Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44131.t1 | XP_003591150.1 | 98.8 | 168 | 2 | 0 | 1 | 168 | 1 | 168 | 4.10E-88 | 334 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44131.t1 | Q5J907 | 91.1 | 168 | 15 | 0 | 1 | 168 | 1 | 168 | 1.2e-83 | 310.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44131.t1 | G7I8Q1 | 98.8 | 168 | 2 | 0 | 1 | 168 | 1 | 168 | 3.0e-88 | 334.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049419 | MS.gene44131 | -0.821606 | 3.69E-53 | -1.69E-46 |
| MS.gene049669 | MS.gene44131 | 0.81698 | 4.18E-52 | -1.69E-46 |
| MS.gene050105 | MS.gene44131 | 0.80187 | 7.34E-49 | -1.69E-46 |
| MS.gene051368 | MS.gene44131 | 0.808662 | 2.77E-50 | -1.69E-46 |
| MS.gene051924 | MS.gene44131 | -0.800059 | 1.72E-48 | -1.69E-46 |
| MS.gene051926 | MS.gene44131 | -0.819623 | 1.05E-52 | -1.69E-46 |
| MS.gene052586 | MS.gene44131 | 0.83006 | 3.63E-55 | -1.69E-46 |
| MS.gene052965 | MS.gene44131 | -0.807028 | 6.17E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene44131 | 0.81597 | 7.04E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene44131 | 0.806251 | 9.01E-50 | -1.69E-46 |
| MS.gene055841 | MS.gene44131 | 0.801067 | 1.07E-48 | -1.69E-46 |
| MS.gene056064 | MS.gene44131 | 0.89683 | 2.53E-76 | -1.69E-46 |
| MS.gene056068 | MS.gene44131 | 0.838611 | 2.59E-57 | -1.69E-46 |
| MS.gene056480 | MS.gene44131 | 0.820369 | 7.11E-53 | -1.69E-46 |
| MS.gene057156 | MS.gene44131 | -0.847775 | 9.34E-60 | -1.69E-46 |
| MS.gene057208 | MS.gene44131 | 0.81786 | 2.65E-52 | -1.69E-46 |
| MS.gene059438 | MS.gene44131 | 0.804001 | 2.66E-49 | -1.69E-46 |
| MS.gene059440 | MS.gene44131 | 0.822184 | 2.71E-53 | -1.69E-46 |
| MS.gene059952 | MS.gene44131 | 0.825101 | 5.63E-54 | -1.69E-46 |
| MS.gene060851 | MS.gene44131 | 0.802214 | 6.24E-49 | -1.69E-46 |
| MS.gene060879 | MS.gene44131 | 0.848938 | 4.45E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44131.t1 | MTR_1g083380 | 98.810 | 168 | 2 | 0 | 1 | 168 | 1 | 168 | 2.09e-120 | 337 |
| MS.gene44131.t1 | MTR_1g083350 | 98.214 | 168 | 3 | 0 | 1 | 168 | 1 | 168 | 1.74e-119 | 334 |
| MS.gene44131.t1 | MTR_2g436620 | 86.310 | 168 | 22 | 1 | 1 | 168 | 1 | 167 | 9.72e-103 | 292 |
| MS.gene44131.t1 | MTR_1g083340 | 91.083 | 157 | 4 | 1 | 1 | 147 | 1 | 157 | 6.42e-98 | 280 |
| MS.gene44131.t1 | MTR_6g071090 | 81.366 | 161 | 29 | 1 | 1 | 161 | 1 | 160 | 3.31e-90 | 260 |
| MS.gene44131.t1 | MTR_2g436620 | 85.211 | 142 | 20 | 1 | 27 | 168 | 1 | 141 | 2.61e-84 | 244 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44131.t1 | AT3G16640 | 78.571 | 168 | 36 | 0 | 1 | 168 | 1 | 168 | 4.91e-96 | 275 |
| MS.gene44131.t1 | AT3G05540 | 79.882 | 169 | 32 | 2 | 1 | 168 | 1 | 168 | 1.60e-89 | 259 |
