Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44316.t1 | XP_003596890.1 | 94.3 | 87 | 5 | 0 | 52 | 138 | 296 | 382 | 7.80E-35 | 156.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44316.t1 | Q84TG3 | 63.9 | 83 | 30 | 0 | 56 | 138 | 307 | 389 | 2.2e-22 | 106.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44316.t1 | G7IHK3 | 94.3 | 87 | 5 | 0 | 52 | 138 | 296 | 382 | 5.6e-35 | 156.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049850 | MS.gene44316 | 0.816112 | 6.54E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene44316 | 0.814505 | 1.49E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene44316 | 0.811798 | 5.85E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene44316 | 0.814778 | 1.30E-51 | -1.69E-46 |
| MS.gene052582 | MS.gene44316 | 0.80501 | 1.64E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene44316 | 0.803212 | 3.88E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene44316 | 0.801256 | 9.81E-49 | -1.69E-46 |
| MS.gene053396 | MS.gene44316 | 0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene44316 | 0.805491 | 1.30E-49 | -1.69E-46 |
| MS.gene053883 | MS.gene44316 | 0.807524 | 4.85E-50 | -1.69E-46 |
| MS.gene053900 | MS.gene44316 | 0.820169 | 7.90E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene44316 | 0.823663 | 1.23E-53 | -1.69E-46 |
| MS.gene053967 | MS.gene44316 | 0.80971 | 1.65E-50 | -1.69E-46 |
| MS.gene053974 | MS.gene44316 | 0.809353 | 1.97E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene44316 | 0.816385 | 5.68E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene44316 | 0.801862 | 7.37E-49 | -1.69E-46 |
| MS.gene054991 | MS.gene44316 | 0.804743 | 1.87E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene44316 | 0.813113 | 3.02E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene44316 | 0.814949 | 1.19E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene44316 | 0.830218 | 3.32E-55 | -1.69E-46 |
| MS.gene058625 | MS.gene44316 | 0.826444 | 2.70E-54 | -1.69E-46 |
| MS.gene059625 | MS.gene44316 | 0.831565 | 1.55E-55 | -1.69E-46 |
| MS.gene060134 | MS.gene44316 | 0.823704 | 1.20E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44316.t1 | MTR_2g087350 | 94.253 | 87 | 5 | 0 | 52 | 138 | 296 | 382 | 3.59e-49 | 162 |
| MS.gene44316.t1 | MTR_1g056880 | 68.675 | 83 | 26 | 0 | 56 | 138 | 331 | 413 | 9.53e-31 | 114 |
| MS.gene44316.t1 | MTR_7g106340 | 67.470 | 83 | 27 | 0 | 56 | 138 | 315 | 397 | 1.15e-30 | 114 |
| MS.gene44316.t1 | MTR_1g056870 | 66.265 | 83 | 28 | 0 | 56 | 138 | 331 | 413 | 1.48e-28 | 108 |
| MS.gene44316.t1 | MTR_2g019860 | 87.500 | 56 | 7 | 0 | 2 | 57 | 93 | 148 | 2.42e-28 | 109 |
| MS.gene44316.t1 | MTR_1g056840 | 68.116 | 69 | 22 | 0 | 70 | 138 | 319 | 387 | 1.82e-22 | 91.7 |
