Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057845.t1 | RHN58849.1 | 97.6 | 380 | 9 | 0 | 1 | 380 | 1 | 380 | 6.70E-203 | 716.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057845.t1 | Q9M024 | 78.7 | 314 | 67 | 0 | 62 | 375 | 92 | 405 | 3.3e-142 | 506.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057845.t1 | A0A396HZU9 | 97.6 | 380 | 9 | 0 | 1 | 380 | 1 | 380 | 4.8e-203 | 716.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049351 | MS.gene057845 | 0.818165 | 2.26E-52 | -1.69E-46 |
MS.gene052615 | MS.gene057845 | 0.801945 | 7.08E-49 | -1.69E-46 |
MS.gene052982 | MS.gene057845 | 0.817416 | 3.34E-52 | -1.69E-46 |
MS.gene056452 | MS.gene057845 | 0.830385 | 3.03E-55 | -1.69E-46 |
MS.gene057048 | MS.gene057845 | 0.813464 | 2.53E-51 | -1.69E-46 |
MS.gene057845 | MS.gene058233 | 0.802944 | 4.41E-49 | -1.69E-46 |
MS.gene057845 | MS.gene058660 | 0.800989 | 1.11E-48 | -1.69E-46 |
MS.gene057845 | MS.gene06470 | 0.813731 | 2.21E-51 | -1.69E-46 |
MS.gene057845 | MS.gene065840 | 0.837545 | 4.88E-57 | -1.69E-46 |
MS.gene057845 | MS.gene065841 | 0.830817 | 2.37E-55 | -1.69E-46 |
MS.gene057845 | MS.gene067796 | 0.817031 | 4.07E-52 | -1.69E-46 |
MS.gene057845 | MS.gene070108 | 0.806911 | 6.54E-50 | -1.69E-46 |
MS.gene057845 | MS.gene072665 | 0.809985 | 1.44E-50 | -1.69E-46 |
MS.gene057845 | MS.gene073090 | 0.803385 | 3.58E-49 | -1.69E-46 |
MS.gene057845 | MS.gene073310 | 0.805268 | 1.45E-49 | -1.69E-46 |
MS.gene057845 | MS.gene07366 | 0.831075 | 2.05E-55 | -1.69E-46 |
MS.gene057845 | MS.gene20225 | 0.810983 | 8.79E-51 | -1.69E-46 |
MS.gene057845 | MS.gene20910 | 0.821056 | 4.94E-53 | -1.69E-46 |
MS.gene057845 | MS.gene23274 | 0.802479 | 5.50E-49 | -1.69E-46 |
MS.gene057845 | MS.gene25114 | -0.806047 | 9.95E-50 | -1.69E-46 |
MS.gene057845 | MS.gene28847 | 0.801859 | 7.38E-49 | -1.69E-46 |
MS.gene057845 | MS.gene29833 | 0.835406 | 1.71E-56 | -1.69E-46 |
MS.gene057845 | MS.gene31030 | 0.801151 | 1.03E-48 | -1.69E-46 |
MS.gene057845 | MS.gene33475 | 0.823665 | 1.23E-53 | -1.69E-46 |
MS.gene057845 | MS.gene33769 | 0.809801 | 1.58E-50 | -1.69E-46 |
MS.gene057845 | MS.gene37276 | 0.805672 | 1.19E-49 | -1.69E-46 |
MS.gene057845 | MS.gene37584 | 0.812885 | 3.38E-51 | -1.69E-46 |
MS.gene057845 | MS.gene38985 | 0.826041 | 3.37E-54 | -1.69E-46 |
MS.gene057845 | MS.gene44033 | 0.811713 | 6.10E-51 | -1.69E-46 |
MS.gene057845 | MS.gene48593 | 0.81593 | 7.18E-52 | -1.69E-46 |
