MS.gene055564:intron |
| ATACCTCTGAAGCAATCGCA+TGG | 0.654077 | 1.2:+60098504 | None:intergenic |
| TGCAGGTAAGCATACCACTA+GGG | 0.654224 | 1.2:-60097463 | MS.gene055564:intron |
| TGGCCTTCACGTACTCACCA+AGG | 0.657061 | 1.2:+60098611 | None:intergenic |
| AATCCTTGGTGAGTACGTGA+AGG | 0.677095 | 1.2:-60098614 | MS.gene055564:CDS |
| GCAGTACAGAAGTTGTATGG+AGG | 0.682525 | 1.2:-60098822 | MS.gene055564:intron |
| GTGGAGGACCTGGAACTGTG+GGG | 0.688610 | 1.2:+60097657 | None:intergenic |
| GGTCTAATGTGTGTGATGCG+TGG | 0.691925 | 1.2:+60098924 | None:intergenic |
| AGATCATTATACATCCCTAG+TGG | 0.705039 | 1.2:+60097449 | None:intergenic |
| TGAATTCAAAGGAAGATCAG+GGG | 0.705048 | 1.2:+60100612 | None:intergenic |
| TATCATAAATACTCTCCACA+AGG | 0.718171 | 1.2:+60097372 | None:intergenic |
| GCAGAAGACCGAGTACCTGG+AGG | 0.734688 | 1.2:-60099711 | MS.gene055564:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTTAAATAATGAAGAAAT+AGG | + | chr1.2:60100536-60100555 | None:intergenic | 15.0% |
| !!! | ATATGTAGGAATATTTTATT+AGG | - | chr1.2:60098154-60098173 | MS.gene055564:intron | 15.0% |
| !!! | ATTTAAAGTAAAATGAATGA+TGG | - | chr1.2:60097878-60097897 | MS.gene055564:intron | 15.0% |
| !!! | TATAATTTTTATCGTGAAAA+TGG | + | chr1.2:60100211-60100230 | None:intergenic | 15.0% |
| !!! | TCTATTAAATCTCTTTTTTT+GGG | - | chr1.2:60098696-60098715 | MS.gene055564:intron | 15.0% |
| !!! | TTAGTTTTTGTTAAAATCAT+AGG | - | chr1.2:60098524-60098543 | MS.gene055564:CDS | 15.0% |
| !! | AAAAAAATACAACTACTCTT+AGG | + | chr1.2:60098191-60098210 | None:intergenic | 20.0% |
| !! | AAGGACTTAAATTTAACTAA+AGG | + | chr1.2:60099628-60099647 | None:intergenic | 20.0% |
| !! | AATATCAATCTAGAGAATAA+GGG | + | chr1.2:60099014-60099033 | None:intergenic | 20.0% |
| !! | ATATCTGTCATTCTATAATA+AGG | - | chr1.2:60099786-60099805 | MS.gene055564:intron | 20.0% |
| !! | CACAAATAGTAAAAAAATCA+AGG | + | chr1.2:60099647-60099666 | None:intergenic | 20.0% |
| !! | TATAACTTTCTTAAGATTCT+CGG | - | chr1.2:60097486-60097505 | MS.gene055564:intron | 20.0% |
| !! | TATCTGTCATTCTATAATAA+GGG | - | chr1.2:60099787-60099806 | MS.gene055564:intron | 20.0% |
| !! | TATGAATTTAAGAATAACCA+TGG | - | chr1.2:60099674-60099693 | MS.gene055564:CDS | 20.0% |
| !! | TTACTTATAAGCTTATATGT+AGG | - | chr1.2:60098140-60098159 | MS.gene055564:intron | 20.0% |
| !!! | CTCTATTAAATCTCTTTTTT+TGG | - | chr1.2:60098695-60098714 | MS.gene055564:intron | 20.0% |
| !!! | TAAGAGTAGTTGTATTTTTT+TGG | - | chr1.2:60098190-60098209 | MS.gene055564:intron | 20.0% |