Find 43 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATTGTTGACACTTTC+AGG | 0.110440 | 1.3:-58927236 | MS.gene44131:CDS |
| AATTGTAGGTCCTTGAGTTT+AGG | 0.253357 | 1.3:+58927072 | None:intergenic |
| TCCATTCTCAATTTCCTTGC+AGG | 0.264878 | 1.3:+58927502 | None:intergenic |
| ATTGTAGGTCCTTGAGTTTA+GGG | 0.271566 | 1.3:+58927073 | None:intergenic |
| GTATACCAGGATCTTCTTAC+AGG | 0.300413 | 1.3:-58928389 | MS.gene44131:intron |
| TGTTGACACTTTCAGGCTTC+AGG | 0.310211 | 1.3:-58927229 | MS.gene44131:CDS |
| GTTGCTGACATCTAAATTAG+AGG | 0.319278 | 1.3:-58927151 | MS.gene44131:CDS |
| CTACTTTGCCTATGGCTTGA+AGG | 0.378916 | 1.3:-58926664 | MS.gene44131:CDS |
| AACAATATCAACCACTTTGA+CGG | 0.381711 | 1.3:+58927248 | None:intergenic |
| GATGAAATACATACAATTGT+AGG | 0.387035 | 1.3:+58927058 | None:intergenic |
| AATTGCTTCTTATCAAAAGC+TGG | 0.428621 | 1.3:+58927201 | None:intergenic |
| CCTTGTGTTTGCTTACTACA+AGG | 0.455642 | 1.3:-58926712 | MS.gene44131:CDS |
| GAATGGAATGTTGTGGGAAG+TGG | 0.459626 | 1.3:-58927486 | MS.gene44131:CDS |
| CCATTCTCAATTTCCTTGCA+GGG | 0.465811 | 1.3:+58927503 | None:intergenic |
| TAGGCAAAGTAGAGAAAAGT+TGG | 0.474181 | 1.3:+58926675 | None:intergenic |
| TCGTCTCCACCCTCTGCAGA+AGG | 0.482179 | 1.3:+58927294 | None:intergenic |
| TATTTGCAGTGGGTTGTTCA+AGG | 0.483236 | 1.3:-58927345 | MS.gene44131:intron |
| CCCTGCAAGGAAATTGAGAA+TGG | 0.490398 | 1.3:-58927503 | MS.gene44131:CDS |
| CTTGATTTCCTTCAAGCCAT+AGG | 0.498561 | 1.3:+58926656 | None:intergenic |
| GGAGCAGTGGATGTGAATAT+TGG | 0.501116 | 1.3:-58927324 | MS.gene44131:CDS |
| TGCAACCATGCTTGTATACC+AGG | 0.506466 | 1.3:-58928402 | None:intergenic |
| GGTGCTAACCCTTCTGCAGA+GGG | 0.509467 | 1.3:-58927303 | MS.gene44131:CDS |
| CTCTGACTCATTCCCCTGCA+AGG | 0.534349 | 1.3:-58927516 | MS.gene44131:CDS |
| GTGTTTGCTTACTACAAGGA+TGG | 0.538874 | 1.3:-58926708 | MS.gene44131:CDS |
| GGTCCTTGAGTTTAGGGAGA+AGG | 0.545288 | 1.3:+58927079 | None:intergenic |
| GTTCCTTCTCCCTAAACTCA+AGG | 0.563294 | 1.3:-58927082 | MS.gene44131:CDS |
| GGGGAGAGCATGCATGATGA+TGG | 0.565967 | 1.3:-58926738 | MS.gene44131:CDS |
| CATTCTCAATTTCCTTGCAG+GGG | 0.578074 | 1.3:+58927504 | None:intergenic |
| CGTCTCCACCCTCTGCAGAA+GGG | 0.579433 | 1.3:+58927295 | None:intergenic |
| ATTTACCTGTAAGAAGATCC+TGG | 0.582754 | 1.3:+58928384 | None:intergenic |
| GTTGTGGGAAGTGGAAGGAA+AGG | 0.585239 | 1.3:-58927477 | MS.gene44131:intron |
| AATTGAGAATGGAATGTTGT+GGG | 0.593952 | 1.3:-58927492 | MS.gene44131:CDS |
| TTCTGCAGAGGGTGGAGACG+AGG | 0.598044 | 1.3:-58927292 | MS.gene44131:CDS |
| GCTAACCCTTCTGCAGAGGG+TGG | 0.604009 | 1.3:-58927300 | MS.gene44131:CDS |
