Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45142.t1 | XP_003613387.1 | 92.6 | 394 | 24 | 2 | 61 | 454 | 60 | 448 | 3.00E-173 | 618.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45142.t1 | O48716 | 28.7 | 369 | 197 | 6 | 111 | 449 | 86 | 418 | 1.2e-34 | 149.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45142.t1 | G7K5I2 | 92.6 | 394 | 24 | 2 | 61 | 454 | 60 | 448 | 2.1e-173 | 618.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049052 | MS.gene45142 | PPI |
| MS.gene45142 | MS.gene047966 | PPI |
| MS.gene45142 | MS.gene002926 | PPI |
| MS.gene45142 | MS.gene057771 | PPI |
| MS.gene45142 | MS.gene062996 | PPI |
| MS.gene45142 | MS.gene66388 | PPI |
| MS.gene71143 | MS.gene45142 | PPI |
| MS.gene45142 | MS.gene015841 | PPI |
| MS.gene45142 | MS.gene037505 | PPI |
| MS.gene45142 | MS.gene037500 | PPI |
| MS.gene45142 | MS.gene063343 | PPI |
| MS.gene057845 | MS.gene45142 | PPI |
| MS.gene45142 | MS.gene78433 | PPI |
| MS.gene45142 | MS.gene049051 | PPI |
| MS.gene34575 | MS.gene45142 | PPI |
| MS.gene45142 | MS.gene34510 | PPI |
| MS.gene51070 | MS.gene45142 | PPI |
| MS.gene45142 | MS.gene030337 | PPI |
| MS.gene45142 | MS.gene75024 | PPI |
| MS.gene45142 | MS.gene025453 | PPI |
| MS.gene45142 | MS.gene77337 | PPI |
| MS.gene45142 | MS.gene00843 | PPI |
| MS.gene01884 | MS.gene45142 | PPI |
| MS.gene20137 | MS.gene45142 | PPI |
| MS.gene84203 | MS.gene45142 | PPI |
| MS.gene45142 | MS.gene003568 | PPI |
| MS.gene45142 | MS.gene05967 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45142.t1 | MTR_5g035980 | 95.595 | 454 | 14 | 3 | 1 | 454 | 1 | 448 | 0.0 | 878 |
| MS.gene45142.t1 | MTR_3g078380 | 52.315 | 432 | 150 | 14 | 37 | 454 | 25 | 414 | 7.08e-136 | 397 |
| MS.gene45142.t1 | MTR_4g106480 | 50.824 | 425 | 162 | 10 | 35 | 454 | 19 | 401 | 4.15e-133 | 390 |
| MS.gene45142.t1 | MTR_8g089650 | 47.017 | 419 | 158 | 13 | 45 | 451 | 64 | 430 | 2.36e-110 | 333 |
| MS.gene45142.t1 | MTR_4g104410 | 42.184 | 403 | 170 | 15 | 55 | 449 | 16 | 363 | 6.33e-82 | 257 |
| MS.gene45142.t1 | MTR_5g018520 | 34.624 | 439 | 227 | 9 | 13 | 450 | 41 | 420 | 4.53e-79 | 253 |
| MS.gene45142.t1 | MTR_1g021590 | 35.821 | 402 | 203 | 8 | 48 | 449 | 85 | 431 | 1.26e-77 | 249 |
| MS.gene45142.t1 | MTR_4g068457 | 35.731 | 431 | 208 | 12 | 36 | 449 | 78 | 456 | 1.57e-71 | 234 |
| MS.gene45142.t1 | MTR_2g060070 | 34.518 | 394 | 194 | 14 | 58 | 449 | 50 | 381 | 2.12e-65 | 216 |
| MS.gene45142.t1 | MTR_3g110185 | 32.373 | 451 | 229 | 12 | 18 | 451 | 20 | 411 | 9.40e-51 | 184 |
| MS.gene45142.t1 | MTR_2g101410 | 31.514 | 403 | 203 | 15 | 58 | 451 | 71 | 409 | 3.38e-44 | 160 |