| !!! | TATGTTTTTCCTTTAAATGT+AGG | - | chr1.2:60098470-60098489 | MS.gene055564:intron | 20.0% |
| !!! | TTTTTTACTATTTGTGACAT+AGG | - | chr1.2:60099651-60099670 | MS.gene055564:intron | 20.0% |
| ! | AACTTTGAATCTTATCACAA+GGG | - | chr1.2:60098093-60098112 | MS.gene055564:intron | 25.0% |
| ! | ACTAAAGATTATTAATCCCA+TGG | + | chr1.2:60098509-60098528 | None:intergenic | 25.0% |
| ! | ATACATGTCAAACATCATTA+TGG | + | chr1.2:60099335-60099354 | None:intergenic | 25.0% |
| ! | ATTCTACATATGAAGATTGT+AGG | - | chr1.2:60100158-60100177 | MS.gene055564:intron | 25.0% |
| ! | CAAATAGATTTGATGTGAAA+GGG | - | chr1.2:60097610-60097629 | MS.gene055564:CDS | 25.0% |
| ! | GAATATCAATCTAGAGAATA+AGG | + | chr1.2:60099015-60099034 | None:intergenic | 25.0% |
| ! | TAACTTTGAATCTTATCACA+AGG | - | chr1.2:60098092-60098111 | MS.gene055564:intron | 25.0% |
| ! | TCAAATAGATTTGATGTGAA+AGG | - | chr1.2:60097609-60097628 | MS.gene055564:CDS | 25.0% |
| ! | TGAAATATGAGTAAACTTTG+AGG | + | chr1.2:60097529-60097548 | None:intergenic | 25.0% |
| ! | TGATAGATACCAAAAACAAA+AGG | + | chr1.2:60100114-60100133 | None:intergenic | 25.0% |
| ! | TTATCTTCATACTACTTATG+AGG | - | chr1.2:60100280-60100299 | MS.gene055564:intron | 25.0% |
| !! | GATGAATTTGTTTGTAGTTT+AGG | + | chr1.2:60100408-60100427 | None:intergenic | 25.0% |
| !! | TATCTAAAACTGATGTCATT+AGG | + | chr1.2:60098836-60098855 | None:intergenic | 25.0% |
| !! | TTTTATTCTTCAAGTGATTG+TGG | - | chr1.2:60099596-60099615 | MS.gene055564:intron | 25.0% |
| !!! | AGATTAGATACAGTTTTTAG+TGG | + | chr1.2:60098046-60098065 | None:intergenic | 25.0% |
| !!! | AGTTGTATTTTTTTGGTGTT+GGG | - | chr1.2:60098197-60098216 | MS.gene055564:intron | 25.0% |
| !!! | GAAGATAACTTTTTGAAAGA+AGG | + | chr1.2:60100268-60100287 | None:intergenic | 25.0% |
| !!! | GCTTTATTTTTCAGTTTCTA+AGG | - | chr1.2:60097832-60097851 | MS.gene055564:intron | 25.0% |
| !!! | TAGTTGTATTTTTTTGGTGT+TGG | - | chr1.2:60098196-60098215 | MS.gene055564:intron | 25.0% |
| AAAATCATAGGAACTGATAC+AGG | - | chr1.2:60098536-60098555 | MS.gene055564:CDS | 30.0% | |
| AACGGAGAAAATATACACTA+TGG | - | chr1.2:60098287-60098306 | MS.gene055564:CDS | 30.0% | |
| AAGAAGTAGGTTATGTTGAA+AGG | - | chr1.2:60097982-60098001 | MS.gene055564:intron | 30.0% | |
| ACAAACAAATTCATCTGACT+TGG | - | chr1.2:60100413-60100432 | MS.gene055564:CDS | 30.0% | |
| ACAGTTTACGTGAAAATTTC+AGG | - | chr1.2:60100341-60100360 | MS.gene055564:CDS | 30.0% | |
| ATATTAAGGCATGAAATCCT+TGG | - | chr1.2:60099412-60099431 | MS.gene055564:CDS | 30.0% | |
| ATGTAACATATCATTGCTCT+TGG | - | chr1.2:60099932-60099951 | MS.gene055564:intron | 30.0% | |
