Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44213.t1 | XP_003629259.1 | 88.6 | 403 | 42 | 2 | 1 | 400 | 1 | 402 | 6.70E-161 | 577 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44213.t1 | Q94K80 | 32.7 | 367 | 204 | 12 | 46 | 400 | 101 | 436 | 1.6e-17 | 92.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44213.t1 | G7LB62 | 88.6 | 403 | 42 | 2 | 1 | 400 | 1 | 402 | 4.8e-161 | 577.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049873 | MS.gene44213 | -0.800571 | 1.35E-48 | -1.69E-46 |
| MS.gene04995 | MS.gene44213 | 0.809337 | 1.99E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene44213 | -0.827294 | 1.69E-54 | -1.69E-46 |
| MS.gene050953 | MS.gene44213 | -0.82292 | 1.83E-53 | -1.69E-46 |
| MS.gene052176 | MS.gene44213 | -0.826136 | 3.20E-54 | -1.69E-46 |
| MS.gene052309 | MS.gene44213 | 0.853442 | 2.38E-61 | -1.69E-46 |
| MS.gene052358 | MS.gene44213 | 0.900179 | 9.49E-78 | -1.69E-46 |
| MS.gene052361 | MS.gene44213 | 0.824527 | 7.69E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene44213 | -0.807581 | 4.71E-50 | -1.69E-46 |
| MS.gene052965 | MS.gene44213 | 0.845209 | 4.68E-59 | -1.69E-46 |
| MS.gene053006 | MS.gene44213 | -0.811403 | 7.13E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene44213 | -0.80241 | 5.69E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene44213 | 0.807785 | 4.26E-50 | -1.69E-46 |
| MS.gene054405 | MS.gene44213 | -0.82249 | 2.30E-53 | -1.69E-46 |
| MS.gene055784 | MS.gene44213 | 0.825725 | 4.01E-54 | -1.69E-46 |
| MS.gene056091 | MS.gene44213 | -0.80755 | 4.78E-50 | -1.69E-46 |
| MS.gene056969 | MS.gene44213 | 0.802991 | 4.31E-49 | -1.69E-46 |
| MS.gene057079 | MS.gene44213 | -0.823608 | 1.26E-53 | -1.69E-46 |
| MS.gene05954 | MS.gene44213 | -0.843935 | 1.03E-58 | -1.69E-46 |
| MS.gene060521 | MS.gene44213 | -0.803277 | 3.76E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene44213 | -0.835535 | 1.59E-56 | -1.69E-46 |
| MS.gene060634 | MS.gene44213 | 0.826908 | 2.10E-54 | -1.69E-46 |
| MS.gene060879 | MS.gene44213 | -0.806814 | 6.85E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene44213 | 0.888156 | 7.58E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44213.t1 | MTR_8g075120 | 93.548 | 403 | 22 | 2 | 1 | 400 | 1 | 402 | 0.0 | 677 |
| MS.gene44213.t1 | MTR_5g022790 | 44.470 | 434 | 179 | 17 | 4 | 400 | 15 | 423 | 5.09e-88 | 280 |
| MS.gene44213.t1 | MTR_5g022790 | 48.822 | 297 | 114 | 11 | 126 | 400 | 8 | 288 | 2.41e-75 | 239 |
| MS.gene44213.t1 | MTR_5g022790 | 48.822 | 297 | 114 | 11 | 126 | 400 | 8 | 288 | 4.98e-74 | 240 |
| MS.gene44213.t1 | MTR_1g025920 | 38.702 | 416 | 192 | 18 | 17 | 400 | 91 | 475 | 1.14e-48 | 172 |
| MS.gene44213.t1 | MTR_1g025920 | 38.702 | 416 | 192 | 18 | 17 | 400 | 91 | 475 | 2.37e-48 | 172 |
| MS.gene44213.t1 | MTR_3g114450 | 33.596 | 381 | 177 | 17 | 59 | 399 | 88 | 432 | 8.74e-34 | 131 |
| MS.gene44213.t1 | MTR_3g114340 | 34.324 | 370 | 164 | 19 | 69 | 399 | 33 | 362 | 3.59e-30 | 120 |
| MS.gene44213.t1 | MTR_3g114450 | 31.755 | 359 | 169 | 17 | 59 | 377 | 88 | 410 | 2.04e-23 | 101 |
| MS.gene44213.t1 | MTR_5g088200 | 45.652 | 92 | 49 | 1 | 310 | 400 | 290 | 381 | 9.76e-17 | 82.8 |
| MS.gene44213.t1 | MTR_7g117595 | 35.922 | 103 | 64 | 1 | 299 | 399 | 80 | 182 | 1.71e-11 | 65.9 |
| MS.gene44213.t1 | MTR_7g117595 | 35.922 | 103 | 64 | 1 | 299 | 399 | 80 | 182 | 1.92e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44213.t1 | AT4G35890 | 35.052 | 388 | 191 | 16 | 37 | 400 | 86 | 436 | 5.29e-44 | 160 |
| MS.gene44213.t1 | AT4G35890 | 33.973 | 365 | 180 | 16 | 37 | 377 | 86 | 413 | 2.21e-36 | 137 |
| MS.gene44213.t1 | AT5G66100 | 32.918 | 401 | 193 | 18 | 26 | 400 | 52 | 402 | 6.98e-33 | 129 |
| MS.gene44213.t1 | AT5G66100 | 30.341 | 323 | 158 | 17 | 49 | 345 | 66 | 347 | 4.43e-11 | 64.3 |
Find 146 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCACCAATCCCACCTTATA+TGG | 0.156299 | 8.1:-31926031 | MS.gene44213:CDS |
| AATCCTGCTATTAAATTTAG+AGG | 0.222995 | 8.1:+31925596 | None:intergenic |
| ACCAGATTGACTACTATTTC+AGG | 0.266021 | 8.1:-31925784 | MS.gene44213:intron |
| TGGCGGCTGGCGGCCTCCAT+TGG | 0.323639 | 8.1:+31926398 | None:intergenic |
| CTCCAATGCTGCTGCTTCTT+CGG | 0.327782 | 8.1:-31926955 | MS.gene44213:CDS |
| GTCTGCTTCCAGAGTTAAAA+TGG | 0.329463 | 8.1:+31926199 | None:intergenic |
| TCCGGTTCCTGGATGAATTT+CGG | 0.329667 | 8.1:+31926259 | None:intergenic |
| GTGGGATTGGTGGCAGTGGC+GGG | 0.338899 | 8.1:+31926040 | None:intergenic |
| CCACCTTATATGGGCTCATA+TGG | 0.349352 | 8.1:-31926021 | MS.gene44213:CDS |
| CAATCATAACTCTGCTCAAA+TGG | 0.349628 | 8.1:-31926328 | MS.gene44213:CDS |
