Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44165.t1 | ABD28355.2 | 99 | 208 | 2 | 0 | 1 | 208 | 1 | 208 | 9.30E-113 | 417.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44165.t1 | Q84J78 | 63.5 | 211 | 66 | 1 | 1 | 211 | 1 | 200 | 8.3e-70 | 265.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44165.t1 | Q2HW28 | 99.0 | 208 | 2 | 0 | 1 | 208 | 1 | 208 | 6.7e-113 | 417.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049824 | MS.gene44165 | 0.808881 | 2.49E-50 | -1.69E-46 |
MS.gene049825 | MS.gene44165 | 0.836435 | 9.38E-57 | -1.69E-46 |
MS.gene049873 | MS.gene44165 | 0.834917 | 2.27E-56 | -1.69E-46 |
MS.gene050277 | MS.gene44165 | 0.823475 | 1.36E-53 | -1.69E-46 |
MS.gene050303 | MS.gene44165 | 0.811463 | 6.92E-51 | -1.69E-46 |
MS.gene051330 | MS.gene44165 | 0.808813 | 2.58E-50 | -1.69E-46 |
MS.gene052302 | MS.gene44165 | 0.805194 | 1.50E-49 | -1.69E-46 |
MS.gene052376 | MS.gene44165 | 0.814295 | 1.66E-51 | -1.69E-46 |
MS.gene053294 | MS.gene44165 | 0.805102 | 1.57E-49 | -1.69E-46 |
MS.gene055808 | MS.gene44165 | 0.866812 | 2.17E-65 | -1.69E-46 |
MS.gene056091 | MS.gene44165 | 0.923248 | 3.41E-89 | -1.69E-46 |
MS.gene056631 | MS.gene44165 | 0.825994 | 3.46E-54 | -1.69E-46 |
MS.gene057555 | MS.gene44165 | 0.805849 | 1.09E-49 | -1.69E-46 |
MS.gene057705 | MS.gene44165 | 0.806747 | 7.08E-50 | -1.69E-46 |
MS.gene058908 | MS.gene44165 | 0.804267 | 2.34E-49 | -1.69E-46 |
MS.gene058911 | MS.gene44165 | 0.817802 | 2.73E-52 | -1.69E-46 |
MS.gene05953 | MS.gene44165 | 0.813857 | 2.07E-51 | -1.69E-46 |
MS.gene05954 | MS.gene44165 | 0.830017 | 3.72E-55 | -1.69E-46 |
MS.gene06001 | MS.gene44165 | 0.852493 | 4.45E-61 | -1.69E-46 |
MS.gene060429 | MS.gene44165 | 0.838117 | 3.48E-57 | -1.69E-46 |
MS.gene060586 | MS.gene44165 | 0.802857 | 4.60E-49 | -1.69E-46 |
MS.gene060830 | MS.gene44165 | 0.807291 | 5.43E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44165.t1 | MTR_1g083740 | 97.156 | 211 | 6 | 0 | 1 | 211 | 1 | 211 | 1.99e-151 | 427 |
MS.gene44165.t1 | MTR_1g083740 | 97.895 | 190 | 4 | 0 | 1 | 190 | 1 | 190 | 1.07e-137 | 392 |
MS.gene44165.t1 | MTR_1g083730 | 90.000 | 120 | 12 | 0 | 208 | 327 | 30 | 149 | 3.11e-58 | 187 |
MS.gene44165.t1 | MTR_4g111750 | 37.500 | 112 | 57 | 2 | 69 | 174 | 95 | 199 | 9.67e-19 | 85.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44165.t1 | AT4G11060 | 63.507 | 211 | 66 | 1 | 1 | 211 | 1 | 200 | 9.94e-91 | 273 |
MS.gene44165.t1 | AT3G18580 | 37.069 | 116 | 67 | 1 | 81 | 190 | 79 | 194 | 5.83e-23 | 96.7 |
Find 95 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTTATAATGATAGTATTAA+TGG | 0.220262 | 1.3:-59297527 | MS.gene44165:CDS |
GAGGCGAATGACCACTAATT+TGG | 0.240757 | 1.3:+59293086 | None:intergenic |
TAGCATAACACCGCGCTTCT+TGG | 0.262948 | 1.3:+59299082 | None:intergenic |
CCATCCAAAATGAAGAAAAT+TGG | 0.280860 | 1.3:-59293405 | MS.gene44165:CDS |
CTCCTGTACAGAAGATATTA+AGG | 0.303441 | 1.3:-59297826 | MS.gene44165:CDS |
ATTTGTCAAGAAGTCATTTC+TGG | 0.319509 | 1.3:+59292892 | None:intergenic |
AATGCACCTACAACTGGTTT+TGG | 0.321982 | 1.3:+59293339 | None:intergenic |
CATTGTGTTGTCACCAGGTT+TGG | 0.328708 | 1.3:-59293156 | MS.gene44165:CDS |
CAAATGGAGGGCAAGTAAAA+AGG | 0.335761 | 1.3:-59293184 | MS.gene44165:CDS |
TTCTCCAAGTCCACACTACC+TGG | 0.356142 | 1.3:-59292941 | MS.gene44165:CDS |
CGATGCCACTGAGCAGGTTT+AGG | 0.364625 | 1.3:+59297725 | None:intergenic |
ACGAAATCCCCAACCTCTAC+TGG | 0.367940 | 1.3:+59298925 | None:intergenic |
CAGGGAAACTTCGCCTCATC+AGG | 0.382684 | 1.3:-59296083 | MS.gene44165:CDS |
TGGAAAAGAGAAGCATAATA+TGG | 0.387920 | 1.3:-59293385 | MS.gene44165:CDS |
ACCATCTTTACAGTTGGAAC+GGG | 0.406475 | 1.3:-59297788 | MS.gene44165:CDS |
GCAATTATTTGTGGTAAAGT+TGG | 0.434965 | 1.3:-59297854 | MS.gene44165:CDS |
TGTTGATCCCAGTAGAGGTT+GGG | 0.439046 | 1.3:-59298933 | MS.gene44165:CDS |
TACAGAAGATATTAAGGAAT+GGG | 0.441398 | 1.3:-59297820 | MS.gene44165:CDS |
TCACCAGGTTTGGAAAAGTT+AGG | 0.442931 | 1.3:-59293146 | MS.gene44165:CDS |
TCAAAACAGGCAATTATTTG+TGG | 0.443764 | 1.3:-59297863 | MS.gene44165:intron |
TGAGATAATGCACCTACAAC+TGG | 0.447535 | 1.3:+59293333 | None:intergenic |
GAGCGTTGATAAAACTTCCT+TGG | 0.447768 | 1.3:-59296052 | MS.gene44165:CDS |
TAGGATTCCATCCAAATTAG+TGG | 0.450083 | 1.3:-59293097 | MS.gene44165:CDS |
ATAATTTCATTACAGCCAAA+TGG | 0.450477 | 1.3:-59293200 | MS.gene44165:CDS |
TAACCCAGGTAGTGTGGACT+TGG | 0.453113 | 1.3:+59292937 | None:intergenic |
ATGTATGACCAGAGAATTGT+AGG | 0.461425 | 1.3:-59297761 | MS.gene44165:CDS |
CCTTTGATCCTACAATTCTC+TGG | 0.461876 | 1.3:+59297753 | None:intergenic |
TTAGTTCGTGGCGATTGGTT+AGG | 0.465381 | 1.3:-59293116 | MS.gene44165:CDS |
TCACGACGAACGCATATCTC+TGG | 0.465546 | 1.3:+59297488 | None:intergenic |
TTCCTTAATATCTTCTGTAC+AGG | 0.466214 | 1.3:+59297824 | None:intergenic |
AAGGCCCGAGTTACAGCTGC+AGG | 0.468832 | 1.3:-59298957 | MS.gene44165:CDS |
TCAGTCTTCTCTAGTGTCCT+AGG | 0.474261 | 1.3:-59293447 | MS.gene44165:CDS |
GATGAGTTTGATGATTTCCT+TGG | 0.477482 | 1.3:-59298983 | MS.gene44165:CDS |
ATATCTTCTGTACAGGAGCT+TGG | 0.479615 | 1.3:+59297831 | None:intergenic |
TATGAACCAAAACCAGTTGT+AGG | 0.481535 | 1.3:-59293345 | MS.gene44165:CDS |
AGAAGAGCGTCGAAGATGCT+TGG | 0.484612 | 1.3:+59299324 | None:intergenic |
GAGATATGCGTTCGTCGTGA+TGG | 0.485219 | 1.3:-59297485 | MS.gene44165:intron |
GTTGATCCCAGTAGAGGTTG+GGG | 0.487051 | 1.3:-59298932 | MS.gene44165:CDS |
AACACCCTGCAGCTGTAACT+CGG | 0.490793 | 1.3:+59298952 | None:intergenic |
ACTGAGCCGAGTGATGGCTT+TGG | 0.492871 | 1.3:+59293465 | None:intergenic |
CCCCGTTCCAACTGTAAAGA+TGG | 0.496834 | 1.3:+59297787 | None:intergenic |
GAAGGTTAGTTCGTGGCGAT+TGG | 0.504595 | 1.3:-59293121 | MS.gene44165:CDS |
CAGTGATGAGGGAAGCATAA+GGG | 0.505547 | 1.3:-59293493 | MS.gene44165:CDS |
