AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78433

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78433.t1 MTR_7g068340 98.158 380 7 0 1 380 1 380 0.0 765
MS.gene78433.t1 MTR_4g016730 71.948 385 83 5 1 373 1 372 0.0 519
MS.gene78433.t1 MTR_4g114320 35.816 282 163 7 89 360 125 398 7.24e-53 180
MS.gene78433.t1 MTR_4g114320 30.857 175 114 4 186 354 122 295 6.06e-17 82.0
MS.gene78433.t1 MTR_7g064980 34.122 296 171 6 89 362 27 320 8.55e-50 170
MS.gene78433.t1 MTR_1g012030 35.943 281 156 7 89 356 141 410 1.53e-49 172
MS.gene78433.t1 MTR_1g012030 26.437 174 124 1 186 355 138 311 5.07e-18 85.5
MS.gene78433.t1 MTR_8g027975 32.686 309 165 6 87 357 51 354 1.47e-48 168
MS.gene78433.t1 MTR_3g107510 34.495 287 168 7 87 362 122 399 2.75e-47 166
MS.gene78433.t1 MTR_3g107510 26.286 175 125 1 184 354 119 293 3.18e-18 85.9
MS.gene78433.t1 MTR_3g107510 31.937 191 109 5 85 265 214 393 8.17e-17 81.6
MS.gene78433.t1 MTR_5g009500 32.899 307 165 6 87 357 38 339 5.34e-47 164
MS.gene78433.t1 MTR_3g098460 31.333 300 173 8 78 354 189 478 3.28e-41 151
MS.gene78433.t1 MTR_3g098460 31.579 190 117 4 84 265 296 480 2.21e-21 95.9
MS.gene78433.t1 MTR_3g104600 31.475 305 172 5 80 353 28 326 8.31e-41 147
MS.gene78433.t1 MTR_3g104600 26.442 208 131 4 89 275 133 339 2.79e-16 79.7
MS.gene78433.t1 MTR_2g436930 30.592 304 171 7 88 351 16 319 4.64e-40 145
MS.gene78433.t1 MTR_2g436930 30.102 196 112 5 188 358 16 211 3.23e-17 82.0
MS.gene78433.t1 MTR_2g436930 26.108 203 120 3 87 265 128 324 3.05e-15 76.3
MS.gene78433.t1 MTR_6g091800 30.392 306 173 5 77 353 9 303 7.13e-40 144
MS.gene78433.t1 MTR_5g081150 33.793 290 168 7 89 357 36 322 8.82e-40 144
MS.gene78433.t1 MTR_8g096050 30.742 283 172 7 87 354 227 500 8.56e-38 142
MS.gene78433.t1 MTR_8g096050 32.632 190 115 4 84 265 318 502 1.13e-22 99.8
MS.gene78433.t1 MTR_8g096050 23.611 216 147 3 158 355 187 402 6.90e-17 82.4
MS.gene78433.t1 MTR_6g091800 28.788 330 171 6 77 353 9 327 8.96e-38 139
MS.gene78433.t1 MTR_6g091800 24.186 215 124 4 89 265 117 330 3.31e-14 73.6
MS.gene78433.t1 MTR_4g119770 28.339 307 178 7 88 352 15 321 1.21e-36 135
MS.gene78433.t1 MTR_4g119770 30.806 211 118 6 188 370 15 225 5.95e-21 92.8
MS.gene78433.t1 MTR_4g119770 26.601 203 119 5 87 265 129 325 1.64e-15 77.0
MS.gene78433.t1 MTR_7g084400 30.851 282 166 7 89 354 215 483 1.97e-35 135
MS.gene78433.t1 MTR_7g084400 32.778 180 113 2 89 265 311 485 3.14e-26 110
MS.gene78433.t1 MTR_7g084400 25.556 180 121 3 187 355 213 390 1.64e-11 65.9
MS.gene78433.t1 MTR_3g074490 34.680 297 154 9 89 356 118 403 5.55e-35 133
MS.gene78433.t1 MTR_3g074490 27.692 195 135 3 186 375 115 308 4.47e-15 76.6
MS.gene78433.t1 MTR_6g091800 31.020 245 145 3 77 303 9 247 3.04e-34 127
MS.gene78433.t1 MTR_6g091800 31.020 245 145 3 77 303 9 247 3.55e-34 127
MS.gene78433.t1 MTR_6g091800 32.117 137 79 5 89 215 117 249 1.04e-11 65.1
MS.gene78433.t1 MTR_8g090210 33.557 298 156 10 89 356 112 397 6.47e-34 130
MS.gene78433.t1 MTR_8g090210 27.778 180 126 2 178 353 101 280 1.64e-14 74.7
MS.gene78433.t1 MTR_6g091800 28.344 314 161 6 77 337 9 311 6.57e-33 125
MS.gene78433.t1 MTR_6g091800 28.996 269 143 4 77 303 9 271 4.30e-32 122
MS.gene78433.t1 MTR_6g091800 28.996 269 143 4 77 303 9 271 5.26e-32 122
MS.gene78433.t1 MTR_3g104500 30.104 289 178 7 89 356 36 321 8.06e-32 122
MS.gene78433.t1 MTR_6g092210 30.400 250 146 4 136 362 8 252 2.04e-31 120
MS.gene78433.t1 MTR_6g034145 29.572 257 145 5 136 362 8 258 2.90e-30 117
MS.gene78433.t1 MTR_6g034145 27.835 194 119 6 89 265 63 252 2.45e-15 75.9
MS.gene78433.t1 MTR_4g005330 28.339 307 182 8 82 360 61 357 8.37e-30 118
MS.gene78433.t1 MTR_4g119770 29.268 246 145 6 88 304 15 260 8.47e-29 113
MS.gene78433.t1 MTR_4g119770 30.806 211 118 6 188 370 15 225 2.94e-21 92.4
MS.gene78433.t1 MTR_4g005330 28.716 296 173 8 89 356 2 287 1.15e-28 113
MS.gene78433.t1 MTR_5g081150 38.378 185 102 4 89 262 36 219 5.73e-28 110
MS.gene78433.t1 MTR_5g081150 38.378 185 102 4 89 262 36 219 7.11e-28 110
MS.gene78433.t1 MTR_7g109135 30.986 284 178 8 88 358 23 301 3.74e-27 109
MS.gene78433.t1 MTR_7g109135 28.108 185 119 5 188 361 23 204 1.01e-11 65.9
MS.gene78433.t1 MTR_8g107270 29.123 285 178 10 93 355 21 303 7.49e-27 109
MS.gene78433.t1 MTR_7g109135 30.928 291 176 9 88 358 23 308 1.14e-26 108
MS.gene78433.t1 MTR_7g109135 28.042 189 119 5 188 360 23 210 1.75e-13 70.9
MS.gene78433.t1 MTR_7g109135 29.474 190 117 5 100 278 136 319 8.87e-13 68.9
MS.gene78433.t1 MTR_1g087840 29.496 278 175 8 99 358 31 305 6.01e-25 103
MS.gene78433.t1 MTR_5g055410 27.273 297 185 8 99 375 33 318 2.42e-24 102
MS.gene78433.t1 MTR_2g436930 29.386 228 129 6 156 351 2 229 7.18e-24 99.4
MS.gene78433.t1 MTR_2g436930 26.108 203 120 3 87 265 38 234 1.83e-15 75.5
MS.gene78433.t1 MTR_4g078545 30.272 294 174 8 87 356 75 361 2.50e-23 100
MS.gene78433.t1 MTR_7g066690 25.191 262 181 6 87 334 17 277 3.36e-23 99.0
MS.gene78433.t1 MTR_7g066690 26.000 200 127 4 178 356 8 207 7.70e-13 68.9
MS.gene78433.t1 MTR_7g084400 31.905 210 116 7 89 284 209 405 4.06e-23 100
MS.gene78433.t1 MTR_7g084400 25.556 180 121 3 187 355 207 384 1.17e-11 66.2
MS.gene78433.t1 MTR_8g036880 29.831 295 175 8 87 356 102 389 1.25e-22 98.6
MS.gene78433.t1 MTR_4g018750 25.191 262 181 6 87 334 15 275 2.07e-22 96.7
MS.gene78433.t1 MTR_3g028590 29.252 294 177 8 87 356 97 383 7.97e-22 96.3
MS.gene78433.t1 MTR_3g028590 29.252 294 177 8 87 356 93 379 8.20e-22 96.3
MS.gene78433.t1 MTR_2g098070 30.351 313 178 10 62 350 50 346 2.09e-21 94.7
MS.gene78433.t1 MTR_8g076760 27.817 284 177 10 103 361 30 310 1.55e-20 91.7
MS.gene78433.t1 MTR_8g098240 26.882 279 182 7 89 357 322 588 6.33e-20 92.0
MS.gene78433.t1 MTR_5g073040 27.437 277 183 6 89 353 41 311 2.03e-19 88.6
MS.gene78433.t1 MTR_6g091800 32.317 164 94 3 77 229 9 166 5.74e-19 85.1
MS.gene78433.t1 MTR_6g091910 29.268 205 124 7 77 265 9 208 1.17e-18 84.3
MS.gene78433.t1 MTR_6g091910 26.203 187 118 2 187 353 19 205 2.05e-16 77.8
MS.gene78433.t1 MTR_6g091800 30.220 182 103 3 77 240 9 184 1.45e-18 83.2
MS.gene78433.t1 MTR_4g018750 24.000 250 175 6 87 322 15 263 1.55e-17 82.4
MS.gene78433.t1 MTR_3g025800 24.522 314 190 9 79 353 23 328 5.10e-17 82.0
MS.gene78433.t1 MTR_3g462140 24.211 285 198 7 87 355 15 297 6.35e-17 80.9
MS.gene78433.t1 MTR_7g109135 29.614 233 140 8 146 358 2 230 2.26e-16 78.2
MS.gene78433.t1 MTR_7g109135 29.319 191 118 5 99 278 57 241 9.20e-13 67.8
MS.gene78433.t1 MTR_8g066975 25.763 295 190 8 87 357 8 297 1.75e-15 76.6
MS.gene78433.t1 MTR_4g057850 22.789 294 198 9 89 363 24 307 2.41e-15 76.6
MS.gene78433.t1 MTR_1g097890 29.167 216 127 7 62 269 111 308 3.14e-15 76.3
MS.gene78433.t1 MTR_1g097890 25.091 275 178 8 89 357 53 305 6.54e-15 75.1
MS.gene78433.t1 MTR_1g090330 20.415 289 204 6 91 359 18 300 3.65e-15 75.9
MS.gene78433.t1 MTR_8g092080 29.694 229 135 8 48 268 98 308 4.71e-15 75.9
MS.gene78433.t1 MTR_8g092080 24.727 275 179 7 89 357 54 306 1.02e-14 74.7
MS.gene78433.t1 MTR_1g088995 24.916 297 181 9 52 330 9 281 6.12e-15 75.1
MS.gene78433.t1 MTR_8g019480 26.147 218 129 5 187 377 35 247 2.29e-14 73.9
MS.gene78433.t1 MTR_5g030530 24.915 293 191 9 89 357 10 297 4.94e-14 72.4
MS.gene78433.t1 MTR_6g015860 25.081 307 190 12 86 363 18 313 1.13e-13 71.6
MS.gene78433.t1 MTR_3g100570 22.623 305 201 7 87 356 6 310 1.33e-13 71.2
MS.gene78433.t1 MTR_3g100570 28.351 194 117 7 89 267 126 312 7.25e-11 63.2
MS.gene78433.t1 MTR_7g109135 29.717 212 125 8 167 358 2 209 1.95e-13 69.3