| MS.gene45142.t1 | MTR_2g086140 | 33.728 | 169 | 99 | 5 | 247 | 412 | 16 | 174 | 3.66e-14 | 75.5 |
| MS.gene45142.t1 | MTR_4g053675 | 30.994 | 171 | 105 | 5 | 247 | 412 | 16 | 178 | 8.91e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45142.t1 | AT1G24130 | 54.746 | 453 | 156 | 10 | 6 | 454 | 8 | 415 | 1.01e-140 | 409 |
| MS.gene45142.t1 | AT5G50120 | 45.652 | 414 | 185 | 9 | 43 | 452 | 10 | 387 | 2.12e-117 | 349 |
| MS.gene45142.t1 | AT1G24530 | 45.278 | 413 | 167 | 12 | 39 | 451 | 52 | 405 | 5.39e-103 | 313 |
| MS.gene45142.t1 | AT2G26490 | 36.883 | 385 | 185 | 9 | 70 | 454 | 97 | 423 | 8.01e-75 | 242 |
| MS.gene45142.t1 | AT3G50390 | 35.222 | 406 | 195 | 11 | 54 | 449 | 77 | 424 | 1.15e-71 | 234 |
| MS.gene45142.t1 | AT3G51930 | 34.783 | 414 | 222 | 11 | 38 | 449 | 27 | 394 | 9.21e-70 | 227 |
| MS.gene45142.t1 | AT3G18950 | 35.279 | 394 | 196 | 10 | 60 | 449 | 126 | 464 | 1.04e-68 | 226 |
| MS.gene45142.t1 | AT4G34380 | 34.615 | 390 | 201 | 9 | 64 | 449 | 117 | 456 | 3.41e-67 | 223 |
| MS.gene45142.t1 | AT1G49450 | 33.941 | 439 | 225 | 11 | 24 | 449 | 80 | 466 | 4.15e-67 | 222 |
| MS.gene45142.t1 | AT1G47610 | 33.760 | 391 | 200 | 13 | 64 | 452 | 16 | 349 | 3.12e-61 | 203 |
| MS.gene45142.t1 | AT1G21651 | 27.368 | 190 | 105 | 6 | 199 | 386 | 522 | 680 | 6.17e-12 | 68.6 |
| MS.gene45142.t1 | AT1G21650 | 27.368 | 190 | 105 | 6 | 199 | 386 | 522 | 680 | 6.29e-12 | 68.6 |
| MS.gene45142.t1 | AT3G44530 | 30.539 | 167 | 101 | 5 | 247 | 409 | 16 | 171 | 4.77e-11 | 65.9 |
| MS.gene45142.t1 | AT5G16750 | 25.681 | 257 | 145 | 12 | 167 | 408 | 361 | 586 | 5.06e-11 | 65.5 |
| MS.gene45142.t1 | AT3G44530 | 30.539 | 167 | 101 | 5 | 247 | 409 | 16 | 171 | 5.68e-11 | 65.5 |
Find 56 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATTGTTGTTTCATCTTC+TGG | 0.080562 | 5.1:+26675047 | MS.gene45142:CDS |
| GGGATAGAACATTCAAAATT+TGG | 0.193532 | 5.1:+26674964 | MS.gene45142:CDS |
| TAGCCTTAGTATGCCCTCTT+AGG | 0.234642 | 5.1:-26675370 | None:intergenic |
| CTGATTATAGTGTTAGATTA+TGG | 0.250597 | 5.1:+26675438 | MS.gene45142:CDS |
| AACAACAATCATTGACTTGA+TGG | 0.262801 | 5.1:-26674670 | None:intergenic |
| CACTCTAAATTTCTCTTTAG+TGG | 0.264901 | 5.1:+26674543 | MS.gene45142:CDS |
| CAATTGTTGTTTCATCTTCT+GGG | 0.279540 | 5.1:+26675048 | MS.gene45142:CDS |
| AAATCTTCTTATTTCACTAT+TGG | 0.283165 | 5.1:-26674571 | None:intergenic |
| CTGATAGAAAGATCAAAATT+TGG | 0.302795 | 5.1:+26675090 | MS.gene45142:CDS |
| TCTTCTGGGGTTGTTTATAC+AGG | 0.311488 | 5.1:+26675062 | MS.gene45142:CDS |
| TCTCTTGCTGTTTCGAAAGA+TGG | 0.341375 | 5.1:+26674918 | MS.gene45142:CDS |
| TACTAAGGCTATATTGTGTT+TGG | 0.351474 | 5.1:+26675382 | MS.gene45142:CDS |
| TGTAAAGCAAGGGATGAGAT+AGG | 0.355875 | 5.1:-26674522 | None:intergenic |