| CTTGTTTGTCTAAATCAAGT+TGG | - | chr1.2:60097935-60097954 | MS.gene055564:intron | 30.0% | |
| GATACCAAAAACAAAAGGTA+TGG | + | chr1.2:60100109-60100128 | None:intergenic | 30.0% | |
| GATTGAATAAAGAATCTCTC+AGG | + | chr1.2:60098912-60098931 | None:intergenic | 30.0% | |
| GCTCAAAACAACTAATGAAA+TGG | + | chr1.2:60098424-60098443 | None:intergenic | 30.0% | |
| TAAAACTGTCATGGATGAAA+TGG | - | chr1.2:60097740-60097759 | MS.gene055564:intron | 30.0% | |
| TATCATAAATACTCTCCACA+AGG | + | chr1.2:60100671-60100690 | None:intergenic | 30.0% | |
| TCCATCAAGTTCAATATACA+TGG | + | chr1.2:60097571-60097590 | None:intergenic | 30.0% | |
| TCCATGTATATTGAACTTGA+TGG | - | chr1.2:60097567-60097586 | MS.gene055564:CDS | 30.0% | |
| TTAAGAATAACCATGGTGAA+TGG | - | chr1.2:60099681-60099700 | MS.gene055564:CDS | 30.0% | |
| TTATTCGCATATTCACATCT+AGG | - | chr1.2:60099035-60099054 | MS.gene055564:intron | 30.0% | |
| ! | AATGAGTTGAAGACAAAGAA+TGG | + | chr1.2:60100318-60100337 | None:intergenic | 30.0% |
| ! | ACGTGAAAATTTCAGGATTT+TGG | - | chr1.2:60100348-60100367 | MS.gene055564:CDS | 30.0% |
| ! | GAATTTGTTTGTAGTTTAGG+TGG | + | chr1.2:60100405-60100424 | None:intergenic | 30.0% |
| !! | ATTCATTGTTCTAGAGGATA+TGG | - | chr1.2:60098722-60098741 | MS.gene055564:intron | 30.0% |
| !! | GAAGAGTATCCTACATTTAA+AGG | + | chr1.2:60098482-60098501 | None:intergenic | 30.0% |
| !! | TTGGTAATAATCCGCAATTT+TGG | - | chr1.2:60098669-60098688 | MS.gene055564:intron | 30.0% |
| !!! | CAGTTTTAGATATTCTCTTG+AGG | - | chr1.2:60098844-60098863 | MS.gene055564:CDS | 30.0% |
| !!! | TACACCATACCTTTTGTTTT+TGG | - | chr1.2:60100102-60100121 | MS.gene055564:intron | 30.0% |
| !!! | TTTTTTTCTCAACACTTTGC+AGG | - | chr1.2:60100560-60100579 | MS.gene055564:intron | 30.0% |
| AAACTCCAACAATTGACAGA+AGG | + | chr1.2:60100464-60100483 | None:intergenic | 35.0% | |
| AAAGCAGTACAGAAGTTGTA+TGG | - | chr1.2:60099215-60099234 | MS.gene055564:intron | 35.0% | |
| AAGTCATCTTTGCTGAAGTT+AGG | + | chr1.2:60099578-60099597 | None:intergenic | 35.0% | |
| AATGCAGTCAAACCTGATTT+AGG | - | chr1.2:60099707-60099726 | MS.gene055564:CDS | 35.0% | |
| AGATCATTATACATCCCTAG+TGG | + | chr1.2:60100594-60100613 | None:intergenic | 35.0% | |
| AGTATACAACATTCCATCAC+TGG | - | chr1.2:60099498-60099517 | MS.gene055564:intron | 35.0% | |
| AGTCATCTTTGCTGAAGTTA+GGG | + | chr1.2:60099577-60099596 | None:intergenic | 35.0% | |
| AGTGAATTCAAAGGAAGATC+AGG | + | chr1.2:60097433-60097452 | None:intergenic | 35.0% | |
| ATGCTCTTACTTCTCTTCTT+GGG | - | chr1.2:60099819-60099838 | MS.gene055564:intron | 35.0% | |