MS.gene78433.t1 MTR_7g109135 29.319 191 118 5 99 278 36 220 5.19e-13 68.2
MS.gene78433.t1 MTR_8g099910 24.590 244 155 9 145 378 46 270 5.17e-13 70.1
MS.gene78433.t1 MTR_8g099910 25.188 266 169 8 84 333 70 321 9.82e-13 69.3
MS.gene78433.t1 MTR_3g104810 26.389 216 128 5 187 379 34 241 8.81e-13 69.3
MS.gene78433.t1 MTR_1g095780 28.966 145 101 2 131 273 648 792 9.98e-13 70.1
MS.gene78433.t1 MTR_1g095780 22.420 281 192 9 89 361 527 789 2.79e-12 68.6
MS.gene78433.t1 MTR_6g033280 25.146 171 120 4 193 356 70 239 1.55e-12 68.6
MS.gene78433.t1 MTR_6g033280 21.993 291 193 9 31 297 1 281 3.66e-11 64.3
MS.gene78433.t1 MTR_8g068890 31.285 179 102 7 103 267 143 314 2.15e-12 67.8
MS.gene78433.t1 MTR_6g034515 25.628 199 125 4 89 274 162 350 3.93e-12 67.4
MS.gene78433.t1 MTR_6g034515 25.994 327 210 9 25 338 16 323 5.97e-12 66.6
MS.gene78433.t1 MTR_2g102010 21.528 288 198 6 87 356 17 294 4.64e-12 66.6
MS.gene78433.t1 MTR_5g032420 27.660 188 125 4 89 267 136 321 6.17e-12 66.6
MS.gene78433.t1 MTR_5g032420 21.975 314 201 7 87 356 6 319 1.12e-11 65.5
MS.gene78433.t1 MTR_1g088995 25.571 219 140 5 52 265 9 209 1.37e-11 64.3
MS.gene78433.t1 MTR_7g015870 24.252 301 190 11 88 360 28 318 1.71e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78433.t1 AT3G51870 65.796 383 117 2 3 375 1 379 6.92e-179 502
MS.gene78433.t1 AT5G01500 76.687 326 76 0 48 373 80 405 9.45e-176 496
MS.gene78433.t1 AT4G01100 32.248 307 165 6 89 357 44 345 5.94e-49 169
MS.gene78433.t1 AT4G01100 32.227 211 110 5 87 270 145 349 6.63e-23 99.0
MS.gene78433.t1 AT4G01100 31.077 325 166 7 85 357 41 359 8.88e-47 164
MS.gene78433.t1 AT4G01100 29.391 279 153 7 19 270 102 363 9.67e-23 98.6
MS.gene78433.t1 AT4G01100 31.773 299 161 6 97 357 2 295 1.08e-46 162
MS.gene78433.t1 AT4G01100 32.227 211 110 5 87 270 95 299 2.19e-23 99.4
MS.gene78433.t1 AT4G32400 34.386 285 167 7 89 362 116 391 1.96e-46 163
MS.gene78433.t1 AT4G32400 30.131 229 143 6 51 271 172 391 1.35e-18 87.0
MS.gene78433.t1 AT4G32400 28.324 173 120 1 186 354 113 285 2.10e-18 86.3
MS.gene78433.t1 AT2G37890 32.872 289 174 5 89 358 47 334 2.21e-46 162
MS.gene78433.t1 AT3G55640 33.898 295 165 9 83 353 34 322 4.18e-44 155
MS.gene78433.t1 AT3G55640 33.898 295 165 9 83 353 34 322 4.18e-44 155
MS.gene78433.t1 AT4G26180 31.595 326 179 6 80 372 14 328 4.58e-44 155
MS.gene78433.t1 AT3G53940 32.986 288 173 6 89 357 75 361 4.72e-44 156
MS.gene78433.t1 AT5G51050 33.451 284 160 6 87 354 223 493 2.40e-39 146
MS.gene78433.t1 AT5G51050 33.333 180 113 3 89 265 320 495 5.31e-23 100
MS.gene78433.t1 AT5G61810 31.071 280 175 4 86 357 64 333 7.90e-39 142
MS.gene78433.t1 AT1G14560 30.169 295 170 4 98 362 38 326 1.51e-38 141
MS.gene78433.t1 AT3G20240 32.686 309 170 9 79 359 44 342 2.72e-38 140
MS.gene78433.t1 AT5G61810 29.118 340 212 7 33 357 151 476 2.88e-38 143
MS.gene78433.t1 AT5G48970 28.431 306 176 6 88 350 23 328 3.33e-38 140
MS.gene78433.t1 AT5G48970 31.443 194 108 5 188 356 23 216 8.00e-22 95.5
MS.gene78433.t1 AT5G48970 25.728 206 120 4 87 265 135 334 2.94e-15 76.6
MS.gene78433.t1 AT4G26180 31.597 288 156 5 80 337 14 290 3.20e-37 136
MS.gene78433.t1 AT5G07320 31.599 269 166 5 97 357 219 477 4.08e-36 137
MS.gene78433.t1 AT1G14560 30.741 270 151 4 98 337 38 301 4.03e-35 131
MS.gene78433.t1 AT3G21390 28.896 308 173 8 88 351 20 325 2.53e-34 130
MS.gene78433.t1 AT3G21390 29.000 200 119 4 188 364 20 219 3.76e-21 93.6
MS.gene78433.t1 AT3G21390 27.228 202 113 3 87 260 130 325 4.53e-14 73.2
MS.gene78433.t1 AT3G21390 28.896 308 173 8 88 351 42 347 4.53e-34 129
MS.gene78433.t1 AT3G21390 29.000 200 119 4 188 364 42 241 7.34e-21 93.2
MS.gene78433.t1 AT3G21390 27.228 202 113 3 87 260 152 347 5.18e-14 73.2
MS.gene78433.t1 AT5G64970 32.441 299 158 9 89 356 137 422 2.03e-33 129
MS.gene78433.t1 AT5G64970 29.444 180 121 3 179 353 127 305 8.04e-14 72.8
MS.gene78433.t1 AT3G55640 36.649 191 109 5 83 262 34 223 1.29e-32 123
MS.gene78433.t1 AT3G55640 25.366 205 128 6 171 353 22 223 4.73e-11 63.2
MS.gene78433.t1 AT3G55640 36.649 191 109 5 83 262 34 223 1.29e-32 123
MS.gene78433.t1 AT3G55640 25.366 205 128 6 171 353 22 223 4.73e-11 63.2
MS.gene78433.t1 AT5G48970 28.125 256 149 5 130 350 2 257 5.48e-32 122
MS.gene78433.t1 AT5G48970 31.884 138 86 3 227 356 8 145 7.57e-17 80.1
MS.gene78433.t1 AT5G48970 25.728 206 120 4 87 265 64 263 2.10e-15 75.9
MS.gene78433.t1 AT5G64970 31.104 299 162 9 89 356 13 298 2.32e-31 121
MS.gene78433.t1 AT3G53940 35.135 185 108 3 89 262 75 258 3.52e-30 117
MS.gene78433.t1 AT3G53940 30.769 208 113 7 171 353 57 258 3.16e-15 75.9
MS.gene78433.t1 AT5G64970 32.857 280 144 9 89 337 137 403 1.58e-29 118
MS.gene78433.t1 AT5G64970 29.444 180 121 3 179 353 127 305 6.97e-14 72.8
MS.gene78433.t1 AT1G78180 31.186 295 167 6 89 356 130 415 1.74e-28 115
MS.gene78433.t1 AT1G78180 29.282 181 124 2 177 353 118 298 1.40e-13 72.0
MS.gene78433.t1 AT5G56450 27.304 293 185 7 89 356 36 325 1.35e-27 111
MS.gene78433.t1 AT1G25380 27.839 273 179 5 99 354 33 304 1.76e-27 112
MS.gene78433.t1 AT1G25380 29.714 175 106 6 198 357 33 205 1.64e-13 71.6
MS.gene78433.t1 AT1G25380 27.839 273 179 5 99 354 33 304 1.76e-27 112
MS.gene78433.t1 AT1G25380 29.714 175 106 6 198 357 33 205 1.64e-13 71.6
MS.gene78433.t1 AT2G47490 29.455 275 174 7 99 356 29 300 2.51e-25 105
MS.gene78433.t1 AT2G47490 27.273 176 109 6 198 357 29 201 7.48e-11 63.2
MS.gene78433.t1 AT1G14560 28.509 228 133 3 165 362 1 228 9.48e-25 101
MS.gene78433.t1 AT1G14560 28.643 199 121 4 87 265 25 222 7.09e-17 79.7
MS.gene78433.t1 AT5G17400 29.470 302 190 10 74 355 1 299 1.03e-24 103
MS.gene78433.t1 AT3G54110 25.287 261 182 4 87 334 15 275 1.80e-23 99.8
MS.gene78433.t1 AT4G28390 30.241 291 178 9 87 356 83 369 2.88e-23 100
MS.gene78433.t1 AT4G28390 30.241 291 178 9 87 356 83 369 2.88e-23 100
MS.gene78433.t1 AT2G30160 28.169 284 182 6 86 353 41 318 4.98e-23 99.0
MS.gene78433.t1 AT3G08580 28.814 295 178 8 87 356 84 371 6.29e-22 96.7
MS.gene78433.t1 AT3G08580 28.814 295 178 8 87 356 84 371 6.29e-22 96.7
MS.gene78433.t1 AT5G13490 29.153 295 177 8 87 356 88 375 7.15e-22 96.3
MS.gene78433.t1 AT5G13490 29.153 295 177 8 87 356 88 375 7.15e-22 96.3
MS.gene78433.t1 AT1G07030 28.777 278 179 6 89 353 42 313 2.47e-21 94.0
MS.gene78433.t1 AT5G58970 24.028 283 200 6 87 355 16 297 2.78e-20 90.5
MS.gene78433.t1 AT4G03115 26.295 251 173 5 87 330 70 315 4.73e-20 90.5
MS.gene78433.t1 AT4G03115 27.869 183 115 4 87 262 166 338 1.02e-13 72.0
MS.gene78433.t1 AT4G03115 26.693 251 172 6 87 330 38 283 5.43e-20 90.1
MS.gene78433.t1 AT4G03115 27.869 183 115 4 87 262 134 306 9.33e-14 72.0
MS.gene78433.t1 AT5G66380 28.425 292 182 11 89 356 12 300 1.80e-18 85.5
MS.gene78433.t1 AT5G66380 25.592 211 125 6 188 379 11 208 1.29e-12 68.6
MS.gene78433.t1 AT1G34065 30.631 222 136 5 54 271 134 341 4.42e-18 85.1
MS.gene78433.t1 AT1G14140 25.632 277 175 8 97 350 26 294 5.06e-18 84.3
MS.gene78433.t1 AT1G14140 27.225 191 126 3 73 259 113 294 5.98e-15 75.1
MS.gene78433.t1 AT1G14140 24.615 195 119 4 186 356 15 205 2.43e-11 64.7
MS.gene78433.t1 AT1G34065 30.631 222 136 5 54 271 127 334 5.23e-18 84.7
MS.gene78433.t1 AT4G03115 26.852 216 146 5 122 330 2 212 1.39e-17 81.6
MS.gene78433.t1 AT4G03115 27.869 183 115 4 87 262 63 235 6.84e-14 71.2
MS.gene78433.t1 AT4G11440 26.056 284 184 8 89 357 332 604 2.70e-17 84.0
MS.gene78433.t1 AT4G11440 25.424 177 122 5 189 359 332 504 1.42e-11 66.2
MS.gene78433.t1 AT4G11440 26.056 284 184 8 89 357 332 604 2.70e-17 84.0
