Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053966.t1 | XP_024639431.1 | 56.3 | 71 | 21 | 1 | 18 | 78 | 133 | 203 | 8.80E-09 | 69.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053966.t1 | A0A396HXP9 | 56.3 | 71 | 21 | 1 | 18 | 78 | 133 | 203 | 6.4e-09 | 69.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050156 | MS.gene053966 | 0.819325 | 1.23E-52 | -1.69E-46 |
| MS.gene050355 | MS.gene053966 | 0.805789 | 1.13E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene053966 | 0.801077 | 1.07E-48 | -1.69E-46 |
| MS.gene050844 | MS.gene053966 | 0.804912 | 1.72E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene053966 | 0.816405 | 5.63E-52 | -1.69E-46 |
| MS.gene052190 | MS.gene053966 | 0.814638 | 1.39E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene053966 | 0.814516 | 1.48E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene053966 | 0.813297 | 2.75E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene053966 | 0.806105 | 9.67E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene053966 | 0.81491 | 1.21E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene053967 | 0.873731 | 1.17E-67 | -1.69E-46 |
| MS.gene053966 | MS.gene053974 | 0.808213 | 3.46E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene053998 | 0.814213 | 1.73E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene054236 | 0.806376 | 8.48E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene054467 | 0.810015 | 1.42E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene054468 | 0.808462 | 3.06E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene054651 | 0.816788 | 4.62E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene054775 | 0.808692 | 2.73E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene055586 | 0.813012 | 3.17E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene055778 | 0.81917 | 1.34E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene055818 | 0.81571 | 8.04E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene056050 | 0.803596 | 3.23E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene056162 | 0.813059 | 3.10E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene056173 | 0.818121 | 2.31E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene057026 | 0.830906 | 2.26E-55 | -1.69E-46 |
| MS.gene053966 | MS.gene058625 | 0.816541 | 5.24E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene058829 | 0.835381 | 1.73E-56 | -1.69E-46 |
| MS.gene053966 | MS.gene058979 | 0.812743 | 3.64E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene060553 | 0.803136 | 4.03E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene06269 | 0.82358 | 1.28E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene064321 | 0.806853 | 6.72E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene065039 | 0.809621 | 1.73E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene065904 | 0.806678 | 7.32E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene066264 | 0.814336 | 1.62E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene066267 | 0.800313 | 1.53E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene066335 | 0.807171 | 5.76E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene066433 | 0.805 | 1.65E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene066436 | 0.803438 | 3.49E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene066782 | 0.812104 | 5.02E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene066784 | 0.808978 | 2.37E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene067208 | 0.820441 | 6.85E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene06723 | 0.803067 | 4.16E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene067273 | 0.814801 | 1.28E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene067932 | 0.807513 | 4.87E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene068385 | 0.809543 | 1.80E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene068456 | 0.807196 | 5.69E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene068503 | 0.800307 | 1.53E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene068526 | 0.8065 | 7.98E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene06921 | 0.803188 | 3.93E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene06922 | 0.808113 | 3.63E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene069956 | 0.823509 | 1.33E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene070301 | 0.817641 | 2.97E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene070818 | 0.801059 | 1.08E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene071442 | 0.810098 | 1.36E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene071444 | 0.806123 | 9.59E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene071457 | 0.805574 | 1.25E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene071551 | 0.806888 | 6.61E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene072098 | 0.827613 | 1.42E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene072397 | -0.816385 | 5.68E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene07294 | 0.812993 | 3.21E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene073008 | 0.821705 | 3.50E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene073139 | 0.831534 | 1.58E-55 | -1.69E-46 |