| TGGCGATTTCGCCGGAGCTT+TGG | 0.359704 | 8.1:+31926893 | None:intergenic |
| CTGGCTCCAAGGTGCGGCGG+CGG | 0.361110 | 8.1:+31927130 | None:intergenic |
| GGGATTGGTGGCAGTGGCGG+GGG | 0.362219 | 8.1:+31926042 | None:intergenic |
| TTAACGGTAGAGACAATTAT+AGG | 0.363096 | 8.1:-31926128 | MS.gene44213:CDS |
| GAAGAGGAACATGGATGATC+AGG | 0.368604 | 8.1:-31925627 | MS.gene44213:CDS |
| GGTGGGATTGGTGGCAGTGG+CGG | 0.370947 | 8.1:+31926039 | None:intergenic |
| CCAAGGTGCGGCGGCGGGAG+AGG | 0.373375 | 8.1:+31927136 | None:intergenic |
| GTTGTAGACCACCGCCATTC+CGG | 0.378736 | 8.1:+31926241 | None:intergenic |
| CGGCGCTGAGGCTGATCATT+GGG | 0.381172 | 8.1:+31926279 | None:intergenic |
| GATTTGTTCCACAGTTTGTA+AGG | 0.390687 | 8.1:-31926098 | MS.gene44213:CDS |
| ACCACCGCCATTCCGGTTCC+TGG | 0.392452 | 8.1:+31926248 | None:intergenic |
| CCTCTCCCGCCGCCGCACCT+TGG | 0.396404 | 8.1:-31927136 | MS.gene44213:CDS |
| CTCTGGAAGCAGACGTGATC+AGG | 0.400093 | 8.1:-31926190 | MS.gene44213:CDS |
| TATCCATATGAGCCCATATA+AGG | 0.400182 | 8.1:+31926018 | None:intergenic |
| ACAAACTGTGGAACAAATCT+TGG | 0.401130 | 8.1:+31926102 | None:intergenic |
| CAACTCATCAGAAAACTTAT+CGG | 0.402114 | 8.1:-31926443 | MS.gene44213:CDS |
| TGGGATTGGTGGCAGTGGCG+GGG | 0.402414 | 8.1:+31926041 | None:intergenic |
| GGTGGTGATGGCGGTGGTGG+TGG | 0.410660 | 8.1:+31926873 | None:intergenic |
| GCCATCACCACCACAGGAAT+TGG | 0.412805 | 8.1:-31926862 | MS.gene44213:CDS |
| GCGGCGGAGGAAGGAGGAGG+AGG | 0.419591 | 8.1:+31927059 | None:intergenic |
| TGATCAGGACCGCGGAAATC+AGG | 0.421066 | 8.1:-31926175 | MS.gene44213:CDS |
| TGTGGTGGTGATGGCGGTGG+TGG | 0.424964 | 8.1:+31926870 | None:intergenic |
| TGCTGCTGCTTCTTCGGTCA+TGG | 0.429405 | 8.1:-31926949 | MS.gene44213:CDS |
| GGCGGGAGAGGAAGCGTTCA+TGG | 0.432822 | 8.1:+31927148 | None:intergenic |
| CTCTCCTCAGAAGCAAGTTA+AGG | 0.433186 | 8.1:-31926499 | MS.gene44213:CDS |
| TGCACAAACGGTACACTTCT+CGG | 0.433948 | 8.1:+31925869 | None:intergenic |
| CGATTTCGCCGGAGCTTTGG+CGG | 0.441633 | 8.1:+31926896 | None:intergenic |
| GGAATTGGTGAAACCTTCCT+TGG | 0.443310 | 8.1:-31926847 | MS.gene44213:CDS |
| ACCTGAAATAGTAGTCAATC+TGG | 0.445908 | 8.1:+31925783 | None:intergenic |
| ATCTGAATCCGCCAAAGCTC+CGG | 0.446417 | 8.1:-31926904 | MS.gene44213:CDS |
| TGACAACATTCAGATTGTAT+TGG | 0.447780 | 8.1:-31924605 | MS.gene44213:CDS |
| TTCATCTGTTGTTGAAGTGC+AGG | 0.450747 | 8.1:-31924569 | None:intergenic |
| GCGCAGACATTTGTGGCGGC+TGG | 0.450914 | 8.1:+31926385 | None:intergenic |
| GAAGACATCGACAACACTTC+CGG | 0.453122 | 8.1:-31927005 | MS.gene44213:CDS |
| ACAGCGGCGGAGGAAGGAGG+AGG | 0.454286 | 8.1:+31927056 | None:intergenic |
| TCGGCGCTGAGGCTGATCAT+TGG | 0.454767 | 8.1:+31926278 | None:intergenic |
| TTGGAGGGTTTACTCCAAAC+AGG | 0.455281 | 8.1:+31926972 | None:intergenic |
| CAGCGGTGGAGGCAACAATC+TGG | 0.459815 | 8.1:+31927111 | None:intergenic |
| TGGCTCCAAGGTGCGGCGGC+GGG | 0.460627 | 8.1:+31927131 | None:intergenic |
| GCCGAAATTCATCCAGGAAC+CGG | 0.461700 | 8.1:-31926260 | MS.gene44213:CDS |
| GTTCCTCTAAATTTAATAGC+AGG | 0.461861 | 8.1:-31925599 | MS.gene44213:CDS |
| GGTTTCGTTGCTGTCCCACC+AGG | 0.463812 | 8.1:-31926357 | MS.gene44213:CDS |
| GACCGAAGAAGCAGCAGCAT+TGG | 0.465776 | 8.1:+31926953 | None:intergenic |
| GAGGAAGCGTTCATGGCCAT+TGG | 0.466060 | 8.1:+31927155 | None:intergenic |
| GAAGATATCGGTTGCACAAA+CGG | 0.466726 | 8.1:+31925857 | None:intergenic |
| CCCATATAAGGTGGGATTGG+TGG | 0.468438 | 8.1:+31926030 | None:intergenic |
| CCTTGAGGCGCAGACATTTG+TGG | 0.469144 | 8.1:+31926378 | None:intergenic |
| TAGTATTGGGCATGATTAGT+AGG | 0.473060 | 8.1:+31926066 | None:intergenic |
| TTGAGCAGAGTTATGATTGT+GGG | 0.478241 | 8.1:+31926332 | None:intergenic |
| ATCGACCTTGCCTCAATCGC+AGG | 0.478474 | 8.1:-31926820 | MS.gene44213:intron |
| ATGGGCTCATATGGATATCA+TGG | 0.478647 | 8.1:-31926012 | MS.gene44213:intron |
| CGAAGAAGCAGCAGCATTGG+AGG | 0.481797 | 8.1:+31926956 | None:intergenic |
| TACGGCGGAAGCAGCGGTGG+AGG | 0.484516 | 8.1:+31927100 | None:intergenic |
| CCACCAATCCCACCTTATAT+GGG | 0.484922 | 8.1:-31926030 | MS.gene44213:CDS |
| TTAGTATGCAACTCAGAATC+CGG | 0.489983 | 8.1:+31925815 | None:intergenic |
| GAGGAAGGAGGAGGAGGTGA+CGG | 0.494008 | 8.1:+31927065 | None:intergenic |
| GGAACATGGATGATCAGGGC+TGG | 0.494066 | 8.1:-31925622 | MS.gene44213:CDS |
| CTAACGCTTCAAATGATGTA+TGG | 0.503281 | 8.1:-31925914 | MS.gene44213:CDS |
| GAAAGTGTCGACAGCGGCGG+AGG | 0.507299 | 8.1:+31927046 | None:intergenic |
| CGGTCATGGATGCTGACTCA+TGG | 0.507318 | 8.1:-31926935 | MS.gene44213:CDS |
| ACCAATTCCTGTGGTGGTGA+TGG | 0.511057 | 8.1:+31926861 | None:intergenic |