TTGATGATTTCCTTGGTGGA+AGG | 0.507897 | 1.3:-59298976 | MS.gene44165:CDS |
AGTTCTTCAGTGTATGTTGA+GGG | 0.511485 | 1.3:-59297566 | MS.gene44165:CDS |
AGTAGAGGTTGGGGATTTCG+TGG | 0.523166 | 1.3:-59298923 | MS.gene44165:CDS |
ACACCCTGCAGCTGTAACTC+GGG | 0.523237 | 1.3:+59298953 | None:intergenic |
GCGGTGCATAATGAAGTACT+AGG | 0.526504 | 1.3:-59297698 | MS.gene44165:CDS |
CATCTTCGACGCTCTTCTCA+CGG | 0.526813 | 1.3:-59299319 | MS.gene44165:intron |
ATCTTTACAGTTGGAACGGG+GGG | 0.528265 | 1.3:-59297785 | MS.gene44165:CDS |
CGCTCTCTCCACTCCTGATG+AGG | 0.530931 | 1.3:+59296070 | None:intergenic |
CGAAATCCCCAACCTCTACT+GGG | 0.532770 | 1.3:+59298926 | None:intergenic |
CCAGAGAATTGTAGGATCAA+AGG | 0.533594 | 1.3:-59297753 | MS.gene44165:CDS |
GCAATGCGATGCCACTGAGC+AGG | 0.538443 | 1.3:+59297719 | None:intergenic |
AATGTGACCATCTTTACAGT+TGG | 0.540656 | 1.3:-59297794 | MS.gene44165:CDS |
ACAGTGATGAGGGAAGCATA+AGG | 0.547367 | 1.3:-59293494 | MS.gene44165:CDS |
CAAGCACTGGAGCAAGATGA+AGG | 0.551626 | 1.3:-59293294 | MS.gene44165:CDS |
GAGTTTGATGATTTCCTTGG+TGG | 0.553736 | 1.3:-59298980 | MS.gene44165:CDS |
GACCATCTTTACAGTTGGAA+CGG | 0.555814 | 1.3:-59297789 | MS.gene44165:CDS |
CGAATGACCACTAATTTGGA+TGG | 0.556906 | 1.3:+59293090 | None:intergenic |
GTTTGGAAAAGTTAGGAGGA+AGG | 0.560457 | 1.3:-59293139 | MS.gene44165:CDS |
ATTTCATTACAGCCAAATGG+AGG | 0.560823 | 1.3:-59293197 | MS.gene44165:CDS |
GTGTTGATCCCAGTAGAGGT+TGG | 0.561168 | 1.3:-59298934 | MS.gene44165:CDS |
GTACAGAAGATATTAAGGAA+TGG | 0.564034 | 1.3:-59297821 | MS.gene44165:CDS |
GAGAAGACTGAGCCGAGTGA+TGG | 0.564113 | 1.3:+59293459 | None:intergenic |
ACCTGGGTTATGAAACAGAC+AGG | 0.565700 | 1.3:-59292924 | MS.gene44165:CDS |
GGGATTTCGTGGTGTGCACA+AGG | 0.569770 | 1.3:-59298912 | MS.gene44165:intron |
GCCTGTCTGTTTCATAACCC+AGG | 0.570101 | 1.3:+59292923 | None:intergenic |
ACTTTATCATCTTCAACTTG+AGG | 0.570728 | 1.3:+59293067 | None:intergenic |
CAGTTCTTCAGTGTATGTTG+AGG | 0.570927 | 1.3:-59297567 | MS.gene44165:CDS |
TGAAGGAAAGCATAGCAGAA+TGG | 0.571808 | 1.3:-59293277 | MS.gene44165:CDS |
CGGTGCATAATGAAGTACTA+GGG | 0.571828 | 1.3:-59297697 | MS.gene44165:CDS |
TTAGGAGGAAGGTTAGTTCG+TGG | 0.577282 | 1.3:-59293128 | MS.gene44165:CDS |
CCATCTTTACAGTTGGAACG+GGG | 0.580438 | 1.3:-59297787 | MS.gene44165:CDS |
GTTTCATAACCCAGGTAGTG+TGG | 0.582161 | 1.3:+59292931 | None:intergenic |
TTTACGTCTGAAACTGATGC+TGG | 0.584180 | 1.3:-59299052 | MS.gene44165:CDS |
CAGGGTGTTGATCCCAGTAG+AGG | 0.584299 | 1.3:-59298938 | MS.gene44165:CDS |
TGCTCAGTGGCATCGCATTG+CGG | 0.585757 | 1.3:-59297717 | MS.gene44165:CDS |
ATTGCTACTGACAGTGATGA+GGG | 0.591387 | 1.3:-59293504 | MS.gene44165:CDS |
GAACTTACTAAATTCATCCA+AGG | 0.592834 | 1.3:+59296035 | None:intergenic |
TTTCATTACAGCCAAATGGA+GGG | 0.603208 | 1.3:-59293196 | MS.gene44165:CDS |
CCAGGTTTGGAAAAGTTAGG+AGG | 0.604220 | 1.3:-59293143 | MS.gene44165:CDS |
CATTGCTACTGACAGTGATG+AGG | 0.609615 | 1.3:-59293505 | MS.gene44165:CDS |
TCTTTACAGTTGGAACGGGG+GGG | 0.613675 | 1.3:-59297784 | MS.gene44165:CDS |
CATCTTTACAGTTGGAACGG+GGG | 0.616404 | 1.3:-59297786 | MS.gene44165:CDS |
AAACTTCGCCTCATCAGGAG+TGG | 0.617457 | 1.3:-59296078 | MS.gene44165:CDS |
GTGTGGACTTGGAGAACACA+AGG | 0.618597 | 1.3:+59292948 | None:intergenic |
TCTCCAAGTCCACACTACCT+GGG | 0.644051 | 1.3:-59292940 | MS.gene44165:CDS |
AGGCCCGAGTTACAGCTGCA+GGG | 0.654687 | 1.3:-59298956 | MS.gene44165:CDS |
AGCTTCTGTTCCAAGAAGCG+CGG | 0.656924 | 1.3:-59299092 | MS.gene44165:CDS |
GCTAAGCCAAAGCCATCACT+CGG | 0.661060 | 1.3:-59293471 | MS.gene44165:CDS |
GTAACTCGGGCCTTCCACCA+AGG | 0.696325 | 1.3:+59298966 | None:intergenic |
GGTGCATAATGAAGTACTAG+GGG | 0.712926 | 1.3:-59297696 | MS.gene44165:CDS |
ATTTGCCTAAACCTGCTCAG+TGG | 0.717014 | 1.3:-59297730 | MS.gene44165:CDS |
TGTGGACTTGGAGAACACAA+GGG | 0.755126 | 1.3:+59292949 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATAAATAATTTAAAAA+AGG | + | chr1.3:59295476-59295495 | None:intergenic | 0.0% |
!! | AATATATATATATATATATA+TGG | - | chr1.3:59295042-59295061 | MS.gene44165:intron | 0.0% |
!! | ATATATATATATATATATAT+GGG | - | chr1.3:59295043-59295062 | MS.gene44165:intron | 0.0% |
!! | AATTATTTACCAATAAAATA+TGG | + | chr1.3:59298331-59298350 | None:intergenic | 10.0% |
!! | ATCAAACTAAAAATTTAAAA+GGG | - | chr1.3:59298196-59298215 | MS.gene44165:intron | 10.0% |
!! | CCTTTATATATATATATAAA+AGG | + | chr1.3:59295252-59295271 | None:intergenic | 10.0% |
!!! | AAAATTAATAAATTTTGTGT+AGG | - | chr1.3:59296995-59297014 | MS.gene44165:intron | 10.0% |
!!! | AAATACATTAATTTCTTTTA+GGG | + | chr1.3:59298250-59298269 | None:intergenic | 10.0% |
!!! | AAATTTATTAATTTTCAGTA+AGG | + | chr1.3:59296990-59297009 | None:intergenic | 10.0% |
!!! | CCTTTTATATATATATATAA+AGG | - | chr1.3:59295249-59295268 | MS.gene44165:intron | 10.0% |
!!! | TTACTCATTTTATTTAATTT+GGG | - | chr1.3:59295844-59295863 | MS.gene44165:intron | 10.0% |
!!! | TTTACTCATTTTATTTAATT+TGG | - | chr1.3:59295843-59295862 | MS.gene44165:intron | 10.0% |
!!! | TTTATTTTTCTCTTTTTTAT+TGG | + | chr1.3:59298099-59298118 | None:intergenic | 10.0% |
!!! | TTTTGTTGAAATTTAATTAA+GGG | + | chr1.3:59297070-59297089 | None:intergenic | 10.0% |
!! | ATATATCTCAACATAAAATA+AGG | + | chr1.3:59294010-59294029 | None:intergenic | 15.0% |
!! | ATCAGTTTATCTTATATTTA+TGG | - | chr1.3:59296050-59296069 | MS.gene44165:CDS | 15.0% |
!! | GATCAAACTAAAAATTTAAA+AGG | - | chr1.3:59298195-59298214 | MS.gene44165:intron | 15.0% |
!! | GCATAAAATTCAATAATAAA+AGG | + | chr1.3:59295581-59295600 | None:intergenic | 15.0% |
!! | GTTTATAATGATAGTATTAA+TGG | - | chr1.3:59294719-59294738 | MS.gene44165:intron | 15.0% |
!! | TAAAAATAAAAGCTTATGTT+TGG | - | chr1.3:59293538-59293557 | MS.gene44165:intron | 15.0% |