| MS.gene053966 | MS.gene07344 | 0.801925 | 7.15E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene073753 | 0.816253 | 6.08E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene073853 | 0.809218 | 2.11E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene07394 | 0.815181 | 1.05E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene07733 | 0.815038 | 1.13E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene07876 | 0.807522 | 4.85E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene08589 | 0.810397 | 1.18E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene08853 | 0.827986 | 1.16E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene08854 | 0.817717 | 2.85E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene09008 | 0.820471 | 6.74E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene09740 | 0.815093 | 1.10E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene20809 | 0.823895 | 1.08E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene21927 | 0.81325 | 2.81E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene21929 | 0.820203 | 7.77E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene22271 | 0.80972 | 1.65E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene22609 | 0.81411 | 1.82E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene22964 | 0.803837 | 2.88E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene23190 | 0.828128 | 1.07E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene23422 | 0.800989 | 1.11E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene23893 | 0.800494 | 1.40E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene24067 | 0.827093 | 1.89E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene24493 | 0.808574 | 2.90E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene25778 | 0.802505 | 5.44E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene26899 | 0.802793 | 4.74E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene27903 | 0.802595 | 5.21E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene28514 | 0.815173 | 1.06E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene29022 | 0.816399 | 5.64E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene29489 | 0.808884 | 2.49E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene30739 | 0.806452 | 8.17E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene30970 | 0.806802 | 6.89E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene31142 | 0.81528 | 1.00E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene31231 | 0.802765 | 4.80E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene31283 | 0.865547 | 5.46E-65 | -1.69E-46 |
| MS.gene053966 | MS.gene32231 | 0.816531 | 5.27E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene32874 | 0.800809 | 1.21E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene33468 | 0.827192 | 1.79E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene33624 | 0.827225 | 1.76E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene34667 | 0.808173 | 3.53E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene35314 | 0.82993 | 3.91E-55 | -1.69E-46 |
| MS.gene053966 | MS.gene35408 | 0.808793 | 2.60E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene37612 | 0.807282 | 5.45E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene38381 | 0.803239 | 3.83E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene38976 | 0.802932 | 4.44E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene40068 | 0.80527 | 1.45E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene43886 | 0.814925 | 1.20E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene43906 | 0.811937 | 5.45E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene43973 | 0.806876 | 6.65E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene44316 | 0.823663 | 1.23E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene44356 | 0.804423 | 2.18E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene44510 | 0.801937 | 7.11E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene44986 | 0.824173 | 9.32E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene45194 | 0.820501 | 6.63E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene45507 | 0.813265 | 2.79E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene45918 | 0.816688 | 4.86E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene47210 | 0.822646 | 2.12E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene47832 | 0.821911 | 3.14E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene47834 | 0.813833 | 2.10E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene47858 | 0.819612 | 1.06E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene47903 | 0.811703 | 6.13E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene49003 | 0.802939 | 4.42E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene49281 | 0.822342 | 2.49E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene49283 | 0.815423 | 9.32E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene49633 | 0.801103 | 1.05E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene49665 | 0.801879 | 7.31E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene50031 | 0.828674 | 7.88E-55 | -1.69E-46 |