| GAGCCCATATAAGGTGGGAT+TGG | 0.512163 | 8.1:+31926027 | None:intergenic |
| GTGTCGACAGCGGCGGAGGA+AGG | 0.512183 | 8.1:+31927050 | None:intergenic |
| GTCTTCCGCCGCCTCAGTGA+CGG | 0.512716 | 8.1:+31927022 | None:intergenic |
| TCCTGTGGTGGTGATGGCGG+TGG | 0.513238 | 8.1:+31926867 | None:intergenic |
| TTGGGCACAAATCCAGCTCT+TGG | 0.515928 | 8.1:+31926297 | None:intergenic |
| GTATCCTTAACTTGCTTCTG+AGG | 0.520478 | 8.1:+31926495 | None:intergenic |
| ACCACCGCCATCACCACCAC+AGG | 0.524419 | 8.1:-31926868 | MS.gene44213:CDS |
| CATACATCATTTGAAGCGTT+AGG | 0.525907 | 8.1:+31925915 | None:intergenic |
| TCCAGGAACCGGAATGGCGG+TGG | 0.529103 | 8.1:-31926249 | MS.gene44213:CDS |
| CTCAGCGCCGAAATTCATCC+AGG | 0.529121 | 8.1:-31926266 | MS.gene44213:CDS |
| AGGTACGGCGGAAGCAGCGG+TGG | 0.532026 | 8.1:+31927097 | None:intergenic |
| CCACAAATGTCTGCGCCTCA+AGG | 0.534512 | 8.1:-31926378 | MS.gene44213:CDS |
| ATGGAACATCTACCAAGAGC+TGG | 0.535798 | 8.1:-31926309 | MS.gene44213:CDS |
| GCATGATTAGTAGGCGGTGG+AGG | 0.541418 | 8.1:+31926075 | None:intergenic |
| AATTCAAACACGTCTTCCAA+TGG | 0.542364 | 8.1:-31926414 | MS.gene44213:CDS |
| GGTGGTGGTGGCGATTTCGC+CGG | 0.543934 | 8.1:+31926885 | None:intergenic |
| TAAGGTGGGATTGGTGGCAG+TGG | 0.544598 | 8.1:+31926036 | None:intergenic |
| GAACATGGATGATCAGGGCT+GGG | 0.545097 | 8.1:-31925621 | MS.gene44213:CDS |
| CAGACATTTGTGGCGGCTGG+CGG | 0.546833 | 8.1:+31926388 | None:intergenic |
| TGCAACTCAGAATCCGGAGG+TGG | 0.551141 | 8.1:+31925821 | None:intergenic |
| GCAACGACACATACTTGAAG+AGG | 0.552646 | 8.1:-31925643 | MS.gene44213:CDS |
| CTCGGAGGCTCCACATGCAA+AGG | 0.554785 | 8.1:+31925887 | None:intergenic |
| TCGACAGCGGCGGAGGAAGG+AGG | 0.564961 | 8.1:+31927053 | None:intergenic |
| CCATATGAGCCCATATAAGG+TGG | 0.568642 | 8.1:+31926021 | None:intergenic |
| AAGCAAGTTAAGGATACTGC+AGG | 0.569915 | 8.1:-31926489 | MS.gene44213:CDS |
| TTGGCGGATTCAGATAAAGC+AGG | 0.573000 | 8.1:+31926912 | None:intergenic |
| TGGGCATGATTAGTAGGCGG+TGG | 0.573030 | 8.1:+31926072 | None:intergenic |
| GGAGGTGACGGCGATGAATG+AGG | 0.573341 | 8.1:+31927077 | None:intergenic |
| TTTCGCCGTCACTGAGGCGG+CGG | 0.577187 | 8.1:-31927027 | MS.gene44213:CDS |
| AACAATCTGGCTCCAAGGTG+CGG | 0.577674 | 8.1:+31927124 | None:intergenic |
| GAGGCAACAATCTGGCTCCA+AGG | 0.579221 | 8.1:+31927119 | None:intergenic |
| GGTCTACAACCACGCGGAGA+TGG | 0.584916 | 8.1:-31926228 | MS.gene44213:CDS |
| CCGGTGGTAAGAGACCTGTT+TGG | 0.585862 | 8.1:-31926986 | MS.gene44213:CDS |
| AAGAGGAACATGGATGATCA+GGG | 0.588462 | 8.1:-31925626 | MS.gene44213:CDS |
| GGTTTCACCAATTCCTGTGG+TGG | 0.591849 | 8.1:+31926855 | None:intergenic |
| CACTTTCGCCGTCACTGAGG+CGG | 0.594778 | 8.1:-31927030 | MS.gene44213:CDS |
| CTGGATGAATTTCGGCGCTG+AGG | 0.595383 | 8.1:+31926267 | None:intergenic |
| CACATACTTGAAGAGGAACA+TGG | 0.596708 | 8.1:-31925636 | MS.gene44213:CDS |
| AGGACCGCGGAAATCAGGAC+TGG | 0.598875 | 8.1:-31926170 | MS.gene44213:CDS |
| ATGAGGTACGGCGGAAGCAG+CGG | 0.604517 | 8.1:+31927094 | None:intergenic |
| GAGTTATGATTGTGGGACCC+TGG | 0.608836 | 8.1:+31926339 | None:intergenic |
| GTATGGTCCACCTTTGCATG+TGG | 0.613005 | 8.1:-31925897 | MS.gene44213:CDS |
| AATTCATCCAGGAACCGGAA+TGG | 0.615009 | 8.1:-31926255 | MS.gene44213:CDS |
| TGACGGCGATGAATGAGGTA+CGG | 0.620582 | 8.1:+31927082 | None:intergenic |
| GAAGAAGCAGCAGCATTGGA+GGG | 0.621002 | 8.1:+31926957 | None:intergenic |
| CCAAACAGGTCTCTTACCAC+CGG | 0.621816 | 8.1:+31926986 | None:intergenic |
| GGAGGCTCCACATGCAAAGG+TGG | 0.622207 | 8.1:+31925890 | None:intergenic |
| CATATGAGCCCATATAAGGT+GGG | 0.622209 | 8.1:+31926022 | None:intergenic |
| TTTGAGCAGAGTTATGATTG+TGG | 0.622984 | 8.1:+31926331 | None:intergenic |
| CATTCCAGTCCTGATTTCCG+CGG | 0.624273 | 8.1:+31926166 | None:intergenic |
| AAATACCTGCGATTGAGGCA+AGG | 0.626925 | 8.1:+31926815 | None:intergenic |
| TCAAACACGTCTTCCAATGG+AGG | 0.628375 | 8.1:-31926411 | MS.gene44213:CDS |
| TATGATTGTGGGACCCTGGT+GGG | 0.628962 | 8.1:+31926343 | None:intergenic |
| AGGCAAGGTCGATAAATCCA+AGG | 0.629817 | 8.1:+31926830 | None:intergenic |
| TGAGGCGCAGACATTTGTGG+CGG | 0.632231 | 8.1:+31926381 | None:intergenic |
| GGCGAAAGTGTCGACAGCGG+CGG | 0.635606 | 8.1:+31927043 | None:intergenic |
| GAAGGTTTCACCAATTCCTG+TGG | 0.639283 | 8.1:+31926852 | None:intergenic |
| AAGGTCGATAAATCCAAGGA+AGG | 0.645541 | 8.1:+31926834 | None:intergenic |
| TCATCCAGGAACCGGAATGG+CGG | 0.654453 | 8.1:-31926252 | MS.gene44213:CDS |
| GTTTCGTTGCTGTCCCACCA+GGG | 0.657439 | 8.1:-31926356 | MS.gene44213:CDS |
| AATCTGGCTCCAAGGTGCGG+CGG | 0.658713 | 8.1:+31927127 | None:intergenic |
