Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056064.t1 | XP_003591148.1 | 99.4 | 168 | 1 | 0 | 1 | 168 | 1 | 168 | 1.70E-89 | 338.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056064.t1 | Q5J907 | 91.1 | 168 | 15 | 0 | 1 | 168 | 1 | 168 | 4.1e-84 | 312.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056064.t1 | G7I8P9 | 99.4 | 168 | 1 | 0 | 1 | 168 | 1 | 168 | 1.2e-89 | 338.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049419 | MS.gene056064 | -0.818315 | 2.09E-52 | -1.69E-46 |
| MS.gene050105 | MS.gene056064 | 0.810007 | 1.43E-50 | -1.69E-46 |
| MS.gene051368 | MS.gene056064 | 0.810929 | 9.03E-51 | -1.69E-46 |
| MS.gene056064 | MS.gene057156 | -0.834975 | 2.20E-56 | -1.69E-46 |
| MS.gene056064 | MS.gene060851 | 0.80484 | 1.78E-49 | -1.69E-46 |
| MS.gene056064 | MS.gene060852 | 0.802901 | 4.50E-49 | -1.69E-46 |
| MS.gene056064 | MS.gene060879 | 0.80262 | 5.15E-49 | -1.69E-46 |
| MS.gene056064 | MS.gene065461 | -0.830571 | 2.72E-55 | -1.69E-46 |
| MS.gene056064 | MS.gene06857 | 0.809425 | 1.90E-50 | -1.69E-46 |
| MS.gene056064 | MS.gene070713 | -0.826196 | 3.10E-54 | -1.69E-46 |
| MS.gene056064 | MS.gene071667 | -0.849133 | 3.93E-60 | -1.69E-46 |
| MS.gene056064 | MS.gene071669 | -0.82883 | 7.23E-55 | -1.69E-46 |
| MS.gene056064 | MS.gene071670 | -0.833722 | 4.53E-56 | -1.69E-46 |
| MS.gene056064 | MS.gene073032 | 0.804084 | 2.56E-49 | -1.69E-46 |
| MS.gene056064 | MS.gene20481 | 0.818886 | 1.55E-52 | -1.69E-46 |
| MS.gene056064 | MS.gene25241 | -0.801587 | 8.39E-49 | -1.69E-46 |
| MS.gene056064 | MS.gene30397 | 0.810176 | 1.31E-50 | -1.69E-46 |
| MS.gene056064 | MS.gene36229 | 0.803127 | 4.04E-49 | -1.69E-46 |
| MS.gene056064 | MS.gene36231 | 0.81083 | 9.49E-51 | -1.69E-46 |
| MS.gene056064 | MS.gene36571 | 0.800954 | 1.13E-48 | -1.69E-46 |
| MS.gene056064 | MS.gene39376 | -0.842793 | 2.08E-58 | -1.69E-46 |
| MS.gene056064 | MS.gene39695 | -0.842601 | 2.34E-58 | -1.69E-46 |
| MS.gene056064 | MS.gene40839 | 0.828538 | 8.50E-55 | -1.69E-46 |
| MS.gene056064 | MS.gene40880 | 0.930582 | 1.33E-93 | -1.69E-46 |
| MS.gene056064 | MS.gene44131 | 0.89683 | 2.53E-76 | -1.69E-46 |
| MS.gene056064 | MS.gene44406 | -0.8124 | 4.32E-51 | -1.69E-46 |
| MS.gene056064 | MS.gene44407 | -0.829299 | 5.56E-55 | -1.69E-46 |
| MS.gene056064 | MS.gene45652 | 0.802741 | 4.86E-49 | -1.69E-46 |
| MS.gene056064 | MS.gene47801 | 0.807255 | 5.53E-50 | -1.69E-46 |
| MS.gene056064 | MS.gene49602 | 0.804436 | 2.16E-49 | -1.69E-46 |
| MS.gene056064 | MS.gene51650 | 0.817145 | 3.84E-52 | -1.69E-46 |
| MS.gene056064 | MS.gene56285 | 0.828836 | 7.20E-55 | -1.69E-46 |