!! | TAATAGTAAATCAATAATGA+AGG | + | chr1.3:59295631-59295650 | None:intergenic | 15.0% |
!! | TCAAACTAAAAATTTAAAAG+GGG | - | chr1.3:59298197-59298216 | MS.gene44165:intron | 15.0% |
!!! | ACTTTTTTTTTTCTTCTTAT+TGG | - | chr1.3:59297427-59297446 | MS.gene44165:intron | 15.0% |
!!! | CAAATACATTAATTTCTTTT+AGG | + | chr1.3:59298251-59298270 | None:intergenic | 15.0% |
!!! | CTTTTGTTGAAATTTAATTA+AGG | + | chr1.3:59297071-59297090 | None:intergenic | 15.0% |
!!! | TACTCATTTTATTTAATTTG+GGG | - | chr1.3:59295845-59295864 | MS.gene44165:intron | 15.0% |
!! | AAAAAGTAAGTGTTTATACA+AGG | - | chr1.3:59294596-59294615 | MS.gene44165:intron | 20.0% |
!! | AAAAGTAAGTGTTTATACAA+GGG | - | chr1.3:59294597-59294616 | MS.gene44165:intron | 20.0% |
!! | AATCATATTAACATTGATGA+TGG | + | chr1.3:59295351-59295370 | None:intergenic | 20.0% |
!! | GAATGTGTGAAAAAAATTAA+CGG | - | chr1.3:59297246-59297265 | MS.gene44165:intron | 20.0% |
!! | GCATAAAAATCTGTAATAAT+TGG | - | chr1.3:59296444-59296463 | MS.gene44165:intron | 20.0% |
!! | TAAAAATCTGTAATAATTGG+AGG | - | chr1.3:59296447-59296466 | MS.gene44165:intron | 20.0% |
!! | TACACATTTACAAAAAAAGT+AGG | + | chr1.3:59296724-59296743 | None:intergenic | 20.0% |
!! | TATATATATAAAGGAACAGA+CGG | - | chr1.3:59295258-59295277 | MS.gene44165:intron | 20.0% |
!! | TATCTTCATAATTATCTTTG+TGG | - | chr1.3:59297209-59297228 | MS.gene44165:intron | 20.0% |
!! | TCACAAAAGTTGTTTAAAAA+TGG | - | chr1.3:59297521-59297540 | MS.gene44165:CDS | 20.0% |
!! | TTGTAATCATTACATCAATA+AGG | + | chr1.3:59296825-59296844 | None:intergenic | 20.0% |
!!! | ATCATATTAACATTGATGAT+GGG | + | chr1.3:59295350-59295369 | None:intergenic | 20.0% |
!!! | ATGAGTATTGGAATTAATTA+AGG | - | chr1.3:59295999-59296018 | MS.gene44165:intron | 20.0% |
!!! | ATGTTGGTCAAATTATTTTT+CGG | + | chr1.3:59294354-59294373 | None:intergenic | 20.0% |
!!! | ATTTTATCAAAACCCTTTTT+TGG | - | chr1.3:59295497-59295516 | MS.gene44165:intron | 20.0% |
!!! | ATTTTATTTCTCAATTTCAG+AGG | - | chr1.3:59296918-59296937 | MS.gene44165:intron | 20.0% |
!!! | ATTTTTATGCTTCCATTAAA+TGG | + | chr1.3:59296434-59296453 | None:intergenic | 20.0% |
!!! | CTTACTTTTTAAAAAGTTGT+TGG | + | chr1.3:59294586-59294605 | None:intergenic | 20.0% |
!!! | CTTTCTTAATTTTCTTGTAT+GGG | - | chr1.3:59296529-59296548 | MS.gene44165:intron | 20.0% |
!!! | GTATTTAGACCATATTTTAT+TGG | - | chr1.3:59298319-59298338 | MS.gene44165:intron | 20.0% |
!!! | TCATTAAAGTTGTTTGATTT+TGG | + | chr1.3:59297405-59297424 | None:intergenic | 20.0% |
!!! | TGGATTGTAAATTTATTTCT+AGG | + | chr1.3:59297834-59297853 | None:intergenic | 20.0% |
!!! | TTTTCCAATTTTCTTCATTT+TGG | + | chr1.3:59298848-59298867 | None:intergenic | 20.0% |
!!! | TTTTTATGCTTCCATTAAAT+GGG | + | chr1.3:59296433-59296452 | None:intergenic | 20.0% |
! | AAAGTAAGTGTTTATACAAG+GGG | - | chr1.3:59294598-59294617 | MS.gene44165:intron | 25.0% |
! | AAATTATCCTAGAGAGTTTA+TGG | - | chr1.3:59293689-59293708 | MS.gene44165:intron | 25.0% |
! | AACGTTAGAAGTTAAATAAG+AGG | + | chr1.3:59293874-59293893 | None:intergenic | 25.0% |
! | AAGACAAGATTAAAGTTTAG+TGG | - | chr1.3:59298584-59298603 | MS.gene44165:intron | 25.0% |
! | AATCATTACATCAATAAGGA+CGG | + | chr1.3:59296821-59296840 | None:intergenic | 25.0% |
! | ACAAACTATCTTCTATTCTA+AGG | + | chr1.3:59294265-59294284 | None:intergenic | 25.0% |
! | ACACCTTCATAAAAATTAGT+TGG | - | chr1.3:59295155-59295174 | MS.gene44165:intron | 25.0% |
! | ACATTTACAAAAAAAGTAGG+CGG | + | chr1.3:59296721-59296740 | None:intergenic | 25.0% |
! | ACGTTAGAAGTTAAATAAGA+GGG | + | chr1.3:59293873-59293892 | None:intergenic | 25.0% |
! | AGAAAGCTTAATAAAGAACA+AGG | + | chr1.3:59294812-59294831 | None:intergenic | 25.0% |
! | ATAACAATAGAGAGAGAAAA+AGG | - | chr1.3:59297453-59297472 | MS.gene44165:intron | 25.0% |
! | ATAATTTCATTACAGCCAAA+TGG | - | chr1.3:59299046-59299065 | MS.gene44165:CDS | 25.0% |
! | CTAAAAGATACCTTCATAAA+AGG | - | chr1.3:59295210-59295229 | MS.gene44165:intron | 25.0% |
! | CTAACGTTATAAAGACTAAT+AGG | - | chr1.3:59293886-59293905 | MS.gene44165:intron | 25.0% |
! | GAAAAATAATTTGACCAACA+TGG | - | chr1.3:59294353-59294372 | MS.gene44165:intron | 25.0% |
! | GATACGTTATCTATTTAAGT+GGG | + | chr1.3:59296033-59296052 | None:intergenic | 25.0% |
! | GCAAAGTTATAACTAAAAAG+TGG | + | chr1.3:59295129-59295148 | None:intergenic | 25.0% |
! | GTAAATGTGTAATGTATGAT+TGG | - | chr1.3:59296733-59296752 | MS.gene44165:intron | 25.0% |
! | GTTGAAATTTAATTAAGGGT+TGG | + | chr1.3:59297066-59297085 | None:intergenic | 25.0% |
! | TAAGTTAATCACCTACTATA+TGG | - | chr1.3:59298360-59298379 | MS.gene44165:intron | 25.0% |
! | TACAGAAGATATTAAGGAAT+GGG | - | chr1.3:59294426-59294445 | MS.gene44165:intron | 25.0% |
! | TGAATAAGTAGAATCAATTC+TGG | - | chr1.3:59294183-59294202 | MS.gene44165:intron | 25.0% |
! | TGATACGTTATCTATTTAAG+TGG | + | chr1.3:59296034-59296053 | None:intergenic | 25.0% |
! | TTCAAAAAGTTATCACAAAG+TGG | + | chr1.3:59297946-59297965 | None:intergenic | 25.0% |
! | TTCAACTATTATTTGAACTG+TGG | + | chr1.3:59295725-59295744 | None:intergenic | 25.0% |
! | TTTACATCAATGAAATAGTG+TGG | - | chr1.3:59296857-59296876 | MS.gene44165:intron | 25.0% |
!! | ACACCAACTAATTTTTATGA+AGG | + | chr1.3:59295161-59295180 | None:intergenic | 25.0% |
!! | CAACGTCTGAAAATTTTATT+GGG | - | chr1.3:59298997-59299016 | MS.gene44165:CDS | 25.0% |
!! | GCTTTCTTAATTTTCTTGTA+TGG | - | chr1.3:59296528-59296547 | MS.gene44165:intron | 25.0% |
!! | GTTACAATTTTCATGAGTAT+TGG | - | chr1.3:59295987-59296006 | MS.gene44165:intron | 25.0% |
!! | TAGTATTTTGTGTTCTTATC+TGG | + | chr1.3:59297679-59297698 | None:intergenic | 25.0% |
!! | TTTATTAAGCTTTCTGAGAA+AGG | - | chr1.3:59294817-59294836 | MS.gene44165:intron | 25.0% |