| AATTCCTGTGGTGGTGATGG+CGG | 0.664267 | 8.1:+31926864 | None:intergenic |
| GTATGCAACTCAGAATCCGG+AGG | 0.681468 | 8.1:+31925818 | None:intergenic |
| AGCAGACGTGATCAGGACCG+CGG | 0.696086 | 8.1:-31926183 | MS.gene44213:CDS |
| GACATCGACAACACTTCCGG+TGG | 0.701044 | 8.1:-31927002 | MS.gene44213:CDS |
| GACGGCGAAAGTGTCGACAG+CGG | 0.707075 | 8.1:+31927040 | None:intergenic |
| CGACACTTTCGCCGTCACTG+AGG | 0.708576 | 8.1:-31927033 | MS.gene44213:CDS |
| GGTGGAGGCCTTACAAACTG+TGG | 0.712069 | 8.1:+31926090 | None:intergenic |
| CGGCGATGAATGAGGTACGG+CGG | 0.718688 | 8.1:+31927085 | None:intergenic |
| TATTGGGCATGATTAGTAGG+CGG | 0.723347 | 8.1:+31926069 | None:intergenic |
| GGGACAGCAACGAAACCTTG+AGG | 0.727311 | 8.1:+31926363 | None:intergenic |
| TTATGATTGTGGGACCCTGG+TGG | 0.738203 | 8.1:+31926342 | None:intergenic |
| TGGTGAGAACCATCTCCGCG+TGG | 0.763757 | 8.1:+31926219 | None:intergenic |
| ACAAACGGTACACTTCTCGG+AGG | 0.802512 | 8.1:+31925872 | None:intergenic |
| GGCGGTGGTCTACAACCACG+CGG | 0.809396 | 8.1:-31926234 | MS.gene44213:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTACTATTTTTTGATT+TGG | - | chr8.1:31926733-31926752 | MS.gene44213:intron | 10.0% |
| !!! | ATTGTAATTTTTTTAAATAG+GGG | + | chr8.1:31926447-31926466 | None:intergenic | 10.0% |
| !! | ATAAAATTAGAAAATATGAG+TGG | - | chr8.1:31926814-31926833 | MS.gene44213:intron | 15.0% |
| !! | ATTCAATAACAATTTGTATT+AGG | - | chr8.1:31926376-31926395 | MS.gene44213:CDS | 15.0% |
| !! | CAAAACAATAAAATGAAAAT+TGG | + | chr8.1:31925987-31926006 | None:intergenic | 15.0% |
| !! | GATAATATCAATTATAATGT+GGG | - | chr8.1:31927029-31927048 | MS.gene44213:CDS | 15.0% |
| !! | TCAAAAGATTATTAATACAA+AGG | + | chr8.1:31926698-31926717 | None:intergenic | 15.0% |
| !! | TGATAATATCAATTATAATG+TGG | - | chr8.1:31927028-31927047 | MS.gene44213:CDS | 15.0% |
| !! | TTTAATTAAATCTTTGACAT+GGG | - | chr8.1:31926188-31926207 | MS.gene44213:CDS | 15.0% |
| !!! | GTATTAATAATCTTTTGATA+TGG | - | chr8.1:31926700-31926719 | MS.gene44213:intron | 15.0% |
| !!! | TTGTAATTTTTTTAAATAGG+GGG | + | chr8.1:31926446-31926465 | None:intergenic | 15.0% |
| !!! | TTTTAATTAAATCTTTGACA+TGG | - | chr8.1:31926187-31926206 | MS.gene44213:CDS | 15.0% |
| !!! | TTTTGTCATTTTTTTTCATA+GGG | - | chr8.1:31926621-31926640 | MS.gene44213:intron | 15.0% |
| !! | AAAAATATTGCAGAAGATAT+CGG | + | chr8.1:31925880-31925899 | None:intergenic | 20.0% |
| !! | AATAAATAAGCAACTAAAGT+GGG | + | chr8.1:31924939-31924958 | None:intergenic | 20.0% |
| !! | ATTCAATAAAGTAAGTTGTT+TGG | - | chr8.1:31926146-31926165 | MS.gene44213:CDS | 20.0% |
| !! | GCATATAACTGAAATATATT+TGG | - | chr8.1:31925049-31925068 | MS.gene44213:intron | 20.0% |
| !! | TAATAAATAAGCAACTAAAG+TGG | + | chr8.1:31924940-31924959 | None:intergenic | 20.0% |
| !!! | AATATATTTGGAATTGTTAC+TGG | - | chr8.1:31925061-31925080 | MS.gene44213:intron | 20.0% |
| !!! | CTTTTGTCATTTTTTTTCAT+AGG | - | chr8.1:31926620-31926639 | MS.gene44213:intron | 20.0% |
| !!! | GCTCATAATAGAAATTTTAA+CGG | - | chr8.1:31925578-31925597 | MS.gene44213:intron | 20.0% |
| !!! | TTCCTTTATTTATCAAGTTA+GGG | - | chr8.1:31924992-31925011 | MS.gene44213:intron | 20.0% |
| !!! | TTTGTCATTTTTTTTCATAG+GGG | - | chr8.1:31926622-31926641 | MS.gene44213:intron | 20.0% |
| ! | AAATTAGAAAATATGAGTGG+AGG | - | chr8.1:31926817-31926836 | MS.gene44213:intron | 25.0% |
| ! | AACCCTAACTTGATAAATAA+AGG | + | chr8.1:31924997-31925016 | None:intergenic | 25.0% |
| ! | AAGTGAAAATCAAAAGGATT+TGG | + | chr8.1:31926925-31926944 | None:intergenic | 25.0% |
| ! | AATCCTGCTATTAAATTTAG+AGG | + | chr8.1:31926129-31926148 | None:intergenic | 25.0% |
| ! | ATCATATTTCCCTTATGTTA+GGG | - | chr8.1:31926563-31926582 | MS.gene44213:intron | 25.0% |
| ! | GTGAAAAAGTGAAAATCAAA+AGG | + | chr8.1:31926931-31926950 | None:intergenic | 25.0% |
| ! | TAGAAGAACAATCATAAAAG+AGG | + | chr8.1:31926782-31926801 | None:intergenic | 25.0% |
| ! | TGACATAATCAATTTATCGT+TGG | - | chr8.1:31926262-31926281 | MS.gene44213:CDS | 25.0% |
| !! | GTTCCTTTATTTATCAAGTT+AGG | - | chr8.1:31924991-31925010 | MS.gene44213:intron | 25.0% |
| !! | TTAATCAATATCTTTTACCC+TGG | - | chr8.1:31926306-31926325 | MS.gene44213:CDS | 25.0% |
| !! | TTGTTTGGTGATAATTGATT+TGG | - | chr8.1:31926161-31926180 | MS.gene44213:CDS | 25.0% |
| !!! | AAAATCGCAACTTTTTGAAA+CGG | + | chr8.1:31926421-31926440 | None:intergenic | 25.0% |
| !!! | AATGCATTTTTTTGTCTCTT+AGG | - | chr8.1:31927081-31927100 | MS.gene44213:CDS | 25.0% |
| !!! | TGTTTTGAGTGTTGATTTTA+GGG | - | chr8.1:31925182-31925201 | MS.gene44213:intron | 25.0% |
| !!! | TTCTGTTTTTGTTATGTTTG+TGG | - | chr8.1:31925140-31925159 | MS.gene44213:intron | 25.0% |