| MS.gene056064 | MS.gene63539 | 0.829187 | 5.92E-55 | -1.69E-46 |
| MS.gene056064 | MS.gene77579 | 0.808034 | 3.78E-50 | -1.69E-46 |
| MS.gene056064 | MS.gene81272 | 0.807097 | 5.97E-50 | -1.69E-46 |
| MS.gene056064 | MS.gene82325 | 0.82749 | 1.52E-54 | -1.69E-46 |
| MS.gene056064 | MS.gene89049 | 0.806676 | 7.33E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056064.t1 | MTR_1g083350 | 99.405 | 168 | 1 | 0 | 1 | 168 | 1 | 168 | 1.37e-121 | 340 |
| MS.gene056064.t1 | MTR_1g083380 | 98.810 | 168 | 2 | 0 | 1 | 168 | 1 | 168 | 1.12e-120 | 337 |
| MS.gene056064.t1 | MTR_2g436620 | 86.310 | 168 | 22 | 1 | 1 | 168 | 1 | 167 | 3.04e-103 | 293 |
| MS.gene056064.t1 | MTR_1g083340 | 91.720 | 157 | 3 | 1 | 1 | 147 | 1 | 157 | 9.42e-99 | 281 |
| MS.gene056064.t1 | MTR_6g071090 | 81.366 | 161 | 29 | 1 | 1 | 161 | 1 | 160 | 1.18e-90 | 261 |
| MS.gene056064.t1 | MTR_2g436620 | 84.507 | 142 | 21 | 1 | 27 | 168 | 1 | 141 | 1.27e-83 | 243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056064.t1 | AT3G16640 | 79.167 | 168 | 35 | 0 | 1 | 168 | 1 | 168 | 4.54e-97 | 278 |
| MS.gene056064.t1 | AT3G05540 | 80.473 | 169 | 31 | 2 | 1 | 168 | 1 | 168 | 3.23e-90 | 260 |
Find 42 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATTGTTGACACTTTC+AGG | 0.110440 | 1.1:-61650252 | MS.gene056064:CDS |
| AATTGTAGGTCCTTGAGTTT+AGG | 0.253357 | 1.1:+61650088 | None:intergenic |
| ATTGTAGGTCCTTGAGTTTA+GGG | 0.271566 | 1.1:+61650089 | None:intergenic |
| GTATACCAGGATCTTCTTAC+AGG | 0.300413 | 1.1:-61651131 | MS.gene056064:intron |
| TGTTGACACTTTCAGGCTTC+AGG | 0.310211 | 1.1:-61650245 | MS.gene056064:CDS |
| TCCATTCTCAATTTCCTTGT+AGG | 0.360282 | 1.1:+61650518 | None:intergenic |
| CTACTTTGCCTATGGCTTGA+AGG | 0.378916 | 1.1:-61649680 | MS.gene056064:CDS |
| AACAATATCAACCACTTTGA+CGG | 0.381711 | 1.1:+61650264 | None:intergenic |
| GATGAAATACATACAATTGT+AGG | 0.387035 | 1.1:+61650074 | None:intergenic |
| CCATTCTCAATTTCCTTGTA+GGG | 0.404442 | 1.1:+61650519 | None:intergenic |
| AATTGCTTCTTATCAAAAGC+TGG | 0.428621 | 1.1:+61650217 | None:intergenic |
| CCTTGTGTTTGCTTACTACA+AGG | 0.455642 | 1.1:-61649728 | MS.gene056064:CDS |
| GAATGGAATGTTGTGGGAAG+TGG | 0.459626 | 1.1:-61650502 | MS.gene056064:CDS |
| TAGGCAAAGTAGAGAAAAGT+TGG | 0.474181 | 1.1:+61649691 | None:intergenic |
| CCCTACAAGGAAATTGAGAA+TGG | 0.477742 | 1.1:-61650519 | MS.gene056064:CDS |
| TCGTCTCCACCCTCTGCAGA+AGG | 0.482179 | 1.1:+61650310 | None:intergenic |
| TATTTGCAGTGGGTTGTTCA+AGG | 0.483236 | 1.1:-61650361 | MS.gene056064:intron |
| CTCTGACTCATTCCCCTACA+AGG | 0.486361 | 1.1:-61650532 | MS.gene056064:CDS |
| CTTGATTTCCTTCAAGCCAT+AGG | 0.498561 | 1.1:+61649672 | None:intergenic |