| GTAGAGAAAAGTTGGATCAG+TGG | 0.605758 | 1.3:+58926683 | None:intergenic |
| GAGGGTGGAGACGAGGATGA+CGG | 0.612656 | 1.3:-58927285 | MS.gene44131:CDS |
| AAGATCCTGGTATACAAGCA+TGG | 0.618624 | 1.3:+58928397 | None:intergenic |
| TGGTGCTAACCCTTCTGCAG+AGG | 0.618744 | 1.3:-58927304 | MS.gene44131:CDS |
| CCTTGTAGTAAGCAAACACA+AGG | 0.635355 | 1.3:+58926712 | None:intergenic |
| GTGGGTTGTTCAAGGAGCAG+TGG | 0.636439 | 1.3:-58927337 | MS.gene44131:CDS |
| GGAATGTTGTGGGAAGTGGA+AGG | 0.687071 | 1.3:-58927482 | MS.gene44131:CDS |
| TGATGATCAAGCCGTCAAAG+TGG | 0.714042 | 1.3:-58927259 | MS.gene44131:CDS |
| AAATTGAGAATGGAATGTTG+TGG | 0.718062 | 1.3:-58927493 | MS.gene44131:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAAAGATTATTTATTTAT+GGG | + | chr1.3:58928254-58928273 | None:intergenic | 10.0% |
| !! | AATGTAGTATTAAATGATTA+AGG | + | chr1.3:58926995-58927014 | None:intergenic | 15.0% |
| !! | CAGTAAAGATTATTTATTTA+TGG | + | chr1.3:58928255-58928274 | None:intergenic | 15.0% |
| !! | CTAATTTATGAACATATATT+TGG | + | chr1.3:58927652-58927671 | None:intergenic | 15.0% |
| !!! | AATTATTTAAAACTAAAGTG+AGG | + | chr1.3:58926838-58926857 | None:intergenic | 15.0% |
| !!! | ATATTAGAGATTATTGTTTT+TGG | - | chr1.3:58927438-58927457 | MS.gene44131:intron | 15.0% |
| !!! | TTATCTTTCATCTTTTTATT+TGG | - | chr1.3:58928011-58928030 | MS.gene44131:intron | 15.0% |
| !! | CTTAATCTAATACTTGATTA+TGG | - | chr1.3:58927383-58927402 | MS.gene44131:intron | 20.0% |
| !! | TAAATATATAGGGGTAATAT+AGG | - | chr1.3:58927037-58927056 | MS.gene44131:intron | 20.0% |
| !! | TAAGAGATAATCATGTTTAA+GGG | + | chr1.3:58927367-58927386 | None:intergenic | 20.0% |
| !! | TAGAAAGAAACATTATAGAA+AGG | + | chr1.3:58927608-58927627 | None:intergenic | 20.0% |
| !! | TTAAGAGATAATCATGTTTA+AGG | + | chr1.3:58927368-58927387 | None:intergenic | 20.0% |
| !!! | ATAAAAACAGAGAAGTTTTA+AGG | - | chr1.3:58927209-58927228 | MS.gene44131:CDS | 20.0% |
| !!! | CTTTTTTGTGGATAAATATA+GGG | - | chr1.3:58928050-58928069 | MS.gene44131:intron | 20.0% |
| !!! | TAAAACTTCTCTGTTTTTAT+GGG | + | chr1.3:58927209-58927228 | None:intergenic | 20.0% |
| !!! | TCTTTTTTGTGGATAAATAT+AGG | - | chr1.3:58928049-58928068 | MS.gene44131:intron | 20.0% |
| !!! | TTAAAACTTCTCTGTTTTTA+TGG | + | chr1.3:58927210-58927229 | None:intergenic | 20.0% |
| ! | AAAAATCTCAAAGATGATGA+TGG | + | chr1.3:58926687-58926706 | None:intergenic | 25.0% |
| ! | ATGCAAAAGTGACAATTATA+AGG | - | chr1.3:58927123-58927142 | MS.gene44131:CDS | 25.0% |
| ! | ATTACACAACAATCAACTTT+AGG | + | chr1.3:58927675-58927694 | None:intergenic | 25.0% |
| ! | CTCTCTGCAATAAATATATA+GGG | - | chr1.3:58927027-58927046 | MS.gene44131:intron | 25.0% |