| !!! | TTGTCATTTTTTTTCATAGG+GGG | - | chr8.1:31926623-31926642 | MS.gene44213:intron | 25.0% |
| !!! | TTGTTTTGAGTGTTGATTTT+AGG | - | chr8.1:31925181-31925200 | MS.gene44213:intron | 25.0% |
| CAACTCATCAGAAAACTTAT+CGG | - | chr8.1:31925279-31925298 | MS.gene44213:intron | 30.0% | |
| GATCATATTTCCCTTATGTT+AGG | - | chr8.1:31926562-31926581 | MS.gene44213:intron | 30.0% | |
| GTTCCTCTAAATTTAATAGC+AGG | - | chr8.1:31926123-31926142 | MS.gene44213:CDS | 30.0% | |
| TCATATTTCCCTTATGTTAG+GGG | - | chr8.1:31926564-31926583 | MS.gene44213:intron | 30.0% | |
| TCGCAACTTCTTAAAACTTA+AGG | - | chr8.1:31926653-31926672 | MS.gene44213:intron | 30.0% | |
| TGACAACATTCAGATTGTAT+TGG | - | chr8.1:31927117-31927136 | MS.gene44213:CDS | 30.0% | |
| TTAACGGTAGAGACAATTAT+AGG | - | chr8.1:31925594-31925613 | MS.gene44213:CDS | 30.0% | |
| TTCAGGTAACGTTTATCTAT+TGG | - | chr8.1:31925955-31925974 | MS.gene44213:intron | 30.0% | |
| ! | GTTTCAAAAAGTTGCGATTT+TGG | - | chr8.1:31926420-31926439 | MS.gene44213:CDS | 30.0% |
| !!! | AAATCGCAACTTTTTGAAAC+GGG | + | chr8.1:31926420-31926439 | None:intergenic | 30.0% |
| !!! | GTTTTAAGAAGTTGCGATTT+TGG | + | chr8.1:31926650-31926669 | None:intergenic | 30.0% |
| !!! | TGTCATTTTTTTTCATAGGG+GGG | - | chr8.1:31926624-31926643 | MS.gene44213:intron | 30.0% |
| AACAACGATCTTCAAATCCA+GGG | + | chr8.1:31926326-31926345 | None:intergenic | 35.0% | |
| AATTCAAACACGTCTTCCAA+TGG | - | chr8.1:31925308-31925327 | MS.gene44213:intron | 35.0% | |
| ACAAACTGTGGAACAAATCT+TGG | + | chr8.1:31925623-31925642 | None:intergenic | 35.0% | |
| ACCAGATTGACTACTATTTC+AGG | - | chr8.1:31925938-31925957 | MS.gene44213:intron | 35.0% | |
| ACCTGAAATAGTAGTCAATC+TGG | + | chr8.1:31925942-31925961 | None:intergenic | 35.0% | |
| AGAGCATATTTCCCTAAACA+GGG | - | chr8.1:31926593-31926612 | MS.gene44213:intron | 35.0% | |
| CAATCATAACTCTGCTCAAA+TGG | - | chr8.1:31925394-31925413 | MS.gene44213:intron | 35.0% | |
| CATATTTCCCTTATGTTAGG+GGG | - | chr8.1:31926565-31926584 | MS.gene44213:intron | 35.0% | |
| CTAACGCTTCAAATGATGTA+TGG | - | chr8.1:31925808-31925827 | MS.gene44213:CDS | 35.0% | |
| GAAAAAAATACCTGCGATTG+AGG | + | chr8.1:31924915-31924934 | None:intergenic | 35.0% | |
| TATCCATATGAGCCCATATA+AGG | + | chr8.1:31925707-31925726 | None:intergenic | 35.0% | |
| TTAGTATGCAACTCAGAATC+CGG | + | chr8.1:31925910-31925929 | None:intergenic | 35.0% | |
| TTGAGCAGAGTTATGATTGT+GGG | + | chr8.1:31925393-31925412 | None:intergenic | 35.0% | |
| TTTGAGCAGAGTTATGATTG+TGG | + | chr8.1:31925394-31925413 | None:intergenic | 35.0% | |
| ! | AAGAGCATATTTCCCTAAAC+AGG | - | chr8.1:31926592-31926611 | MS.gene44213:intron | 35.0% |
| ! | CAACTTTTTGCGAAGATAAG+GGG | - | chr8.1:31926533-31926552 | MS.gene44213:intron | 35.0% |
| ! | CATACATCATTTGAAGCGTT+AGG | + | chr8.1:31925810-31925829 | None:intergenic | 35.0% |
| ! | CGATAAGTTTTCTGATGAGT+TGG | + | chr8.1:31925281-31925300 | None:intergenic | 35.0% |
| ! | GATTTGTTCCACAGTTTGTA+AGG | - | chr8.1:31925624-31925643 | MS.gene44213:CDS | 35.0% |
| ! | GCAACTTTTTGCGAAGATAA+GGG | - | chr8.1:31926532-31926551 | MS.gene44213:intron | 35.0% |
| ! | TAGTATTGGGCATGATTAGT+AGG | + | chr8.1:31925659-31925678 | None:intergenic | 35.0% |
| !!! | TGCAATATTTTTTCCACCTC+CGG | - | chr8.1:31925888-31925907 | MS.gene44213:CDS | 35.0% |
| AAGAGGAACATGGATGATCA+GGG | - | chr8.1:31926096-31926115 | MS.gene44213:CDS | 40.0% | |
| AAGCAAGTTAAGGATACTGC+AGG | - | chr8.1:31925233-31925252 | MS.gene44213:intron | 40.0% | |
| AAGGTCGATAAATCCAAGGA+AGG | + | chr8.1:31924891-31924910 | None:intergenic | 40.0% | |
| ACAAAAGTGACCCCTGTTTA+GGG | + | chr8.1:31926607-31926626 | None:intergenic | 40.0% | |
| ATGGGCTCATATGGATATCA+TGG | - | chr8.1:31925710-31925729 | MS.gene44213:intron | 40.0% | |
| CAACAACGATCTTCAAATCC+AGG | + | chr8.1:31926327-31926346 | None:intergenic | 40.0% | |
| CACATACTTGAAGAGGAACA+TGG | - | chr8.1:31926086-31926105 | MS.gene44213:CDS | 40.0% | |
| CATATGAGCCCATATAAGGT+GGG | + | chr8.1:31925703-31925722 | None:intergenic | 40.0% | |
| GAGCATATTTCCCTAAACAG+GGG | - | chr8.1:31926594-31926613 | MS.gene44213:intron | 40.0% | |
| GTCTGCTTCCAGAGTTAAAA+TGG | + | chr8.1:31925526-31925545 | None:intergenic | 40.0% | |
| TATTGGGCATGATTAGTAGG+CGG | + | chr8.1:31925656-31925675 | None:intergenic | 40.0% | |
| TCACTGCAAAAGACAAGTTG+TGG | + | chr8.1:31926048-31926067 | None:intergenic | 40.0% | |
| ! | CGCAACTTTTTGCGAAGATA+AGG | - | chr8.1:31926531-31926550 | MS.gene44213:intron | 40.0% |
| ! | CTTTTGACCCCCTAACATAA+GGG | + | chr8.1:31926575-31926594 | None:intergenic | 40.0% |