| GGAGCAGTGGATGTGAATAT+TGG | 0.501116 | 1.1:-61650340 | MS.gene056064:CDS |
| TGCAACCATGCTTGTATACC+AGG | 0.506466 | 1.1:-61651144 | None:intergenic |
| GGTGCTAACCCTTCTGCAGA+GGG | 0.509467 | 1.1:-61650319 | MS.gene056064:CDS |
| GTGTTTGCTTACTACAAGGA+TGG | 0.538874 | 1.1:-61649724 | MS.gene056064:CDS |
| GGTCCTTGAGTTTAGGGAGA+AGG | 0.545288 | 1.1:+61650095 | None:intergenic |
| CATTCTCAATTTCCTTGTAG+GGG | 0.549656 | 1.1:+61650520 | None:intergenic |
| GTTCCTTCTCCCTAAACTCA+AGG | 0.563294 | 1.1:-61650098 | MS.gene056064:CDS |
| GGGGAGAGCATGCATGATGA+TGG | 0.565967 | 1.1:-61649754 | MS.gene056064:CDS |
| CGTCTCCACCCTCTGCAGAA+GGG | 0.579433 | 1.1:+61650311 | None:intergenic |
| ATTTACCTGTAAGAAGATCC+TGG | 0.582754 | 1.1:+61651126 | None:intergenic |
| GTTGTGGGAAGTGGAAGGAA+AGG | 0.585239 | 1.1:-61650493 | MS.gene056064:intron |
| AATTGAGAATGGAATGTTGT+GGG | 0.593952 | 1.1:-61650508 | MS.gene056064:CDS |
| TTCTGCAGAGGGTGGAGACG+AGG | 0.598044 | 1.1:-61650308 | MS.gene056064:CDS |
| GCTAACCCTTCTGCAGAGGG+TGG | 0.604009 | 1.1:-61650316 | MS.gene056064:CDS |
| GTAGAGAAAAGTTGGATCAG+TGG | 0.605758 | 1.1:+61649699 | None:intergenic |
| GAGGGTGGAGACGAGGATGA+CGG | 0.612656 | 1.1:-61650301 | MS.gene056064:CDS |
| AAGATCCTGGTATACAAGCA+TGG | 0.618624 | 1.1:+61651139 | None:intergenic |
| TGGTGCTAACCCTTCTGCAG+AGG | 0.618744 | 1.1:-61650320 | MS.gene056064:CDS |
| CCTTGTAGTAAGCAAACACA+AGG | 0.635355 | 1.1:+61649728 | None:intergenic |
| GTGGGTTGTTCAAGGAGCAG+TGG | 0.636439 | 1.1:-61650353 | MS.gene056064:CDS |
| GGAATGTTGTGGGAAGTGGA+AGG | 0.687071 | 1.1:-61650498 | MS.gene056064:CDS |
| TGATGATCAAGCCGTCAAAG+TGG | 0.714042 | 1.1:-61650275 | MS.gene056064:CDS |
| AAATTGAGAATGGAATGTTG+TGG | 0.718062 | 1.1:-61650509 | MS.gene056064:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAGTAAATATTATTTATTTA+TGG | + | chr1.1:61650997-61651016 | None:intergenic | 10.0% |
| !!! | AATTATTTAAAACTAAAGTG+AGG | + | chr1.1:61649854-61649873 | None:intergenic | 15.0% |
| !!! | ATATTAGAGATTATTGTTTT+TGG | - | chr1.1:61650180-61650199 | MS.gene056064:CDS | 15.0% |
| !!! | TTATCTTTCATCTTTTTATT+TGG | - | chr1.1:61650753-61650772 | MS.gene056064:intron | 15.0% |
| !! | CTAATTTATGAACATACATT+TGG | + | chr1.1:61650394-61650413 | None:intergenic | 20.0% |
| !! | CTTAATCTAATACTTGATTA+TGG | - | chr1.1:61650125-61650144 | MS.gene056064:CDS | 20.0% |
| !! | TAAGAGATAATCATGTTTAA+GGG | + | chr1.1:61650109-61650128 | None:intergenic | 20.0% |
| !! | TAGAAAGAAACATTATAGAA+AGG | + | chr1.1:61650350-61650369 | None:intergenic | 20.0% |
| !! | TTAAGAGATAATCATGTTTA+AGG | + | chr1.1:61650110-61650129 | None:intergenic | 20.0% |