| ! | GAAATTCATTCACTAAATAC+AGG | + | chr1.3:58926779-58926798 | None:intergenic | 25.0% |
| ! | GATGAAATACATACAATTGT+AGG | + | chr1.3:58927990-58928009 | None:intergenic | 25.0% |
| ! | TCGAAATGTGACAATTAAAA+AGG | + | chr1.3:58926899-58926918 | None:intergenic | 25.0% |
| ! | TCTCTCTGCAATAAATATAT+AGG | - | chr1.3:58927026-58927045 | MS.gene44131:intron | 25.0% |
| ! | TCTCTGCAATAAATATATAG+GGG | - | chr1.3:58927028-58927047 | MS.gene44131:intron | 25.0% |
| ! | TGCAAAAGTGACAATTATAA+GGG | - | chr1.3:58927124-58927143 | MS.gene44131:CDS | 25.0% |
| ! | TTGTGACAGGATTAAATTTA+TGG | - | chr1.3:58927308-58927327 | MS.gene44131:CDS | 25.0% |
| !! | GTTCAAAGTATCATTAAATG+TGG | + | chr1.3:58927068-58927087 | None:intergenic | 25.0% |
| !! | TCGTTTGTATTTCTTTTCAT+AGG | - | chr1.3:58926718-58926737 | MS.gene44131:CDS | 25.0% |
| !!! | AGTAAAAGTATTTGTTGTCT+TGG | + | chr1.3:58926935-58926954 | None:intergenic | 25.0% |
| !!! | ATTAAGTTCTCTCTTTTTTG+TGG | - | chr1.3:58928038-58928057 | MS.gene44131:intron | 25.0% |
| AAATTGAGAATGGAATGTTG+TGG | - | chr1.3:58927552-58927571 | MS.gene44131:intron | 30.0% | |
| AACAATATCAACCACTTTGA+CGG | + | chr1.3:58927800-58927819 | None:intergenic | 30.0% | |
| AAGTGACAATTATAAGGGAA+CGG | - | chr1.3:58927129-58927148 | MS.gene44131:CDS | 30.0% | |
| AATTGAGAATGGAATGTTGT+GGG | - | chr1.3:58927553-58927572 | MS.gene44131:intron | 30.0% | |
| AATTGCTTCTTATCAAAAGC+TGG | + | chr1.3:58927847-58927866 | None:intergenic | 30.0% | |
| CTTTGCTGATGAATTTCTTT+AGG | - | chr1.3:58927494-58927513 | MS.gene44131:CDS | 30.0% | |
| GACAATTAAAAAGGAACAGA+GGG | + | chr1.3:58926890-58926909 | None:intergenic | 30.0% | |
| GTAATGTGATTATTTGCAGT+GGG | - | chr1.3:58927690-58927709 | MS.gene44131:intron | 30.0% | |
| TGACAATTAAAAAGGAACAG+AGG | + | chr1.3:58926891-58926910 | None:intergenic | 30.0% | |
| TGTAATGTGATTATTTGCAG+TGG | - | chr1.3:58927689-58927708 | MS.gene44131:intron | 30.0% | |
| TTGATATTGTTGACACTTTC+AGG | - | chr1.3:58927809-58927828 | MS.gene44131:intron | 30.0% | |
| ! | TTATGTTGTTTGTGTTCTGT+TGG | - | chr1.3:58927253-58927272 | MS.gene44131:CDS | 30.0% |
| !! | AATCAATGTTGCAGTTTTGT+TGG | - | chr1.3:58928286-58928305 | MS.gene44131:intron | 30.0% |
| !!! | ATCAATGTTGCAGTTTTGTT+GGG | - | chr1.3:58928287-58928306 | MS.gene44131:intron | 30.0% |
| !!! | TTATTGTTTTTGGTTGCTGA+TGG | - | chr1.3:58927448-58927467 | MS.gene44131:intron | 30.0% |
| AATTGTAGGTCCTTGAGTTT+AGG | + | chr1.3:58927976-58927995 | None:intergenic | 35.0% | |
| ATTGTAGGTCCTTGAGTTTA+GGG | + | chr1.3:58927975-58927994 | None:intergenic | 35.0% | |
| ATTTACCTGTAAGAAGATCC+TGG | + | chr1.3:58926664-58926683 | None:intergenic | 35.0% | |
| GTTGCTGACATCTAAATTAG+AGG | - | chr1.3:58927894-58927913 | MS.gene44131:intron | 35.0% | |