| AGCATTATTCGAAATTGTTC+CGG | 0.359690 | 5.1:+26675302 | MS.gene45142:CDS |
| CTCATCAAGATCACAAAATC+CGG | 0.361786 | 5.1:+26674712 | MS.gene45142:CDS |
| TTGATTGTGATATCAAAGTT+TGG | 0.373353 | 5.1:+26675621 | MS.gene45142:CDS |
| TTTGGTTGTGATGGATGATT+TGG | 0.391313 | 5.1:+26675400 | MS.gene45142:CDS |
| AAGATCACAAAATCCGGGTT+TGG | 0.420178 | 5.1:+26674718 | MS.gene45142:CDS |
| TAAAGCAAGGGATGAGATAG+GGG | 0.420234 | 5.1:-26674520 | None:intergenic |
| TTTGAAGCTTGAAGAGCAAA+AGG | 0.427788 | 5.1:-26674603 | None:intergenic |
| AGACCCAGACGACGAAAATA+TGG | 0.436892 | 5.1:+26675334 | MS.gene45142:CDS |
| AGATGGATTGTTTCTTTACT+CGG | 0.453556 | 5.1:+26674935 | MS.gene45142:CDS |
| AGTGTTAGATTATGGAAAAG+AGG | 0.466262 | 5.1:+26675446 | MS.gene45142:CDS |
| TATATTGTGTTTGGTTGTGA+TGG | 0.472582 | 5.1:+26675391 | MS.gene45142:CDS |
| ATTCTGAATGAATGTGATCA+TGG | 0.475540 | 5.1:-26674380 | None:intergenic |
| GTCTGGGTCTTGGTCTAGTC+CGG | 0.475863 | 5.1:-26675321 | None:intergenic |
| GTAAAGCAAGGGATGAGATA+GGG | 0.485394 | 5.1:-26674521 | None:intergenic |
| GTCCTAGTTGGTGCCCTAAG+AGG | 0.490038 | 5.1:+26675356 | MS.gene45142:CDS |
| TGTTTCTTTACTCGGCTTCG+TGG | 0.493077 | 5.1:+26674943 | MS.gene45142:CDS |
| GAAATTTAGAGTGTAAAGCA+AGG | 0.496059 | 5.1:-26674533 | None:intergenic |
| AAACTTCTAACAACAATCAA+TGG | 0.516871 | 5.1:+26674489 | MS.gene45142:CDS |
| GAAGGAACAGAAGGTAGACT+TGG | 0.519410 | 5.1:-26674432 | None:intergenic |
| AGCCTTAGTATGCCCTCTTA+GGG | 0.526558 | 5.1:-26675369 | None:intergenic |
| GTTTCTTTACTCGGCTTCGT+GGG | 0.536613 | 5.1:+26674944 | MS.gene45142:CDS |
| GCTTTAGCACTAAACAAAGA+TGG | 0.541869 | 5.1:+26675221 | MS.gene45142:CDS |
| GAAGTGAGAGAAGGAACAGA+AGG | 0.544583 | 5.1:-26674441 | None:intergenic |
| ATGGATGATTTGGTGTGTAG+TGG | 0.553153 | 5.1:+26675410 | MS.gene45142:CDS |
| TCCTAGTTGGTGCCCTAAGA+GGG | 0.557068 | 5.1:+26675357 | MS.gene45142:CDS |
| ATAGCAGATGATTCCAAAAG+TGG | 0.557521 | 5.1:+26675539 | MS.gene45142:CDS |
| TTGAAGCTTGAAGAGCAAAA+GGG | 0.560630 | 5.1:-26674602 | None:intergenic |
| AAATTTAGAGTGTAAAGCAA+GGG | 0.561546 | 5.1:-26674532 | None:intergenic |
| TGCCCTAAGAGGGCATACTA+AGG | 0.569818 | 5.1:+26675367 | MS.gene45142:CDS |
| GACGAAAATATGGTCCTAGT+TGG | 0.572008 | 5.1:+26675344 | MS.gene45142:CDS |
| TTCAAACAATATCAACAACT+TGG | 0.579730 | 5.1:+26674620 | MS.gene45142:CDS |
| GCCCTCTTAGGGCACCAACT+AGG | 0.579791 | 5.1:-26675358 | None:intergenic |
| AATTGTTGTTTCATCTTCTG+GGG | 0.581898 | 5.1:+26675049 | MS.gene45142:CDS |
| AACTTGGTAGCAATCAGTAA+TGG | 0.589681 | 5.1:+26674636 | MS.gene45142:CDS |
| AGTTCTTATCTTGTTTACAG+TGG | 0.604622 | 5.1:+26675593 | MS.gene45142:CDS |
| TCATCAAGATCACAAAATCC+GGG | 0.616047 | 5.1:+26674713 | MS.gene45142:CDS |