!!! | AAAAGTCGAGGAAATTTTTT+AGG | + | chr1.3:59297291-59297310 | None:intergenic | 25.0% |
!!! | ACATTGCTTATTTTTATCTC+TGG | - | chr1.3:59295787-59295806 | MS.gene44165:intron | 25.0% |
!!! | CATTGCTTATTTTTATCTCT+GGG | - | chr1.3:59295788-59295807 | MS.gene44165:intron | 25.0% |
!!! | CTTATTTTCATCGGAATAAA+AGG | - | chr1.3:59297733-59297752 | MS.gene44165:CDS | 25.0% |
!!! | GTTGATTGGTTTTTATTACT+GGG | - | chr1.3:59293368-59293387 | MS.gene44165:CDS | 25.0% |
!!! | TAACCTAATAAAAGGCATTA+CGG | + | chr1.3:59294907-59294926 | None:intergenic | 25.0% |
!!! | TGGTTATCTCTTATTTTCAT+CGG | - | chr1.3:59297724-59297743 | MS.gene44165:CDS | 25.0% |
!!! | TGTTGATTGGTTTTTATTAC+TGG | - | chr1.3:59293367-59293386 | MS.gene44165:CDS | 25.0% |
!!! | TGTTGGTCAAATTATTTTTC+GGG | + | chr1.3:59294353-59294372 | None:intergenic | 25.0% |
!!! | TTGAAATGACCCATTTTTTA+GGG | + | chr1.3:59298175-59298194 | None:intergenic | 25.0% |
!!! | TTTTTATTACTGGGTTTTGT+TGG | - | chr1.3:59293377-59293396 | MS.gene44165:CDS | 25.0% |
!!! | TTTTTCATTTCTAGTTTCAC+TGG | - | chr1.3:59293012-59293031 | MS.gene44165:CDS | 25.0% |
AAAAATACCTAGACATACCA+AGG | - | chr1.3:59297791-59297810 | MS.gene44165:CDS | 30.0% | |
AAAACCCAGACAAAAAAATG+GGG | + | chr1.3:59294943-59294962 | None:intergenic | 30.0% | |
AAAAGGTTTCACCATATAGT+AGG | + | chr1.3:59298374-59298393 | None:intergenic | 30.0% | |
AAACTTTCTTTGCATCATTG+TGG | + | chr1.3:59298701-59298720 | None:intergenic | 30.0% | |
AATAGAAGCTAATTTCAACC+TGG | + | chr1.3:59293831-59293850 | None:intergenic | 30.0% | |
AATGTGACAATGAAAATCCT+TGG | + | chr1.3:59297811-59297830 | None:intergenic | 30.0% | |
ACACGACAAAATGTCTTTAA+GGG | + | chr1.3:59297868-59297887 | None:intergenic | 30.0% | |
ACATACTAAAGTGACTGAAA+AGG | + | chr1.3:59296277-59296296 | None:intergenic | 30.0% | |
ACTGACTAATAAATTCATGC+TGG | - | chr1.3:59296377-59296396 | MS.gene44165:intron | 30.0% | |
ACTTTATCATCTTCAACTTG+AGG | + | chr1.3:59299182-59299201 | None:intergenic | 30.0% | |
AGTAGGTGATTAACTTATGT+AGG | + | chr1.3:59298357-59298376 | None:intergenic | 30.0% | |
ATAGAAGCTAATTTCAACCT+GGG | + | chr1.3:59293830-59293849 | None:intergenic | 30.0% | |
CAAAACCCAGACAAAAAAAT+GGG | + | chr1.3:59294944-59294963 | None:intergenic | 30.0% | |
CATTTACAAAAAAAGTAGGC+GGG | + | chr1.3:59296720-59296739 | None:intergenic | 30.0% | |
CCAATAGAACTCCAAAAATA+CGG | + | chr1.3:59296309-59296328 | None:intergenic | 30.0% | |
CCATCCAAAATGAAGAAAAT+TGG | - | chr1.3:59298841-59298860 | MS.gene44165:intron | 30.0% | |
CTTCATATGTCTCCAAAAAA+GGG | + | chr1.3:59295512-59295531 | None:intergenic | 30.0% | |
GAACTTACTAAATTCATCCA+AGG | + | chr1.3:59296214-59296233 | None:intergenic | 30.0% | |
GATATTTGAACAACTGTTTG+AGG | + | chr1.3:59298138-59298157 | None:intergenic | 30.0% | |
GATGCTTCTAACCTAATAAA+AGG | + | chr1.3:59294915-59294934 | None:intergenic | 30.0% | |
GATTAGTACGATCATATTTG+AGG | + | chr1.3:59296604-59296623 | None:intergenic | 30.0% | |
GCAATTATTTGTGGTAAAGT+TGG | - | chr1.3:59294392-59294411 | MS.gene44165:intron | 30.0% | |
GTACAGAAGATATTAAGGAA+TGG | - | chr1.3:59294425-59294444 | MS.gene44165:intron | 30.0% | |
GTAGGTGATTAACTTATGTA+GGG | + | chr1.3:59298356-59298375 | None:intergenic | 30.0% | |
GTGTGAAAAAAATTAACGGA+CGG | - | chr1.3:59297250-59297269 | MS.gene44165:intron | 30.0% | |
TAACATCTCAATAGAAGCAA+AGG | + | chr1.3:59294315-59294334 | None:intergenic | 30.0% | |
TATAGTTATTTGTGATCGAG+TGG | + | chr1.3:59298528-59298547 | None:intergenic | 30.0% | |
TCAAAACAGGCAATTATTTG+TGG | - | chr1.3:59294383-59294402 | MS.gene44165:intron | 30.0% | |
TGCAAAAAAAGGATTCTCAT+GGG | - | chr1.3:59299261-59299280 | MS.gene44165:intron | 30.0% | |
TGTGCAAAGAATACATGTTT+GGG | + | chr1.3:59295920-59295939 | None:intergenic | 30.0% | |
TTAACTTCTAGTCTATGGAA+TGG | + | chr1.3:59293969-59293988 | None:intergenic | 30.0% | |
TTCCTTAATATCTTCTGTAC+AGG | + | chr1.3:59294425-59294444 | None:intergenic | 30.0% | |
TTCGATTAACTTCTAGTCTA+TGG | + | chr1.3:59293974-59293993 | None:intergenic | 30.0% | |
! | AACACAAAATACTACGCTTT+TGG | - | chr1.3:59297685-59297704 | MS.gene44165:CDS | 30.0% |
! | ACATGAGTTTTCATCTTTCT+GGG | - | chr1.3:59297573-59297592 | MS.gene44165:intron | 30.0% |
! | ATTCAAACTCGTAAAAGTAC+TGG | + | chr1.3:59294168-59294187 | None:intergenic | 30.0% |
! | CATATGAAGGTATGCATTTA+AGG | - | chr1.3:59295523-59295542 | MS.gene44165:intron | 30.0% |
! | CATTTTGTCAAACACTTGTT+AGG | - | chr1.3:59293037-59293056 | MS.gene44165:CDS | 30.0% |
! | CCAATTTTCTTCATTTTGGA+TGG | + | chr1.3:59298844-59298863 | None:intergenic | 30.0% |
! | GAGTATTTTGTGTTCTTGAT+TGG | - | chr1.3:59297888-59297907 | MS.gene44165:intron | 30.0% |
! | GCAACGTCTGAAAATTTTAT+TGG | - | chr1.3:59298996-59299015 | MS.gene44165:CDS | 30.0% |
! | GCCTTTTTACCCTAAAAAAT+GGG | - | chr1.3:59298163-59298182 | MS.gene44165:intron | 30.0% |
! | TATCCGTAATGCCTTTTATT+AGG | - | chr1.3:59294901-59294920 | MS.gene44165:intron | 30.0% |
! | TGATTTTATCTTGGTGAAGA+GGG | - | chr1.3:59295947-59295966 | MS.gene44165:intron | 30.0% |
! | TGCAAATAGTAACACGTTTT+AGG | - | chr1.3:59296248-59296267 | MS.gene44165:intron | 30.0% |
! | TGGAAAAGAGAAGCATAATA+TGG | - | chr1.3:59298861-59298880 | MS.gene44165:intron | 30.0% |
! | TTAATTTTCTTGTATGGGAG+AGG | - | chr1.3:59296534-59296553 | MS.gene44165:intron | 30.0% |
! | TTCTCAATTTCAGAGGTATA+GGG | - | chr1.3:59296925-59296944 | MS.gene44165:intron | 30.0% |
! | TTTCTCAATTTCAGAGGTAT+AGG | - | chr1.3:59296924-59296943 | MS.gene44165:intron | 30.0% |
!! | GTGAATATCTTTTGTTTCCT+AGG | + | chr1.3:59298819-59298838 | None:intergenic | 30.0% |
!! | GTTTTCTAGAGAAGAAGAAA+GGG | - | chr1.3:59299019-59299038 | MS.gene44165:CDS | 30.0% |
!! | TGATAAAAATGGGCTAAACA+AGG | - | chr1.3:59293229-59293248 | MS.gene44165:CDS | 30.0% |