| MS.gene44316.t1 | MTR_4g119100 | 73.214 | 56 | 15 | 0 | 2 | 57 | 101 | 156 | 5.04e-22 | 91.3 |
| MS.gene44316.t1 | MTR_4g119100 | 73.214 | 56 | 15 | 0 | 2 | 57 | 101 | 156 | 5.67e-22 | 91.3 |
| MS.gene44316.t1 | MTR_4g119100 | 73.214 | 56 | 15 | 0 | 2 | 57 | 100 | 155 | 7.15e-22 | 90.9 |
| MS.gene44316.t1 | MTR_4g051515 | 43.373 | 83 | 47 | 0 | 56 | 138 | 309 | 391 | 1.04e-18 | 81.3 |
| MS.gene44316.t1 | MTR_1g056910 | 39.759 | 83 | 50 | 0 | 56 | 138 | 304 | 386 | 7.80e-15 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44316.t1 | AT2G35930 | 63.855 | 83 | 30 | 0 | 56 | 138 | 307 | 389 | 3.40e-29 | 110 |
| MS.gene44316.t1 | AT3G52450 | 61.446 | 83 | 32 | 0 | 56 | 138 | 331 | 413 | 7.46e-28 | 107 |
| MS.gene44316.t1 | AT3G11840 | 48.193 | 83 | 43 | 0 | 56 | 138 | 344 | 426 | 2.11e-20 | 86.3 |
| MS.gene44316.t1 | AT5G18590 | 67.857 | 56 | 18 | 0 | 2 | 57 | 83 | 138 | 2.41e-19 | 83.6 |
| MS.gene44316.t1 | AT5G18590 | 67.857 | 56 | 18 | 0 | 2 | 57 | 83 | 138 | 2.41e-19 | 83.6 |
Find 24 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATTATGAGTTCTATTTGT+AGG | 0.259477 | 5.4:-23475337 | MS.gene44316:CDS |
| ACTCAAACATGTAAATGATA+TGG | 0.362904 | 5.4:-23475198 | MS.gene44316:CDS |
| AAACTATGACCCTTGCAAAC+TGG | 0.372760 | 5.4:+23476621 | None:intergenic |
| ATAGTGTTTGGTGGTGAATC+TGG | 0.382024 | 5.4:-23476891 | MS.gene44316:CDS |
| AGGAGTTTCAAAGTTGTGTT+TGG | 0.433429 | 5.4:-23475270 | MS.gene44316:CDS |
| ATCTGTAACGGCAGACTACT+TGG | 0.440551 | 5.4:+23476645 | None:intergenic |
| TCTCATGTTGCAAGTGATAG+AGG | 0.444489 | 5.4:-23475365 | MS.gene44316:CDS |
| GTTAAATCATGGAGCAGGAT+TGG | 0.461494 | 5.4:-23475417 | MS.gene44316:CDS |
| GAGAATAAGATGATAGTGTT+TGG | 0.481251 | 5.4:-23476903 | MS.gene44316:CDS |
| AGAGCAGAGTTGTTAAATCA+TGG | 0.490916 | 5.4:-23475428 | MS.gene44316:CDS |
| TTTGGTGGTGAATCTGGAAA+TGG | 0.492857 | 5.4:-23476885 | MS.gene44316:CDS |
| CATGAAATGTTGCGTGTTGG+AGG | 0.510565 | 5.4:-23475290 | MS.gene44316:CDS |
| GAGTTGTTAAATCATGGAGC+AGG | 0.539941 | 5.4:-23475422 | MS.gene44316:CDS |
| GTTACAGATTCCAGTTTGCA+AGG | 0.549468 | 5.4:-23476631 | MS.gene44316:CDS |
| TGGATTGCTAGATGAGATGC+AGG | 0.556131 | 5.4:-23476865 | MS.gene44316:intron |
| CAAGACAAAAGAGAGGGCTA+AGG | 0.587076 | 5.4:-23475225 | MS.gene44316:CDS |
| TTACAGATTCCAGTTTGCAA+GGG | 0.593058 | 5.4:-23476630 | MS.gene44316:intron |
| TTACATGAAATGTTGCGTGT+TGG | 0.602505 | 5.4:-23475293 | MS.gene44316:CDS |
| CATCTTATTCTCAATGACAC+AGG | 0.607094 | 5.4:+23476914 | None:intergenic |
| TTGCAAACTGGAATCTGTAA+CGG | 0.615964 | 5.4:+23476633 | None:intergenic |
| AATAAGATGATAGTGTTTGG+TGG | 0.637222 | 5.4:-23476900 | MS.gene44316:CDS |
| GTAATTTCAAGACAAAAGAG+AGG | 0.637702 | 5.4:-23475232 | MS.gene44316:CDS |