MS.gene78433.t1 AT4G11440 25.424 177 122 5 189 359 332 504 1.42e-11 66.2
MS.gene78433.t1 AT4G03115 27.000 200 138 4 138 330 22 220 2.93e-17 81.3
MS.gene78433.t1 AT4G03115 27.869 183 115 4 87 262 71 243 1.04e-13 70.9
MS.gene78433.t1 AT4G03115 30.168 179 120 3 87 265 38 211 5.40e-17 79.7
MS.gene78433.t1 AT4G03115 30.168 179 120 3 87 265 38 211 5.57e-17 79.7
MS.gene78433.t1 AT4G03115 27.027 185 117 6 183 356 34 211 9.01e-11 62.0
MS.gene78433.t1 AT4G39460 30.837 227 133 6 49 268 105 314 6.13e-17 81.3
MS.gene78433.t1 AT4G39460 30.837 227 133 6 49 268 105 314 6.13e-17 81.3
MS.gene78433.t1 AT4G39460 30.837 227 133 6 49 268 105 314 6.13e-17 81.3
MS.gene78433.t1 AT5G46800 30.208 192 121 3 87 265 108 299 1.88e-16 79.7
MS.gene78433.t1 AT5G46800 26.370 292 187 10 87 353 8 296 2.98e-15 76.3
MS.gene78433.t1 AT5G46800 30.208 192 121 3 87 265 108 299 1.88e-16 79.7
MS.gene78433.t1 AT5G46800 26.370 292 187 10 87 353 8 296 2.98e-15 76.3
MS.gene78433.t1 AT5G46800 30.208 192 121 3 87 265 108 299 1.88e-16 79.7
MS.gene78433.t1 AT5G46800 26.370 292 187 10 87 353 8 296 2.98e-15 76.3
MS.gene78433.t1 AT5G26200 23.214 280 177 6 120 361 63 342 4.39e-14 73.2
MS.gene78433.t1 AT5G26200 26.768 198 121 5 187 362 41 236 7.14e-13 69.3
MS.gene78433.t1 AT5G58970 24.242 231 161 5 87 303 16 246 1.60e-13 70.5
MS.gene78433.t1 AT1G74240 23.226 310 196 9 79 353 31 333 2.13e-13 71.2
MS.gene78433.t1 AT5G01340 23.944 284 189 9 89 352 19 295 2.15e-13 70.9
MS.gene78433.t1 AT4G24570 22.623 305 201 7 87 356 6 310 4.26e-13 69.7
MS.gene78433.t1 AT2G22500 23.510 302 198 8 87 355 6 307 1.14e-12 68.6
MS.gene78433.t1 AT2G35800 21.942 278 196 8 89 360 547 809 1.51e-12 69.7
MS.gene78433.t1 AT5G09470 23.504 234 166 4 136 356 99 332 1.61e-12 68.6
MS.gene78433.t1 AT5G09470 26.230 183 130 3 89 267 153 334 5.36e-11 63.9
MS.gene78433.t1 AT5G14040 22.917 192 137 4 176 356 67 258 6.28e-12 67.0
MS.gene78433.t1 AT5G14040 25.668 187 121 5 85 261 76 254 1.19e-11 65.9
MS.gene78433.t1 AT1G72820 26.738 187 118 4 187 356 33 217 2.12e-11 65.1
MS.gene78433.t1 AT1G72820 26.738 187 118 4 187 356 33 217 2.12e-11 65.1
MS.gene78433.t1 AT5G42130 24.345 267 182 5 103 356 134 393 4.73e-11 64.3

Find 105 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAAAACTTATTGCCTTCT+TGG 0.159399 7.4:-35359189 None:intergenic
AGCGAAATGGTTGTGAATTT+TGG 0.203604 7.4:-35357635 None:intergenic
TTCCTTCCCTATAACTGTTA+TGG 0.268506 7.4:-35360632 None:intergenic
ATACAGGCCATAACAGTTAT+AGG 0.271787 7.4:+35360625 MS.gene78433:intron
GACGGAGATAGAGGCGAATT+TGG 0.318446 7.4:-35357605 None:intergenic
CGTAATCTCAGAACATCTAA+TGG 0.319486 7.4:-35361236 None:intergenic
GCTTCTAATACTGTTGTATA+AGG 0.327872 7.4:-35361735 None:intergenic
AAGAAGGGATTAGAGGTTAC+TGG 0.331584 7.4:+35360653 MS.gene78433:CDS
CCCTCAATTGCATTTGTCTT+CGG 0.341700 7.4:-35361707 None:intergenic
TGGAGTTGCTGGTTTGTATC+GGG 0.343116 7.4:+35362100 MS.gene78433:CDS
AAAAGCTGAACGGCACTATA+AGG 0.354999 7.4:-35360813 None:intergenic
TATACTCACTGCTGTGCTTT+CGG 0.358781 7.4:+35361644 MS.gene78433:CDS
GCGGAGAAGGGAATAGGAAT+TGG 0.360775 7.4:-35357542 None:intergenic
GGGAAGGAAGAAGGGATTAG+AGG 0.364731 7.4:+35360646 MS.gene78433:CDS
AGACTCATGGTGTGCGGGTC+GGG 0.365341 7.4:+35359156 MS.gene78433:intron
ACGACGTCGCATTTGAGGTT+GGG 0.396054 7.4:-35357514 None:intergenic
GTGGCACGGGATGGAGTTGC+TGG 0.410856 7.4:+35362089 MS.gene78433:CDS
ATGGAGTTGCTGGTTTGTAT+CGG 0.413769 7.4:+35362099 MS.gene78433:CDS
GCATCTTTCTACAAAGGCCT+TGG 0.416799 7.4:+35361421 MS.gene78433:CDS
TACAGGCCATAACAGTTATA+GGG 0.422122 7.4:+35360626 MS.gene78433:intron
GTGAAACGACGTCGCATTTG+AGG 0.425352 7.4:-35357519 None:intergenic
TTCGCCGCCGGAGCATTCGC+CGG 0.426220 7.4:+35357727 MS.gene78433:CDS
AGCAGCGCCGGCGAATGCTC+CGG 0.426713 7.4:-35357734 None:intergenic
GGTGGAGGAGAAGGTGAGTA+TGG 0.431285 7.4:-35357572 None:intergenic
CGACGTCGCATTTGAGGTTG+GGG 0.434401 7.4:-35357513 None:intergenic
GAATTTGGTGTCTGCGGTGG+TGG 0.438357 7.4:-35357590 None:intergenic
AGGTTGCCTTGTGCATGCTA+AGG 0.443637 7.4:+35361386 MS.gene78433:intron
AATTATTCACGGGACAGAAT+GGG 0.450125 7.4:+35360936 MS.gene78433:CDS
CGGAGAAGGGAATAGGAATT+GGG 0.455506 7.4:-35357541 None:intergenic
GTTATGGCGGAGAAGGGAAT+AGG 0.459083 7.4:-35357548 None:intergenic
GTAATCTCAGAACATCTAAT+GGG 0.459227 7.4:-35361235 None:intergenic
AGAAGGTGAGTATGGCGTTA+TGG 0.462176 7.4:-35357564 None:intergenic
TGATTATTTACTTACAAAAG+TGG 0.467191 7.4:-35361011 None:intergenic
ACAGTATTAGAAGCGTTTGC+AGG 0.467598 7.4:+35361744 MS.gene78433:CDS
GAAAACAGGAACCTGCTGTT+TGG 0.468544 7.4:-35362152 None:intergenic
GGCTTCGGCGACGGAGATAG+AGG 0.473205 7.4:-35357614 None:intergenic
AAATTATTCACGGGACAGAA+TGG 0.474543 7.4:+35360935 MS.gene78433:CDS
GTCTGCGGTGGTGGAGGAGA+AGG 0.476312 7.4:-35357581 None:intergenic
CAGTTATAGGGAAGGAAGAA+GGG 0.481190 7.4:+35360638 MS.gene78433:CDS
TCCGAAGACAAATGCAATTG+AGG 0.481972 7.4:+35361706 MS.gene78433:CDS
AATGGCGGTTTCGTCGTTGA+AGG 0.483530 7.4:-35357473 None:intergenic
ACAGTTATAGGGAAGGAAGA+AGG 0.484180 7.4:+35360637 MS.gene78433:CDS
GCGCTTAACAATGTCATATG+AGG 0.492227 7.4:-35362297 None:intergenic
CAGGAACCTGCTGTTTGGTA+GGG 0.497858 7.4:-35362147 None:intergenic
CCGAAGACAAATGCAATTGA+GGG 0.499987 7.4:+35361707 MS.gene78433:CDS
CAGACTCATGGTGTGCGGGT+CGG 0.510974 7.4:+35359155 MS.gene78433:intron
GATGCTGCTCTCTTCGCCGC+CGG 0.513066 7.4:+35357715 MS.gene78433:CDS
GGGATTAGAGGTTACTGGAA+GGG 0.515473 7.4:+35360658 MS.gene78433:CDS
GTATGGCGTTATGGCGGAGA+AGG 0.517155 7.4:-35357555 None:intergenic
GGTTGCCTTGTGCATGCTAA+GGG 0.518421 7.4:+35361387 MS.gene78433:intron
ACAGGAACCTGCTGTTTGGT+AGG 0.519867 7.4:-35362148 None:intergenic
GATTTACAGAAATTATTCAC+GGG 0.523513 7.4:+35360926 MS.gene78433:intron
TTTGGTGTCTGCGGTGGTGG+AGG 0.529142 7.4:-35357587 None:intergenic
CACAATGTATTTCAGACTCA+TGG 0.529490 7.4:+35359143 MS.gene78433:intron
CCAGGTATTGTGGCACGGGA+TGG 0.534064 7.4:+35362080 MS.gene78433:intron
GAACGTCTTAGCAGCAGCGC+CGG 0.534226 7.4:-35357746 None:intergenic
GGATTTACAGAAATTATTCA+CGG 0.538559 7.4:+35360925 MS.gene78433:intron
AACGACGTCGCATTTGAGGT+TGG 0.539005 7.4:-35357515 None:intergenic
CCGTATCAAGCTCCTCATGC+AGG 0.542507 7.4:+35357783 MS.gene78433:CDS
TCTGACATGGTTCGATAACC+AGG 0.542747 7.4:-35361272 None:intergenic
TTACGATTAGCTGTTGAACC+TGG 0.549351 7.4:+35361254 MS.gene78433:CDS
AGCGCCGGCGAATGCTCCGG+CGG 0.549837 7.4:-35357731 None:intergenic
GGATTTGCATCTTTCTACAA+AGG 0.552288 7.4:+35361415 MS.gene78433:CDS
GCGAAGAGAGCAGCATCTCT+CGG 0.556053 7.4:-35357709 None:intergenic
AGGGATTAGAGGTTACTGGA+AGG 0.557205 7.4:+35360657 MS.gene78433:CDS
GGAGTTGCTGGTTTGTATCG+GGG 0.562121 7.4:+35362101 MS.gene78433:CDS
CACACTTACATGCTATCCTC+TGG 0.563096 7.4:+35361677 MS.gene78433:CDS
GAATGGGGAGCTATCTGTTG+TGG 0.567627 7.4:+35360952 MS.gene78433:CDS
GAGACGGTGTGGGAGCGAAA+TGG 0.567686 7.4:-35357648 None:intergenic
CGGGCAAGAAAGTGCCAAGA+AGG 0.569284 7.4:+35359175 MS.gene78433:CDS
TTGTGCATGCTAAGGGAGGA+AGG 0.571375 7.4:+35361394 MS.gene78433:CDS
GTTGTGGCAAGACTTTCAGC+AGG 0.580658 7.4:+35360968 MS.gene78433:CDS
GATGCCAGGTATTGTGGCAC+GGG 0.583143 7.4:+35362076 MS.gene78433:intron
CTGGAAGGGAAACCTCCCTC+AGG 0.583784 7.4:+35360672 MS.gene78433:CDS
ATTTCAGACTCATGGTGTGC+GGG 0.585611 7.4:+35359151 MS.gene78433:intron
ATTATTCACGGGACAGAATG+GGG 0.588186 7.4:+35360937 MS.gene78433:CDS
TATGTTGATGCCAGGTATTG+TGG 0.592151 7.4:+35362070 MS.gene78433:intron
GGAGCTATTGCAATAAGAGA+AGG 0.592793 7.4:-35361445 None:intergenic
TGAAAACCCTACCAAACAGC+AGG 0.592894 7.4:+35362141 MS.gene78433:CDS