MS.gene057845 | MS.gene51070 | 0.810036 | 1.41E-50 | -1.69E-46 |
MS.gene057845 | MS.gene58499 | 0.808605 | 2.85E-50 | -1.69E-46 |
MS.gene057845 | MS.gene58501 | 0.802677 | 5.01E-49 | -1.69E-46 |
MS.gene057845 | MS.gene60909 | 0.806856 | 6.71E-50 | -1.69E-46 |
MS.gene057845 | MS.gene60911 | 0.814462 | 1.52E-51 | -1.69E-46 |
MS.gene057845 | MS.gene65588 | 0.809956 | 1.46E-50 | -1.69E-46 |
MS.gene057845 | MS.gene67875 | 0.809022 | 2.32E-50 | -1.69E-46 |
MS.gene057845 | MS.gene72131 | 0.801012 | 1.10E-48 | -1.69E-46 |
MS.gene057845 | MS.gene76425 | 0.807192 | 5.70E-50 | -1.69E-46 |
MS.gene057845 | MS.gene86306 | 0.81787 | 2.64E-52 | -1.69E-46 |
MS.gene057845 | MS.gene87268 | 0.809356 | 1.97E-50 | -1.69E-46 |
MS.gene057845 | MS.gene89914 | 0.822021 | 2.96E-53 | -1.69E-46 |
MS.gene057845 | MS.gene90287 | 0.812648 | 3.81E-51 | -1.69E-46 |
MS.gene057845 | MS.gene91314 | 0.817827 | 2.69E-52 | -1.69E-46 |
MS.gene057845 | MS.gene91483 | 0.81759 | 3.05E-52 | -1.69E-46 |
MS.gene057845 | MS.gene92871 | 0.814238 | 1.71E-51 | -1.69E-46 |
MS.gene057845 | MS.gene93689 | 0.813307 | 2.74E-51 | -1.69E-46 |
MS.gene057845 | MS.gene96252 | 0.814381 | 1.59E-51 | -1.69E-46 |
MS.gene057845 | MS.gene96348 | 0.809888 | 1.51E-50 | -1.69E-46 |
MS.gene057845 | MS.gene96697 | 0.817225 | 3.68E-52 | -1.69E-46 |
MS.gene057845 | MS.gene97266 | 0.800467 | 1.42E-48 | -1.69E-46 |
MS.gene057845 | MS.gene97940 | 0.817334 | 3.48E-52 | -1.69E-46 |
MS.gene057845 | MS.gene99819 | 0.813571 | 2.39E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene057845 | MS.gene79071 | PPI |
MS.gene057845 | MS.gene002926 | PPI |
MS.gene057845 | MS.gene057771 | PPI |
MS.gene057845 | MS.gene66388 | PPI |
MS.gene057845 | MS.gene82276 | PPI |
MS.gene057845 | MS.gene049051 | PPI |
MS.gene057845 | MS.gene015841 | PPI |
MS.gene057845 | MS.gene20137 | PPI |
MS.gene057845 | MS.gene45142 | PPI |
MS.gene057845 | MS.gene60471 | PPI |
MS.gene057845 | MS.gene063343 | PPI |
MS.gene057845 | MS.gene016690 | PPI |
MS.gene057845 | MS.gene049052 | PPI |
MS.gene057845 | MS.gene75024 | PPI |
MS.gene057845 | MS.gene23588 | PPI |
MS.gene057845 | MS.gene030337 | PPI |
MS.gene057845 | MS.gene58600 | PPI |
MS.gene057845 | MS.gene46786 | PPI |
MS.gene01884 | MS.gene057845 | PPI |
MS.gene057845 | MS.gene047966 | PPI |
MS.gene057845 | MS.gene027518 | PPI |
MS.gene057845 | MS.gene00843 | PPI |
MS.gene057845 | MS.gene001242 | PPI |