| TAGGCAAAGTAGAGAAAAGT+TGG | + | chr1.3:58928373-58928392 | None:intergenic | 35.0% | |
| ! | ACTTTTCTCTACTTTGCCTA+TGG | - | chr1.3:58928373-58928392 | MS.gene44131:intron | 35.0% |
| !! | AAATGTTAACTTGTGCCCTT+GGG | - | chr1.3:58928073-58928092 | MS.gene44131:intron | 35.0% |
| !!! | TCAATGTTGCAGTTTTGTTG+GGG | - | chr1.3:58928288-58928307 | MS.gene44131:intron | 35.0% |
| CATTCTCAATTTCCTTGCAG+GGG | + | chr1.3:58927544-58927563 | None:intergenic | 40.0% | |
| CCATTCTCAATTTCCTTGCA+GGG | + | chr1.3:58927545-58927564 | None:intergenic | 40.0% | |
| CCTTGTAGTAAGCAAACACA+AGG | + | chr1.3:58928336-58928355 | None:intergenic | 40.0% | |
| CCTTGTGTTTGCTTACTACA+AGG | - | chr1.3:58928333-58928352 | MS.gene44131:intron | 40.0% | |
| CTTCTTAACTTATGCCCCAA+GGG | + | chr1.3:58928091-58928110 | None:intergenic | 40.0% | |
| CTTGATTTCCTTCAAGCCAT+AGG | + | chr1.3:58928392-58928411 | None:intergenic | 40.0% | |
| GACAATTATAAGGGAACGGA+GGG | - | chr1.3:58927133-58927152 | MS.gene44131:CDS | 40.0% | |
| GTAGAGAAAAGTTGGATCAG+TGG | + | chr1.3:58928365-58928384 | None:intergenic | 40.0% | |
| GTATACCAGGATCTTCTTAC+AGG | - | chr1.3:58926656-58926675 | MS.gene44131:CDS | 40.0% | |
| GTGTTTGCTTACTACAAGGA+TGG | - | chr1.3:58928337-58928356 | MS.gene44131:intron | 40.0% | |
| TCCATTCTCAATTTCCTTGC+AGG | + | chr1.3:58927546-58927565 | None:intergenic | 40.0% | |
| TCTTCTTAACTTATGCCCCA+AGG | + | chr1.3:58928092-58928111 | None:intergenic | 40.0% | |
| TGACAATTATAAGGGAACGG+AGG | - | chr1.3:58927132-58927151 | MS.gene44131:CDS | 40.0% | |
| TGTTGTGTTTGTGTTGTGAC+AGG | - | chr1.3:58927295-58927314 | MS.gene44131:CDS | 40.0% | |
| !! | AATGTTAACTTGTGCCCTTG+GGG | - | chr1.3:58928074-58928093 | MS.gene44131:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | + | chr1.3:58928230-58928249 | None:intergenic | 40.0% |
| !! | GAAATGTTAACTTGTGCCCT+TGG | - | chr1.3:58928072-58928091 | MS.gene44131:intron | 40.0% |
| !! | TATTTGCAGTGGGTTGTTCA+AGG | - | chr1.3:58927700-58927719 | MS.gene44131:intron | 40.0% |
| !! | TCATGTTAACTTGTGCCCTA+AGG | + | chr1.3:58928231-58928250 | None:intergenic | 40.0% |
| CCCTGCAAGGAAATTGAGAA+TGG | - | chr1.3:58927542-58927561 | MS.gene44131:intron | 45.0% | |
| CTACTTTGCCTATGGCTTGA+AGG | - | chr1.3:58928381-58928400 | MS.gene44131:intron | 45.0% | |
| GAATGGAATGTTGTGGGAAG+TGG | - | chr1.3:58927559-58927578 | MS.gene44131:intron | 45.0% | |
| GGAGCAGTGGATGTGAATAT+TGG | - | chr1.3:58927721-58927740 | MS.gene44131:intron | 45.0% | |
| GTTCCTTCTCCCTAAACTCA+AGG | - | chr1.3:58927963-58927982 | MS.gene44131:intron | 45.0% | |
| TGATGATCAAGCCGTCAAAG+TGG | - | chr1.3:58927786-58927805 | MS.gene44131:intron | 45.0% | |