GCGGTATGCGCACCTGCATG+AGG 0.601158 7.4:-35357795 None:intergenic
GGCCATAACAGTTATAGGGA+AGG 0.608052 7.4:+35360630 MS.gene78433:intron
ACGAAACCGCCATTATCTCA+TGG 0.609769 7.4:+35357482 MS.gene78433:CDS
CCTGCATGAGGAGCTTGATA+CGG 0.610093 7.4:-35357783 None:intergenic
TATGGCGTTATGGCGGAGAA+GGG 0.611123 7.4:-35357554 None:intergenic
TATTTCAGACTCATGGTGTG+CGG 0.623467 7.4:+35359150 MS.gene78433:intron
TGCCTTGTGCATGCTAAGGG+AGG 0.627184 7.4:+35361390 MS.gene78433:CDS
AGAATTTCAAACAATTACAG+AGG 0.628874 7.4:+35362340 MS.gene78433:CDS
TGATGCCAGGTATTGTGGCA+CGG 0.637399 7.4:+35362075 MS.gene78433:intron
TAATTGTACTGACCTGAGGG+AGG 0.638590 7.4:-35360684 None:intergenic
GGCGAATTTGGTGTCTGCGG+TGG 0.639073 7.4:-35357593 None:intergenic
GGATGTTTGAGAAGCTGAGA+CGG 0.640740 7.4:-35357664 None:intergenic
CAGAGGATAGCATGTAAGTG+TGG 0.643661 7.4:-35361676 None:intergenic
TTCCTCCCTTAGCATGCACA+AGG 0.646672 7.4:-35361392 None:intergenic
TTTGAGAAGCTGAGACGGTG+TGG 0.647188 7.4:-35357659 None:intergenic
TGTCTTCGGACTGTGTCCAG+AGG 0.651261 7.4:-35361693 None:intergenic
GTTCAATCATACCTCTGACA+TGG 0.651544 7.4:-35361285 None:intergenic
ACAAACGCTAATGCAGCGAG+TGG 0.653402 7.4:-35357685 None:intergenic
AGAGGCGAATTTGGTGTCTG+CGG 0.659207 7.4:-35357596 None:intergenic
AGGTGAGTATGGCGTTATGG+CGG 0.673525 7.4:-35357561 None:intergenic
TTTGCGCCATGAGATAATGG+CGG 0.674310 7.4:-35357488 None:intergenic
TTGAGAAGCTGAGACGGTGT+GGG 0.676528 7.4:-35357658 None:intergenic
CGAAGACAAATGCAATTGAG+GGG 0.679947 7.4:+35361708 MS.gene78433:CDS
TGGTTATCGAACCATGTCAG+AGG 0.681761 7.4:+35361274 MS.gene78433:CDS
TTGCAATAAGAGAAGGACCA+AGG 0.683191 7.4:-35361438 None:intergenic
AGGAGCTTGATACGGTCGAG+CGG 0.695661 7.4:-35357775 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAAATTAGATACATA+TGG - chr7.4:35361184-35361203 None:intergenic 10.0%
!! ATTGAAGAAAAATAAATTAA+AGG + chr7.4:35360071-35360090 MS.gene78433:intron 10.0%
!!! ATCTTATTTTTATAAACAAT+AGG - chr7.4:35362179-35362198 None:intergenic 10.0%
!!! TTTTTTTTTTTTTGAAAACT+CGG + chr7.4:35358553-35358572 MS.gene78433:intron 10.0%
!! AAAAAATGTATTAAAGAATC+TGG + chr7.4:35361863-35361882 MS.gene78433:intron 15.0%
!! GAAATAAAATGAAAATAAGA+TGG + chr7.4:35358993-35359012 MS.gene78433:intron 15.0%
!! TGAAAATGAAAATAGAAAAA+AGG + chr7.4:35359049-35359068 MS.gene78433:intron 15.0%
!!! AATTACTAGTTTTAGTTTAT+TGG + chr7.4:35360499-35360518 MS.gene78433:intron 15.0%
!!! ACTTATAAACAATTTTTCTT+CGG + chr7.4:35358136-35358155 MS.gene78433:intron 15.0%
!!! ATCTGAATTATTTTATTGTA+AGG + chr7.4:35362023-35362042 MS.gene78433:intron 15.0%
!!! ATGATTTTATTTATTTTGAC+AGG - chr7.4:35361929-35361948 None:intergenic 15.0%
!!! GTATTTTTTAGTAATTTTGT+GGG + chr7.4:35361521-35361540 MS.gene78433:intron 15.0%
!!! TCTGAATTATTTTATTGTAA+GGG + chr7.4:35362024-35362043 MS.gene78433:intron 15.0%
!!! TGTATTTTTTAGTAATTTTG+TGG + chr7.4:35361520-35361539 MS.gene78433:intron 15.0%
!!! TTTTGCTTATGAATTTTATA+AGG + chr7.4:35360833-35360852 MS.gene78433:CDS 15.0%
!! ATCACATGAAAATAAAATAC+AGG + chr7.4:35360609-35360628 MS.gene78433:intron 20.0%
!! CTTATTGTGTTTAATATTGT+AGG + chr7.4:35361070-35361089 MS.gene78433:intron 20.0%
!! TAATCTTTGTCTTTGATAAA+GGG + chr7.4:35358788-35358807 MS.gene78433:intron 20.0%
!! TGATTATTTACTTACAAAAG+TGG - chr7.4:35361014-35361033 None:intergenic 20.0%
!! TTAATCTTTGTCTTTGATAA+AGG + chr7.4:35358787-35358806 MS.gene78433:intron 20.0%
!!! AAGTTTTTAGTTGATAATCT+TGG + chr7.4:35359566-35359585 MS.gene78433:intron 20.0%
!!! CTTATAAACAATTTTTCTTC+GGG + chr7.4:35358137-35358156 MS.gene78433:intron 20.0%
!!! GTAAAACCATTTTAGAATTT+TGG + chr7.4:35358344-35358363 MS.gene78433:intron 20.0%
!!! TATATTTTGAAAATAATGGG+AGG + chr7.4:35359967-35359986 MS.gene78433:intron 20.0%
! AAAGTTACAGTTACAAGTTT+CGG - chr7.4:35357886-35357905 None:intergenic 25.0%
! AAATAAAATCATGCTAGTCA+TGG + chr7.4:35361937-35361956 MS.gene78433:intron 25.0%
! AACACTAGTCAATGTTTATA+CGG - chr7.4:35360746-35360765 None:intergenic 25.0%
! AATATCGCAATGATCTATAT+GGG + chr7.4:35359532-35359551 MS.gene78433:intron 25.0%
! AATGTTTACGAATATGTTGT+AGG + chr7.4:35359302-35359321 MS.gene78433:intron 25.0%
! ACAACATATTCGTAAACATT+TGG - chr7.4:35359302-35359321 None:intergenic 25.0%
! AGAATTTCAAACAATTACAG+AGG + chr7.4:35362340-35362359 MS.gene78433:CDS 25.0%
! ATATTCGTAAACATTTGGAT+TGG - chr7.4:35359297-35359316 None:intergenic 25.0%
! CTAAATTGTGAATCTTCAAT+AGG + chr7.4:35357992-35358011 MS.gene78433:intron 25.0%
! CTTATAAAAACCGTTTAGTA+AGG + chr7.4:35358099-35358118 MS.gene78433:intron 25.0%
! GATTTACAGAAATTATTCAC+GGG + chr7.4:35360926-35360945 MS.gene78433:intron 25.0%
! GGATTTACAGAAATTATTCA+CGG + chr7.4:35360925-35360944 MS.gene78433:intron 25.0%
! TAATATCGCAATGATCTATA+TGG + chr7.4:35359531-35359550 MS.gene78433:intron 25.0%
! TAATCAAACCTTCAAAAACA+AGG + chr7.4:35358514-35358533 MS.gene78433:intron 25.0%
! TATAAACAATAGGAGAAAAC+AGG - chr7.4:35362169-35362188 None:intergenic 25.0%
! TGCAATATTAGTTGAAACAA+TGG - chr7.4:35360160-35360179 None:intergenic 25.0%
! TGGTTAGTAATTGGTATTTA+CGG + chr7.4:35360296-35360315 MS.gene78433:intron 25.0%
! TGTTTGTAAGGATTTGTATT+CGG + chr7.4:35360464-35360483 MS.gene78433:intron 25.0%
! TTTAATCTATCACCCATAAA+AGG - chr7.4:35361582-35361601 None:intergenic 25.0%
! TTTCATTGATGTCAAAAAGT+AGG + chr7.4:35359622-35359641 MS.gene78433:intron 25.0%
!! AACTGTTGAAGTTTAAAACA+AGG - chr7.4:35359934-35359953 None:intergenic 25.0%
!! ACCCAAAAATTTAAGCTTTT+GGG - chr7.4:35360021-35360040 None:intergenic 25.0%
!! ATCCCAAAAGCTTAAATTTT+TGG + chr7.4:35360016-35360035 MS.gene78433:intron 25.0%
!! CTGATATCATCTTAGAATTT+TGG + chr7.4:35358060-35358079 MS.gene78433:intron 25.0%
!! CTTTTTGACATCAATGAAAT+TGG - chr7.4:35359621-35359640 None:intergenic 25.0%
!! GATGGAATTCTTGATTTTAA+GGG + chr7.4:35359743-35359762 MS.gene78433:intron 25.0%
!! GTACAACCAAAATTCTAAAA+TGG - chr7.4:35358353-35358372 None:intergenic 25.0%
!! GTACTTAACACATTTTCTAT+AGG + chr7.4:35358369-35358388 MS.gene78433:intron 25.0%
!! TAGGCTTTTCTAAATTGATT+GGG + chr7.4:35359641-35359660 MS.gene78433:intron 25.0%
!! TCCCAAAAGCTTAAATTTTT+GGG + chr7.4:35360017-35360036 MS.gene78433:intron 25.0%
!! TGATGGAATTCTTGATTTTA+AGG + chr7.4:35359742-35359761 MS.gene78433:intron 25.0%
!!! AGCTTCTTTTTTAATGTTAC+AGG + chr7.4:35360776-35360795 MS.gene78433:intron 25.0%
!!! CATGTTTGAAGTTCTATTTT+TGG + chr7.4:35360904-35360923 MS.gene78433:intron 25.0%
!!! GGTTTTATCTCATTTAATGT+GGG + chr7.4:35358158-35358177 MS.gene78433:intron 25.0%
AAACATGCACTTAGTTAGTT+AGG - chr7.4:35358187-35358206 None:intergenic 30.0%
AACAAAACTTATTGCCTTCT+TGG - chr7.4:35359192-35359211 None:intergenic 30.0%
ACATTTCTCACCTTACTAAA+CGG - chr7.4:35358112-35358131 None:intergenic 30.0%
AGAACTTCCAAAAAGTAGTT+GGG - chr7.4:35360864-35360883 None:intergenic 30.0%
ATTGGGATAACAATAACAAC+AGG + chr7.4:35359658-35359677 MS.gene78433:intron 30.0%
CAATCAGTATTGTCAAATAG+CGG - chr7.4:35358966-35358985 None:intergenic 30.0%
CCAATCAACACTTAAAAGTT+AGG - chr7.4:35359248-35359267 None:intergenic 30.0%
GCTTCTAATACTGTTGTATA+AGG - chr7.4:35361738-35361757 None:intergenic 30.0%
GGGAGAATTGTTTATTATAG+AGG + chr7.4:35362044-35362063 MS.gene78433:intron 30.0%
GTAATCTCAGAACATCTAAT+GGG - chr7.4:35361238-35361257 None:intergenic 30.0%
TAACTAACTAAGTGCATGTT+TGG + chr7.4:35358186-35358205 MS.gene78433:intron 30.0%
TAGAACTTCCAAAAAGTAGT+TGG - chr7.4:35360865-35360884 None:intergenic 30.0%
TCAACACTTAAAAGTTAGGA+AGG - chr7.4:35359244-35359263 None:intergenic 30.0%
