Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056068.t1 | XP_003591148.1 | 93.5 | 168 | 1 | 1 | 1 | 158 | 1 | 168 | 3.50E-81 | 310.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056068.t1 | Q5J907 | 85.1 | 168 | 15 | 1 | 1 | 158 | 1 | 168 | 8.5e-76 | 284.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056068.t1 | G7I8P9 | 93.5 | 168 | 1 | 1 | 1 | 158 | 1 | 168 | 2.5e-81 | 310.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049293 | MS.gene056068 | -0.83365 | 4.72E-56 | -1.69E-46 |
| MS.gene053340 | MS.gene056068 | 0.809429 | 1.90E-50 | -1.69E-46 |
| MS.gene056068 | MS.gene060879 | 0.801271 | 9.74E-49 | -1.69E-46 |
| MS.gene056068 | MS.gene063247 | 0.809992 | 1.44E-50 | -1.69E-46 |
| MS.gene056068 | MS.gene064845 | 0.83013 | 3.49E-55 | -1.69E-46 |
| MS.gene056068 | MS.gene064846 | 0.833035 | 6.72E-56 | -1.69E-46 |
| MS.gene056068 | MS.gene065085 | 0.802662 | 5.04E-49 | -1.69E-46 |
| MS.gene056068 | MS.gene068350 | 0.820362 | 7.14E-53 | -1.69E-46 |
| MS.gene056068 | MS.gene070011 | 0.806063 | 9.87E-50 | -1.69E-46 |
| MS.gene056068 | MS.gene27134 | 0.822875 | 1.87E-53 | -1.69E-46 |
| MS.gene056068 | MS.gene28980 | 0.801352 | 9.38E-49 | -1.69E-46 |
| MS.gene056068 | MS.gene33651 | 0.831775 | 1.38E-55 | -1.69E-46 |
| MS.gene056068 | MS.gene35530 | 0.819368 | 1.21E-52 | -1.69E-46 |
| MS.gene056068 | MS.gene36229 | 0.801196 | 1.01E-48 | -1.69E-46 |
| MS.gene056068 | MS.gene36231 | 0.804659 | 1.94E-49 | -1.69E-46 |
| MS.gene056068 | MS.gene39376 | -0.820578 | 6.37E-53 | -1.69E-46 |
| MS.gene056068 | MS.gene39695 | -0.826351 | 2.84E-54 | -1.69E-46 |
| MS.gene056068 | MS.gene40320 | 0.81371 | 2.23E-51 | -1.69E-46 |
| MS.gene056068 | MS.gene40838 | 0.903146 | 4.69E-79 | -1.69E-46 |
| MS.gene056068 | MS.gene40839 | 0.837944 | 3.85E-57 | -1.69E-46 |
| MS.gene056068 | MS.gene40880 | 0.812206 | 4.76E-51 | -1.69E-46 |
| MS.gene056068 | MS.gene40882 | 0.887979 | 8.87E-73 | -1.69E-46 |
| MS.gene056068 | MS.gene43215 | -0.824279 | 8.80E-54 | -1.69E-46 |
| MS.gene056068 | MS.gene44131 | 0.838611 | 2.59E-57 | -1.69E-46 |
| MS.gene056068 | MS.gene44132 | 0.804731 | 1.88E-49 | -1.69E-46 |
| MS.gene056068 | MS.gene44134 | 0.968772 | 3.73E-129 | -1.69E-46 |
| MS.gene056068 | MS.gene44407 | -0.801484 | 8.81E-49 | -1.69E-46 |
| MS.gene056068 | MS.gene52808 | 0.809675 | 1.68E-50 | -1.69E-46 |
| MS.gene056068 | MS.gene59540 | 0.839418 | 1.60E-57 | -1.69E-46 |
| MS.gene056068 | MS.gene62887 | -0.822884 | 1.87E-53 | -1.69E-46 |
| MS.gene056068 | MS.gene67179 | 0.806294 | 8.82E-50 | -1.69E-46 |
| MS.gene056068 | MS.gene68654 | 0.803091 | 4.11E-49 | -1.69E-46 |
| MS.gene056068 | MS.gene72620 | 0.802993 | 4.31E-49 | -1.69E-46 |