| MS.gene053966 | MS.gene50869 | 0.805575 | 1.25E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene51459 | 0.819567 | 1.09E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene51511 | 0.822769 | 1.98E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene51818 | 0.826886 | 2.12E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene51836 | 0.805825 | 1.11E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene52130 | 0.802737 | 4.87E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene52525 | 0.80755 | 4.79E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene53064 | 0.815122 | 1.09E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene53321 | 0.810429 | 1.16E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene53467 | 0.821039 | 4.99E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene53586 | 0.820125 | 8.09E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene54110 | 0.801931 | 7.13E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene54507 | 0.804502 | 2.09E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene54538 | 0.818921 | 1.52E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene54544 | 0.80412 | 2.52E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene54686 | 0.805615 | 1.23E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene55111 | 0.821842 | 3.26E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene55406 | 0.807655 | 4.55E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene56304 | 0.805546 | 1.27E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene56537 | 0.80544 | 1.33E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene56562 | 0.820078 | 8.29E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene57027 | 0.822288 | 2.57E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene58547 | 0.833063 | 6.61E-56 | -1.69E-46 |
| MS.gene053966 | MS.gene58638 | 0.814508 | 1.49E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene58686 | 0.846639 | 1.91E-59 | -1.69E-46 |
| MS.gene053966 | MS.gene58802 | 0.832146 | 1.12E-55 | -1.69E-46 |
| MS.gene053966 | MS.gene59840 | 0.816008 | 6.90E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene60566 | 0.800043 | 1.73E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene60827 | 0.801573 | 8.45E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene62214 | 0.802644 | 5.09E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene64249 | 0.828831 | 7.22E-55 | -1.69E-46 |
| MS.gene053966 | MS.gene64567 | 0.800001 | 1.77E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene65271 | 0.804364 | 2.24E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene67152 | 0.800765 | 1.24E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene67738 | 0.819551 | 1.09E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene67746 | 0.834737 | 2.52E-56 | -1.69E-46 |
| MS.gene053966 | MS.gene68333 | 0.803547 | 3.31E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene68824 | 0.832688 | 8.20E-56 | -1.69E-46 |
| MS.gene053966 | MS.gene68826 | 0.846517 | 2.07E-59 | -1.69E-46 |
| MS.gene053966 | MS.gene70313 | 0.808523 | 2.97E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene72268 | 0.828872 | 7.06E-55 | -1.69E-46 |
| MS.gene053966 | MS.gene73564 | 0.807344 | 5.29E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene74257 | 0.811922 | 5.50E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene74367 | 0.825958 | 3.53E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene74370 | 0.813848 | 2.08E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene74373 | 0.808173 | 3.53E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene75184 | 0.806631 | 7.49E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene75963 | 0.81196 | 5.39E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene76148 | 0.813914 | 2.01E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene76158 | 0.805736 | 1.16E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene77173 | 0.806321 | 8.71E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene77220 | 0.811541 | 6.65E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene77781 | 0.813999 | 1.93E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene77785 | 0.807846 | 4.14E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene78775 | 0.86036 | 2.18E-63 | -1.69E-46 |