| ATTCGTGAAACTACATCGAA+AGG | + | chr1.2:60099188-60099207 | None:intergenic | 35.0% | |
| CAAATCAGAAGTTGTTCCAA+TGG | - | chr1.2:60098628-60098647 | MS.gene055564:CDS | 35.0% | |
| CATTGGAACAACTTCTGATT+TGG | + | chr1.2:60098630-60098649 | None:intergenic | 35.0% | |
| CCAACTGCACTTAAAATCTT+TGG | + | chr1.2:60099077-60099096 | None:intergenic | 35.0% | |
| CTAATTCTCACTGAAGAAGT+AGG | - | chr1.2:60097969-60097988 | MS.gene055564:intron | 35.0% | |
| CTACTGCAGATGGTATATTA+AGG | - | chr1.2:60099398-60099417 | MS.gene055564:CDS | 35.0% | |
| GTGAATTCAAAGGAAGATCA+GGG | + | chr1.2:60097432-60097451 | None:intergenic | 35.0% | |
| TAATAGAGCCACCAAAATTG+CGG | + | chr1.2:60098683-60098702 | None:intergenic | 35.0% | |
| TACTCAGATTATCATTGCAG+AGG | - | chr1.2:60099139-60099158 | MS.gene055564:intron | 35.0% | |
| TCGTGAAAATGGTTGCATAA+AGG | + | chr1.2:60100200-60100219 | None:intergenic | 35.0% | |
| TCTGCAATGATAATCTGAGT+AGG | + | chr1.2:60099140-60099159 | None:intergenic | 35.0% | |
| TCTTCTGATTATTAACCGAG+TGG | + | chr1.2:60098448-60098467 | None:intergenic | 35.0% | |
| TGAATGATGGTTTATGCTCA+CGG | - | chr1.2:60097891-60097910 | MS.gene055564:intron | 35.0% | |
| TGAATTCAAAGGAAGATCAG+GGG | + | chr1.2:60097431-60097450 | None:intergenic | 35.0% | |
| TGGATTTGGAAATCCTGATT+GGG | - | chr1.2:60097641-60097660 | MS.gene055564:CDS | 35.0% | |
| TTACATGTCTTTGACTGCAA+AGG | + | chr1.2:60097458-60097477 | None:intergenic | 35.0% | |
| TTTGAATCTTATCACAAGGG+TGG | - | chr1.2:60098096-60098115 | MS.gene055564:intron | 35.0% | |
| TTTGTTTGTAGTTTAGGTGG+AGG | + | chr1.2:60100402-60100421 | None:intergenic | 35.0% | |
| ! | AGGTTCAGCTTTTCTTTTGT+TGG | - | chr1.2:60097768-60097787 | MS.gene055564:intron | 35.0% |
| ! | GTAATAATCCGCAATTTTGG+TGG | - | chr1.2:60098672-60098691 | MS.gene055564:intron | 35.0% |
| ! | GTGATGGAATGTTGTATACT+TGG | + | chr1.2:60099498-60099517 | None:intergenic | 35.0% |
| ! | TTGTGAAGCTGCATTTTCAA+AGG | + | chr1.2:60098982-60099001 | None:intergenic | 35.0% |
| ! | TTGTGTTGGTAAAACTGTCA+TGG | - | chr1.2:60097731-60097750 | MS.gene055564:intron | 35.0% |
| ! | TTTAGCCTTCTGTCAATTGT+TGG | - | chr1.2:60100456-60100475 | MS.gene055564:intron | 35.0% |
| !! | CCAAAGATTTTAAGTGCAGT+TGG | - | chr1.2:60099074-60099093 | MS.gene055564:intron | 35.0% |
| !! | TATGAGTAAACTTTGAGGTC+AGG | + | chr1.2:60097524-60097543 | None:intergenic | 35.0% |
| AAAATCCCACAATACGATGC+AGG | + | chr1.2:60098578-60098597 | None:intergenic | 40.0% | |
| AAGCTTGTGGATTTCTCTCT+TGG | - | chr1.2:60098386-60098405 | MS.gene055564:intron | 40.0% | |