| GGTGGGGTTGATGATGATGA+TGG | 0.618938 | 5.1:+26675569 | MS.gene45142:CDS |
| TTCTGAATGAATGTGATCAT+GGG | 0.626189 | 5.1:-26674379 | None:intergenic |
| GATTGTTGTGAAGTGAGAGA+AGG | 0.627747 | 5.1:-26674450 | None:intergenic |
| GGAGACATAAGAAGTATACA+TGG | 0.631337 | 5.1:+26674871 | MS.gene45142:CDS |
| ATAGTACTAATCAAGATCAG+AGG | 0.646621 | 5.1:+26674766 | MS.gene45142:CDS |
| GAGACATAAGAAGTATACAT+GGG | 0.687899 | 5.1:+26674872 | MS.gene45142:CDS |
| ATGTGATCATGGGAAGAATG+AGG | 0.690153 | 5.1:-26674369 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAGAAAAAGCATTTTT+TGG | + | chr5.1:26675163-26675182 | MS.gene45142:CDS | 15.0% |
| !!! | AAATCTTCTTATTTCACTAT+TGG | - | chr5.1:26674574-26674593 | None:intergenic | 20.0% |
| !!! | TGATAGATCAATTTTAGTTT+GGG | + | chr5.1:26675268-26675287 | MS.gene45142:CDS | 20.0% |
| ! | AAACTTCTAACAACAATCAA+TGG | + | chr5.1:26674489-26674508 | MS.gene45142:CDS | 25.0% |
| ! | CTGATAGAAAGATCAAAATT+TGG | + | chr5.1:26675090-26675109 | MS.gene45142:CDS | 25.0% |
| ! | CTGATTATAGTGTTAGATTA+TGG | + | chr5.1:26675438-26675457 | MS.gene45142:CDS | 25.0% |
| ! | TAAAAAAGCTGTTAAGTGTT+TGG | + | chr5.1:26675514-26675533 | MS.gene45142:CDS | 25.0% |
| ! | TGAAAAAAGTTATGCATGTT+TGG | + | chr5.1:26675475-26675494 | MS.gene45142:CDS | 25.0% |
| ! | TTCAAACAATATCAACAACT+TGG | + | chr5.1:26674620-26674639 | MS.gene45142:CDS | 25.0% |
| ! | TTGATTGTGATATCAAAGTT+TGG | + | chr5.1:26675621-26675640 | MS.gene45142:CDS | 25.0% |
| !! | AAATTTAGAGTGTAAAGCAA+GGG | - | chr5.1:26674535-26674554 | None:intergenic | 25.0% |
| !! | TTTTTCATCGAAAAATTACG+TGG | + | chr5.1:26674842-26674861 | MS.gene45142:CDS | 25.0% |
| !!! | AAGAAAAAGCATTTTTTGGT+TGG | + | chr5.1:26675167-26675186 | MS.gene45142:CDS | 25.0% |
| !!! | CTGTTTTTTGTTTTTGTTGT+TGG | - | chr5.1:26674347-26674366 | None:intergenic | 25.0% |
| !!! | GTGATAGATCAATTTTAGTT+TGG | + | chr5.1:26675267-26675286 | MS.gene45142:CDS | 25.0% |
| AGCATTATTCGAAATTGTTC+CGG | + | chr5.1:26675302-26675321 | MS.gene45142:CDS | 30.0% | |
| AGTGTTAGATTATGGAAAAG+AGG | + | chr5.1:26675446-26675465 | MS.gene45142:CDS | 30.0% | |
| ATAGTACTAATCAAGATCAG+AGG | + | chr5.1:26674766-26674785 | MS.gene45142:CDS | 30.0% | |
| ATTCTGAATGAATGTGATCA+TGG | - | chr5.1:26674383-26674402 | None:intergenic | 30.0% | |
| CACTCTAAATTTCTCTTTAG+TGG | + | chr5.1:26674543-26674562 | MS.gene45142:CDS | 30.0% | |
| GAAAAACGATCATTGAATGT+TGG | - | chr5.1:26674816-26674835 | None:intergenic | 30.0% | |
| GATTCCAAAAGTGGTAAAAA+TGG | + | chr5.1:26675548-26675567 | MS.gene45142:CDS | 30.0% | |
| GGGATAGAACATTCAAAATT+TGG | + | chr5.1:26674964-26674983 | MS.gene45142:CDS | 30.0% | |