| TAATTTCAAGACAAAAGAGA+GGG | 0.648697 | 5.4:-23475231 | MS.gene44316:CDS |
| GTATAGCTTAGATGACACAG+CGG | 0.844638 | 5.4:+23476674 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTAATTATAATGCAAA+TGG | - | chr5.4:23475987-23476006 | MS.gene44316:intron | 10.0% |
| !! | TAATTAATTATAATGCAAAT+GGG | - | chr5.4:23475988-23476007 | MS.gene44316:intron | 10.0% |
| !!! | ATTAATATTGACTAATTATT+TGG | - | chr5.4:23475519-23475538 | MS.gene44316:intron | 10.0% |
| !! | AAAAAAAAATCCTTTAATCT+GGG | + | chr5.4:23476166-23476185 | None:intergenic | 15.0% |
| !!! | AAAATACGTTATTTTTAAGA+AGG | + | chr5.4:23476134-23476153 | None:intergenic | 15.0% |
| !!! | TAAATTTTGACAAATTTTCA+TGG | - | chr5.4:23475592-23475611 | MS.gene44316:intron | 15.0% |
| !! | GAAAAAAAAATCCTTTAATC+TGG | + | chr5.4:23476167-23476186 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAT+AGG | - | chr5.4:23475260-23475279 | MS.gene44316:CDS | 20.0% |
| !!! | CAACATACTATTCATTTTAT+TGG | - | chr5.4:23475562-23475581 | MS.gene44316:intron | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+GGG | - | chr5.4:23475261-23475280 | MS.gene44316:CDS | 20.0% |
| !!! | TTCGTTTATTCTTTTTTACT+GGG | - | chr5.4:23476639-23476658 | MS.gene44316:CDS | 20.0% |
| !!! | TTTCGTTTATTCTTTTTTAC+TGG | - | chr5.4:23476638-23476657 | MS.gene44316:CDS | 20.0% |
| ! | AAAATAAGAAAATAGTGACC+AGG | - | chr5.4:23476395-23476414 | MS.gene44316:intron | 25.0% |
| ! | AAACTATCATTCATCAAGTT+AGG | + | chr5.4:23476614-23476633 | None:intergenic | 25.0% |
| ! | AAATGAATAGTATGTTGATG+TGG | + | chr5.4:23475559-23475578 | None:intergenic | 25.0% |
| ! | AACTGACAATAAGTTTAACA+AGG | - | chr5.4:23475904-23475923 | MS.gene44316:intron | 25.0% |
| ! | ACTCAAACATGTAAATGATA+TGG | - | chr5.4:23477092-23477111 | MS.gene44316:intron | 25.0% |
| ! | ACTTAAGTCCATTCAAAAAT+TGG | + | chr5.4:23476530-23476549 | None:intergenic | 25.0% |
| ! | ATGTAAAAGCTAAAGTCATT+AGG | - | chr5.4:23475195-23475214 | MS.gene44316:CDS | 25.0% |
| ! | ATTCAAATTCTCAAAACTTC+AGG | + | chr5.4:23476323-23476342 | None:intergenic | 25.0% |
| ! | ATTCATCAAGTTAGGATTAT+TGG | + | chr5.4:23476606-23476625 | None:intergenic | 25.0% |
| ! | GAATTATGAGTTCTATTTGT+AGG | - | chr5.4:23476953-23476972 | MS.gene44316:intron | 25.0% |
| ! | GATCAATGCAGATTATAATA+TGG | + | chr5.4:23476101-23476120 | None:intergenic | 25.0% |
| ! | TAATTTCAAGACAAAAGAGA+GGG | - | chr5.4:23477059-23477078 | MS.gene44316:intron | 25.0% |
| ! | TGGATAAACAACTTAATGAA+AGG | + | chr5.4:23475257-23475276 | None:intergenic | 25.0% |
| ! | TTGACTAATTATTTGGTTGT+TGG | - | chr5.4:23475526-23475545 | MS.gene44316:intron | 25.0% |
| !! | ATACTATTCATTTTATTGGC+AGG | - | chr5.4:23475566-23475585 | MS.gene44316:intron | 25.0% |