TCAACTACTTACTGTTTGTA+AGG + chr7.4:35360452-35360471 MS.gene78433:intron 30.0%
TCAGTTACAATTTGTCTATG+AGG - chr7.4:35357934-35357953 None:intergenic 30.0%
TCATATGACAATATCATCTC+CGG - chr7.4:35359462-35359481 None:intergenic 30.0%
TGAAAAAGCTAGCAGTTAAA+TGG - chr7.4:35359777-35359796 None:intergenic 30.0%
TTCATAAGCAAAAAGCTGAA+CGG - chr7.4:35360826-35360845 None:intergenic 30.0%
! ATCTTGACTCATTTCCTTTT+TGG + chr7.4:35360546-35360565 MS.gene78433:intron 30.0%
! CACCCAAAAATTTAAGCTTT+TGG - chr7.4:35360022-35360041 None:intergenic 30.0%
! GCTACATTTTTATGCTTTCT+TGG + chr7.4:35362225-35362244 MS.gene78433:intron 30.0%
! GTAGGCTTTTCTAAATTGAT+TGG + chr7.4:35359640-35359659 MS.gene78433:intron 30.0%
! GTTGAAGTTTAAAACAAGGT+TGG - chr7.4:35359930-35359949 None:intergenic 30.0%
! TAATGGGTAAGTTATCTACA+AGG - chr7.4:35361222-35361241 None:intergenic 30.0%
! TATTTTCTGCTATCTGTGAT+TGG - chr7.4:35358839-35358858 None:intergenic 30.0%
! TGACAATACTGATTGGAAAT+AGG + chr7.4:35358971-35358990 MS.gene78433:intron 30.0%
! TGAGAATCCTTACCTTTTAT+GGG + chr7.4:35361567-35361586 MS.gene78433:intron 30.0%
! TTAGTAATTTTGTGGGAGAA+TGG + chr7.4:35361528-35361547 MS.gene78433:intron 30.0%
! TTGAGAATCCTTACCTTTTA+TGG + chr7.4:35361566-35361585 MS.gene78433:intron 30.0%
!! GGGTTTTATCTCATTTAATG+TGG + chr7.4:35358157-35358176 MS.gene78433:intron 30.0%
!! TTCAATAGGCTCTAAACATA+TGG + chr7.4:35358006-35358025 MS.gene78433:intron 30.0%
!!! CCTAACTTTTAAGTGTTGAT+TGG + chr7.4:35359245-35359264 MS.gene78433:intron 30.0%
!!! TGACGTTTTTTTGTTTGTTG+CGG - chr7.4:35362370-35362389 None:intergenic 30.0%
AAATTAAGCCGATCCAAACA+TGG - chr7.4:35358434-35358453 None:intergenic 35.0%
AAATTATTCACGGGACAGAA+TGG + chr7.4:35360935-35360954 MS.gene78433:CDS 35.0%
AACCTGGAAAAACCACAAAA+TGG - chr7.4:35361371-35361390 None:intergenic 35.0%
AACTTCCAAAAAGTAGTTGG+GGG - chr7.4:35360862-35360881 None:intergenic 35.0%
AAGATCATCAAGCAAAGAGA+TGG - chr7.4:35360531-35360550 None:intergenic 35.0%
AATTATTCACGGGACAGAAT+GGG + chr7.4:35360936-35360955 MS.gene78433:CDS 35.0%
AATTGTAGCCATCTTGTAGA+AGG + chr7.4:35360364-35360383 MS.gene78433:intron 35.0%
ACAAGTATTATGCTACTACC+TGG + chr7.4:35359482-35359501 MS.gene78433:intron 35.0%
AGAGCTTAGTACATCCAAAA+AGG - chr7.4:35360563-35360582 None:intergenic 35.0%
AGATCATCAAGCAAAGAGAT+GGG - chr7.4:35360530-35360549 None:intergenic 35.0%
AGTTAACTGACAGCAGAAAA+AGG + chr7.4:35360219-35360238 MS.gene78433:intron 35.0%
ATACAGGCCATAACAGTTAT+AGG + chr7.4:35360625-35360644 MS.gene78433:intron 35.0%
ATTGTAGCCATCTTGTAGAA+GGG + chr7.4:35360365-35360384 MS.gene78433:intron 35.0%
ATTGTCAAATAGCGGCTAAA+GGG - chr7.4:35358958-35358977 None:intergenic 35.0%
CAAACCTTCAAAAACAAGGT+AGG + chr7.4:35358518-35358537 MS.gene78433:intron 35.0%
CAAGTATTATGCTACTACCT+GGG + chr7.4:35359483-35359502 MS.gene78433:intron 35.0%
CACAATGTATTTCAGACTCA+TGG + chr7.4:35359143-35359162 MS.gene78433:intron 35.0%
CGCTATTTGACAATACTGAT+TGG + chr7.4:35358964-35358983 MS.gene78433:intron 35.0%
CGTAATCTCAGAACATCTAA+TGG - chr7.4:35361239-35361258 None:intergenic 35.0%
CTAAATTCCCTTCTACAAGA+TGG - chr7.4:35360375-35360394 None:intergenic 35.0%
CTATGAAACAACAAAGGCAA+AGG - chr7.4:35361042-35361061 None:intergenic 35.0%
GAACTTCCAAAAAGTAGTTG+GGG - chr7.4:35360863-35360882 None:intergenic 35.0%
GCAAACCTATGAAACAACAA+AGG - chr7.4:35361048-35361067 None:intergenic 35.0%
GGATTACTCGATTATTGGAT+CGG - chr7.4:35358582-35358601 None:intergenic 35.0%
GGATTTGCATCTTTCTACAA+AGG + chr7.4:35361415-35361434 MS.gene78433:CDS 35.0%
GTAATTGGTATTTACGGACT+TGG + chr7.4:35360302-35360321 MS.gene78433:intron 35.0%
TACAGGCCATAACAGTTATA+GGG + chr7.4:35360626-35360645 MS.gene78433:intron 35.0%
TAGGTATCTGTATGGGAATT+GGG + chr7.4:35359414-35359433 MS.gene78433:intron 35.0%
TAGTCACAACATAGTCCAAA+AGG - chr7.4:35359396-35359415 None:intergenic 35.0%
TATTGTCAAATAGCGGCTAA+AGG - chr7.4:35358959-35358978 None:intergenic 35.0%
TCTATCACCCATAAAAGGTA+AGG - chr7.4:35361577-35361596 None:intergenic 35.0%
TCTGACGCTAAAAAGTAAAC+CGG - chr7.4:35361781-35361800 None:intergenic 35.0%
TGATAAGATCCATACCTTCT+TGG + chr7.4:35360128-35360147 MS.gene78433:intron 35.0%
TGATACGATTCAAAGAGACA+AGG - chr7.4:35359698-35359717 None:intergenic 35.0%
TTAGGAAGGAAACAACGAAA+AGG - chr7.4:35359230-35359249 None:intergenic 35.0%
TTATCTCATCCAATGTGAGA+AGG + chr7.4:35358394-35358413 MS.gene78433:intron 35.0%
TTCCTTCCCTATAACTGTTA+TGG - chr7.4:35360635-35360654 None:intergenic 35.0%
TTGTGACTAGGTATCTGTAT+GGG + chr7.4:35359407-35359426 MS.gene78433:intron 35.0%
! AGCGAAATGGTTGTGAATTT+TGG - chr7.4:35357638-35357657 None:intergenic 35.0%
! AGCTAAGAATGGATTTGAAG+TGG + chr7.4:35360100-35360119 MS.gene78433:intron 35.0%
! CTATTTTCTTTCGATAGTGC+TGG + chr7.4:35360336-35360355 MS.gene78433:intron 35.0%
! GTTCTCTTTTGATACTTCTC+AGG - chr7.4:35361615-35361634 None:intergenic 35.0%
! TACCATTTTGTGGTTTTTCC+AGG + chr7.4:35361366-35361385 MS.gene78433:intron 35.0%
! TATGTTCTAAATTGCGAGCT+TGG + chr7.4:35358241-35358260 MS.gene78433:intron 35.0%
! TCATGTTGCTGGTTAGTAAT+TGG + chr7.4:35360287-35360306 MS.gene78433:intron 35.0%
! TGAAAATAATGGGAGGTAGA+GGG + chr7.4:35359974-35359993 MS.gene78433:intron 35.0%
! TTGAAAATAATGGGAGGTAG+AGG + chr7.4:35359973-35359992 MS.gene78433:intron 35.0%
! TTTTGGACTATGTTGTGACT+AGG + chr7.4:35359395-35359414 MS.gene78433:intron 35.0%
!! AACATTTGGATTGGTACAAC+AGG - chr7.4:35359288-35359307 None:intergenic 35.0%
!! CTTTGCCTTTGTTGTTTCAT+AGG + chr7.4:35361040-35361059 MS.gene78433:intron 35.0%
!!! ACAACCTACCTTGTTTTTGA+AGG - chr7.4:35358525-35358544 None:intergenic 35.0%
!!! ATGGTTGTGAATTTTGGCTT+CGG - chr7.4:35357632-35357651 None:intergenic 35.0%
!!! ATTTTTGGGTGAAACATCGA+TGG + chr7.4:35360031-35360050 MS.gene78433:intron 35.0%
!!! GAAGGCAATAAGTTTTGTTG+AGG + chr7.4:35359193-35359212 MS.gene78433:CDS 35.0%
!!! GCTGTTTTTTATATGCAGCT+TGG - chr7.4:35360398-35360417 None:intergenic 35.0%
AAAAGCTGAACGGCACTATA+AGG - chr7.4:35360816-35360835 None:intergenic 40.0%
AAAGGCGATGTAGCTAAGAA+TGG + chr7.4:35360089-35360108 MS.gene78433:intron 40.0%
AACAATGGAGTCTACCAAGA+AGG - chr7.4:35360145-35360164 None:intergenic 40.0%
AACCTACCTTGAAACCCATT+TGG - chr7.4:35358764-35358783 None:intergenic 40.0%
AAGAAGGGATTAGAGGTTAC+TGG + chr7.4:35360653-35360672 MS.gene78433:CDS 40.0%
ACAGCCTATGAAATATCCGT+TGG - chr7.4:35358326-35358345 None:intergenic 40.0%
ACAGTTATAGGGAAGGAAGA+AGG + chr7.4:35360637-35360656 MS.gene78433:CDS 40.0%
ACCTACCTTGAAACCCATTT+GGG - chr7.4:35358763-35358782 None:intergenic 40.0%
AGCAAACTCCATGTTTGGAT+CGG + chr7.4:35358423-35358442 MS.gene78433:intron 40.0%
ATCTTTAGTCCTGGACATGA+GGG - chr7.4:35358282-35358301 None:intergenic 40.0%
ATGATATCAGAGTCTAACCG+TGG - chr7.4:35358050-35358069 None:intergenic 40.0%
ATTATTCACGGGACAGAATG+GGG + chr7.4:35360937-35360956 MS.gene78433:CDS 40.0%
CAATAATCGAGTAATCCGAG+GGG + chr7.4:35358585-35358604 MS.gene78433:intron 40.0%
CAGATTTGTCTTCATGTTGC+TGG + chr7.4:35360276-35360295 MS.gene78433:intron 40.0%
CAGCCTATGAAATATCCGTT+GGG - chr7.4:35358325-35358344 None:intergenic 40.0%
CAGTTATAGGGAAGGAAGAA+GGG + chr7.4:35360638-35360657 MS.gene78433:CDS 40.0%
CATAGTCCAAAAGGACATAG+AGG - chr7.4:35359387-35359406 None:intergenic 40.0%
CATATGGAAGCAAGATGTAG+AGG - chr7.4:35361168-35361187 None:intergenic 40.0%
CCAATAATCGAGTAATCCGA+GGG + chr7.4:35358584-35358603 MS.gene78433:intron 40.0%
CCCTCAATTGCATTTGTCTT+CGG - chr7.4:35361710-35361729 None:intergenic 40.0%
CCGAAGACAAATGCAATTGA+GGG + chr7.4:35361707-35361726 MS.gene78433:CDS 40.0%