| TACTAAGGCTATATTGTGTT+TGG | + | chr5.1:26675382-26675401 | MS.gene45142:CDS | 30.0% | |
| TATATTGTGTTTGGTTGTGA+TGG | + | chr5.1:26675391-26675410 | MS.gene45142:CDS | 30.0% | |
| TTCTGAATGAATGTGATCAT+GGG | - | chr5.1:26674382-26674401 | None:intergenic | 30.0% | |
| ! | AGTTCTTATCTTGTTTACAG+TGG | + | chr5.1:26675593-26675612 | MS.gene45142:CDS | 30.0% |
| ! | GAAATTTAGAGTGTAAAGCA+AGG | - | chr5.1:26674536-26674555 | None:intergenic | 30.0% |
| ! | GAGACATAAGAAGTATACAT+GGG | + | chr5.1:26674872-26674891 | MS.gene45142:CDS | 30.0% |
| ! | TTTTGTGTGTAGCAACATAA+AGG | - | chr5.1:26674324-26674343 | None:intergenic | 30.0% |
| !! | AACAACAATCATTGACTTGA+TGG | - | chr5.1:26674673-26674692 | None:intergenic | 30.0% |
| !! | AATTGTTGTTTCATCTTCTG+GGG | + | chr5.1:26675049-26675068 | MS.gene45142:CDS | 30.0% |
| !! | AGATGGATTGTTTCTTTACT+CGG | + | chr5.1:26674935-26674954 | MS.gene45142:CDS | 30.0% |
| !! | CAATTGTTGTTTCATCTTCT+GGG | + | chr5.1:26675048-26675067 | MS.gene45142:CDS | 30.0% |
| !! | GATGGATCAGTTTTATATTC+AGG | + | chr5.1:26675239-26675258 | MS.gene45142:CDS | 30.0% |
| ATAGCAGATGATTCCAAAAG+TGG | + | chr5.1:26675539-26675558 | MS.gene45142:CDS | 35.0% | |
| CAAAAGTGGTAAAAATGGTG+GGG | + | chr5.1:26675553-26675572 | MS.gene45142:CDS | 35.0% | |
| CCAAAAGTGGTAAAAATGGT+GGG | + | chr5.1:26675552-26675571 | MS.gene45142:CDS | 35.0% | |
| CTCATCAAGATCACAAAATC+CGG | + | chr5.1:26674712-26674731 | MS.gene45142:CDS | 35.0% | |
| GCTTTAGCACTAAACAAAGA+TGG | + | chr5.1:26675221-26675240 | MS.gene45142:CDS | 35.0% | |
| TCATCAAGATCACAAAATCC+GGG | + | chr5.1:26674713-26674732 | MS.gene45142:CDS | 35.0% | |
| TCCAAAAGTGGTAAAAATGG+TGG | + | chr5.1:26675551-26675570 | MS.gene45142:CDS | 35.0% | |
| TTGAAGCTTGAAGAGCAAAA+GGG | - | chr5.1:26674605-26674624 | None:intergenic | 35.0% | |
| ! | AACTTGGTAGCAATCAGTAA+TGG | + | chr5.1:26674636-26674655 | MS.gene45142:CDS | 35.0% |
| ! | GGAGACATAAGAAGTATACA+TGG | + | chr5.1:26674871-26674890 | MS.gene45142:CDS | 35.0% |
| ! | TTGTTTCGATTTTCCAAACC+CGG | - | chr5.1:26674734-26674753 | None:intergenic | 35.0% |
| ! | TTTGAAGCTTGAAGAGCAAA+AGG | - | chr5.1:26674606-26674625 | None:intergenic | 35.0% |
| !! | GCAATTGTTGTTTCATCTTC+TGG | + | chr5.1:26675047-26675066 | MS.gene45142:CDS | 35.0% |
| !! | TTTGGTTGTGATGGATGATT+TGG | + | chr5.1:26675400-26675419 | MS.gene45142:CDS | 35.0% |
| AAGATCACAAAATCCGGGTT+TGG | + | chr5.1:26674718-26674737 | MS.gene45142:CDS | 40.0% | |
| ATGTGATCATGGGAAGAATG+AGG | - | chr5.1:26674372-26674391 | None:intergenic | 40.0% | |
| CGAAAAATTACGTGGAAGTC+AGG | + | chr5.1:26674850-26674869 | MS.gene45142:CDS | 40.0% | |
| GACGAAAATATGGTCCTAGT+TGG | + | chr5.1:26675344-26675363 | MS.gene45142:CDS | 40.0% | |