| ! | GAAGATATCGGTTGCACAAA+CGG | + | chr8.1:31925868-31925887 | None:intergenic | 40.0% |
| ! | TCTTTTGACCCCCTAACATA+AGG | + | chr8.1:31926576-31926595 | None:intergenic | 40.0% |
| !! | GTATCCTTAACTTGCTTCTG+AGG | + | chr8.1:31925230-31925249 | None:intergenic | 40.0% |
| !!! | GAGTGTTGATTTTAGGGTAC+TGG | - | chr8.1:31925188-31925207 | MS.gene44213:intron | 40.0% |
| !!! | GGTTCTCACCATTTTAACTC+TGG | - | chr8.1:31925515-31925534 | MS.gene44213:intron | 40.0% |
| !!! | TCAGCAATTTTGGGACGAAA+GGG | + | chr8.1:31926476-31926495 | None:intergenic | 40.0% |
| AAATACCTGCGATTGAGGCA+AGG | + | chr8.1:31924910-31924929 | None:intergenic | 45.0% | |
| AATTCATCCAGGAACCGGAA+TGG | - | chr8.1:31925467-31925486 | MS.gene44213:intron | 45.0% | |
| AGGCAAGGTCGATAAATCCA+AGG | + | chr8.1:31924895-31924914 | None:intergenic | 45.0% | |
| ATGGAACATCTACCAAGAGC+TGG | - | chr8.1:31925413-31925432 | MS.gene44213:intron | 45.0% | |
| CCACCAATCCCACCTTATAT+GGG | - | chr8.1:31925692-31925711 | MS.gene44213:intron | 45.0% | |
| CCACCTTATATGGGCTCATA+TGG | - | chr8.1:31925701-31925720 | MS.gene44213:intron | 45.0% | |
| CCATATGAGCCCATATAAGG+TGG | + | chr8.1:31925704-31925723 | None:intergenic | 45.0% | |
| CTCTCCTCAGAAGCAAGTTA+AGG | - | chr8.1:31925223-31925242 | MS.gene44213:intron | 45.0% | |
| GAAGACATCGACAACACTTC+CGG | - | chr8.1:31924717-31924736 | MS.gene44213:intron | 45.0% | |
| GAAGAGGAACATGGATGATC+AGG | - | chr8.1:31926095-31926114 | MS.gene44213:CDS | 45.0% | |
| GAAGGTTTCACCAATTCCTG+TGG | + | chr8.1:31924873-31924892 | None:intergenic | 45.0% | |
| GACAAAAGTGACCCCTGTTT+AGG | + | chr8.1:31926608-31926627 | None:intergenic | 45.0% | |
| GCAACGACACATACTTGAAG+AGG | - | chr8.1:31926079-31926098 | MS.gene44213:CDS | 45.0% | |
| GGAATTGGTGAAACCTTCCT+TGG | - | chr8.1:31924875-31924894 | MS.gene44213:intron | 45.0% | |
| TCAAACACGTCTTCCAATGG+AGG | - | chr8.1:31925311-31925330 | MS.gene44213:intron | 45.0% | |
| TCCGGTTCCTGGATGAATTT+CGG | + | chr8.1:31925466-31925485 | None:intergenic | 45.0% | |
| TGCACAAACGGTACACTTCT+CGG | + | chr8.1:31925856-31925875 | None:intergenic | 45.0% | |
| TTGGAGGGTTTACTCCAAAC+AGG | + | chr8.1:31924753-31924772 | None:intergenic | 45.0% | |
| ! | GCGACTATGACCCCTTTTTA+GGG | + | chr8.1:31926514-31926533 | None:intergenic | 45.0% |
| ! | GGCGTCTTCTCAGCAATTTT+GGG | + | chr8.1:31926485-31926504 | None:intergenic | 45.0% |
| ! | TGCGACTATGACCCCTTTTT+AGG | + | chr8.1:31926515-31926534 | None:intergenic | 45.0% |
| ! | TGGCGTCTTCTCAGCAATTT+TGG | + | chr8.1:31926486-31926505 | None:intergenic | 45.0% |
| !! | TTGGCGGATTCAGATAAAGC+AGG | + | chr8.1:31924813-31924832 | None:intergenic | 45.0% |
| !!! | CAGCAATTTTGGGACGAAAG+GGG | + | chr8.1:31926475-31926494 | None:intergenic | 45.0% |
| !!! | CTCAGCAATTTTGGGACGAA+AGG | + | chr8.1:31926477-31926496 | None:intergenic | 45.0% |
| !!! | AAATTGTAATTTTTTTAAAT+AGG | + | chr8.1:31926449-31926468 | None:intergenic | 5.0% |
| !!! | AATTGTAATTTTTTTAAATA+GGG | + | chr8.1:31926448-31926467 | None:intergenic | 5.0% |
| !!! | ATTTAAAAAAATTACAATTT+TGG | - | chr8.1:31926449-31926468 | MS.gene44213:CDS | 5.0% |
| ACAAACGGTACACTTCTCGG+AGG | + | chr8.1:31925853-31925872 | None:intergenic | 50.0% | |
| ACGCCACGTGTCCCTAAAAA+GGG | - | chr8.1:31926500-31926519 | MS.gene44213:CDS | 50.0% | |
| ATCTGAATCCGCCAAAGCTC+CGG | - | chr8.1:31924818-31924837 | MS.gene44213:intron | 50.0% | |
| CATTCCAGTCCTGATTTCCG+CGG | + | chr8.1:31925559-31925578 | None:intergenic | 50.0% | |
| CCAAACAGGTCTCTTACCAC+CGG | + | chr8.1:31924739-31924758 | None:intergenic | 50.0% | |
| CCCATATAAGGTGGGATTGG+TGG | + | chr8.1:31925695-31925714 | None:intergenic | 50.0% | |
| GAACATGGATGATCAGGGCT+GGG | - | chr8.1:31926101-31926120 | MS.gene44213:CDS | 50.0% | |
| GAGCCCATATAAGGTGGGAT+TGG | + | chr8.1:31925698-31925717 | None:intergenic | 50.0% | |
| GAGTTATGATTGTGGGACCC+TGG | + | chr8.1:31925386-31925405 | None:intergenic | 50.0% | |
| GCCACCAATCCCACCTTATA+TGG | - | chr8.1:31925691-31925710 | MS.gene44213:intron | 50.0% | |
| GCCGAAATTCATCCAGGAAC+CGG | - | chr8.1:31925462-31925481 | MS.gene44213:intron | 50.0% | |
| GGTTTCACCAATTCCTGTGG+TGG | + | chr8.1:31924870-31924889 | None:intergenic | 50.0% | |
| GTATGCAACTCAGAATCCGG+AGG | + | chr8.1:31925907-31925926 | None:intergenic | 50.0% | |
| GTATGGTCCACCTTTGCATG+TGG | - | chr8.1:31925825-31925844 | MS.gene44213:CDS | 50.0% | |
| TATGATTGTGGGACCCTGGT+GGG | + | chr8.1:31925382-31925401 | None:intergenic | 50.0% | |
| TGACGGCGATGAATGAGGTA+CGG | + | chr8.1:31924643-31924662 | None:intergenic | 50.0% | |