| TGTTGACACTTTCAGGCTTC+AGG | - | chr1.3:58927816-58927835 | MS.gene44131:intron | 45.0% | |
| !! | CTCCTTAACTTGTGCCCTTA+GGG | - | chr1.3:58928213-58928232 | MS.gene44131:intron | 45.0% |
| !! | TCTCCTTAACTTGTGCCCTT+AGG | - | chr1.3:58928212-58928231 | MS.gene44131:intron | 45.0% |
| GGAATGTTGTGGGAAGTGGA+AGG | - | chr1.3:58927563-58927582 | MS.gene44131:intron | 50.0% | |
| GGGAAGTGGAAGGAAAGGTT+AGG | - | chr1.3:58927573-58927592 | MS.gene44131:intron | 50.0% | |
| GGTCCTTGAGTTTAGGGAGA+AGG | + | chr1.3:58927969-58927988 | None:intergenic | 50.0% | |
| GTTGTGGGAAGTGGAAGGAA+AGG | - | chr1.3:58927568-58927587 | MS.gene44131:intron | 50.0% | |
| ! | TGCCCTAAGGGCACAAGTTA+AGG | + | chr1.3:58928218-58928237 | None:intergenic | 50.0% |
| CTCTGACTCATTCCCCTGCA+AGG | - | chr1.3:58927529-58927548 | MS.gene44131:CDS | 55.0% | |
| GGTGCTAACCCTTCTGCAGA+GGG | - | chr1.3:58927742-58927761 | MS.gene44131:intron | 55.0% | |
| ! | GGGGAGAGCATGCATGATGA+TGG | - | chr1.3:58928307-58928326 | MS.gene44131:intron | 55.0% |
| ! | GTGGGTTGTTCAAGGAGCAG+TGG | - | chr1.3:58927708-58927727 | MS.gene44131:intron | 55.0% |
| ! | TGGTGCTAACCCTTCTGCAG+AGG | - | chr1.3:58927741-58927760 | MS.gene44131:intron | 55.0% |
| CGTCTCCACCCTCTGCAGAA+GGG | + | chr1.3:58927753-58927772 | None:intergenic | 60.0% | |
| GAGGGTGGAGACGAGGATGA+CGG | - | chr1.3:58927760-58927779 | MS.gene44131:intron | 60.0% | |
| GCTAACCCTTCTGCAGAGGG+TGG | - | chr1.3:58927745-58927764 | MS.gene44131:intron | 60.0% | |
| TCGTCTCCACCCTCTGCAGA+AGG | + | chr1.3:58927754-58927773 | None:intergenic | 60.0% | |
| TTCTGCAGAGGGTGGAGACG+AGG | - | chr1.3:58927753-58927772 | MS.gene44131:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 58926650 | 58928417 | 58926650 | ID=MS.gene44131 |
| chr1.3 | mRNA | 58926650 | 58928417 | 58926650 | ID=MS.gene44131.t1;Parent=MS.gene44131 |
| chr1.3 | exon | 58928390 | 58928417 | 58928390 | ID=MS.gene44131.t1.exon1;Parent=MS.gene44131.t1 |
| chr1.3 | CDS | 58928390 | 58928417 | 58928390 | ID=cds.MS.gene44131.t1;Parent=MS.gene44131.t1 |
| chr1.3 | exon | 58927478 | 58927551 | 58927478 | ID=MS.gene44131.t1.exon2;Parent=MS.gene44131.t1 |
| chr1.3 | CDS | 58927478 | 58927551 | 58927478 | ID=cds.MS.gene44131.t1;Parent=MS.gene44131.t1 |
| chr1.3 | exon | 58927072 | 58927358 | 58927072 | ID=MS.gene44131.t1.exon3;Parent=MS.gene44131.t1 |
| chr1.3 | CDS | 58927072 | 58927358 | 58927072 | ID=cds.MS.gene44131.t1;Parent=MS.gene44131.t1 |
| chr1.3 | exon | 58926650 | 58926767 | 58926650 | ID=MS.gene44131.t1.exon4;Parent=MS.gene44131.t1 |
| chr1.3 | CDS | 58926650 | 58926767 | 58926650 | ID=cds.MS.gene44131.t1;Parent=MS.gene44131.t1 |
| Gene Sequence |
| Protein sequence |