| AGTCAAACCTGATTTAGGTC+CGG | - | chr1.2:60099712-60099731 | MS.gene055564:CDS | 40.0% | |
| ATCATAGGAACTGATACAGG+AGG | - | chr1.2:60098539-60098558 | MS.gene055564:CDS | 40.0% | |
| ATCTTTGCTGAAGTTAGGGA+TGG | + | chr1.2:60099573-60099592 | None:intergenic | 40.0% | |
| ATTCTCCTTAGTTGTGCGTA+GGG | + | chr1.2:60099762-60099781 | None:intergenic | 40.0% | |
| CTCATGAAATGCTTCAAACC+CGG | + | chr1.2:60099460-60099479 | None:intergenic | 40.0% | |
| CTGGATTTGGAAATCCTGAT+TGG | - | chr1.2:60097640-60097659 | MS.gene055564:CDS | 40.0% | |
| CTGTCAATTGTTGGAGTTTC+TGG | - | chr1.2:60100465-60100484 | MS.gene055564:intron | 40.0% | |
| GATGCTCTTACTTCTCTTCT+TGG | - | chr1.2:60099818-60099837 | MS.gene055564:intron | 40.0% | |
| GCAAAGGTGAGTGAATTCAA+AGG | + | chr1.2:60097442-60097461 | None:intergenic | 40.0% | |
| GGGTGAATTCATTGTTCTAG+AGG | - | chr1.2:60098716-60098735 | MS.gene055564:intron | 40.0% | |
| GTAGGTTATGTTGAAAGGAC+AGG | - | chr1.2:60097987-60098006 | MS.gene055564:intron | 40.0% | |
| GTATCAAAACTCTGTGCCAT+TGG | + | chr1.2:60098647-60098666 | None:intergenic | 40.0% | |
| TATAACACAGTACTCTGCTC+TGG | - | chr1.2:60098257-60098276 | MS.gene055564:CDS | 40.0% | |
| TATTCTCCTTAGTTGTGCGT+AGG | + | chr1.2:60099763-60099782 | None:intergenic | 40.0% | |
| TCATGGATGAAATGGCTTAC+AGG | - | chr1.2:60097748-60097767 | MS.gene055564:intron | 40.0% | |
| TCGCATATTCACATCTAGGA+TGG | - | chr1.2:60099039-60099058 | MS.gene055564:intron | 40.0% | |
| TCTTCTGCACAAGGATTTCT+AGG | + | chr1.2:60098317-60098336 | None:intergenic | 40.0% | |
| TGAATTCTTGCTTCACCTTG+TGG | - | chr1.2:60100653-60100672 | MS.gene055564:CDS | 40.0% | |
| TGCTCTTACTTCTCTTCTTG+GGG | - | chr1.2:60099820-60099839 | MS.gene055564:intron | 40.0% | |
| ! | AAAGGGTATGTAGCTGGATT+TGG | - | chr1.2:60097627-60097646 | MS.gene055564:CDS | 40.0% |
| ! | ACTTGGAAATTTTTCGCGCT+AGG | - | chr1.2:60100430-60100449 | MS.gene055564:intron | 40.0% |
| ! | CTTGGAAATTTTTCGCGCTA+GGG | - | chr1.2:60100431-60100450 | MS.gene055564:intron | 40.0% |
| ! | GACAGTTTTACCAACACAAG+TGG | + | chr1.2:60097730-60097749 | None:intergenic | 40.0% |
| ! | GCATCGTATTGTGGGATTTT+CGG | - | chr1.2:60098578-60098597 | MS.gene055564:CDS | 40.0% |
| ! | TTCTACTGCTCCAACAGTTT+TGG | - | chr1.2:60097686-60097705 | MS.gene055564:intron | 40.0% |
| !! | ACATCTAGGATGGTTTGCTA+GGG | - | chr1.2:60099049-60099068 | MS.gene055564:intron | 40.0% |
| !! | GCACAGAGTTTTGATACTGT+TGG | - | chr1.2:60098650-60098669 | MS.gene055564:intron | 40.0% |