| TTATGATTGTGGGACCCTGG+TGG | + | chr8.1:31925383-31925402 | None:intergenic | 50.0% | |
| TTGGGCACAAATCCAGCTCT+TGG | + | chr8.1:31925428-31925447 | None:intergenic | 50.0% | |
| ! | AACAATCTGGCTCCAAGGTG+CGG | + | chr8.1:31924601-31924620 | None:intergenic | 50.0% |
| ! | ACCAATTCCTGTGGTGGTGA+TGG | + | chr8.1:31924864-31924883 | None:intergenic | 50.0% |
| ! | CTCCAATGCTGCTGCTTCTT+CGG | - | chr8.1:31924767-31924786 | MS.gene44213:intron | 50.0% |
| ! | GAAGAAGCAGCAGCATTGGA+GGG | + | chr8.1:31924768-31924787 | None:intergenic | 50.0% |
| !! | AATTCCTGTGGTGGTGATGG+CGG | + | chr8.1:31924861-31924880 | None:intergenic | 50.0% |
| ATCGACCTTGCCTCAATCGC+AGG | - | chr8.1:31924902-31924921 | MS.gene44213:intron | 55.0% | |
| CCACAAATGTCTGCGCCTCA+AGG | - | chr8.1:31925344-31925363 | MS.gene44213:intron | 55.0% | |
| CCGGTGGTAAGAGACCTGTT+TGG | - | chr8.1:31924736-31924755 | MS.gene44213:intron | 55.0% | |
| CCTTGAGGCGCAGACATTTG+TGG | + | chr8.1:31925347-31925366 | None:intergenic | 55.0% | |
| CGCCACGTGTCCCTAAAAAG+GGG | - | chr8.1:31926501-31926520 | MS.gene44213:CDS | 55.0% | |
| CTGGATGAATTTCGGCGCTG+AGG | + | chr8.1:31925458-31925477 | None:intergenic | 55.0% | |
| GACATCGACAACACTTCCGG+TGG | - | chr8.1:31924720-31924739 | MS.gene44213:intron | 55.0% | |
| GACCGAAGAAGCAGCAGCAT+TGG | + | chr8.1:31924772-31924791 | None:intergenic | 55.0% | |
| GACGCCACGTGTCCCTAAAA+AGG | - | chr8.1:31926499-31926518 | MS.gene44213:CDS | 55.0% | |
| GCATGATTAGTAGGCGGTGG+AGG | + | chr8.1:31925650-31925669 | None:intergenic | 55.0% | |
| GCCATCACCACCACAGGAAT+TGG | - | chr8.1:31924860-31924879 | MS.gene44213:intron | 55.0% | |
| GGAACATGGATGATCAGGGC+TGG | - | chr8.1:31926100-31926119 | MS.gene44213:CDS | 55.0% | |
| GGGACAGCAACGAAACCTTG+AGG | + | chr8.1:31925362-31925381 | None:intergenic | 55.0% | |
| GGTGGAGGCCTTACAAACTG+TGG | + | chr8.1:31925635-31925654 | None:intergenic | 55.0% | |
| GTTGTAGACCACCGCCATTC+CGG | + | chr8.1:31925484-31925503 | None:intergenic | 55.0% | |
| GTTTCGTTGCTGTCCCACCA+GGG | - | chr8.1:31925366-31925385 | MS.gene44213:intron | 55.0% | |
| TCATCCAGGAACCGGAATGG+CGG | - | chr8.1:31925470-31925489 | MS.gene44213:intron | 55.0% | |
| TGAGGCGCAGACATTTGTGG+CGG | + | chr8.1:31925344-31925363 | None:intergenic | 55.0% | |
| TGATCAGGACCGCGGAAATC+AGG | - | chr8.1:31925547-31925566 | MS.gene44213:intron | 55.0% | |
| TGCAACTCAGAATCCGGAGG+TGG | + | chr8.1:31925904-31925923 | None:intergenic | 55.0% | |
| TGGGCATGATTAGTAGGCGG+TGG | + | chr8.1:31925653-31925672 | None:intergenic | 55.0% | |
| ! | CAGTGGCGGGGGATAGTATT+GGG | + | chr8.1:31925672-31925691 | None:intergenic | 55.0% |
| ! | CGAAGAAGCAGCAGCATTGG+AGG | + | chr8.1:31924769-31924788 | None:intergenic | 55.0% |
| ! | CTCAGCGCCGAAATTCATCC+AGG | - | chr8.1:31925456-31925475 | MS.gene44213:intron | 55.0% |
| ! | CTCTGGAAGCAGACGTGATC+AGG | - | chr8.1:31925532-31925551 | MS.gene44213:intron | 55.0% |
| ! | GAGGCAACAATCTGGCTCCA+AGG | + | chr8.1:31924606-31924625 | None:intergenic | 55.0% |
| ! | TAAGGTGGGATTGGTGGCAG+TGG | + | chr8.1:31925689-31925708 | None:intergenic | 55.0% |
| ! | TGCTGCTGCTTCTTCGGTCA+TGG | - | chr8.1:31924773-31924792 | MS.gene44213:intron | 55.0% |
| !! | CGGTCATGGATGCTGACTCA+TGG | - | chr8.1:31924787-31924806 | MS.gene44213:intron | 55.0% |
| !! | GACCCCTTTTTAGGGACACG+TGG | + | chr8.1:31926506-31926525 | None:intergenic | 55.0% |
| AGCAGACGTGATCAGGACCG+CGG | - | chr8.1:31925539-31925558 | MS.gene44213:intron | 60.0% | |
| AGGACCGCGGAAATCAGGAC+TGG | - | chr8.1:31925552-31925571 | MS.gene44213:intron | 60.0% | |
| ATGAGGTACGGCGGAAGCAG+CGG | + | chr8.1:31924631-31924650 | None:intergenic | 60.0% | |
| CACTTTCGCCGTCACTGAGG+CGG | - | chr8.1:31924692-31924711 | MS.gene44213:intron | 60.0% | |
| CAGACATTTGTGGCGGCTGG+CGG | + | chr8.1:31925337-31925356 | None:intergenic | 60.0% | |
| CAGCGGTGGAGGCAACAATC+TGG | + | chr8.1:31924614-31924633 | None:intergenic | 60.0% | |
| CGACACTTTCGCCGTCACTG+AGG | - | chr8.1:31924689-31924708 | MS.gene44213:intron | 60.0% | |
| CGGCGATGAATGAGGTACGG+CGG | + | chr8.1:31924640-31924659 | None:intergenic | 60.0% | |
| CTCGGAGGCTCCACATGCAA+AGG | + | chr8.1:31925838-31925857 | None:intergenic | 60.0% | |
| GAGGAAGGAGGAGGAGGTGA+CGG | + | chr8.1:31924660-31924679 | None:intergenic | 60.0% | |
| GGAGGCTCCACATGCAAAGG+TGG | + | chr8.1:31925835-31925854 | None:intergenic | 60.0% | |
| GGTCTACAACCACGCGGAGA+TGG | - | chr8.1:31925494-31925513 | MS.gene44213:intron | 60.0% | |
| GGTTTCGTTGCTGTCCCACC+AGG | - | chr8.1:31925365-31925384 | MS.gene44213:intron | 60.0% | |
| TGGCGATTTCGCCGGAGCTT+TGG | + | chr8.1:31924832-31924851 | None:intergenic | 60.0% | |