| MS.gene056068 | MS.gene72621 | 0.801029 | 1.09E-48 | -1.69E-46 |
| MS.gene056068 | MS.gene85978 | 0.82635 | 2.85E-54 | -1.69E-46 |
| MS.gene056068 | MS.gene89049 | 0.8113 | 7.50E-51 | -1.69E-46 |
| MS.gene056068 | MS.gene94906 | 0.815084 | 1.11E-51 | -1.69E-46 |
| MS.gene056068 | MS.gene95676 | 0.802086 | 6.63E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056068.t1 | MTR_1g083350 | 93.452 | 168 | 1 | 1 | 1 | 158 | 1 | 168 | 7.90e-111 | 312 |
| MS.gene056068.t1 | MTR_1g083380 | 92.857 | 168 | 2 | 1 | 1 | 158 | 1 | 168 | 8.27e-110 | 309 |
| MS.gene056068.t1 | MTR_2g436620 | 80.952 | 168 | 21 | 2 | 1 | 158 | 1 | 167 | 5.91e-93 | 267 |
| MS.gene056068.t1 | MTR_1g083340 | 85.350 | 157 | 3 | 2 | 1 | 137 | 1 | 157 | 6.19e-88 | 254 |
| MS.gene056068.t1 | MTR_6g071090 | 75.776 | 161 | 28 | 2 | 1 | 151 | 1 | 160 | 2.21e-80 | 235 |
| MS.gene056068.t1 | MTR_2g436620 | 78.169 | 142 | 20 | 2 | 27 | 158 | 1 | 141 | 1.42e-73 | 217 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056068.t1 | AT3G16640 | 73.214 | 168 | 35 | 1 | 1 | 158 | 1 | 168 | 4.13e-86 | 249 |
| MS.gene056068.t1 | AT3G05540 | 76.331 | 169 | 28 | 3 | 1 | 158 | 1 | 168 | 1.46e-79 | 233 |
Find 36 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGTAGGTCTTTGAGTTT+AGG | 0.257674 | 1.4:+67452863 | None:intergenic |
| GTTTACCAGGATCTTCTTAC+AGG | 0.263960 | 1.4:-67453980 | MS.gene056068:intron |
| ATTGTAGGTCTTTGAGTTTA+GGG | 0.290821 | 1.4:+67452864 | None:intergenic |
| CTACTTTGCTTATGGCTTGA+AGG | 0.363173 | 1.4:-67452441 | MS.gene056068:CDS |
| TCCATTCTCAATTTCCTTGT+AGG | 0.365251 | 1.4:+67453296 | None:intergenic |
| GATGAAACACATACAATTGT+AGG | 0.393371 | 1.4:+67452849 | None:intergenic |
| TGCAACCATGCTTGTTTACC+AGG | 0.395604 | 1.4:-67453993 | None:intergenic |
| AATTGAGAATGGAATGCTTT+GGG | 0.401755 | 1.4:-67453286 | MS.gene056068:CDS |
| CCATTCTCAATTTCCTTGTA+GGG | 0.404442 | 1.4:+67453297 | None:intergenic |
| AATTGCTTCTTATCAAAAGC+TGG | 0.428621 | 1.4:+67452992 | None:intergenic |
| GAATGGAATGCTTTGGGAAG+TGG | 0.450476 | 1.4:-67453280 | MS.gene056068:CDS |
| TAAGCAAAGTAGAGAAAAGT+TGG | 0.453692 | 1.4:+67452452 | None:intergenic |
| AAATTGAGAATGGAATGCTT+TGG | 0.455334 | 1.4:-67453287 | MS.gene056068:CDS |
| CCTTGTGTTTGCTTACTACA+AGG | 0.455642 | 1.4:-67452489 | MS.gene056068:CDS |
| CCCTACAAGGAAATTGAGAA+TGG | 0.477742 | 1.4:-67453297 | MS.gene056068:CDS |
| TATTTGCAGTGGGTTGTTCA+AGG | 0.483236 | 1.4:-67453136 | MS.gene056068:intron |
| CTCTGACTCATTCCCCTACA+AGG | 0.486361 | 1.4:-67453310 | MS.gene056068:CDS |
| GGTCTTTGAGTTTAGGGAGA+AGG | 0.500494 | 1.4:+67452870 | None:intergenic |
| GGAGCAGTGGATGTGAATAT+TGG | 0.501116 | 1.4:-67453115 | MS.gene056068:CDS |