| !! | TGGAGTTTCTGGATTTTGTC+AGG | - | chr1.2:60100476-60100495 | MS.gene055564:intron | 40.0% |
| !!! | TAGTTGTTTTGAGCACCACT+CGG | - | chr1.2:60098430-60098449 | MS.gene055564:intron | 40.0% |
| AATCCTTGGTGAGTACGTGA+AGG | - | chr1.2:60099426-60099445 | MS.gene055564:CDS | 45.0% | |
| AGAGTTCCTGCATCGTATTG+TGG | - | chr1.2:60098569-60098588 | MS.gene055564:CDS | 45.0% | |
| AGATCAGGGGAAGAAGAAGT+TGG | + | chr1.2:60097418-60097437 | None:intergenic | 45.0% | |
| AGGATACTCTTCTGCTCCAT+GGG | - | chr1.2:60098490-60098509 | MS.gene055564:intron | 45.0% | |
| ATGCTTCAAACCCGGAACTT+TGG | + | chr1.2:60099452-60099471 | None:intergenic | 45.0% | |
| CTCTGCTCTGGCAGTATAAA+CGG | - | chr1.2:60098269-60098288 | MS.gene055564:CDS | 45.0% | |
| GAAATTCCCGGACCTAAATC+AGG | + | chr1.2:60099722-60099741 | None:intergenic | 45.0% | |
| GAATTCATCTGCACCATTCC+TGG | + | chr1.2:60100640-60100659 | None:intergenic | 45.0% | |
| GAGTTCCTGCATCGTATTGT+GGG | - | chr1.2:60098570-60098589 | MS.gene055564:CDS | 45.0% | |
| GCAGTACAGAAGTTGTATGG+AGG | - | chr1.2:60099218-60099237 | MS.gene055564:intron | 45.0% | |
| GCTCTATACACTACTGCAGA+TGG | - | chr1.2:60099388-60099407 | MS.gene055564:intron | 45.0% | |
| GTCAAACCTGATTTAGGTCC+GGG | - | chr1.2:60099713-60099732 | MS.gene055564:CDS | 45.0% | |
| GTTGTTACTGTGTGTGTGTG+TGG | - | chr1.2:60100498-60100517 | MS.gene055564:intron | 45.0% | |
| TAGAAGATCCTCCAGGTACT+CGG | + | chr1.2:60098340-60098359 | None:intergenic | 45.0% | |
| TAGGATACTCTTCTGCTCCA+TGG | - | chr1.2:60098489-60098508 | MS.gene055564:intron | 45.0% | |
| TGCAGGTAAGCATACCACTA+GGG | - | chr1.2:60100577-60100596 | MS.gene055564:intron | 45.0% | |
| TTGCAGGTAAGCATACCACT+AGG | - | chr1.2:60100576-60100595 | MS.gene055564:intron | 45.0% | |
| TTGGAAATCCTGATTGGGCA+AGG | - | chr1.2:60097646-60097665 | MS.gene055564:CDS | 45.0% | |
| TTGGAGATTCTGCCATGAGA+AGG | + | chr1.2:60098611-60098630 | None:intergenic | 45.0% | |
| ! | CTCAGACTATGGAGCATTCA+TGG | - | chr1.2:60097375-60097394 | MS.gene055564:CDS | 45.0% |
| ! | CTGCATTGATCCATTCACCA+TGG | + | chr1.2:60099694-60099713 | None:intergenic | 45.0% |
| ! | GATGTGAAAGGGTATGTAGC+TGG | - | chr1.2:60097621-60097640 | MS.gene055564:CDS | 45.0% |
| ! | TTCGGTTTTCGTCCTTCTCA+TGG | - | chr1.2:60098596-60098615 | MS.gene055564:CDS | 45.0% |
| !! | ATACCTCTGAAGCAATCGCA+TGG | + | chr1.2:60099539-60099558 | None:intergenic | 45.0% |
| !! | CACATCTAGGATGGTTTGCT+AGG | - | chr1.2:60099048-60099067 | MS.gene055564:intron | 45.0% |
| !! | GATACGCGTTCTGAAATTCC+CGG | + | chr1.2:60099734-60099753 | None:intergenic | 45.0% |