| TGGTGAGAACCATCTCCGCG+TGG | + | chr8.1:31925506-31925525 | None:intergenic | 60.0% | |
| ! | AATCTGGCTCCAAGGTGCGG+CGG | + | chr8.1:31924598-31924617 | None:intergenic | 60.0% |
| ! | CGATTTCGCCGGAGCTTTGG+CGG | + | chr8.1:31924829-31924848 | None:intergenic | 60.0% |
| ! | CGGCGCTGAGGCTGATCATT+GGG | + | chr8.1:31925446-31925465 | None:intergenic | 60.0% |
| ! | GCAGTGGCGGGGGATAGTAT+TGG | + | chr8.1:31925673-31925692 | None:intergenic | 60.0% |
| ! | GGAGGTGACGGCGATGAATG+AGG | + | chr8.1:31924648-31924667 | None:intergenic | 60.0% |
| ! | TCGGCGCTGAGGCTGATCAT+TGG | + | chr8.1:31925447-31925466 | None:intergenic | 60.0% |
| !! | GACGGCGAAAGTGTCGACAG+CGG | + | chr8.1:31924685-31924704 | None:intergenic | 60.0% |
| ACCACCGCCATCACCACCAC+AGG | - | chr8.1:31924854-31924873 | MS.gene44213:intron | 65.0% | |
| ACCACCGCCATTCCGGTTCC+TGG | + | chr8.1:31925477-31925496 | None:intergenic | 65.0% | |
| GCGCAGACATTTGTGGCGGC+TGG | + | chr8.1:31925340-31925359 | None:intergenic | 65.0% | |
| GGCGGTGGTCTACAACCACG+CGG | - | chr8.1:31925488-31925507 | MS.gene44213:intron | 65.0% | |
| GTCTTCCGCCGCCTCAGTGA+CGG | + | chr8.1:31924703-31924722 | None:intergenic | 65.0% | |
| TCCAGGAACCGGAATGGCGG+TGG | - | chr8.1:31925473-31925492 | MS.gene44213:intron | 65.0% | |
| TTTCGCCGTCACTGAGGCGG+CGG | - | chr8.1:31924695-31924714 | MS.gene44213:intron | 65.0% | |
| ! | GGTGGGATTGGTGGCAGTGG+CGG | + | chr8.1:31925686-31925705 | None:intergenic | 65.0% |
| ! | GTGGGATTGGTGGCAGTGGC+GGG | + | chr8.1:31925685-31925704 | None:intergenic | 65.0% |
| ! | TGGGATTGGTGGCAGTGGCG+GGG | + | chr8.1:31925684-31925703 | None:intergenic | 65.0% |
| !! | GAAAGTGTCGACAGCGGCGG+AGG | + | chr8.1:31924679-31924698 | None:intergenic | 65.0% |
| !! | GGCGAAAGTGTCGACAGCGG+CGG | + | chr8.1:31924682-31924701 | None:intergenic | 65.0% |
| !! | GGCGGGAGAGGAAGCGTTCA+TGG | + | chr8.1:31924577-31924596 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGCGATTTCGC+CGG | + | chr8.1:31924840-31924859 | None:intergenic | 65.0% |
| !! | TCCTGTGGTGGTGATGGCGG+TGG | + | chr8.1:31924858-31924877 | None:intergenic | 65.0% |
| !! | TGTGGTGGTGATGGCGGTGG+TGG | + | chr8.1:31924855-31924874 | None:intergenic | 65.0% |
| ACAGCGGCGGAGGAAGGAGG+AGG | + | chr8.1:31924669-31924688 | None:intergenic | 70.0% | |
| AGGTACGGCGGAAGCAGCGG+TGG | + | chr8.1:31924628-31924647 | None:intergenic | 70.0% | |
| TACGGCGGAAGCAGCGGTGG+AGG | + | chr8.1:31924625-31924644 | None:intergenic | 70.0% | |
| TCGACAGCGGCGGAGGAAGG+AGG | + | chr8.1:31924672-31924691 | None:intergenic | 70.0% | |
| ! | GGGATTGGTGGCAGTGGCGG+GGG | + | chr8.1:31925683-31925702 | None:intergenic | 70.0% |
| ! | GTGTCGACAGCGGCGGAGGA+AGG | + | chr8.1:31924675-31924694 | None:intergenic | 70.0% |
| !! | GGTGGTGATGGCGGTGGTGG+TGG | + | chr8.1:31924852-31924871 | None:intergenic | 70.0% |
| CTGGCTCCAAGGTGCGGCGG+CGG | + | chr8.1:31924595-31924614 | None:intergenic | 75.0% | |
| GCGGCGGAGGAAGGAGGAGG+AGG | + | chr8.1:31924666-31924685 | None:intergenic | 75.0% | |
| TGGCGGCTGGCGGCCTCCAT+TGG | + | chr8.1:31925327-31925346 | None:intergenic | 75.0% | |
| TGGCTCCAAGGTGCGGCGGC+GGG | + | chr8.1:31924594-31924613 | None:intergenic | 75.0% | |
| ! | CCAAGGTGCGGCGGCGGGAG+AGG | + | chr8.1:31924589-31924608 | None:intergenic | 80.0% |
| ! | CCTCTCCCGCCGCCGCACCT+TGG | - | chr8.1:31924586-31924605 | MS.gene44213:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 31924570 | 31927174 | 31924570 | ID=MS.gene44213 |
| chr8.1 | mRNA | 31924570 | 31927174 | 31924570 | ID=MS.gene44213.t1;Parent=MS.gene44213 |
| chr8.1 | exon | 31926821 | 31927174 | 31926821 | ID=MS.gene44213.t1.exon1;Parent=MS.gene44213.t1 |
| chr8.1 | CDS | 31926821 | 31927174 | 31926821 | ID=cds.MS.gene44213.t1;Parent=MS.gene44213.t1 |
| chr8.1 | exon | 31926013 | 31926541 | 31926013 | ID=MS.gene44213.t1.exon2;Parent=MS.gene44213.t1 |
| chr8.1 | CDS | 31926013 | 31926541 | 31926013 | ID=cds.MS.gene44213.t1;Parent=MS.gene44213.t1 |
| chr8.1 | exon | 31925785 | 31925938 | 31925785 | ID=MS.gene44213.t1.exon3;Parent=MS.gene44213.t1 |
| chr8.1 | CDS | 31925785 | 31925938 | 31925785 | ID=cds.MS.gene44213.t1;Parent=MS.gene44213.t1 |
| chr8.1 | exon | 31925589 | 31925679 | 31925589 | ID=MS.gene44213.t1.exon4;Parent=MS.gene44213.t1 |
| chr8.1 | CDS | 31925589 | 31925679 | 31925589 | ID=cds.MS.gene44213.t1;Parent=MS.gene44213.t1 |
| chr8.1 | exon | 31924570 | 31924641 | 31924570 | ID=MS.gene44213.t1.exon5;Parent=MS.gene44213.t1 |
| chr8.1 | CDS | 31924570 | 31924641 | 31924570 | ID=cds.MS.gene44213.t1;Parent=MS.gene44213.t1 |
| Gene Sequence |
| Protein sequence |