!!! | ACCCATTTTTTAGGGTAAAA+AGG | + | chr1.3:59298167-59298186 | None:intergenic | 30.0% |
!!! | CATTTTTTTGTCTGGGTTTT+GGG | - | chr1.3:59294943-59294962 | MS.gene44165:intron | 30.0% |
!!! | CGTATTTTTGGAGTTCTATT+GGG | - | chr1.3:59296307-59296326 | MS.gene44165:intron | 30.0% |
!!! | CTTGAAATGACCCATTTTTT+AGG | + | chr1.3:59298176-59298195 | None:intergenic | 30.0% |
AAAGTGGAAATCACACCTTA+AGG | + | chr1.3:59295113-59295132 | None:intergenic | 35.0% | |
AACACCATAGTTACCATGAA+AGG | - | chr1.3:59298634-59298653 | MS.gene44165:intron | 35.0% | |
AATGTGACCATCTTTACAGT+TGG | - | chr1.3:59294452-59294471 | MS.gene44165:intron | 35.0% | |
ACAGAGAACTGTGCAAAAAA+AGG | - | chr1.3:59299250-59299269 | MS.gene44165:intron | 35.0% | |
ACATAAAATAAGGTCCAGTC+TGG | + | chr1.3:59294000-59294019 | None:intergenic | 35.0% | |
ACTAATAAATTCATGCTGGC+AGG | - | chr1.3:59296381-59296400 | MS.gene44165:intron | 35.0% | |
AGATTGTTTGAGAGAGCTTA+TGG | + | chr1.3:59293757-59293776 | None:intergenic | 35.0% | |
AGCCTTCACGTGATAAAAAT+GGG | - | chr1.3:59293219-59293238 | MS.gene44165:CDS | 35.0% | |
AGTTAATCGAAATTCCAGAC+TGG | - | chr1.3:59293983-59294002 | MS.gene44165:intron | 35.0% | |
AGTTCTTCAGTGTATGTTGA+GGG | - | chr1.3:59294680-59294699 | MS.gene44165:intron | 35.0% | |
ATCAACGTTGAGTGATGTTA+CGG | + | chr1.3:59297643-59297662 | None:intergenic | 35.0% | |
ATGACCTTTCATGGTAACTA+TGG | + | chr1.3:59298641-59298660 | None:intergenic | 35.0% | |
ATGTATGACCAGAGAATTGT+AGG | - | chr1.3:59294485-59294504 | MS.gene44165:intron | 35.0% | |
ATTTCATTACAGCCAAATGG+AGG | - | chr1.3:59299049-59299068 | MS.gene44165:CDS | 35.0% | |
CAACAGAGCTTAATGTTTGT+TGG | + | chr1.3:59294843-59294862 | None:intergenic | 35.0% | |
CACACGACAAAATGTCTTTA+AGG | + | chr1.3:59297869-59297888 | None:intergenic | 35.0% | |
CACGACAAAATGTCTTTAAG+GGG | + | chr1.3:59297867-59297886 | None:intergenic | 35.0% | |
CACTTGAGAATAAAAAGTCG+AGG | + | chr1.3:59297303-59297322 | None:intergenic | 35.0% | |
CATGTATTCTTTGCACAGAA+AGG | - | chr1.3:59295923-59295942 | MS.gene44165:intron | 35.0% | |
CCAAAACCCAGACAAAAAAA+TGG | + | chr1.3:59294945-59294964 | None:intergenic | 35.0% | |
CCTTCATATGTCTCCAAAAA+AGG | + | chr1.3:59295513-59295532 | None:intergenic | 35.0% | |
CTAAGTAAACCATCCATATG+CGG | + | chr1.3:59295558-59295577 | None:intergenic | 35.0% | |
CTCCTGTACAGAAGATATTA+AGG | - | chr1.3:59294420-59294439 | MS.gene44165:intron | 35.0% | |
CTGTGCAAAGAATACATGTT+TGG | + | chr1.3:59295921-59295940 | None:intergenic | 35.0% | |
CTTAGTTCCATAAACTCTCT+AGG | + | chr1.3:59293699-59293718 | None:intergenic | 35.0% | |
GAAGAAATCTGCCCATTTAA+TGG | - | chr1.3:59296419-59296438 | MS.gene44165:intron | 35.0% | |
GATCATAATTTATGTCCTGC+AGG | + | chr1.3:59295609-59295628 | None:intergenic | 35.0% | |
GATTGGGAAACTTATCAAAC+TGG | - | chr1.3:59295430-59295449 | MS.gene44165:intron | 35.0% | |
GTAGAATCAATTCTGGACTA+TGG | - | chr1.3:59294190-59294209 | MS.gene44165:intron | 35.0% | |
GTCATTCTATTTAAGTGAGG+AGG | - | chr1.3:59297363-59297382 | MS.gene44165:intron | 35.0% | |
GTGCAAAAAAAGGATTCTCA+TGG | - | chr1.3:59299260-59299279 | MS.gene44165:intron | 35.0% | |
TAGCAATGTCTTTGTCTACA+TGG | + | chr1.3:59298729-59298748 | None:intergenic | 35.0% | |
TAGGATTCCATCCAAATTAG+TGG | - | chr1.3:59299149-59299168 | MS.gene44165:intron | 35.0% | |
TATGAACCAAAACCAGTTGT+AGG | - | chr1.3:59298901-59298920 | MS.gene44165:intron | 35.0% | |
TGAAAATCCTTGGTATGTCT+AGG | + | chr1.3:59297801-59297820 | None:intergenic | 35.0% | |
TGGGTCATTCTATTTAAGTG+AGG | - | chr1.3:59297360-59297379 | MS.gene44165:intron | 35.0% | |
TGTCTGCTATCATTGTATAG+TGG | - | chr1.3:59294066-59294085 | MS.gene44165:intron | 35.0% | |
TTCCAACTTACTGAACAAGT+GGG | + | chr1.3:59298468-59298487 | None:intergenic | 35.0% | |
TTCTCCATGTTATCTCTTCA+GGG | - | chr1.3:59296145-59296164 | MS.gene44165:intron | 35.0% | |
TTTCATTACAGCCAAATGGA+GGG | - | chr1.3:59299050-59299069 | MS.gene44165:CDS | 35.0% | |
! | ACATGGTAGTGATTCAAAAC+AGG | - | chr1.3:59294370-59294389 | MS.gene44165:intron | 35.0% |
! | ACATTGTAGTGGAGAAACAT+AGG | - | chr1.3:59294975-59294994 | MS.gene44165:intron | 35.0% |
! | ACGACAAAATGTCTTTAAGG+GGG | + | chr1.3:59297866-59297885 | None:intergenic | 35.0% |
! | ATTAAAAGTGTGAACCGAAC+TGG | - | chr1.3:59295378-59295397 | MS.gene44165:intron | 35.0% |
! | ATTGTTGTTCCCATGTTAAG+GGG | + | chr1.3:59297766-59297785 | None:intergenic | 35.0% |
! | ATTTTCATTGTGTTGTCACC+AGG | - | chr1.3:59299085-59299104 | MS.gene44165:CDS | 35.0% |
! | CACTTAACTTGACCATGATT+TGG | - | chr1.3:59295315-59295334 | MS.gene44165:intron | 35.0% |
! | CATTGTAGTGGAGAAACATA+GGG | - | chr1.3:59294976-59294995 | MS.gene44165:intron | 35.0% |
! | CATTGTTGTTCCCATGTTAA+GGG | + | chr1.3:59297767-59297786 | None:intergenic | 35.0% |
! | CGCCTTTTTACCCTAAAAAA+TGG | - | chr1.3:59298162-59298181 | MS.gene44165:intron | 35.0% |
! | CTAGAAGACACCTTTTATGA+AGG | + | chr1.3:59295223-59295242 | None:intergenic | 35.0% |
! | CTGATTTTATCTTGGTGAAG+AGG | - | chr1.3:59295946-59295965 | MS.gene44165:intron | 35.0% |
! | GACATGAGTTTTCATCTTTC+TGG | - | chr1.3:59297572-59297591 | MS.gene44165:intron | 35.0% |
! | GATGAGTTTGATGATTTCCT+TGG | - | chr1.3:59293263-59293282 | MS.gene44165:CDS | 35.0% |
! | TCATTGTTGTTCCCATGTTA+AGG | + | chr1.3:59297768-59297787 | None:intergenic | 35.0% |
! | TCTTTTACTTGAACAAGCAC+TGG | - | chr1.3:59298939-59298958 | MS.gene44165:CDS | 35.0% |
!! | CAGAAAGGCTGATTTTATCT+TGG | - | chr1.3:59295938-59295957 | MS.gene44165:intron | 35.0% |
!! | GGTTTTCTAGAGAAGAAGAA+AGG | - | chr1.3:59299018-59299037 | MS.gene44165:CDS | 35.0% |
!! | GTTTTGAATCACTACCATGT+TGG | + | chr1.3:59294370-59294389 | None:intergenic | 35.0% |
!!! | CCATTTTTTTGTCTGGGTTT+TGG | - | chr1.3:59294942-59294961 | MS.gene44165:intron | 35.0% |