| ACAGCCTCAGACTCAGACTA+TGG | - | chr1.2:60097364-60097383 | MS.gene055564:CDS | 50.0% | |
| AGATGCCCTACGCACAACTA+AGG | - | chr1.2:60099754-60099773 | MS.gene055564:CDS | 50.0% | |
| CCACCAGAGAAACTGATGCA+GGG | + | chr1.2:60100617-60100636 | None:intergenic | 50.0% | |
| CTCAGGACAGCCAAAACTGT+TGG | + | chr1.2:60097699-60097718 | None:intergenic | 50.0% | |
| GGTCTAATGTGTGTGATGCG+TGG | + | chr1.2:60099119-60099138 | None:intergenic | 50.0% | |
| GTACCTGGAGGATCTTCTAG+TGG | - | chr1.2:60098341-60098360 | MS.gene055564:CDS | 50.0% | |
| GTACGTGAAGGCCAAAGTTC+CGG | - | chr1.2:60099438-60099457 | MS.gene055564:CDS | 50.0% | |
| TACGTGAAGGCCAAAGTTCC+GGG | - | chr1.2:60099439-60099458 | MS.gene055564:CDS | 50.0% | |
| TCAGGGGAAGAAGAAGTTGG+TGG | + | chr1.2:60097415-60097434 | None:intergenic | 50.0% | |
| TCTCCCTGCATCAGTTTCTC+TGG | - | chr1.2:60100611-60100630 | MS.gene055564:CDS | 50.0% | |
| TGATGAGTCCTTGCCCAATC+AGG | + | chr1.2:60097657-60097676 | None:intergenic | 50.0% | |
| TGATTGGGCAAGGACTCATC+AGG | - | chr1.2:60097656-60097675 | MS.gene055564:CDS | 50.0% | |
| TGCTCCATAGTCTGAGTCTG+AGG | + | chr1.2:60097371-60097390 | None:intergenic | 50.0% | |
| TGTAGTTTAGGTGGAGGACC+TGG | + | chr1.2:60100396-60100415 | None:intergenic | 50.0% | |
| ! | CTAGAAAGTGCAGCCAGTGA+TGG | + | chr1.2:60099514-60099533 | None:intergenic | 50.0% |
| ! | TGCAGTTGGTGCAAAGCTTG+TGG | - | chr1.2:60098373-60098392 | MS.gene055564:intron | 50.0% |
| CATCAGTTTCTCTGGTGGCC+AGG | - | chr1.2:60100619-60100638 | MS.gene055564:CDS | 55.0% | |
| CCCTGCATCAGTTTCTCTGG+TGG | - | chr1.2:60100614-60100633 | MS.gene055564:CDS | 55.0% | |
| CTCATGATCCCCACAGTTCC+AGG | - | chr1.2:60100375-60100394 | MS.gene055564:CDS | 55.0% | |
| GAGCCACTAGAAGATCCTCC+AGG | + | chr1.2:60098347-60098366 | None:intergenic | 55.0% | |
| GCCACCAGAGAAACTGATGC+AGG | + | chr1.2:60100618-60100637 | None:intergenic | 55.0% | |
| GGTACTCGGTCTTCTGCACA+AGG | + | chr1.2:60098326-60098345 | None:intergenic | 55.0% | |
| GTGCCATGCGATTGCTTCAG+AGG | - | chr1.2:60099533-60099552 | MS.gene055564:intron | 55.0% | |
| GTTTCTCTGGTGGCCAGGAA+TGG | - | chr1.2:60100624-60100643 | MS.gene055564:CDS | 55.0% | |
| TGGCCTTCACGTACTCACCA+AGG | + | chr1.2:60099432-60099451 | None:intergenic | 55.0% | |
| TGTGCAGAAGACCGAGTACC+TGG | - | chr1.2:60098326-60098345 | MS.gene055564:CDS | 55.0% | |
| ! | AGTGGCTCTGCTGTTGCAGT+TGG | - | chr1.2:60098359-60098378 | MS.gene055564:CDS | 55.0% |
| !! | AGTGCAGGTGCCACTTGTGT+TGG | - | chr1.2:60097717-60097736 | MS.gene055564:intron | 55.0% |