| !!! | ATAAAAACAGAGAAGTTTTA+AGG | - | chr1.1:61649951-61649970 | MS.gene056064:intron | 20.0% |
| !!! | CTTTTTTGTGGATAAATAAA+GGG | - | chr1.1:61650792-61650811 | MS.gene056064:intron | 20.0% |
| !!! | TAAAACTTCTCTGTTTTTAT+GGG | + | chr1.1:61649951-61649970 | None:intergenic | 20.0% |
| !!! | TCTTTTTTGTGGATAAATAA+AGG | - | chr1.1:61650791-61650810 | MS.gene056064:intron | 20.0% |
| !!! | TTAAAACTTCTCTGTTTTTA+TGG | + | chr1.1:61649952-61649971 | None:intergenic | 20.0% |
| ! | AAAAATCTCAAAGATGATGA+TGG | + | chr1.1:61649703-61649722 | None:intergenic | 25.0% |
| ! | ATTACACAACAATCAACTTT+AGG | + | chr1.1:61650417-61650436 | None:intergenic | 25.0% |
| ! | GAAATTCATTCACTAAATAC+AGG | + | chr1.1:61649795-61649814 | None:intergenic | 25.0% |
| ! | GATGAAATACATACAATTGT+AGG | + | chr1.1:61650732-61650751 | None:intergenic | 25.0% |
| ! | TTGTGACAGGATTAAATTTA+TGG | - | chr1.1:61650050-61650069 | MS.gene056064:intron | 25.0% |
| !! | TCGTTTGTATTTCTTTTCAT+AGG | - | chr1.1:61649734-61649753 | MS.gene056064:CDS | 25.0% |
| !!! | ATTAAGTTCTCTCTTTTTTG+TGG | - | chr1.1:61650780-61650799 | MS.gene056064:intron | 25.0% |
| AAATTGAGAATGGAATGTTG+TGG | - | chr1.1:61650294-61650313 | MS.gene056064:CDS | 30.0% | |
| AACAATATCAACCACTTTGA+CGG | + | chr1.1:61650542-61650561 | None:intergenic | 30.0% | |
| AATTGAGAATGGAATGTTGT+GGG | - | chr1.1:61650295-61650314 | MS.gene056064:CDS | 30.0% | |
| AATTGCTTCTTATCAAAAGC+TGG | + | chr1.1:61650589-61650608 | None:intergenic | 30.0% | |
| CTTTGCTGATGAATTTCTTT+AGG | - | chr1.1:61650236-61650255 | MS.gene056064:CDS | 30.0% | |
| GTAATGTGATTATTTGCAGT+GGG | - | chr1.1:61650432-61650451 | MS.gene056064:intron | 30.0% | |
| TGTAATGTGATTATTTGCAG+TGG | - | chr1.1:61650431-61650450 | MS.gene056064:intron | 30.0% | |
| TTGATATTGTTGACACTTTC+AGG | - | chr1.1:61650551-61650570 | MS.gene056064:intron | 30.0% | |
| ! | TTATGTTGTTTGTGTTCTGT+TGG | - | chr1.1:61649995-61650014 | MS.gene056064:intron | 30.0% |
| !! | AATCAATGTTGCAGTTTTGT+TGG | - | chr1.1:61651028-61651047 | MS.gene056064:intron | 30.0% |
| !!! | ATCAATGTTGCAGTTTTGTT+GGG | - | chr1.1:61651029-61651048 | MS.gene056064:intron | 30.0% |
| !!! | TTATTGTTTTTGGTTGCTGA+TGG | - | chr1.1:61650190-61650209 | MS.gene056064:CDS | 30.0% |
| AATTGTAGGTCCTTGAGTTT+AGG | + | chr1.1:61650718-61650737 | None:intergenic | 35.0% | |
| ATTGTAGGTCCTTGAGTTTA+GGG | + | chr1.1:61650717-61650736 | None:intergenic | 35.0% | |
| ATTTACCTGTAAGAAGATCC+TGG | + | chr1.1:61649680-61649699 | None:intergenic | 35.0% | |
| CATTCTCAATTTCCTTGTAG+GGG | + | chr1.1:61650286-61650305 | None:intergenic | 35.0% | |