| GATTGTTGTGAAGTGAGAGA+AGG | - | chr5.1:26674453-26674472 | None:intergenic | 40.0% | |
| GTAAAGCAAGGGATGAGATA+GGG | - | chr5.1:26674524-26674543 | None:intergenic | 40.0% | |
| TAAAGCAAGGGATGAGATAG+GGG | - | chr5.1:26674523-26674542 | None:intergenic | 40.0% | |
| TGTAAAGCAAGGGATGAGAT+AGG | - | chr5.1:26674525-26674544 | None:intergenic | 40.0% | |
| !! | ATGGATGATTTGGTGTGTAG+TGG | + | chr5.1:26675410-26675429 | MS.gene45142:CDS | 40.0% |
| !! | CCCACCATTTTTACCACTTT+TGG | - | chr5.1:26675555-26675574 | None:intergenic | 40.0% |
| !! | TCTCTTGCTGTTTCGAAAGA+TGG | + | chr5.1:26674918-26674937 | MS.gene45142:CDS | 40.0% |
| !! | TCTTCTGGGGTTGTTTATAC+AGG | + | chr5.1:26675062-26675081 | MS.gene45142:CDS | 40.0% |
| AGACCCAGACGACGAAAATA+TGG | + | chr5.1:26675334-26675353 | MS.gene45142:CDS | 45.0% | |
| AGCCTTAGTATGCCCTCTTA+GGG | - | chr5.1:26675372-26675391 | None:intergenic | 45.0% | |
| GAAGGAACAGAAGGTAGACT+TGG | - | chr5.1:26674435-26674454 | None:intergenic | 45.0% | |
| GAAGTGAGAGAAGGAACAGA+AGG | - | chr5.1:26674444-26674463 | None:intergenic | 45.0% | |
| GTTTCTTTACTCGGCTTCGT+GGG | + | chr5.1:26674944-26674963 | MS.gene45142:CDS | 45.0% | |
| TGTTTCTTTACTCGGCTTCG+TGG | + | chr5.1:26674943-26674962 | MS.gene45142:CDS | 45.0% | |
| ! | AGGACCATATTTTCGTCGTC+TGG | - | chr5.1:26675341-26675360 | None:intergenic | 45.0% |
| ! | GGACCATATTTTCGTCGTCT+GGG | - | chr5.1:26675340-26675359 | None:intergenic | 45.0% |
| ! | TAGCCTTAGTATGCCCTCTT+AGG | - | chr5.1:26675373-26675392 | None:intergenic | 45.0% |
| ! | TATTTTCGTCGTCTGGGTCT+TGG | - | chr5.1:26675334-26675353 | None:intergenic | 45.0% |
| !! | GCATGTTTGGCTGTTTTGCA+AGG | + | chr5.1:26675488-26675507 | MS.gene45142:CDS | 45.0% |
| ! | TCCTAGTTGGTGCCCTAAGA+GGG | + | chr5.1:26675357-26675376 | MS.gene45142:CDS | 50.0% |
| ! | TGCCCTAAGAGGGCATACTA+AGG | + | chr5.1:26675367-26675386 | MS.gene45142:CDS | 50.0% |
| !! | GGTGGGGTTGATGATGATGA+TGG | + | chr5.1:26675569-26675588 | MS.gene45142:CDS | 50.0% |
| GTCTGGGTCTTGGTCTAGTC+CGG | - | chr5.1:26675324-26675343 | None:intergenic | 55.0% | |
| ! | GTCCTAGTTGGTGCCCTAAG+AGG | + | chr5.1:26675356-26675375 | MS.gene45142:CDS | 55.0% |
| ! | GCCCTCTTAGGGCACCAACT+AGG | - | chr5.1:26675361-26675380 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 26674303 | 26675667 | 26674303 | ID=MS.gene45142 |
| chr5.1 | mRNA | 26674303 | 26675667 | 26674303 | ID=MS.gene45142.t1;Parent=MS.gene45142 |
| chr5.1 | exon | 26674303 | 26675667 | 26674303 | ID=MS.gene45142.t1.exon1;Parent=MS.gene45142.t1 |
| chr5.1 | CDS | 26674303 | 26675667 | 26674303 | ID=cds.MS.gene45142.t1;Parent=MS.gene45142.t1 |
| Gene Sequence |
| Protein sequence |