| TTATACCTGTAAGAAGATCC+TGG | 0.509601 | 1.4:+67453975 | None:intergenic |
| GGTGCTAATCCTTCTGCTGA+GGG | 0.511283 | 1.4:-67453094 | MS.gene056068:CDS |
| GCTTTGGGAAGTGGAAGGAA+AGG | 0.531642 | 1.4:-67453271 | MS.gene056068:intron |
| GTGTTTGCTTACTACAAGGA+TGG | 0.538874 | 1.4:-67452485 | MS.gene056068:CDS |
| CATTCTCAATTTCCTTGTAG+GGG | 0.549656 | 1.4:+67453298 | None:intergenic |
| TGGTGCTAATCCTTCTGCTG+AGG | 0.557106 | 1.4:-67453095 | MS.gene056068:CDS |
| TCGTCTCCACCCTCAGCAGA+AGG | 0.563383 | 1.4:+67453085 | None:intergenic |
| GGGGAGAGCATGCATGATGA+TGG | 0.565967 | 1.4:-67452515 | MS.gene056068:CDS |
| GCTAATCCTTCTGCTGAGGG+TGG | 0.579304 | 1.4:-67453091 | MS.gene056068:CDS |
| TTCTGCTGAGGGTGGAGACG+AGG | 0.580750 | 1.4:-67453083 | MS.gene056068:CDS |
| AAGATCCTGGTAAACAAGCA+TGG | 0.602746 | 1.4:+67453988 | None:intergenic |
| GTAGAGAAAAGTTGGATCAG+TGG | 0.605758 | 1.4:+67452460 | None:intergenic |
| GAGGGTGGAGACGAGGATGA+TGG | 0.616662 | 1.4:-67453076 | MS.gene056068:CDS |
| CCTTGTAGTAAGCAAACACA+AGG | 0.635355 | 1.4:+67452489 | None:intergenic |
| GTGGGTTGTTCAAGGAGCAG+TGG | 0.636439 | 1.4:-67453128 | MS.gene056068:CDS |
| GGAATGCTTTGGGAAGTGGA+AGG | 0.659950 | 1.4:-67453276 | MS.gene056068:CDS |
| CGATGATCAAGCTGTCAAAG+TGG | 0.698235 | 1.4:-67453050 | MS.gene056068:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTATGAACATATATT+TGG | + | chr1.4:67453228-67453247 | None:intergenic | 10.0% |
| !! | TAAACTTAATAAAACCAAAA+AGG | + | chr1.4:67453602-67453621 | None:intergenic | 15.0% |
| !!! | AAAATTTTGATAAAACTTGT+TGG | - | chr1.4:67452801-67452820 | MS.gene056068:intron | 15.0% |
| !!! | AACAAGTTTTATCAAAATTT+TGG | + | chr1.4:67452802-67452821 | None:intergenic | 15.0% |
| !!! | AATTATTTAAAACCAAAATG+AGG | + | chr1.4:67452609-67452628 | None:intergenic | 15.0% |
| !!! | ATATTTAAGATTATTGCTTT+TGG | - | chr1.4:67453007-67453026 | MS.gene056068:intron | 15.0% |
| !! | AAAAAAATCTCAAAGATGAA+AGG | + | chr1.4:67452467-67452486 | None:intergenic | 20.0% |
| !! | AATCAGTTAGGATTATTTAT+TGG | + | chr1.4:67453849-67453868 | None:intergenic | 20.0% |
| !!! | AAACTTCTCTGTTTTATATA+TGG | + | chr1.4:67452638-67452657 | None:intergenic | 20.0% |
| !!! | AACTTCTCTGTTTTATATAT+GGG | + | chr1.4:67452637-67452656 | None:intergenic | 20.0% |
| !!! | TATAAAACAGAGAAGTTTTA+TGG | - | chr1.4:67452640-67452659 | MS.gene056068:intron | 20.0% |
| ! | AAAATCCACAATCAAGTATT+AGG | + | chr1.4:67452932-67452951 | None:intergenic | 25.0% |
| ! | AAATATTCATGTAACACTTG+TGG | + | chr1.4:67452883-67452902 | None:intergenic | 25.0% |
| ! | GAAAAACAAACGAAAACTAA+AGG | + | chr1.4:67452490-67452509 | None:intergenic | 25.0% |
| ! | GATTAATTACTCAATCAGTT+AGG | + | chr1.4:67453861-67453880 | None:intergenic | 25.0% |