CGAAGACAAATGCAATTGAG+GGG + chr7.4:35361708-35361727 MS.gene78433:CDS 40.0%
CGATATTAGTGAACTTGCAG+TGG - chr7.4:35359519-35359538 None:intergenic 40.0%
CTAGGTATCTGTATGGGAAT+TGG + chr7.4:35359413-35359432 MS.gene78433:intron 40.0%
CTCTATTGCTACTAGTAAGC+TGG - chr7.4:35360420-35360439 None:intergenic 40.0%
CTCTTAGCAAACTCCATGTT+TGG + chr7.4:35358418-35358437 MS.gene78433:intron 40.0%
CTGCATGCAAATTGAGTATG+TGG - chr7.4:35361815-35361834 None:intergenic 40.0%
GATAAAGGGATGCTCAATGT+TGG + chr7.4:35358802-35358821 MS.gene78433:intron 40.0%
GCGCTTAACAATGTCATATG+AGG - chr7.4:35362300-35362319 None:intergenic 40.0%
GGAGCTATTGCAATAAGAGA+AGG - chr7.4:35361448-35361467 None:intergenic 40.0%
GTTCAATCATACCTCTGACA+TGG - chr7.4:35361288-35361307 None:intergenic 40.0%
GTTGTGACTAGGTATCTGTA+TGG + chr7.4:35359406-35359425 MS.gene78433:intron 40.0%
TAACAACAGGCTGCAAGAAT+AGG + chr7.4:35359671-35359690 MS.gene78433:intron 40.0%
TATACTCACTGCTGTGCTTT+CGG + chr7.4:35361644-35361663 MS.gene78433:CDS 40.0%
TATTTCAGACTCATGGTGTG+CGG + chr7.4:35359150-35359169 MS.gene78433:intron 40.0%
TCCAATAATCGAGTAATCCG+AGG + chr7.4:35358583-35358602 MS.gene78433:intron 40.0%
TCCGAAGACAAATGCAATTG+AGG + chr7.4:35361706-35361725 MS.gene78433:CDS 40.0%
TCGTATCATCCATCTCAATG+AGG + chr7.4:35359710-35359729 MS.gene78433:intron 40.0%
TTGCAATAAGAGAAGGACCA+AGG - chr7.4:35361441-35361460 None:intergenic 40.0%
! ACCTAACAGCTTGAGTTTTG+GGG - chr7.4:35359811-35359830 None:intergenic 40.0%
! CACCTAACAGCTTGAGTTTT+GGG - chr7.4:35359812-35359831 None:intergenic 40.0%
! GATTTTGCGCCATGAGATAA+TGG - chr7.4:35357494-35357513 None:intergenic 40.0%
! GTACTTCCTCTATGTCCTTT+TGG + chr7.4:35359378-35359397 MS.gene78433:intron 40.0%
! TATGTTGATGCCAGGTATTG+TGG + chr7.4:35362070-35362089 MS.gene78433:intron 40.0%
! TCACCTAACAGCTTGAGTTT+TGG - chr7.4:35359813-35359832 None:intergenic 40.0%
! TCCTAATTGTACTGACCTGA+GGG - chr7.4:35360690-35360709 None:intergenic 40.0%
! TTACGATTAGCTGTTGAACC+TGG + chr7.4:35361254-35361273 MS.gene78433:CDS 40.0%
! TTCCTAATTGTACTGACCTG+AGG - chr7.4:35360691-35360710 None:intergenic 40.0%
!! ACAGTATTAGAAGCGTTTGC+AGG + chr7.4:35361744-35361763 MS.gene78433:CDS 40.0%
!! ATGGAGTTGCTGGTTTGTAT+CGG + chr7.4:35362099-35362118 MS.gene78433:CDS 40.0%
AAACATATGGAGCGCGACAT+GGG + chr7.4:35358019-35358038 MS.gene78433:intron 45.0%
AAATAGCGGCTAAAGGGTAG+CGG - chr7.4:35358952-35358971 None:intergenic 45.0%
AAATATCCGTTGGGCCACTT+TGG - chr7.4:35358316-35358335 None:intergenic 45.0%
ACACTCCAGATCTTTAGTCC+TGG - chr7.4:35358291-35358310 None:intergenic 45.0%
ACGAAACCGCCATTATCTCA+TGG + chr7.4:35357482-35357501 MS.gene78433:CDS 45.0%
AGAAGGTGAGTATGGCGTTA+TGG - chr7.4:35357567-35357586 None:intergenic 45.0%
AGAGGACTTATGTTGATGCC+AGG + chr7.4:35362062-35362081 MS.gene78433:intron 45.0%
AGGGATTAGAGGTTACTGGA+AGG + chr7.4:35360657-35360676 MS.gene78433:CDS 45.0%
ATCAAGCAAAGAGATGGGAG+AGG - chr7.4:35360525-35360544 None:intergenic 45.0%
ATCCCACATGAAAACTCGCT+GGG + chr7.4:35359869-35359888 MS.gene78433:intron 45.0%
ATTTCAGACTCATGGTGTGC+GGG + chr7.4:35359151-35359170 MS.gene78433:intron 45.0%
CACACTTACATGCTATCCTC+TGG + chr7.4:35361677-35361696 MS.gene78433:CDS 45.0%
CAGAGGATAGCATGTAAGTG+TGG - chr7.4:35361679-35361698 None:intergenic 45.0%
CATGTCCAGGACTAAAGATC+TGG + chr7.4:35358283-35358302 MS.gene78433:intron 45.0%
CCCTCGGATTACTCGATTAT+TGG - chr7.4:35358587-35358606 None:intergenic 45.0%
CCTACCTTGAAACCCATTTG+GGG - chr7.4:35358762-35358781 None:intergenic 45.0%
CGGAGAAGGGAATAGGAATT+GGG - chr7.4:35357544-35357563 None:intergenic 45.0%
CTGTATGGGAATTGGGATGT+CGG + chr7.4:35359421-35359440 MS.gene78433:intron 45.0%
GAAAACAGGAACCTGCTGTT+TGG - chr7.4:35362155-35362174 None:intergenic 45.0%
GATCTTTAGTCCTGGACATG+AGG - chr7.4:35358283-35358302 None:intergenic 45.0%
GCATCTTTCTACAAAGGCCT+TGG + chr7.4:35361421-35361440 MS.gene78433:CDS 45.0%
GCTAAGAGTCCTTCTCACAT+TGG - chr7.4:35358406-35358425 None:intergenic 45.0%
GGATGTTTGAGAAGCTGAGA+CGG - chr7.4:35357667-35357686 None:intergenic 45.0%
GGCCATAACAGTTATAGGGA+AGG + chr7.4:35360630-35360649 MS.gene78433:intron 45.0%
GGGATTAGAGGTTACTGGAA+GGG + chr7.4:35360658-35360677 MS.gene78433:CDS 45.0%
TAAACATATGGAGCGCGACA+TGG + chr7.4:35358018-35358037 MS.gene78433:intron 45.0%
TAGCACTCTCCTCATTGAGA+TGG - chr7.4:35359722-35359741 None:intergenic 45.0%
TATCCCACATGAAAACTCGC+TGG + chr7.4:35359868-35359887 MS.gene78433:intron 45.0%
TCCCCAAAACTCAAGCTGTT+AGG + chr7.4:35359807-35359826 MS.gene78433:intron 45.0%
TCCCTCAGGTCAGTACAATT+AGG + chr7.4:35360686-35360705 MS.gene78433:intron 45.0%
TCTGACATGGTTCGATAACC+AGG - chr7.4:35361275-35361294 None:intergenic 45.0%
TCTTTAGTCCTGGACATGAG+GGG - chr7.4:35358281-35358300 None:intergenic 45.0%
TGAAAACCCTACCAAACAGC+AGG + chr7.4:35362141-35362160 MS.gene78433:CDS 45.0%
TGGAGTCTACCAAGAAGGTA+TGG - chr7.4:35360140-35360159 None:intergenic 45.0%
TGGCCCAACGGATATTTCAT+AGG + chr7.4:35358319-35358338 MS.gene78433:intron 45.0%
TGGTTATCGAACCATGTCAG+AGG + chr7.4:35361274-35361293 MS.gene78433:CDS 45.0%
TGTATGGGAATTGGGATGTC+GGG + chr7.4:35359422-35359441 MS.gene78433:intron 45.0%
TTCGTGAAGATGTGCCTGAT+AGG + chr7.4:35361335-35361354 MS.gene78433:intron 45.0%
TTTGCAGGTGAGGATTACTC+CGG + chr7.4:35361759-35361778 MS.gene78433:intron 45.0%
! AATCCCAGCGAGTTTTCATG+TGG - chr7.4:35359875-35359894 None:intergenic 45.0%
! ATAATGGGAGGTAGAGGGAA+TGG + chr7.4:35359979-35359998 MS.gene78433:intron 45.0%
! ATCCCAGCGAGTTTTCATGT+GGG - chr7.4:35359874-35359893 None:intergenic 45.0%
! GAAACTACGCAGCGTTTTGA+TGG + chr7.4:35357952-35357971 MS.gene78433:intron 45.0%
! GATCTGGAGTGTTACCAAAG+TGG + chr7.4:35358299-35358318 MS.gene78433:intron 45.0%
! TAATTGTACTGACCTGAGGG+AGG - chr7.4:35360687-35360706 None:intergenic 45.0%
! TCGGGACACTTTTCTCTTAC+CGG + chr7.4:35359440-35359459 MS.gene78433:intron 45.0%
! TGGTAGGGTTTTCAGAGCAT+TGG - chr7.4:35362135-35362154 None:intergenic 45.0%
! TTTGCGCCATGAGATAATGG+CGG - chr7.4:35357491-35357510 None:intergenic 45.0%
!! AGCTTGCTCTGGCTTTAAAC+GGG - chr7.4:35358640-35358659 None:intergenic 45.0%
!! ATTAGAAGCGTTTGCAGGTG+AGG + chr7.4:35361749-35361768 MS.gene78433:intron 45.0%
!! ATTCCCTCTGGAGCCAATTT+CGG - chr7.4:35358681-35358700 None:intergenic 45.0%
!! CAATGAGGAGAGTGCTATGA+TGG + chr7.4:35359725-35359744 MS.gene78433:intron 45.0%
!! GAGCTTGCTCTGGCTTTAAA+CGG - chr7.4:35358641-35358660 None:intergenic 45.0%
!! GGTAACCCCCAACTACTTTT+TGG + chr7.4:35360854-35360873 MS.gene78433:intron 45.0%
!! GGTAGGGTTTTCAGAGCATT+GGG - chr7.4:35362134-35362153 None:intergenic 45.0%
!! TGGAGTTGCTGGTTTGTATC+GGG + chr7.4:35362100-35362119 MS.gene78433:CDS 45.0%
!!! GCTTGAGTTTTGGGGATGTT+AGG - chr7.4:35359803-35359822 None:intergenic 45.0%
!! TAAATAAATATATAAAAATG+CGG - chr7.4:35357817-35357836 None:intergenic 5.0%
!!! TTTTATATTTTGAAAATAAT+GGG + chr7.4:35359964-35359983 MS.gene78433:intron 5.0%
!!! TTTTTATATTTTGAAAATAA+TGG + chr7.4:35359963-35359982 MS.gene78433:intron 5.0%
AAGATCCCAAGCCAACCACT+AGG + chr7.4:35358732-35358751 MS.gene78433:intron 50.0%
AAGCCAGAGCAAGCTCTGTA+TGG + chr7.4:35358645-35358664 MS.gene78433:intron 50.0%
AATAGCGGCTAAAGGGTAGC+GGG - chr7.4:35358951-35358970 None:intergenic 50.0%
AATGGCGGTTTCGTCGTTGA+AGG - chr7.4:35357476-35357495 None:intergenic 50.0%
ACAAACGCTAATGCAGCGAG+TGG - chr7.4:35357688-35357707 None:intergenic 50.0%
AGGTGAGTATGGCGTTATGG+CGG - chr7.4:35357564-35357583 None:intergenic 50.0%
AGGTTGCCTTGTGCATGCTA+AGG + chr7.4:35361386-35361405 MS.gene78433:intron 50.0%