| !! | TGTGTCAAAGAAAATTTTGA+GGG | - | chr5.4:23476900-23476919 | MS.gene44316:CDS | 25.0% |
| !! | TTGTGTCAAAGAAAATTTTG+AGG | - | chr5.4:23476899-23476918 | MS.gene44316:CDS | 25.0% |
| !!! | TATTCTTTTTTACTGGGAAT+CGG | - | chr5.4:23476645-23476664 | MS.gene44316:CDS | 25.0% |
| AAGCTAAAGTCATTAGGTTA+TGG | - | chr5.4:23475201-23475220 | MS.gene44316:CDS | 30.0% | |
| ACTAATTATTTGGTTGTTGG+TGG | - | chr5.4:23475529-23475548 | MS.gene44316:intron | 30.0% | |
| AGTTGTGAATGAAATTCGAT+TGG | + | chr5.4:23475888-23475907 | None:intergenic | 30.0% | |
| ATGTCATTATTAAGGTCACT+TGG | + | chr5.4:23475757-23475776 | None:intergenic | 30.0% | |
| GTAATTTCAAGACAAAAGAG+AGG | - | chr5.4:23477058-23477077 | MS.gene44316:intron | 30.0% | |
| GTTTGTGAATTGATGTTGAT+AGG | - | chr5.4:23476808-23476827 | MS.gene44316:intron | 30.0% | |
| ! | AATAAGATGATAGTGTTTGG+TGG | - | chr5.4:23475390-23475409 | MS.gene44316:CDS | 30.0% |
| ! | AGAGCATCATGTCATTATTA+AGG | + | chr5.4:23475765-23475784 | None:intergenic | 30.0% |
| ! | CAAACTTCTTTTCGATGTTT+CGG | - | chr5.4:23476777-23476796 | MS.gene44316:intron | 30.0% |
| ! | GAGAATAAGATGATAGTGTT+TGG | - | chr5.4:23475387-23475406 | MS.gene44316:CDS | 30.0% |
| ! | TACATTTTCCTAGGAAAACT+AGG | - | chr5.4:23476424-23476443 | MS.gene44316:intron | 30.0% |
| ! | TGAATTGATGTTGATAGGTT+TGG | - | chr5.4:23476813-23476832 | MS.gene44316:intron | 30.0% |
| !! | TATTGTTAAGTACTGACTAC+TGG | - | chr5.4:23475326-23475345 | MS.gene44316:CDS | 30.0% |
| AATCCACCCTTAGTAAATTG+AGG | - | chr5.4:23475832-23475851 | MS.gene44316:intron | 35.0% | |
| AATTATAATGCAAATGGGCG+TGG | - | chr5.4:23475993-23476012 | MS.gene44316:intron | 35.0% | |
| ACTTGATTCATGTAGATGGT+TGG | - | chr5.4:23476240-23476259 | MS.gene44316:intron | 35.0% | |
| AGAGCAGAGTTGTTAAATCA+TGG | - | chr5.4:23476862-23476881 | MS.gene44316:intron | 35.0% | |
| AGGAGTTTCAAAGTTGTGTT+TGG | - | chr5.4:23477020-23477039 | MS.gene44316:intron | 35.0% | |
| AGTCCATTCAAAAATTGGTC+AGG | + | chr5.4:23476525-23476544 | None:intergenic | 35.0% | |
| ATAGGTTTGGATCAACTTTG+TGG | - | chr5.4:23476826-23476845 | MS.gene44316:intron | 35.0% | |
| ATGGATGAAGTTACATACCA+TGG | + | chr5.4:23476082-23476101 | None:intergenic | 35.0% | |
| CATCACTTGATTCATGTAGA+TGG | - | chr5.4:23476236-23476255 | MS.gene44316:intron | 35.0% | |
| CATCTTATTCTCAATGACAC+AGG | + | chr5.4:23475379-23475398 | None:intergenic | 35.0% | |
| CTTGCTTTCATTCTTGGAAT+AGG | - | chr5.4:23476030-23476049 | MS.gene44316:intron | 35.0% | |
| GGACTAACATAAGGATACAT+TGG | + | chr5.4:23476753-23476772 | None:intergenic | 35.0% | |
| GTCCATTCAAAAATTGGTCA+GGG | + | chr5.4:23476524-23476543 | None:intergenic | 35.0% | |
| GTTTGCTTAGGACTAACATA+AGG | + | chr5.4:23476762-23476781 | None:intergenic | 35.0% | |