| MS.gene053966 | MS.gene79285 | 0.827365 | 1.63E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene79960 | 0.801597 | 8.35E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene80853 | 0.815366 | 9.59E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene81370 | 0.801601 | 8.34E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene82699 | 0.801703 | 7.95E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene83055 | 0.810579 | 1.07E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene84454 | 0.812054 | 5.14E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene84705 | 0.806063 | 9.87E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene84803 | 0.820103 | 8.19E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene86086 | 0.825187 | 5.38E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene86844 | 0.804719 | 1.89E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene87377 | 0.810712 | 1.01E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene88171 | 0.805337 | 1.40E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene89419 | 0.824928 | 6.19E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene89726 | 0.800381 | 1.48E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene90605 | 0.813109 | 3.02E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene90823 | 0.817485 | 3.22E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene91259 | 0.804795 | 1.82E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene91337 | 0.812973 | 3.24E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene92383 | 0.84726 | 1.29E-59 | -1.69E-46 |
| MS.gene053966 | MS.gene92579 | 0.800899 | 1.16E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene92642 | 0.802926 | 4.45E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene93041 | 0.802732 | 4.88E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene93311 | 0.823698 | 1.20E-53 | -1.69E-46 |
| MS.gene053966 | MS.gene93764 | 0.814206 | 1.73E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene94474 | 0.807823 | 4.19E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene94608 | 0.825495 | 4.54E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene95619 | 0.8006 | 1.34E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene96073 | 0.800181 | 1.63E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene97344 | 0.824204 | 9.16E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene98087 | 0.80328 | 3.76E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene98088 | 0.812181 | 4.82E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene98611 | 0.8114 | 7.13E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene98828 | 0.808177 | 3.52E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene98848 | 0.800161 | 1.64E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene99849 | 0.825394 | 4.80E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 13 sgRNAs with CRISPR-Local
Find 12 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTTCTACATATGGATTCT+TGG | 0.262711 | 5.2:-42965401 | MS.gene053966:CDS |
| AAAAGGACAAAGAGCATCTA+AGG | 0.339255 | 5.2:-42965507 | MS.gene053966:CDS |
| TGAATTGATGTCTCTAGAAA+AGG | 0.480662 | 5.2:-42965524 | MS.gene053966:CDS |
| AAAGACGAGTCTTCTACATA+TGG | 0.492701 | 5.2:-42965409 | MS.gene053966:CDS |
| AGCTGCTGTCAATGTGGAGC+GGG | 0.505097 | 5.2:-42965348 | None:intergenic |
| TAAGCTCGAAAGAGCTGAAG+AGG | 0.554165 | 5.2:-42965482 | MS.gene053966:CDS |
| TGACCTCCTTGACTCTCTTG+TGG | 0.562654 | 5.2:-42965446 | MS.gene053966:CDS |
| GCTCGAAAGAGCTGAAGAGG+AGG | 0.578578 | 5.2:-42965479 | MS.gene053966:CDS |
| AAAGAGCTGAAGAGGAGGTG+AGG | 0.606699 | 5.2:-42965474 | MS.gene053966:CDS |
| GTAGCTTAAAACAATCAACT+CGG | 0.647486 | 5.2:-42965567 | None:intergenic |
| AAGCTGCTGTCAATGTGGAG+CGG | 0.655453 | 5.2:-42965349 | MS.gene053966:CDS |
| CTGCTGCCACAAGAGAGTCA+AGG | 0.705247 | 5.2:+42965440 | None:intergenic |
| CTGCCACAAGAGAGTCAAGG+AGG | 0.721597 | 5.2:+42965443 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TGAATTGATGTCTCTAGAAA+AGG | - | chr5.2:42965388-42965407 | MS.gene053966:CDS | 30.0% |
| AAAGACGAGTCTTCTACATA+TGG | - | chr5.2:42965503-42965522 | MS.gene053966:CDS | 35.0% | |
| GTCTTCTACATATGGATTCT+TGG | - | chr5.2:42965511-42965530 | MS.gene053966:CDS | 35.0% | |
| !! | AAAAGGACAAAGAGCATCTA+AGG | - | chr5.2:42965405-42965424 | MS.gene053966:CDS | 35.0% |
| GTAAAAAGCTGCTGTCAATG+TGG | - | chr5.2:42965558-42965577 | MS.gene053966:CDS | 40.0% | |
| TAAGCTCGAAAGAGCTGAAG+AGG | - | chr5.2:42965430-42965449 | MS.gene053966:CDS | 45.0% | |
| AAAGAGCTGAAGAGGAGGTG+AGG | - | chr5.2:42965438-42965457 | MS.gene053966:CDS | 50.0% | |
| AAGCTGCTGTCAATGTGGAG+CGG | - | chr5.2:42965563-42965582 | MS.gene053966:CDS | 50.0% | |
| TGACCTCCTTGACTCTCTTG+TGG | - | chr5.2:42965466-42965485 | MS.gene053966:CDS | 50.0% | |
| CTGCCACAAGAGAGTCAAGG+AGG | + | chr5.2:42965472-42965491 | None:intergenic | 55.0% | |
| CTGCTGCCACAAGAGAGTCA+AGG | + | chr5.2:42965475-42965494 | None:intergenic | 55.0% | |
| GCTCGAAAGAGCTGAAGAGG+AGG | - | chr5.2:42965433-42965452 | MS.gene053966:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 42965349 | 42965585 | 42965349 | ID=MS.gene053966 |
| chr5.2 | mRNA | 42965349 | 42965585 | 42965349 | ID=MS.gene053966.t1;Parent=MS.gene053966 |
| chr5.2 | exon | 42965349 | 42965585 | 42965349 | ID=MS.gene053966.t1.exon1;Parent=MS.gene053966.t1 |
| chr5.2 | CDS | 42965349 | 42965585 | 42965349 | ID=cds.MS.gene053966.t1;Parent=MS.gene053966.t1 |
| Gene Sequence |
| Protein sequence |