!!! | CCGTATTTTTGGAGTTCTAT+TGG | - | chr1.3:59296306-59296325 | MS.gene44165:intron | 35.0% |
!!! | CCTTTTTTGGAGACATATGA+AGG | - | chr1.3:59295510-59295529 | MS.gene44165:intron | 35.0% |
!!! | CTTTTGGAGTGAGAAGTTAT+GGG | - | chr1.3:59297701-59297720 | MS.gene44165:CDS | 35.0% |
AACTCAGTATGATCCCAACA+TGG | + | chr1.3:59296121-59296140 | None:intergenic | 40.0% | |
AATGACCCATCTTAAGTGAC+AGG | + | chr1.3:59297349-59297368 | None:intergenic | 40.0% | |
AATTTCAACCTGGGTCTGTT+TGG | + | chr1.3:59293821-59293840 | None:intergenic | 40.0% | |
ACCATCTTTACAGTTGGAAC+GGG | - | chr1.3:59294458-59294477 | MS.gene44165:intron | 40.0% | |
ACTCAGTATGATCCCAACAT+GGG | + | chr1.3:59296120-59296139 | None:intergenic | 40.0% | |
AGCGGGAAGAATAAGAATTG+AGG | - | chr1.3:59296757-59296776 | MS.gene44165:intron | 40.0% | |
AGTAGAAATCAGCAACGATG+GGG | - | chr1.3:59295408-59295427 | MS.gene44165:intron | 40.0% | |
AGTTGAGGATTAATGTGCCA+AGG | - | chr1.3:59298665-59298684 | MS.gene44165:intron | 40.0% | |
ATAAGTGCTCATCATGTACG+TGG | - | chr1.3:59293589-59293608 | MS.gene44165:intron | 40.0% | |
ATAGTAACTGCTACCTCGTA+CGG | - | chr1.3:59298545-59298564 | MS.gene44165:intron | 40.0% | |
ATATCTTCTGTACAGGAGCT+TGG | + | chr1.3:59294418-59294437 | None:intergenic | 40.0% | |
ATTGCTACTGACAGTGATGA+GGG | - | chr1.3:59298742-59298761 | MS.gene44165:intron | 40.0% | |
CAAATGGAGGGCAAGTAAAA+AGG | - | chr1.3:59299062-59299081 | MS.gene44165:CDS | 40.0% | |
CAACTTTGGATGACCTTTCA+TGG | + | chr1.3:59298650-59298669 | None:intergenic | 40.0% | |
CAGCCTTCACGTGATAAAAA+TGG | - | chr1.3:59293218-59293237 | MS.gene44165:CDS | 40.0% | |
CAGTTCTTCAGTGTATGTTG+AGG | - | chr1.3:59294679-59294698 | MS.gene44165:intron | 40.0% | |
CCAGAGAATTGTAGGATCAA+AGG | - | chr1.3:59294493-59294512 | MS.gene44165:intron | 40.0% | |
CCTTTGATCCTACAATTCTC+TGG | + | chr1.3:59294496-59294515 | None:intergenic | 40.0% | |
CGAATGACCACTAATTTGGA+TGG | + | chr1.3:59299159-59299178 | None:intergenic | 40.0% | |
CTGTGGCATTTGTATTGCAA+TGG | - | chr1.3:59295877-59295896 | MS.gene44165:intron | 40.0% | |
CTTCAACTTGCATCGTGAAA+AGG | + | chr1.3:59298391-59298410 | None:intergenic | 40.0% | |
CTTCCAACTTACTGAACAAG+TGG | + | chr1.3:59298469-59298488 | None:intergenic | 40.0% | |
GAAATCACACCTTAAGGTGT+GGG | + | chr1.3:59295107-59295126 | None:intergenic | 40.0% | |
GACCATCTTTACAGTTGGAA+CGG | - | chr1.3:59294457-59294476 | MS.gene44165:intron | 40.0% | |
GAGTAGAAATCAGCAACGAT+GGG | - | chr1.3:59295407-59295426 | MS.gene44165:intron | 40.0% | |
GATTAATGTGCCAAGGTTAC+CGG | - | chr1.3:59298672-59298691 | MS.gene44165:intron | 40.0% | |
GGCACATTAATCCTCAACTT+TGG | + | chr1.3:59298664-59298683 | None:intergenic | 40.0% | |
GTGTAATGTATGATTGGCAG+CGG | - | chr1.3:59296739-59296758 | MS.gene44165:intron | 40.0% | |
GTTCTCCATGTTATCTCTTC+AGG | - | chr1.3:59296144-59296163 | MS.gene44165:intron | 40.0% | |
GTTTCCCTGAAGAGATAACA+TGG | + | chr1.3:59296152-59296171 | None:intergenic | 40.0% | |
GTTTGGAAAAGTTAGGAGGA+AGG | - | chr1.3:59299107-59299126 | MS.gene44165:intron | 40.0% | |
TCACCAGGTTTGGAAAAGTT+AGG | - | chr1.3:59299100-59299119 | MS.gene44165:intron | 40.0% | |
TCCAACTTACTGAACAAGTG+GGG | + | chr1.3:59298467-59298486 | None:intergenic | 40.0% | |
TGAAAGGTCATCCAAAGTTG+AGG | - | chr1.3:59298650-59298669 | MS.gene44165:intron | 40.0% | |
TGAGATAATGCACCTACAAC+TGG | + | chr1.3:59298916-59298935 | None:intergenic | 40.0% | |
TGAGTAGAAATCAGCAACGA+TGG | - | chr1.3:59295406-59295425 | MS.gene44165:intron | 40.0% | |
TGTAATGTATGATTGGCAGC+GGG | - | chr1.3:59296740-59296759 | MS.gene44165:intron | 40.0% | |
TTCTACTCAAACTGCCAGTT+CGG | + | chr1.3:59295395-59295414 | None:intergenic | 40.0% | |
TTGCTAAAAGACGCCTTCAT+GGG | + | chr1.3:59295084-59295103 | None:intergenic | 40.0% | |
! | AATTTTATGCTGTAGCCTGC+AGG | - | chr1.3:59295591-59295610 | MS.gene44165:intron | 40.0% |
! | AGGTACTGTGTGTTGTTGAT+TGG | - | chr1.3:59293354-59293373 | MS.gene44165:CDS | 40.0% |
! | CGGTGCATAATGAAGTACTA+GGG | - | chr1.3:59294549-59294568 | MS.gene44165:intron | 40.0% |
! | CTTTTTACTTGCCCTCCATT+TGG | + | chr1.3:59299064-59299083 | None:intergenic | 40.0% |
! | GAGTTTGATGATTTCCTTGG+TGG | - | chr1.3:59293266-59293285 | MS.gene44165:CDS | 40.0% |
! | GGGAAAGTTGATCCAAATCA+TGG | + | chr1.3:59295330-59295349 | None:intergenic | 40.0% |
! | GGTGCATAATGAAGTACTAG+GGG | - | chr1.3:59294550-59294569 | MS.gene44165:intron | 40.0% |
! | GGTGTACAGGAACACATTTT+TGG | - | chr1.3:59296555-59296574 | MS.gene44165:intron | 40.0% |
! | GTGAGTTGTGACCGTATTTT+TGG | - | chr1.3:59296295-59296314 | MS.gene44165:intron | 40.0% |
! | TCCATCCTGTCACTTAAGAT+GGG | - | chr1.3:59297341-59297360 | MS.gene44165:intron | 40.0% |
! | TGAAGGAAAGCATAGCAGAA+TGG | - | chr1.3:59298969-59298988 | MS.gene44165:CDS | 40.0% |
! | TTGATGATTTCCTTGGTGGA+AGG | - | chr1.3:59293270-59293289 | MS.gene44165:CDS | 40.0% |
! | TTTACGTCTGAAACTGATGC+TGG | - | chr1.3:59293194-59293213 | MS.gene44165:CDS | 40.0% |
! | TTTTAGCAACCCACACCTTA+AGG | - | chr1.3:59295095-59295114 | MS.gene44165:intron | 40.0% |
! | TTTTGTTGGCATCTCTAGCA+TGG | - | chr1.3:59293391-59293410 | MS.gene44165:CDS | 40.0% |
!! | AATGCACCTACAACTGGTTT+TGG | + | chr1.3:59298910-59298929 | None:intergenic | 40.0% |
!! | ACTCGTAAAAGTACTGGTTC+TGG | + | chr1.3:59294162-59294181 | None:intergenic | 40.0% |
!! | AGCCCATTTTTATCACGTGA+AGG | + | chr1.3:59293224-59293243 | None:intergenic | 40.0% |
!! | AGCTTGTTTCTGCATTCAGA+GGG | - | chr1.3:59295005-59295024 | MS.gene44165:intron | 40.0% |
!! | AGTTTGTTGTTGCCCATGTT+GGG | - | chr1.3:59296105-59296124 | MS.gene44165:intron | 40.0% |
!! | GAGCGTTGATAAAACTTCCT+TGG | - | chr1.3:59296194-59296213 | MS.gene44165:intron | 40.0% |