| TAGCAGCCTCAATTTACTAA+GGG | + | chr5.4:23475841-23475860 | None:intergenic | 35.0% | |
| TAGGAAAATGTACAAAGACC+TGG | + | chr5.4:23476416-23476435 | None:intergenic | 35.0% | |
| TCCATTCAAAAATTGGTCAG+GGG | + | chr5.4:23476523-23476542 | None:intergenic | 35.0% | |
| TCCTAGGAAAACTAGGTAAA+AGG | - | chr5.4:23476431-23476450 | MS.gene44316:intron | 35.0% | |
| TCTTGAATGACATGCAGAAT+TGG | - | chr5.4:23476461-23476480 | MS.gene44316:intron | 35.0% | |
| TTACAGATTCCAGTTTGCAA+GGG | - | chr5.4:23475660-23475679 | MS.gene44316:intron | 35.0% | |
| TTACATGAAATGTTGCGTGT+TGG | - | chr5.4:23476997-23477016 | MS.gene44316:intron | 35.0% | |
| TTCGAAAAGCAATTAGTGAG+CGG | + | chr5.4:23475940-23475959 | None:intergenic | 35.0% | |
| TTGCAAACTGGAATCTGTAA+CGG | + | chr5.4:23475660-23475679 | None:intergenic | 35.0% | |
| TTTCGATGTTTCGGAAAGAA+GGG | - | chr5.4:23476786-23476805 | MS.gene44316:intron | 35.0% | |
| ! | ACTACTGGTCTGTTATTCAT+TGG | - | chr5.4:23475341-23475360 | MS.gene44316:CDS | 35.0% |
| ! | AGGTCTTTGTACATTTTCCT+AGG | - | chr5.4:23476415-23476434 | MS.gene44316:intron | 35.0% |
| ! | CATCGAAAAGAAGTTTGCTT+AGG | + | chr5.4:23476774-23476793 | None:intergenic | 35.0% |
| ! | CTTGGAATAGGATTGCATTT+TGG | - | chr5.4:23476042-23476061 | MS.gene44316:intron | 35.0% |
| ! | TTTTCGATGTTTCGGAAAGA+AGG | - | chr5.4:23476785-23476804 | MS.gene44316:intron | 35.0% |
| !! | ACCTTTTACCTAGTTTTCCT+AGG | + | chr5.4:23476435-23476454 | None:intergenic | 35.0% |
| !! | CTTAAGTTGAAGTTCATTGC+AGG | - | chr5.4:23476543-23476562 | MS.gene44316:intron | 35.0% |
| !!! | AACATTTCTGGTTTTGGACT+TGG | - | chr5.4:23475458-23475477 | MS.gene44316:intron | 35.0% |
| AAACTATGACCCTTGCAAAC+TGG | + | chr5.4:23475672-23475691 | None:intergenic | 40.0% | |
| AACTTTGTGGTTGTGCAGAA+GGG | - | chr5.4:23476839-23476858 | MS.gene44316:intron | 40.0% | |
| AGTTTGCAAGGGTCATAGTT+TGG | - | chr5.4:23475671-23475690 | MS.gene44316:intron | 40.0% | |
| CATATGACGAAGACCCTATT+TGG | + | chr5.4:23475277-23475296 | None:intergenic | 40.0% | |
| GAAGTTACATACCATGGAGA+AGG | + | chr5.4:23476076-23476095 | None:intergenic | 40.0% | |
| GAGTTGTTAAATCATGGAGC+AGG | - | chr5.4:23476868-23476887 | MS.gene44316:CDS | 40.0% | |
| GTAGCAGCCTCAATTTACTA+AGG | + | chr5.4:23475842-23475861 | None:intergenic | 40.0% | |
| GTATAGCTTAGATGACACAG+CGG | + | chr5.4:23475619-23475638 | None:intergenic | 40.0% | |
| GTTAAATCATGGAGCAGGAT+TGG | - | chr5.4:23476873-23476892 | MS.gene44316:CDS | 40.0% | |
| GTTACAGATTCCAGTTTGCA+AGG | - | chr5.4:23475659-23475678 | MS.gene44316:intron | 40.0% | |
| TCTCATGTTGCAAGTGATAG+AGG | - | chr5.4:23476925-23476944 | MS.gene44316:intron | 40.0% | |
| TGATGCTCTCATCATAGACA+TGG | - | chr5.4:23475776-23475795 | MS.gene44316:intron | 40.0% | |