| ! | TAATGTTGCTAACTTTACTT+TGG | - | chr1.4:67453051-67453070 | MS.gene056068:CDS | 25.0% |
| !! | CAAAAAACAGAGAAGTTTTA+AGG | - | chr1.4:67452689-67452708 | MS.gene056068:intron | 25.0% |
| !!! | AATCAATGTTACAGTTTTGT+TGG | - | chr1.4:67453877-67453896 | MS.gene056068:intron | 25.0% |
| !!! | ATCAATGTTACAGTTTTGTT+GGG | - | chr1.4:67453878-67453897 | MS.gene056068:intron | 25.0% |
| !!! | CTTAAAACTTCTCTGTTTTT+TGG | + | chr1.4:67452691-67452710 | None:intergenic | 25.0% |
| !!! | GATTGTGGATTTTATTTTCT+TGG | - | chr1.4:67452939-67452958 | MS.gene056068:CDS | 25.0% |
| AAATTGAGAATGGAATGCTT+TGG | - | chr1.4:67453126-67453145 | MS.gene056068:CDS | 30.0% | |
| AATTGAGAATGGAATGCTTT+GGG | - | chr1.4:67453127-67453146 | MS.gene056068:CDS | 30.0% | |
| AATTGCTTCTTATCAAAAGC+TGG | + | chr1.4:67453424-67453443 | None:intergenic | 30.0% | |
| CACAATCAAGTATTAGGTTA+GGG | + | chr1.4:67452926-67452945 | None:intergenic | 30.0% | |
| CACATCACACAATAAACTTT+AGG | + | chr1.4:67453255-67453274 | None:intergenic | 30.0% | |
| GATGAAACACATACAATTGT+AGG | + | chr1.4:67453567-67453586 | None:intergenic | 30.0% | |
| GGTTTAACCTTTAGATTTGA+AGG | - | chr1.4:67452752-67452771 | MS.gene056068:intron | 30.0% | |
| GTTAGGGTAATCATGTTTAA+GGG | + | chr1.4:67452910-67452929 | None:intergenic | 30.0% | |
| TAAGCAAAGTAGAGAAAAGT+TGG | + | chr1.4:67453964-67453983 | None:intergenic | 30.0% | |
| TCCAATTATGCACTAATTAC+AGG | + | chr1.4:67452563-67452582 | None:intergenic | 30.0% | |
| TCCTGTAATTAGTGCATAAT+TGG | - | chr1.4:67452559-67452578 | MS.gene056068:intron | 30.0% | |
| TTGATATTGTTGACACTTTC+AGG | - | chr1.4:67453386-67453405 | MS.gene056068:intron | 30.0% | |
| TTTCACTCCTTCAAATCTAA+AGG | + | chr1.4:67452762-67452781 | None:intergenic | 30.0% | |
| ! | AATTGTAGGTCTTTGAGTTT+AGG | + | chr1.4:67453553-67453572 | None:intergenic | 30.0% |
| ! | ACTTTTCTCTACTTTGCTTA+TGG | - | chr1.4:67453964-67453983 | MS.gene056068:intron | 30.0% |
| ! | ATTGTAGGTCTTTGAGTTTA+GGG | + | chr1.4:67453552-67453571 | None:intergenic | 30.0% |
| ! | GTTTCTCATAAACCTCATTT+TGG | - | chr1.4:67452594-67452613 | MS.gene056068:intron | 30.0% |
| ! | TCACTATCTTTCATCCTTTT+TGG | - | chr1.4:67453585-67453604 | MS.gene056068:intron | 30.0% |
| !! | ATTTTCTTGGTTACTGATTG+TGG | - | chr1.4:67452952-67452971 | MS.gene056068:CDS | 30.0% |
| !!! | AAAGTTGTTGTTTTTGTGAC+AGG | - | chr1.4:67452833-67452852 | MS.gene056068:intron | 30.0% |
| !!! | AAGTTGTTGTTTTTGTGACA+GGG | - | chr1.4:67452834-67452853 | MS.gene056068:intron | 30.0% |
| !!! | AGAATTTTTCAAGACACAGT+TGG | + | chr1.4:67453795-67453814 | None:intergenic | 30.0% |
| !!! | TCAATGTTACAGTTTTGTTG+GGG | - | chr1.4:67453879-67453898 | MS.gene056068:intron | 30.0% |