!! | GAGTTTTCATCTTTCTGGGA+CGG | - | chr1.3:59297577-59297596 | MS.gene44165:intron | 40.0% |
!! | GGAATAGAAGCATCTACATC+TGG | - | chr1.3:59296468-59296487 | MS.gene44165:intron | 40.0% |
!! | TAGCTTGTTTCTGCATTCAG+AGG | - | chr1.3:59295004-59295023 | MS.gene44165:intron | 40.0% |
!! | TAGTTTGTTGTTGCCCATGT+TGG | - | chr1.3:59296104-59296123 | MS.gene44165:intron | 40.0% |
!!! | AAGCTCCCCATTTTTTTGTC+TGG | - | chr1.3:59294935-59294954 | MS.gene44165:intron | 40.0% |
!!! | AGCTCCCCATTTTTTTGTCT+GGG | - | chr1.3:59294936-59294955 | MS.gene44165:intron | 40.0% |
!!! | AGTTTTCATCTTTCTGGGAC+GGG | - | chr1.3:59297578-59297597 | MS.gene44165:intron | 40.0% |
!!! | GCTTTTGGAGTGAGAAGTTA+TGG | - | chr1.3:59297700-59297719 | MS.gene44165:CDS | 40.0% |
AAATCAGCAACGATGGGGAT+TGG | - | chr1.3:59295413-59295432 | MS.gene44165:intron | 45.0% | |
AAATTCATGCTGGCAGGAGA+GGG | - | chr1.3:59296387-59296406 | MS.gene44165:intron | 45.0% | |
AATCAGCAACGATGGGGATT+GGG | - | chr1.3:59295414-59295433 | MS.gene44165:intron | 45.0% | |
ACCCATCTTAAGTGACAGGA+TGG | + | chr1.3:59297345-59297364 | None:intergenic | 45.0% | |
ACCTGGGTTATGAAACAGAC+AGG | - | chr1.3:59299322-59299341 | MS.gene44165:CDS | 45.0% | |
ATCTTTACAGTTGGAACGGG+GGG | - | chr1.3:59294461-59294480 | MS.gene44165:intron | 45.0% | |
ATGTTACGGCATGCTAATGG+AGG | + | chr1.3:59297629-59297648 | None:intergenic | 45.0% | |
ATTTGCCTAAACCTGCTCAG+TGG | - | chr1.3:59294516-59294535 | MS.gene44165:intron | 45.0% | |
CATCTTTACAGTTGGAACGG+GGG | - | chr1.3:59294460-59294479 | MS.gene44165:intron | 45.0% | |
CATTGCTACTGACAGTGATG+AGG | - | chr1.3:59298741-59298760 | MS.gene44165:intron | 45.0% | |
CATTGTGTTGTCACCAGGTT+TGG | - | chr1.3:59299090-59299109 | MS.gene44165:CDS | 45.0% | |
CCAGGTTTGGAAAAGTTAGG+AGG | - | chr1.3:59299103-59299122 | MS.gene44165:intron | 45.0% | |
CCATCTTTACAGTTGGAACG+GGG | - | chr1.3:59294459-59294478 | MS.gene44165:intron | 45.0% | |
CTTTGCATCATTGTGGCAAC+CGG | + | chr1.3:59298694-59298713 | None:intergenic | 45.0% | |
GACAGGATGGAGAAAAGTAG+CGG | + | chr1.3:59297332-59297351 | None:intergenic | 45.0% | |
GAGGCGAATGACCACTAATT+TGG | + | chr1.3:59299163-59299182 | None:intergenic | 45.0% | |
GGAAATCACACCTTAAGGTG+TGG | + | chr1.3:59295108-59295127 | None:intergenic | 45.0% | |
GGAGAGTAGGAACATTGTAG+TGG | - | chr1.3:59294964-59294983 | MS.gene44165:intron | 45.0% | |
GTGATGTTACGGCATGCTAA+TGG | + | chr1.3:59297632-59297651 | None:intergenic | 45.0% | |
GTTGCTAAAAGACGCCTTCA+TGG | + | chr1.3:59295085-59295104 | None:intergenic | 45.0% | |
GTTTCATAACCCAGGTAGTG+TGG | + | chr1.3:59299318-59299337 | None:intergenic | 45.0% | |
TAAACCATCCATATGCGGAC+AGG | + | chr1.3:59295553-59295572 | None:intergenic | 45.0% | |
TAAATTCATGCTGGCAGGAG+AGG | - | chr1.3:59296386-59296405 | MS.gene44165:intron | 45.0% | |
TCAGTCTTCTCTAGTGTCCT+AGG | - | chr1.3:59298799-59298818 | MS.gene44165:intron | 45.0% | |
TCCCCACTTGTTCAGTAAGT+TGG | - | chr1.3:59298463-59298482 | MS.gene44165:intron | 45.0% | |
TGATCGAGTGGAGAAGAGTA+TGG | + | chr1.3:59298516-59298535 | None:intergenic | 45.0% | |
TGTGGACTTGGAGAACACAA+GGG | + | chr1.3:59299300-59299319 | None:intergenic | 45.0% | |
TGTTACGGCATGCTAATGGA+GGG | + | chr1.3:59297628-59297647 | None:intergenic | 45.0% | |
TGTTGATCCCAGTAGAGGTT+GGG | - | chr1.3:59293313-59293332 | MS.gene44165:CDS | 45.0% | |
TTGGAGTGAGAAGTTATGGG+TGG | - | chr1.3:59297704-59297723 | MS.gene44165:CDS | 45.0% | |
TTGGCATCTCTAGCATGGAA+TGG | - | chr1.3:59293396-59293415 | MS.gene44165:CDS | 45.0% | |
! | AAGTTGATCCAAACAGACCC+AGG | - | chr1.3:59293810-59293829 | MS.gene44165:intron | 45.0% |
! | ACAGACGGTGTGCTTTTACA+CGG | - | chr1.3:59295273-59295292 | MS.gene44165:intron | 45.0% |
! | ACAGTGATGAGGGAAGCATA+AGG | - | chr1.3:59298752-59298771 | MS.gene44165:intron | 45.0% |
! | AGAAGAGTATGGGGGTAAGT+GGG | + | chr1.3:59298505-59298524 | None:intergenic | 45.0% |
! | ATCGAGTGGAGAAGAGTATG+GGG | + | chr1.3:59298514-59298533 | None:intergenic | 45.0% |
! | CAGTGATGAGGGAAGCATAA+GGG | - | chr1.3:59298753-59298772 | MS.gene44165:intron | 45.0% |
! | CCTCCTAACTTTTCCAAACC+TGG | + | chr1.3:59299106-59299125 | None:intergenic | 45.0% |
! | CTCCATCCTGTCACTTAAGA+TGG | - | chr1.3:59297340-59297359 | MS.gene44165:intron | 45.0% |
! | CTTTAAGGGGGTGTGTTTCA+TGG | + | chr1.3:59297854-59297873 | None:intergenic | 45.0% |
! | GATCGAGTGGAGAAGAGTAT+GGG | + | chr1.3:59298515-59298534 | None:intergenic | 45.0% |
! | GCGGTGCATAATGAAGTACT+AGG | - | chr1.3:59294548-59294567 | MS.gene44165:intron | 45.0% |
! | GTAGCGGAAAACATAGGTGT+TGG | + | chr1.3:59298434-59298453 | None:intergenic | 45.0% |
! | TTAGGAGGAAGGTTAGTTCG+TGG | - | chr1.3:59299118-59299137 | MS.gene44165:intron | 45.0% |
! | TTAGTTCGTGGCGATTGGTT+AGG | - | chr1.3:59299130-59299149 | MS.gene44165:intron | 45.0% |
!! | TGGGTTTGTTGTGCTGTATG+AGG | - | chr1.3:59295807-59295826 | MS.gene44165:intron | 45.0% |
!! | CTTTATATATATATATAAAA+GGG | + | chr1.3:59295251-59295270 | None:intergenic | 5.0% |
AAACTTCGCCTCATCAGGAG+TGG | - | chr1.3:59296168-59296187 | MS.gene44165:intron | 50.0% | |
AACACCCTGCAGCTGTAACT+CGG | + | chr1.3:59293297-59293316 | None:intergenic | 50.0% | |
AAGGTTCACCTGTCCGCATA+TGG | - | chr1.3:59295542-59295561 | MS.gene44165:intron | 50.0% | |
ACGAAATCCCCAACCTCTAC+TGG | + | chr1.3:59293324-59293343 | None:intergenic | 50.0% | |
AGCTTCTGTTCCAAGAAGCG+CGG | - | chr1.3:59293154-59293173 | MS.gene44165:CDS | 50.0% | |
AGTAGAGGTTGGGGATTTCG+TGG | - | chr1.3:59293323-59293342 | MS.gene44165:CDS | 50.0% | |
ATGCGTTCGTCGTGATGGTA+CGG | - | chr1.3:59294766-59294785 | MS.gene44165:intron | 50.0% | |
ATTGTGGCAACCGGTAACCT+TGG | + | chr1.3:59298685-59298704 | None:intergenic | 50.0% | |
ATTTGGGGACAAATGCGCTG+TGG | - | chr1.3:59295860-59295879 | MS.gene44165:intron | 50.0% | |