| TGGATATTCATCCTTCTCCA+TGG | - | chr5.4:23476062-23476081 | MS.gene44316:intron | 40.0% | |
| TGTTCAGATGCCCAGATTAA+AGG | - | chr5.4:23476153-23476172 | MS.gene44316:intron | 40.0% | |
| TTGGCACTTGCTTTCATTCT+TGG | - | chr5.4:23476024-23476043 | MS.gene44316:intron | 40.0% | |
| ! | ACCCCTGACCAATTTTTGAA+TGG | - | chr5.4:23476519-23476538 | MS.gene44316:intron | 40.0% |
| !! | ATAGTGTTTGGTGGTGAATC+TGG | - | chr5.4:23475399-23475418 | MS.gene44316:CDS | 40.0% |
| !! | TTTGGTGGTGAATCTGGAAA+TGG | - | chr5.4:23475405-23475424 | MS.gene44316:CDS | 40.0% |
| !!! | TGAGGGAACATTTCTGGTTT+TGG | - | chr5.4:23475452-23475471 | MS.gene44316:intron | 40.0% |
| ATCTGTAACGGCAGACTACT+TGG | + | chr5.4:23475648-23475667 | None:intergenic | 45.0% | |
| CAACTTTGTGGTTGTGCAGA+AGG | - | chr5.4:23476838-23476857 | MS.gene44316:intron | 45.0% | |
| CAAGACAAAAGAGAGGGCTA+AGG | - | chr5.4:23477065-23477084 | MS.gene44316:intron | 45.0% | |
| CAGCCTCAATTTACTAAGGG+TGG | + | chr5.4:23475838-23475857 | None:intergenic | 45.0% | |
| CATGAAATGTTGCGTGTTGG+AGG | - | chr5.4:23477000-23477019 | MS.gene44316:intron | 45.0% | |
| GGACTGTCACAGACTTTCAT+AGG | - | chr5.4:23475222-23475241 | MS.gene44316:CDS | 45.0% | |
| TGGATTGCTAGATGAGATGC+AGG | - | chr5.4:23475425-23475444 | MS.gene44316:CDS | 45.0% | |
| AATGGGCGTGGTTCTTGGAT+TGG | - | chr5.4:23476005-23476024 | MS.gene44316:intron | 50.0% | |
| AGATGAGATGCAGGTGAGTG+AGG | - | chr5.4:23475434-23475453 | MS.gene44316:CDS | 50.0% | |
| ATGCAAATGGGCGTGGTTCT+TGG | - | chr5.4:23476000-23476019 | MS.gene44316:intron | 50.0% | |
| GATGAGATGCAGGTGAGTGA+GGG | - | chr5.4:23475435-23475454 | MS.gene44316:CDS | 50.0% | |
| GGTGAGTGAGGGAACATTTC+TGG | - | chr5.4:23475446-23475465 | MS.gene44316:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 23475190 | 23477122 | 23475190 | ID=MS.gene44316 |
| chr5.4 | mRNA | 23475190 | 23477122 | 23475190 | ID=MS.gene44316.t1;Parent=MS.gene44316 |
| chr5.4 | exon | 23477116 | 23477122 | 23477116 | ID=MS.gene44316.t1.exon1;Parent=MS.gene44316.t1 |
| chr5.4 | CDS | 23477116 | 23477122 | 23477116 | ID=cds.MS.gene44316.t1;Parent=MS.gene44316.t1 |
| chr5.4 | exon | 23476866 | 23476936 | 23476866 | ID=MS.gene44316.t1.exon2;Parent=MS.gene44316.t1 |
| chr5.4 | CDS | 23476866 | 23476936 | 23476866 | ID=cds.MS.gene44316.t1;Parent=MS.gene44316.t1 |
| chr5.4 | exon | 23476631 | 23476724 | 23476631 | ID=MS.gene44316.t1.exon3;Parent=MS.gene44316.t1 |
| chr5.4 | CDS | 23476631 | 23476724 | 23476631 | ID=cds.MS.gene44316.t1;Parent=MS.gene44316.t1 |
| chr5.4 | exon | 23475190 | 23475455 | 23475190 | ID=MS.gene44316.t1.exon4;Parent=MS.gene44316.t1 |
| chr5.4 | CDS | 23475190 | 23475455 | 23475190 | ID=cds.MS.gene44316.t1;Parent=MS.gene44316.t1 |
| Gene Sequence |
| Protein sequence |