| CATTCTCAATTTCCTTGTAG+GGG | + | chr1.4:67453118-67453137 | None:intergenic | 35.0% | |
| CCACAATCAAGTATTAGGTT+AGG | + | chr1.4:67452927-67452946 | None:intergenic | 35.0% | |
| CCATTCTCAATTTCCTTGTA+GGG | + | chr1.4:67453119-67453138 | None:intergenic | 35.0% | |
| CCTAACCTAATACTTGATTG+TGG | - | chr1.4:67452924-67452943 | MS.gene056068:CDS | 35.0% | |
| GGTTAGGGTAATCATGTTTA+AGG | + | chr1.4:67452911-67452930 | None:intergenic | 35.0% | |
| GTGATGTGATTATTTGCAGT+GGG | - | chr1.4:67453267-67453286 | MS.gene056068:intron | 35.0% | |
| TCCATTCTCAATTTCCTTGT+AGG | + | chr1.4:67453120-67453139 | None:intergenic | 35.0% | |
| TGTGATGTGATTATTTGCAG+TGG | - | chr1.4:67453266-67453285 | MS.gene056068:intron | 35.0% | |
| TTATACCTGTAAGAAGATCC+TGG | + | chr1.4:67452441-67452460 | None:intergenic | 35.0% | |
| ! | AGTTTTCTGTTTGTGTTCTG+TGG | - | chr1.4:67452731-67452750 | MS.gene056068:intron | 35.0% |
| ! | CTTTGGCGATGAATTTTTCT+AGG | - | chr1.4:67453068-67453087 | MS.gene056068:CDS | 35.0% |
| !! | TTGAACAACTCTTGCTTTTC+TGG | + | chr1.4:67453496-67453515 | None:intergenic | 35.0% |
| !!! | AGTTGTTGTTTTTGTGACAG+GGG | - | chr1.4:67452835-67452854 | MS.gene056068:intron | 35.0% |
| CCCTACAAGGAAATTGAGAA+TGG | - | chr1.4:67453116-67453135 | MS.gene056068:CDS | 40.0% | |
| CCTTGTAGTAAGCAAACACA+AGG | + | chr1.4:67453927-67453946 | None:intergenic | 40.0% | |
| CCTTGTGTTTGCTTACTACA+AGG | - | chr1.4:67453924-67453943 | MS.gene056068:intron | 40.0% | |
| CTACTTTGCTTATGGCTTGA+AGG | - | chr1.4:67453972-67453991 | MS.gene056068:intron | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | - | chr1.4:67453719-67453738 | MS.gene056068:intron | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | - | chr1.4:67453716-67453735 | MS.gene056068:intron | 40.0% | |
| GTAGAGAAAAGTTGGATCAG+TGG | + | chr1.4:67453956-67453975 | None:intergenic | 40.0% | |
| GTGTTTGCTTACTACAAGGA+TGG | - | chr1.4:67453928-67453947 | MS.gene056068:intron | 40.0% | |
| GTTTACCAGGATCTTCTTAC+AGG | - | chr1.4:67452433-67452452 | MS.gene056068:CDS | 40.0% | |
| TGTGGCTGAAAAATAGGAAG+TGG | - | chr1.4:67453742-67453761 | MS.gene056068:intron | 40.0% | |
| !! | TATTTGCAGTGGGTTGTTCA+AGG | - | chr1.4:67453277-67453296 | MS.gene056068:CDS | 40.0% |
| CGATGATCAAGCTGTCAAAG+TGG | - | chr1.4:67453363-67453382 | MS.gene056068:intron | 45.0% | |
| GGAGCAGTGGATGTGAATAT+TGG | - | chr1.4:67453298-67453317 | MS.gene056068:CDS | 45.0% | |
| TGTTGACACTTTCAGGCTTC+AGG | - | chr1.4:67453393-67453412 | MS.gene056068:intron | 45.0% | |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | - | chr1.4:67453736-67453755 | MS.gene056068:intron | 45.0% |
| ! | GGTCTTTGAGTTTAGGGAGA+AGG | + | chr1.4:67453546-67453565 | None:intergenic | 45.0% |