| !!! | GTTTTGGCTGTCCTGAGTGC+AGG | - | chr1.2:60097702-60097721 | MS.gene055564:intron | 55.0% |
| AGGTGGAGGACCTGGAACTG+TGG | + | chr1.2:60100388-60100407 | None:intergenic | 60.0% | |
| CACAAGTGGCACCTGCACTC+AGG | + | chr1.2:60097716-60097735 | None:intergenic | 60.0% | |
| GCAGAAGACCGAGTACCTGG+AGG | - | chr1.2:60098329-60098348 | MS.gene055564:CDS | 60.0% | |
| GGTGGAGGACCTGGAACTGT+GGG | + | chr1.2:60100387-60100406 | None:intergenic | 60.0% | |
| GTGGAGGACCTGGAACTGTG+GGG | + | chr1.2:60100386-60100405 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 60097358 | 60100704 | 60097358 | ID=MS.gene055564 |
| chr1.2 | mRNA | 60097358 | 60100704 | 60097358 | ID=MS.gene055564.t1;Parent=MS.gene055564 |
| chr1.2 | exon | 60100589 | 60100704 | 60100589 | ID=MS.gene055564.t1.exon1;Parent=MS.gene055564.t1 |
| chr1.2 | CDS | 60100589 | 60100704 | 60100589 | ID=cds.MS.gene055564.t1;Parent=MS.gene055564.t1 |
| chr1.2 | exon | 60100293 | 60100445 | 60100293 | ID=MS.gene055564.t1.exon2;Parent=MS.gene055564.t1 |
| chr1.2 | CDS | 60100293 | 60100445 | 60100293 | ID=cds.MS.gene055564.t1;Parent=MS.gene055564.t1 |
| chr1.2 | exon | 60099655 | 60099779 | 60099655 | ID=MS.gene055564.t1.exon3;Parent=MS.gene055564.t1 |
| chr1.2 | CDS | 60099655 | 60099779 | 60099655 | ID=cds.MS.gene055564.t1;Parent=MS.gene055564.t1 |
| chr1.2 | exon | 60099391 | 60099516 | 60099391 | ID=MS.gene055564.t1.exon4;Parent=MS.gene055564.t1 |
| chr1.2 | CDS | 60099391 | 60099516 | 60099391 | ID=cds.MS.gene055564.t1;Parent=MS.gene055564.t1 |
| chr1.2 | exon | 60098823 | 60099005 | 60098823 | ID=MS.gene055564.t1.exon5;Parent=MS.gene055564.t1 |
| chr1.2 | CDS | 60098823 | 60099005 | 60098823 | ID=cds.MS.gene055564.t1;Parent=MS.gene055564.t1 |
| chr1.2 | exon | 60098508 | 60098655 | 60098508 | ID=MS.gene055564.t1.exon6;Parent=MS.gene055564.t1 |
| chr1.2 | CDS | 60098508 | 60098655 | 60098508 | ID=cds.MS.gene055564.t1;Parent=MS.gene055564.t1 |
| chr1.2 | exon | 60098221 | 60098389 | 60098221 | ID=MS.gene055564.t1.exon7;Parent=MS.gene055564.t1 |
| chr1.2 | CDS | 60098221 | 60098389 | 60098221 | ID=cds.MS.gene055564.t1;Parent=MS.gene055564.t1 |
| chr1.2 | exon | 60097565 | 60097699 | 60097565 | ID=MS.gene055564.t1.exon8;Parent=MS.gene055564.t1 |
| chr1.2 | CDS | 60097565 | 60097699 | 60097565 | ID=cds.MS.gene055564.t1;Parent=MS.gene055564.t1 |
| chr1.2 | exon | 60097358 | 60097480 | 60097358 | ID=MS.gene055564.t1.exon9;Parent=MS.gene055564.t1 |
| chr1.2 | CDS | 60097358 | 60097480 | 60097358 | ID=cds.MS.gene055564.t1;Parent=MS.gene055564.t1 |
| Gene Sequence |
| Protein sequence |