| CCATTCTCAATTTCCTTGTA+GGG | + | chr1.1:61650287-61650306 | None:intergenic | 35.0% | |
| TAGGCAAAGTAGAGAAAAGT+TGG | + | chr1.1:61651115-61651134 | None:intergenic | 35.0% | |
| TCCATTCTCAATTTCCTTGT+AGG | + | chr1.1:61650288-61650307 | None:intergenic | 35.0% | |
| ! | ACTTTTCTCTACTTTGCCTA+TGG | - | chr1.1:61651115-61651134 | MS.gene056064:intron | 35.0% |
| !! | AAATGTTAACTTGTGCCCTT+GGG | - | chr1.1:61650815-61650834 | MS.gene056064:intron | 35.0% |
| !! | TTGAACAACTCTTGCTTTTC+TGG | + | chr1.1:61650661-61650680 | None:intergenic | 35.0% |
| !!! | TCAATGTTGCAGTTTTGTTG+GGG | - | chr1.1:61651030-61651049 | MS.gene056064:intron | 35.0% |
| CCCTACAAGGAAATTGAGAA+TGG | - | chr1.1:61650284-61650303 | MS.gene056064:CDS | 40.0% | |
| CCTTGTAGTAAGCAAACACA+AGG | + | chr1.1:61651078-61651097 | None:intergenic | 40.0% | |
| CCTTGTGTTTGCTTACTACA+AGG | - | chr1.1:61651075-61651094 | MS.gene056064:intron | 40.0% | |
| CTTCTTAACTTATGCCCCAA+GGG | + | chr1.1:61650833-61650852 | None:intergenic | 40.0% | |
| CTTGATTTCCTTCAAGCCAT+AGG | + | chr1.1:61651134-61651153 | None:intergenic | 40.0% | |
| GTAGAGAAAAGTTGGATCAG+TGG | + | chr1.1:61651107-61651126 | None:intergenic | 40.0% | |
| GTATACCAGGATCTTCTTAC+AGG | - | chr1.1:61649672-61649691 | MS.gene056064:CDS | 40.0% | |
| GTGTTTGCTTACTACAAGGA+TGG | - | chr1.1:61651079-61651098 | MS.gene056064:intron | 40.0% | |
| TCTTCTTAACTTATGCCCCA+AGG | + | chr1.1:61650834-61650853 | None:intergenic | 40.0% | |
| TGTTGTGTTTGTGTTGTGAC+AGG | - | chr1.1:61650037-61650056 | MS.gene056064:intron | 40.0% | |
| !! | AATGTTAACTTGTGCCCTTG+GGG | - | chr1.1:61650816-61650835 | MS.gene056064:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | + | chr1.1:61650972-61650991 | None:intergenic | 40.0% |
| !! | GAAATGTTAACTTGTGCCCT+TGG | - | chr1.1:61650814-61650833 | MS.gene056064:intron | 40.0% |
| !! | TATTTGCAGTGGGTTGTTCA+AGG | - | chr1.1:61650442-61650461 | MS.gene056064:intron | 40.0% |
| !! | TCATGTTAACTTGTGCCCTA+AGG | + | chr1.1:61650973-61650992 | None:intergenic | 40.0% |
| CTACTTTGCCTATGGCTTGA+AGG | - | chr1.1:61651123-61651142 | MS.gene056064:intron | 45.0% | |
| GAATGGAATGTTGTGGGAAG+TGG | - | chr1.1:61650301-61650320 | MS.gene056064:CDS | 45.0% | |
| GGAGCAGTGGATGTGAATAT+TGG | - | chr1.1:61650463-61650482 | MS.gene056064:intron | 45.0% | |
| GTTCCTTCTCCCTAAACTCA+AGG | - | chr1.1:61650705-61650724 | MS.gene056064:intron | 45.0% | |
| TGATGATCAAGCCGTCAAAG+TGG | - | chr1.1:61650528-61650547 | MS.gene056064:CDS | 45.0% | |
| TGTTGACACTTTCAGGCTTC+AGG | - | chr1.1:61650558-61650577 | MS.gene056064:intron | 45.0% | |
| !! | CTCCTTAACTTGTGCCCTTA+GGG | - | chr1.1:61650955-61650974 | MS.gene056064:intron | 45.0% |