CCTGCATGAGGAGCTTGATA+CGG - chr7.4:35357786-35357805 None:intergenic 50.0%
CTTTAGTCCTGGACATGAGG+GGG - chr7.4:35358280-35358299 None:intergenic 50.0%
GAATGGGGAGCTATCTGTTG+TGG + chr7.4:35360952-35360971 MS.gene78433:CDS 50.0%
GACGGAGATAGAGGCGAATT+TGG - chr7.4:35357608-35357627 None:intergenic 50.0%
GATGCTGCAGAGAGAAGCAA+GGG - chr7.4:35362270-35362289 None:intergenic 50.0%
GCAGTGGTAAATAACAGCCC+AGG - chr7.4:35359503-35359522 None:intergenic 50.0%
GCGGAGAAGGGAATAGGAAT+TGG - chr7.4:35357545-35357564 None:intergenic 50.0%
GGGAAGGAAGAAGGGATTAG+AGG + chr7.4:35360646-35360665 MS.gene78433:CDS 50.0%
GGTTGCCTTGTGCATGCTAA+GGG + chr7.4:35361387-35361406 MS.gene78433:intron 50.0%
GTGAAACGACGTCGCATTTG+AGG - chr7.4:35357522-35357541 None:intergenic 50.0%
GTGAAGATGTGCCTGATAGG+AGG + chr7.4:35361338-35361357 MS.gene78433:intron 50.0%
GTGTTACCAAAGTGGCCCAA+CGG + chr7.4:35358307-35358326 MS.gene78433:intron 50.0%
GTTGTGGCAAGACTTTCAGC+AGG + chr7.4:35360968-35360987 MS.gene78433:CDS 50.0%
TGATGCTGCAGAGAGAAGCA+AGG - chr7.4:35362271-35362290 None:intergenic 50.0%
TGGACTTAGCCCACCGAAAT+TGG + chr7.4:35358665-35358684 MS.gene78433:intron 50.0%
TTAGCATGCACAAGGCAACC+TGG - chr7.4:35361387-35361406 None:intergenic 50.0%
TTCCTCCCTTAGCATGCACA+AGG - chr7.4:35361395-35361414 None:intergenic 50.0%
TTGAGAAGCTGAGACGGTGT+GGG - chr7.4:35357661-35357680 None:intergenic 50.0%
TTGTGCATGCTAAGGGAGGA+AGG + chr7.4:35361394-35361413 MS.gene78433:CDS 50.0%
TTTGAGAAGCTGAGACGGTG+TGG - chr7.4:35357662-35357681 None:intergenic 50.0%
! AACGACGTCGCATTTGAGGT+TGG - chr7.4:35357518-35357537 None:intergenic 50.0%
! ACAGGAACCTGCTGTTTGGT+AGG - chr7.4:35362151-35362170 None:intergenic 50.0%
! ACGACGTCGCATTTGAGGTT+GGG - chr7.4:35357517-35357536 None:intergenic 50.0%
! ACTCGCTGGGATTTGAAGTG+TGG + chr7.4:35359882-35359901 MS.gene78433:intron 50.0%
! AGTCCATACAGAGCTTGCTC+TGG - chr7.4:35358651-35358670 None:intergenic 50.0%
! ATGGTACTGAGCCTCCTATC+AGG - chr7.4:35361352-35361371 None:intergenic 50.0%
! CAGGAACCTGCTGTTTGGTA+GGG - chr7.4:35362150-35362169 None:intergenic 50.0%
! CCAACCCCAAATGGGTTTCA+AGG + chr7.4:35358755-35358774 MS.gene78433:intron 50.0%
! CCCCAAATGGGTTTCAAGGT+AGG + chr7.4:35358759-35358778 MS.gene78433:intron 50.0%
! CCTTGAAACCCATTTGGGGT+TGG - chr7.4:35358758-35358777 None:intergenic 50.0%
! CTTTCAGCAGGTGCTTTTGC+TGG + chr7.4:35360980-35360999 MS.gene78433:CDS 50.0%
! GGAGGCTCAGTACCATTTTG+TGG + chr7.4:35361356-35361375 MS.gene78433:intron 50.0%
! GTTATGGCGGAGAAGGGAAT+AGG - chr7.4:35357551-35357570 None:intergenic 50.0%
! TATGGCGTTATGGCGGAGAA+GGG - chr7.4:35357557-35357576 None:intergenic 50.0%
! TGATGCCAGGTATTGTGGCA+CGG + chr7.4:35362075-35362094 MS.gene78433:intron 50.0%
!! AGAGGCGAATTTGGTGTCTG+CGG - chr7.4:35357599-35357618 None:intergenic 50.0%
!! GCTTGCTCTGGCTTTAAACG+GGG - chr7.4:35358639-35358658 None:intergenic 50.0%
!! GGAGTTGCTGGTTTGTATCG+GGG + chr7.4:35362101-35362120 MS.gene78433:CDS 50.0%
!! TAGTGGTTGGCTTGGGATCT+TGG - chr7.4:35358733-35358752 None:intergenic 50.0%
!!! GTGAATTTTGGCTTCGGCGA+CGG - chr7.4:35357626-35357645 None:intergenic 50.0%
AATCCCACCGCCCACTTACA+GGG + chr7.4:35358611-35358630 MS.gene78433:intron 55.0%
ACCACTAGGCCAACCCCAAA+TGG + chr7.4:35358746-35358765 MS.gene78433:intron 55.0%
AGGAGCTTGATACGGTCGAG+CGG - chr7.4:35357778-35357797 None:intergenic 55.0%
ATCGAACCTGAGACCTCTGG+AGG + chr7.4:35358699-35358718 MS.gene78433:intron 55.0%
CCACTAGGCCAACCCCAAAT+GGG + chr7.4:35358747-35358766 MS.gene78433:intron 55.0%
CCGTATCAAGCTCCTCATGC+AGG + chr7.4:35357783-35357802 MS.gene78433:CDS 55.0%
GCGAAGAGAGCAGCATCTCT+CGG - chr7.4:35357712-35357731 None:intergenic 55.0%
GGAATCGAACCTGAGACCTC+TGG + chr7.4:35358696-35358715 MS.gene78433:intron 55.0%
GGTGGAGGAGAAGGTGAGTA+TGG - chr7.4:35357575-35357594 None:intergenic 55.0%
GTCTCAGGTTCGATTCCCTC+TGG - chr7.4:35358693-35358712 None:intergenic 55.0%
TATCTCACCCCCTCATGTCC+AGG + chr7.4:35358270-35358289 MS.gene78433:intron 55.0%
TGCCTTGTGCATGCTAAGGG+AGG + chr7.4:35361390-35361409 MS.gene78433:CDS 55.0%
TGTCTTCGGACTGTGTCCAG+AGG - chr7.4:35361696-35361715 None:intergenic 55.0%
TTTGCTCCTCCAGAGGTCTC+AGG - chr7.4:35358708-35358727 None:intergenic 55.0%
! CCACCGAAATTGGCTCCAGA+GGG + chr7.4:35358675-35358694 MS.gene78433:intron 55.0%
! CGACGTCGCATTTGAGGTTG+GGG - chr7.4:35357516-35357535 None:intergenic 55.0%
! CTTGGAGTTTGCTCCTCCAG+AGG - chr7.4:35358715-35358734 None:intergenic 55.0%
! GATGCCAGGTATTGTGGCAC+GGG + chr7.4:35362076-35362095 MS.gene78433:intron 55.0%
! GTATGGCGTTATGGCGGAGA+AGG - chr7.4:35357558-35357577 None:intergenic 55.0%
!! CCTCTGGAGCCAATTTCGGT+GGG - chr7.4:35358677-35358696 None:intergenic 55.0%
!! CGGGCAAGAAAGTGCCAAGA+AGG + chr7.4:35359175-35359194 MS.gene78433:CDS 55.0%
!! GAATTTGGTGTCTGCGGTGG+TGG - chr7.4:35357593-35357612 None:intergenic 55.0%
!! GTTGGCCTAGTGGTTGGCTT+GGG - chr7.4:35358740-35358759 None:intergenic 55.0%
!! TTTGGGGTTGGCCTAGTGGT+TGG - chr7.4:35358746-35358765 None:intergenic 55.0%
AAACGGGGCCCCCTGTAAGT+GGG - chr7.4:35358624-35358643 None:intergenic 60.0%
AGACTCATGGTGTGCGGGTC+GGG + chr7.4:35359156-35359175 MS.gene78433:intron 60.0%
ATCCCACCGCCCACTTACAG+GGG + chr7.4:35358612-35358631 MS.gene78433:intron 60.0%
CAATCCCACCGCCCACTTAC+AGG + chr7.4:35358610-35358629 MS.gene78433:intron 60.0%
CAGACTCATGGTGTGCGGGT+CGG + chr7.4:35359155-35359174 MS.gene78433:intron 60.0%
CCATCCCGTGCCACAATACC+TGG - chr7.4:35362083-35362102 None:intergenic 60.0%
CGCGCACACACACACACACA+TGG + chr7.4:35361996-35362015 MS.gene78433:intron 60.0%
CTGGAAGGGAAACCTCCCTC+AGG + chr7.4:35360672-35360691 MS.gene78433:CDS 60.0%
CTGTAAGTGGGCGGTGGGAT+TGG - chr7.4:35358612-35358631 None:intergenic 60.0%
GAACGTCTTAGCAGCAGCGC+CGG - chr7.4:35357749-35357768 None:intergenic 60.0%
GAGACGGTGTGGGAGCGAAA+TGG - chr7.4:35357651-35357670 None:intergenic 60.0%
TAAACGGGGCCCCCTGTAAG+TGG - chr7.4:35358625-35358644 None:intergenic 60.0%
! CCAGGTATTGTGGCACGGGA+TGG + chr7.4:35362080-35362099 MS.gene78433:intron 60.0%
! CCCACCGAAATTGGCTCCAG+AGG + chr7.4:35358674-35358693 MS.gene78433:intron 60.0%
!! CCCATTTGGGGTTGGCCTAG+TGG - chr7.4:35358750-35358769 None:intergenic 60.0%
!! CCCTCTGGAGCCAATTTCGG+TGG - chr7.4:35358678-35358697 None:intergenic 60.0%
!! GGCGAATTTGGTGTCTGCGG+TGG - chr7.4:35357596-35357615 None:intergenic 60.0%
!! GGTTGGCCTAGTGGTTGGCT+TGG - chr7.4:35358741-35358760 None:intergenic 60.0%
!! TTTGGTGTCTGCGGTGGTGG+AGG - chr7.4:35357590-35357609 None:intergenic 60.0%
GATGCTGCTCTCTTCGCCGC+CGG + chr7.4:35357715-35357734 MS.gene78433:CDS 65.0%
GCGCGACATGGGTGACTCCA+CGG + chr7.4:35358030-35358049 MS.gene78433:intron 65.0%
GCGGTATGCGCACCTGCATG+AGG - chr7.4:35357798-35357817 None:intergenic 65.0%
GGCTTCGGCGACGGAGATAG+AGG - chr7.4:35357617-35357636 None:intergenic 65.0%
GTGGCACGGGATGGAGTTGC+TGG + chr7.4:35362089-35362108 MS.gene78433:CDS 65.0%
TCCCACCGCCCACTTACAGG+GGG + chr7.4:35358613-35358632 MS.gene78433:intron 65.0%
!! GTCTGCGGTGGTGGAGGAGA+AGG - chr7.4:35357584-35357603 None:intergenic 65.0%
GCCCCCTGTAAGTGGGCGGT+GGG - chr7.4:35358617-35358636 None:intergenic 70.0%
! TTCGCCGCCGGAGCATTCGC+CGG + chr7.4:35357727-35357746 MS.gene78433:CDS 70.0%
!! AGCAGCGCCGGCGAATGCTC+CGG - chr7.4:35357737-35357756 None:intergenic 70.0%
!! GGCGGTGGGATTGGTCCCCT+CGG - chr7.4:35358603-35358622 None:intergenic 70.0%
CGGGGCCCCCTGTAAGTGGG+CGG - chr7.4:35358621-35358640 None:intergenic 75.0%
GGCCCCCTGTAAGTGGGCGG+TGG - chr7.4:35358618-35358637 None:intergenic 75.0%