CATAGAAGAGAAGCCGTACG+AGG | + | chr1.3:59298561-59298580 | None:intergenic | 50.0% | |
CATCTTCGACGCTCTTCTCA+CGG | - | chr1.3:59292927-59292946 | MS.gene44165:CDS | 50.0% | |
CCCCGTTCCAACTGTAAAGA+TGG | + | chr1.3:59294462-59294481 | None:intergenic | 50.0% | |
CGAAATCCCCAACCTCTACT+GGG | + | chr1.3:59293323-59293342 | None:intergenic | 50.0% | |
CTAAAAGACGCCTTCATGGG+TGG | + | chr1.3:59295081-59295100 | None:intergenic | 50.0% | |
CTCGTACGGCTTCTCTTCTA+TGG | - | chr1.3:59298559-59298578 | MS.gene44165:intron | 50.0% | |
GAGATATGCGTTCGTCGTGA+TGG | - | chr1.3:59294761-59294780 | MS.gene44165:intron | 50.0% | |
GCCTGTCTGTTTCATAACCC+AGG | + | chr1.3:59299326-59299345 | None:intergenic | 50.0% | |
GCTAAGCCAAAGCCATCACT+CGG | - | chr1.3:59298775-59298794 | MS.gene44165:intron | 50.0% | |
GTGTGGACTTGGAGAACACA+AGG | + | chr1.3:59299301-59299320 | None:intergenic | 50.0% | |
GTTGATCCCAGTAGAGGTTG+GGG | - | chr1.3:59293314-59293333 | MS.gene44165:CDS | 50.0% | |
GTTGTTCCCATGTTAAGGGG+CGG | + | chr1.3:59297763-59297782 | None:intergenic | 50.0% | |
TAACCCAGGTAGTGTGGACT+TGG | + | chr1.3:59299312-59299331 | None:intergenic | 50.0% | |
TAGCATAACACCGCGCTTCT+TGG | + | chr1.3:59293167-59293186 | None:intergenic | 50.0% | |
TCACGACGAACGCATATCTC+TGG | + | chr1.3:59294761-59294780 | None:intergenic | 50.0% | |
TCTCCAAGTCCACACTACCT+GGG | - | chr1.3:59299306-59299325 | MS.gene44165:intron | 50.0% | |
TCTTTACAGTTGGAACGGGG+GGG | - | chr1.3:59294462-59294481 | MS.gene44165:intron | 50.0% | |
TTACTGAACAAGTGGGGACG+TGG | + | chr1.3:59298461-59298480 | None:intergenic | 50.0% | |
TTCACCTGTCCGCATATGGA+TGG | - | chr1.3:59295546-59295565 | MS.gene44165:intron | 50.0% | |
TTCTCCAAGTCCACACTACC+TGG | - | chr1.3:59299305-59299324 | MS.gene44165:intron | 50.0% | |
TTGCTAGAAGCCACCCATGA+AGG | - | chr1.3:59295068-59295087 | MS.gene44165:intron | 50.0% | |
TTGTTCCCATGTTAAGGGGC+GGG | + | chr1.3:59297762-59297781 | None:intergenic | 50.0% | |
! | CTTGTATGGGAGAGGTGTAC+AGG | - | chr1.3:59296542-59296561 | MS.gene44165:intron | 50.0% |
! | GAAGAGTATGGGGGTAAGTG+GGG | + | chr1.3:59298504-59298523 | None:intergenic | 50.0% |
! | GAAGGTTAGTTCGTGGCGAT+TGG | - | chr1.3:59299125-59299144 | MS.gene44165:intron | 50.0% |
! | GAGAAGAGTATGGGGGTAAG+TGG | + | chr1.3:59298506-59298525 | None:intergenic | 50.0% |
! | GGACGTGTAGCGGAAAACAT+AGG | + | chr1.3:59298440-59298459 | None:intergenic | 50.0% |
! | GTGTTGATCCCAGTAGAGGT+TGG | - | chr1.3:59293312-59293331 | MS.gene44165:CDS | 50.0% |
! | TCGAGTGGAGAAGAGTATGG+GGG | + | chr1.3:59298513-59298532 | None:intergenic | 50.0% |
!! | AGAAGAGCGTCGAAGATGCT+TGG | + | chr1.3:59292925-59292944 | None:intergenic | 50.0% |
!! | CAAGCACTGGAGCAAGATGA+AGG | - | chr1.3:59298952-59298971 | MS.gene44165:CDS | 50.0% |
!!! | TGTCTGGGTTTTGGGAGAGT+AGG | - | chr1.3:59294951-59294970 | MS.gene44165:intron | 50.0% |
ACACCCTGCAGCTGTAACTC+GGG | + | chr1.3:59293296-59293315 | None:intergenic | 55.0% | |
ACTGAGCCGAGTGATGGCTT+TGG | + | chr1.3:59298784-59298803 | None:intergenic | 55.0% | |
CAGGGAAACTTCGCCTCATC+AGG | - | chr1.3:59296163-59296182 | MS.gene44165:intron | 55.0% | |
CGATGCCACTGAGCAGGTTT+AGG | + | chr1.3:59294524-59294543 | None:intergenic | 55.0% | |
GAGAAGACTGAGCCGAGTGA+TGG | + | chr1.3:59298790-59298809 | None:intergenic | 55.0% | |
GGGATTTCGTGGTGTGCACA+AGG | - | chr1.3:59293334-59293353 | MS.gene44165:CDS | 55.0% | |
TGCTCAGTGGCATCGCATTG+CGG | - | chr1.3:59294529-59294548 | MS.gene44165:intron | 55.0% | |
!! | CAGGGTGTTGATCCCAGTAG+AGG | - | chr1.3:59293308-59293327 | MS.gene44165:CDS | 55.0% |
AAGGCCCGAGTTACAGCTGC+AGG | - | chr1.3:59293289-59293308 | MS.gene44165:CDS | 60.0% | |
AGGAGTCCCGCCCCTTAACA+TGG | - | chr1.3:59297753-59297772 | MS.gene44165:CDS | 60.0% | |
AGGCCCGAGTTACAGCTGCA+GGG | - | chr1.3:59293290-59293309 | MS.gene44165:CDS | 60.0% | |
CGCTCTCTCCACTCCTGATG+AGG | + | chr1.3:59296179-59296198 | None:intergenic | 60.0% | |
CGTTCGTCGTGATGGTACGG+TGG | - | chr1.3:59294769-59294788 | MS.gene44165:intron | 60.0% | |
GCAATGCGATGCCACTGAGC+AGG | + | chr1.3:59294530-59294549 | None:intergenic | 60.0% | |
GGAGTCCCGCCCCTTAACAT+GGG | - | chr1.3:59297754-59297773 | MS.gene44165:CDS | 60.0% | |
GTAACTCGGGCCTTCCACCA+AGG | + | chr1.3:59293283-59293302 | None:intergenic | 60.0% | |
GTGGGGACGTGGACGTGTAG+CGG | + | chr1.3:59298450-59298469 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 59292897 | 59299371 | 59292897 | ID=MS.gene44165 |
chr1.3 | mRNA | 59292897 | 59299371 | 59292897 | ID=MS.gene44165.t1;Parent=MS.gene44165 |
chr1.3 | exon | 59299320 | 59299371 | 59299320 | ID=MS.gene44165.t1.exon1;Parent=MS.gene44165.t1 |
chr1.3 | CDS | 59299320 | 59299371 | 59299320 | ID=cds.MS.gene44165.t1;Parent=MS.gene44165.t1 |
chr1.3 | exon | 59298913 | 59299112 | 59298913 | ID=MS.gene44165.t1.exon2;Parent=MS.gene44165.t1 |
chr1.3 | CDS | 59298913 | 59299112 | 59298913 | ID=cds.MS.gene44165.t1;Parent=MS.gene44165.t1 |
chr1.3 | exon | 59297668 | 59297876 | 59297668 | ID=MS.gene44165.t1.exon3;Parent=MS.gene44165.t1 |
chr1.3 | CDS | 59297668 | 59297876 | 59297668 | ID=cds.MS.gene44165.t1;Parent=MS.gene44165.t1 |
chr1.3 | exon | 59297486 | 59297586 | 59297486 | ID=MS.gene44165.t1.exon4;Parent=MS.gene44165.t1 |
chr1.3 | CDS | 59297486 | 59297586 | 59297486 | ID=cds.MS.gene44165.t1;Parent=MS.gene44165.t1 |
chr1.3 | exon | 59296043 | 59296102 | 59296043 | ID=MS.gene44165.t1.exon5;Parent=MS.gene44165.t1 |
chr1.3 | CDS | 59296043 | 59296102 | 59296043 | ID=cds.MS.gene44165.t1;Parent=MS.gene44165.t1 |
chr1.3 | exon | 59292897 | 59293534 | 59292897 | ID=MS.gene44165.t1.exon6;Parent=MS.gene44165.t1 |
chr1.3 | CDS | 59292897 | 59293534 | 59292897 | ID=cds.MS.gene44165.t1;Parent=MS.gene44165.t1 |
Gene Sequence |
Protein sequence |