| !! | TCTCCTTAACTTGTGCCCTT+AGG | - | chr1.1:61650954-61650973 | MS.gene056064:intron | 45.0% |
| !! | AGTAAATATTATTTATTTAT+GGG | + | chr1.1:61650996-61651015 | None:intergenic | 5.0% |
| CTCTGACTCATTCCCCTACA+AGG | - | chr1.1:61650271-61650290 | MS.gene056064:CDS | 50.0% | |
| GGAATGTTGTGGGAAGTGGA+AGG | - | chr1.1:61650305-61650324 | MS.gene056064:CDS | 50.0% | |
| GGGAAGTGGAAGGAAAGGTT+AGG | - | chr1.1:61650315-61650334 | MS.gene056064:CDS | 50.0% | |
| GGTCCTTGAGTTTAGGGAGA+AGG | + | chr1.1:61650711-61650730 | None:intergenic | 50.0% | |
| GTTGTGGGAAGTGGAAGGAA+AGG | - | chr1.1:61650310-61650329 | MS.gene056064:CDS | 50.0% | |
| ! | TGCCCTAAGGGCACAAGTTA+AGG | + | chr1.1:61650960-61650979 | None:intergenic | 50.0% |
| GGTGCTAACCCTTCTGCAGA+GGG | - | chr1.1:61650484-61650503 | MS.gene056064:intron | 55.0% | |
| ! | GGGGAGAGCATGCATGATGA+TGG | - | chr1.1:61651049-61651068 | MS.gene056064:intron | 55.0% |
| ! | GTGGGTTGTTCAAGGAGCAG+TGG | - | chr1.1:61650450-61650469 | MS.gene056064:intron | 55.0% |
| ! | TGGTGCTAACCCTTCTGCAG+AGG | - | chr1.1:61650483-61650502 | MS.gene056064:intron | 55.0% |
| CGTCTCCACCCTCTGCAGAA+GGG | + | chr1.1:61650495-61650514 | None:intergenic | 60.0% | |
| GAGGGTGGAGACGAGGATGA+CGG | - | chr1.1:61650502-61650521 | MS.gene056064:CDS | 60.0% | |
| GCTAACCCTTCTGCAGAGGG+TGG | - | chr1.1:61650487-61650506 | MS.gene056064:intron | 60.0% | |
| TCGTCTCCACCCTCTGCAGA+AGG | + | chr1.1:61650496-61650515 | None:intergenic | 60.0% | |
| TTCTGCAGAGGGTGGAGACG+AGG | - | chr1.1:61650495-61650514 | MS.gene056064:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 61649666 | 61651159 | 61649666 | ID=MS.gene056064 |
| chr1.1 | mRNA | 61649666 | 61651159 | 61649666 | ID=MS.gene056064.t1;Parent=MS.gene056064 |
| chr1.1 | exon | 61651132 | 61651159 | 61651132 | ID=MS.gene056064.t1.exon1;Parent=MS.gene056064.t1 |
| chr1.1 | CDS | 61651132 | 61651159 | 61651132 | ID=cds.MS.gene056064.t1;Parent=MS.gene056064.t1 |
| chr1.1 | exon | 61650494 | 61650567 | 61650494 | ID=MS.gene056064.t1.exon2;Parent=MS.gene056064.t1 |
| chr1.1 | CDS | 61650494 | 61650567 | 61650494 | ID=cds.MS.gene056064.t1;Parent=MS.gene056064.t1 |
| chr1.1 | exon | 61650088 | 61650374 | 61650088 | ID=MS.gene056064.t1.exon3;Parent=MS.gene056064.t1 |
| chr1.1 | CDS | 61650088 | 61650374 | 61650088 | ID=cds.MS.gene056064.t1;Parent=MS.gene056064.t1 |
| chr1.1 | exon | 61649666 | 61649783 | 61649666 | ID=MS.gene056064.t1.exon4;Parent=MS.gene056064.t1 |
| chr1.1 | CDS | 61649666 | 61649783 | 61649666 | ID=cds.MS.gene056064.t1;Parent=MS.gene056064.t1 |
| Gene Sequence |
| Protein sequence |