!! AGCGCCGGCGAATGCTCCGG+CGG - chr7.4:35357734-35357753 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 35357469 35362400 35357469 ID=MS.gene78433
chr7.4 mRNA 35357469 35362400 35357469 ID=MS.gene78433.t1;Parent=MS.gene78433
chr7.4 exon 35357469 35357804 35357469 ID=MS.gene78433.t1.exon1;Parent=MS.gene78433.t1
chr7.4 CDS 35357469 35357804 35357469 ID=cds.MS.gene78433.t1;Parent=MS.gene78433.t1
chr7.4 exon 35359158 35359214 35359158 ID=MS.gene78433.t1.exon2;Parent=MS.gene78433.t1
chr7.4 CDS 35359158 35359214 35359158 ID=cds.MS.gene78433.t1;Parent=MS.gene78433.t1
chr7.4 exon 35360631 35360693 35360631 ID=MS.gene78433.t1.exon3;Parent=MS.gene78433.t1
chr7.4 CDS 35360631 35360693 35360631 ID=cds.MS.gene78433.t1;Parent=MS.gene78433.t1
chr7.4 exon 35360798 35360854 35360798 ID=MS.gene78433.t1.exon4;Parent=MS.gene78433.t1
chr7.4 CDS 35360798 35360854 35360798 ID=cds.MS.gene78433.t1;Parent=MS.gene78433.t1
chr7.4 exon 35360935 35361018 35360935 ID=MS.gene78433.t1.exon5;Parent=MS.gene78433.t1
chr7.4 CDS 35360935 35361018 35360935 ID=cds.MS.gene78433.t1;Parent=MS.gene78433.t1
chr7.4 exon 35361227 35361295 35361227 ID=MS.gene78433.t1.exon6;Parent=MS.gene78433.t1
chr7.4 CDS 35361227 35361295 35361227 ID=cds.MS.gene78433.t1;Parent=MS.gene78433.t1
chr7.4 exon 35361388 35361500 35361388 ID=MS.gene78433.t1.exon7;Parent=MS.gene78433.t1
chr7.4 CDS 35361388 35361500 35361388 ID=cds.MS.gene78433.t1;Parent=MS.gene78433.t1
chr7.4 exon 35361596 35361765 35361596 ID=MS.gene78433.t1.exon8;Parent=MS.gene78433.t1
chr7.4 CDS 35361596 35361765 35361596 ID=cds.MS.gene78433.t1;Parent=MS.gene78433.t1
chr7.4 exon 35362084 35362162 35362084 ID=MS.gene78433.t1.exon9;Parent=MS.gene78433.t1
chr7.4 CDS 35362084 35362162 35362084 ID=cds.MS.gene78433.t1;Parent=MS.gene78433.t1
chr7.4 exon 35362286 35362400 35362286 ID=MS.gene78433.t1.exon10;Parent=MS.gene78433.t1
chr7.4 CDS 35362286 35362400 35362286 ID=cds.MS.gene78433.t1;Parent=MS.gene78433.t1
Gene Sequence

>MS.gene78433

ATGTCCTTCAACGACGAAACCGCCATTATCTCATGGCGCAAAATCCCCAACCTCAAATGCGACGTCGTTTCACCCAATTCCTATTCCCTTCTCCGCCATAACGCCATACTCACCTTCTCCTCCACCACCGCAGACACCAAATTCGCCTCTATCTCCGTCGCCGAAGCCAAAATTCACAACCATTTCGCTCCCACACCGTCTCAGCTTCTCAAACATCCACTCGCTGCATTAGCGTTTGTTCCGAGAGATGCTGCTCTCTTCGCCGCCGGAGCATTCGCCGGCGCTGCTGCTAAGACGTTCACTGCTCCGCTCGACCGTATCAAGCTCCTCATGCAGGTGCGCATACCGCATTTTTATATATTTATTTATTTATTTATTTTATTTCTTACAATGAATCTAATAGTAACTAACTAACCGAAACTTGTAACTGTAACTTTTGAATCAGAAACTATAACTAGACTACCTCATAGACAAATTGTAACTGAAACTACGCAGCGTTTTGATGGAGTTTAAAAATTGAGTTCTAAATTGTGAATCTTCAATAGGCTCTAAACATATGGAGCGCGACATGGGTGACTCCACGGTTAGACTCTGATATCATCTTAGAATTTTGGTTGAGCTTAACTCAAACTTATAAAAACCGTTTAGTAAGGTGAGAAATGTTTTCACTTATAAACAATTTTTCTTCGGGTTTTATCTCATTTAATGTGGGACTCCTAACTAACTAAGTGCATGTTTGGATCGACTTAATTTTTGCATGTTTGTAAAATCTTATGTTCTAAATTGCGAGCTTGGAACTCTTATCTCACCCCCTCATGTCCAGGACTAAAGATCTGGAGTGTTACCAAAGTGGCCCAACGGATATTTCATAGGCTGTAAAACCATTTTAGAATTTTGGTTGTACTTAACACATTTTCTATAGGCTTTATCTCATCCAATGTGAGAAGGACTCTTAGCAAACTCCATGTTTGGATCGGCTTAATTTTTGTGTGTTTATAAAAAGCTTATGTTCAAAATGTTACGAGATGTTTAGTAGTTAAATTATTAATCAAACCTTCAAAAACAAGGTAGGTTGTTTTTTTTTTTTTTTTTTTTTTGAAAACTCGGTATCCGATCCAATAATCGAGTAATCCGAGGGGACCAATCCCACCGCCCACTTACAGGGGGCCCCGTTTAAAGCCAGAGCAAGCTCTGTATGGACTTAGCCCACCGAAATTGGCTCCAGAGGGAATCGAACCTGAGACCTCTGGAGGAGCAAACTCCAAGATCCCAAGCCAACCACTAGGCCAACCCCAAATGGGTTTCAAGGTAGGTTATTTTAATCTTTGTCTTTGATAAAGGGATGCTCAATGTTGGAAACAATGTAGCCAATCACAGATAGCAGAAAATAGTTGTTTGTTCAAAATGTGCAATAGCTGCTATTTGACAACAGATTCTACTAAATAGTGTATCACAAAGTAATTGTGATCTGTTCAAATTCCCGCTACCCTTTAGCCGCTATTTGACAATACTGATTGGAAATAGGAAATAAAATGAAAATAAGATGGTATTTTTGTACTTTTAGATTATAAAATGTCAATTGAAAATGAAAATAGAAAAAAGGAAGTAAACACTCTCATAATCTTAATGTTGTAGTGACAATTTTAATTTATGAAACACAAAAACTTACTGTCACACAATGTATTTCAGACTCATGGTGTGCGGGTCGGGCAAGAAAGTGCCAAGAAGGCAATAAGTTTTGTTGAGGTAATATTTGATCCTTTTCGTTGTTTCCTTCCTAACTTTTAAGTGTTGATTGGTTTTATAATTTAATCTTCCTGTTGTACCAATCCAAATGTTTACGAATATGTTGTAGGAGTGTAAGTTGATTACTTGATTGATATGTGATATATAATGTTATTCTGCTTCTGTACTTCCTCTATGTCCTTTTGGACTATGTTGTGACTAGGTATCTGTATGGGAATTGGGATGTCGGGACACTTTTCTCTTACCGGAGATGATATTGTCATATGAACAAGTATTATGCTACTACCTGGGCTGTTATTTACCACTGCAAGTTCACTAATATCGCAATGATCTATATGGGTTGAAATAAAAAAGTTTTTAGTTGATAATCTTGGAATGATAGAGATGAGTTTATGATTCTTATCCAATTTCATTGATGTCAAAAAGTAGGCTTTTCTAAATTGATTGGGATAACAATAACAACAGGCTGCAAGAATAGGTCCTTGTCTCTTTGAATCGTATCATCCATCTCAATGAGGAGAGTGCTATGATGGAATTCTTGATTTTAAGGGCGATTATTCCATTTAACTGCTAGCTTTTTCATGACCTAACATCCCCAAAACTCAAGCTGTTAGGTGAAGACACATGACATGAATGCTTTTATTTCTAGCATCTATCCCACATGAAAACTCGCTGGGATTTGAAGTGTGGACAGTGCACAGCTCTGATGCAACCAACCTTGTTTTAAACTTCAACAGTTCAACTTTATTTTTTATATTTTGAAAATAATGGGAGGTAGAGGGAATGGTTTCTATATCACTTATCCCAAAAGCTTAAATTTTTGGGTGAAACATCGATGGTTTTTATATTTAACAACATTGAAGAAAAATAAATTAAAGGCGATGTAGCTAAGAATGGATTTGAAGTGGTATGTTGATAAGATCCATACCTTCTTGGTAGACTCCATTGTTTCAACTAATATTGCATTTGTATATACTATCATGAAAATACATTTTTTTTTCTTCAGTTAACTGACAGCAGAAAAAGGTGCTTTCATTATAGTTGTGTTTATAAATGCTTTACAGATTTGTCTTCATGTTGCTGGTTAGTAATTGGTATTTACGGACTTGGTTAGAGTTAGACTATTTTCTTTCGATAGTGCTGGTTTATAATTGTAGCCATCTTGTAGAAGGGAATTTAGCCAAGCTGCATATAAAAAACAGCCAGCTTACTAGTAGCAATAGAGTGTTACTTTCATTCAACTACTTACTGTTTGTAAGGATTTGTATTCGGACATCACGTATTAATTACTAGTTTTAGTTTATTGGCCTCTCCCATCTCTTTGCTTGATGATCTTGACTCATTTCCTTTTTGGATGTACTAAGCTCTGATGAAATGTTTTTAAATTTTCTTTGATCACATGAAAATAAAATACAGGCCATAACAGTTATAGGGAAGGAAGAAGGGATTAGAGGTTACTGGAAGGGAAACCTCCCTCAGGTCAGTACAATTAGGAAAAAAATGTATTCGTATTTCTTGATTTATGTTTCCGTATAAACATTGACTAGTGTTTTCATTTTAGAGCTTCTTTTTTAATGTTACAGGTGATTCGAGTTATACCTTATAGTGCCGTTCAGCTTTTTGCTTATGAATTTTATAAGGTAACCCCCAACTACTTTTTGGAAGTTCTAGTAGTAAATATTATCTGTTCATGTTTGAAGTTCTATTTTTGGATTTACAGAAATTATTCACGGGACAGAATGGGGAGCTATCTGTTGTGGCAAGACTTTCAGCAGGTGCTTTTGCTGGCATGACATCCACTTTTGTAAGTAAATAATCAGAAGTCCTTTGCCTTTGTTGTTTCATAGGTTTGCTTCTTATTGTGTTTAATATTGTAGGTATTTTAATAATTTTACATAACATAGTTAATACATATTAACAATTTCTTTTATTTAAAACAATCTTTTGTTTCCTCTACATCTTGCTTCCATATGTATCTAATTTTTTATTTTTATTCTTTTATATCCTTGTAGATAACTTACCCATTAGATGTTCTGAGATTACGATTAGCTGTTGAACCTGGTTATCGAACCATGTCAGAGGTATGATTGAACTGATTTAGCAATTCAGCAAGATCGTTGTTCGTGAAGATGTGCCTGATAGGAGGCTCAGTACCATTTTGTGGTTTTTCCAGGTTGCCTTGTGCATGCTAAGGGAGGAAGGATTTGCATCTTTCTACAAAGGCCTTGGTCCTTCTCTTATTGCAATAGCTCCTTACATTGCAGTTAATTTTTGTGTTTTTGACTTGTAAGTTCATTAATAATCTTGTATTTTTTAGTAATTTTGTGGGAGAATGGACTTGAACATTGAAATTGAGAATCCTTACCTTTTATGGGTGATAGATTAAAGAAGTCATTGCCTGAGAAGTATCAAAAGAGAACTGAGACATCTATACTCACTGCTGTGCTTTCGGCATCTCTAGCCACACTTACATGCTATCCTCTGGACACAGTCCGAAGACAAATGCAATTGAGGGGTACACCTTATACAACAGTATTAGAAGCGTTTGCAGGTGAGGATTACTCCGGTTTACTTTTTAGCGTCAGAAATTTATATTGCCACATACTCAATTTGCATGCAGTTATTTTTTTAACATAAGAAATATATAAAAAAAATGTATTAAAGAATCTGGCTCGTGTGTTGTGATATTGTTTCTAAATTCACGCTCTTTTCCTGTCAAAATAAATAAAATCATGCTAGTCATGGTTGCAATATAATGATATTAGTATCTGTGCGCGCGTGCGCGCACACACACACACACATGGAGCTATCTGAATTATTTTATTGTAAGGGAGAATTGTTTATTATAGAGGACTTATGTTGATGCCAGGTATTGTGGCACGGGATGGAGTTGCTGGTTTGTATCGGGGATTTGTGCCCAATGCTCTGAAAACCCTACCAAACAGCAGGTTCCTGTTTTCTCCTATTGTTTATAAAAATAAGATCATGATGTCAACTGTGCTAGCTTTTTGCTACATTTTTATGCTTTCTTGGCATTAGTTTTCTATACTCACCCTTGCTTCTCTCTGCAGCATCAAGCTTACCTCATATGACATTGTTAAGCGCATAATTGCAGCTAGTGAGAAAGAATTTCAAACAATTACAGAGGAAAACCGCAACAAACAAAAAAACGTCAACAATCAATGA
Protein sequence

>MS.gene78433.t1

MSFNDETAIISWRKIPNLKCDVVSPNSYSLLRHNAILTFSSTTADTKFASISVAEAKIHNHFAPTPSQLLKHPLAALAFVPRDAALFAAGAFAGAAAKTFTAPLDRIKLLMQTHGVRVGQESAKKAISFVEAITVIGKEEGIRGYWKGNLPQVIRVIPYSAVQLFAYEFYKKLFTGQNGELSVVARLSAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEVALCMLREEGFASFYKGLGPSLIAIAPYIAVNFCVFDLLKKSLPEKYQKRTETSILTAVLSASLATLTCYPLDTVRRQMQLRGTPYTTVLEAFAGIVARDGVAGLYRGFVPNALKTLPNSSIKLTSYDIVKRIIAASEKEFQTITEENRNKQKNVNNQ