| !! | GAATGGAATGCTTTGGGAAG+TGG | - | chr1.4:67453133-67453152 | MS.gene056068:intron | 45.0% |
| AGCCACACCTCCTTGAATTG+TGG | + | chr1.4:67453729-67453748 | None:intergenic | 50.0% | |
| CTCTGACTCATTCCCCTACA+AGG | - | chr1.4:67453103-67453122 | MS.gene056068:CDS | 50.0% | |
| GGGAAGTGGAAGGAAAGGTT+TGG | - | chr1.4:67453147-67453166 | MS.gene056068:intron | 50.0% | |
| GGTGCTAATCCTTCTGCTGA+GGG | - | chr1.4:67453319-67453338 | MS.gene056068:CDS | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | - | chr1.4:67453724-67453743 | MS.gene056068:intron | 50.0% | |
| ! | TGGTGCTAATCCTTCTGCTG+AGG | - | chr1.4:67453318-67453337 | MS.gene056068:CDS | 50.0% |
| !! | GCTTTGGGAAGTGGAAGGAA+AGG | - | chr1.4:67453142-67453161 | MS.gene056068:intron | 50.0% |
| !! | GGAATGCTTTGGGAAGTGGA+AGG | - | chr1.4:67453137-67453156 | MS.gene056068:intron | 50.0% |
| GCTAATCCTTCTGCTGAGGG+TGG | - | chr1.4:67453322-67453341 | MS.gene056068:CDS | 55.0% | |
| ! | GGGGAGAGCATGCATGATGA+TGG | - | chr1.4:67453898-67453917 | MS.gene056068:intron | 55.0% |
| ! | GTGGGTTGTTCAAGGAGCAG+TGG | - | chr1.4:67453285-67453304 | MS.gene056068:CDS | 55.0% |
| GAGGGTGGAGACGAGGATGA+TGG | - | chr1.4:67453337-67453356 | MS.gene056068:intron | 60.0% | |
| TCGTCTCCACCCTCAGCAGA+AGG | + | chr1.4:67453331-67453350 | None:intergenic | 60.0% | |
| TTCTGCTGAGGGTGGAGACG+AGG | - | chr1.4:67453330-67453349 | MS.gene056068:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 67452427 | 67454008 | 67452427 | ID=MS.gene056068 |
| chr1.4 | mRNA | 67452427 | 67454008 | 67452427 | ID=MS.gene056068.t1;Parent=MS.gene056068 |
| chr1.4 | exon | 67453981 | 67454008 | 67453981 | ID=MS.gene056068.t1.exon1;Parent=MS.gene056068.t1 |
| chr1.4 | CDS | 67453981 | 67454008 | 67453981 | ID=cds.MS.gene056068.t1;Parent=MS.gene056068.t1 |
| chr1.4 | exon | 67453272 | 67453345 | 67453272 | ID=MS.gene056068.t1.exon2;Parent=MS.gene056068.t1 |
| chr1.4 | CDS | 67453272 | 67453345 | 67453272 | ID=cds.MS.gene056068.t1;Parent=MS.gene056068.t1 |
| chr1.4 | exon | 67453051 | 67453149 | 67453051 | ID=MS.gene056068.t1.exon3;Parent=MS.gene056068.t1 |
| chr1.4 | CDS | 67453051 | 67453149 | 67453051 | ID=cds.MS.gene056068.t1;Parent=MS.gene056068.t1 |
| chr1.4 | exon | 67452863 | 67453020 | 67452863 | ID=MS.gene056068.t1.exon4;Parent=MS.gene056068.t1 |
| chr1.4 | CDS | 67452863 | 67453020 | 67452863 | ID=cds.MS.gene056068.t1;Parent=MS.gene056068.t1 |
| chr1.4 | exon | 67452427 | 67452544 | 67452427 | ID=MS.gene056068.t1.exon5;Parent=MS.gene056068.t1 |
| chr1.4 | CDS | 67452427 | 67452544 | 67452427 | ID=cds.MS.gene056068.t1;Parent=MS.gene056068.t1 |
| Gene Sequence |
| Protein sequence |