MS.gene057845 | MS.gene062996 | PPI |
MS.gene057845 | MS.gene003568 | PPI |
MS.gene057845 | MS.gene05967 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057845.t1 | MTR_4g016730 | 91.990 | 387 | 14 | 2 | 1 | 380 | 1 | 377 | 0.0 | 668 |
MS.gene057845.t1 | MTR_7g068340 | 77.368 | 380 | 78 | 3 | 1 | 377 | 1 | 375 | 0.0 | 579 |
MS.gene057845.t1 | MTR_4g114320 | 35.915 | 284 | 164 | 7 | 89 | 362 | 123 | 398 | 6.91e-52 | 178 |
MS.gene057845.t1 | MTR_4g114320 | 30.857 | 175 | 114 | 4 | 188 | 356 | 122 | 295 | 2.67e-15 | 77.0 |
MS.gene057845.t1 | MTR_7g064980 | 34.237 | 295 | 174 | 7 | 90 | 364 | 26 | 320 | 7.81e-49 | 167 |
MS.gene057845.t1 | MTR_1g012030 | 35.915 | 284 | 156 | 7 | 89 | 358 | 139 | 410 | 1.05e-47 | 167 |
MS.gene057845.t1 | MTR_1g012030 | 27.011 | 174 | 123 | 1 | 188 | 357 | 138 | 311 | 2.15e-16 | 80.5 |
MS.gene057845.t1 | MTR_3g107510 | 35.315 | 286 | 163 | 8 | 91 | 364 | 124 | 399 | 3.97e-47 | 165 |
MS.gene057845.t1 | MTR_3g107510 | 32.461 | 191 | 108 | 5 | 87 | 267 | 214 | 393 | 1.00e-17 | 84.3 |
MS.gene057845.t1 | MTR_3g107510 | 26.842 | 190 | 130 | 3 | 188 | 368 | 121 | 310 | 6.45e-16 | 79.0 |
MS.gene057845.t1 | MTR_8g027975 | 31.731 | 312 | 164 | 7 | 89 | 359 | 51 | 354 | 1.76e-45 | 160 |
MS.gene057845.t1 | MTR_5g009500 | 32.573 | 307 | 166 | 6 | 89 | 359 | 38 | 339 | 4.11e-45 | 159 |
MS.gene057845.t1 | MTR_3g104600 | 32.698 | 315 | 173 | 6 | 82 | 364 | 28 | 335 | 2.28e-44 | 157 |
MS.gene057845.t1 | MTR_3g104600 | 26.190 | 210 | 133 | 4 | 89 | 277 | 131 | 339 | 1.27e-15 | 77.8 |
MS.gene057845.t1 | MTR_3g098460 | 31.250 | 304 | 176 | 8 | 76 | 356 | 185 | 478 | 2.38e-43 | 157 |
MS.gene057845.t1 | MTR_3g098460 | 31.053 | 190 | 118 | 3 | 86 | 267 | 296 | 480 | 1.01e-19 | 90.9 |
MS.gene057845.t1 | MTR_6g091800 | 30.675 | 326 | 167 | 7 | 65 | 355 | 2 | 303 | 6.98e-42 | 149 |
MS.gene057845.t1 | MTR_8g096050 | 31.818 | 286 | 165 | 7 | 89 | 356 | 227 | 500 | 6.57e-41 | 151 |
MS.gene057845.t1 | MTR_8g096050 | 31.053 | 190 | 118 | 3 | 86 | 267 | 318 | 502 | 1.06e-20 | 94.0 |
MS.gene057845.t1 | MTR_2g436930 | 29.703 | 303 | 173 | 7 | 91 | 353 | 17 | 319 | 3.43e-40 | 145 |
MS.gene057845.t1 | MTR_2g436930 | 27.751 | 209 | 125 | 5 | 190 | 372 | 16 | 224 | 3.78e-16 | 79.0 |
MS.gene057845.t1 | MTR_2g436930 | 25.000 | 204 | 121 | 4 | 89 | 267 | 128 | 324 | 9.89e-14 | 72.0 |
MS.gene057845.t1 | MTR_5g081150 | 34.828 | 290 | 169 | 7 | 89 | 359 | 34 | 322 | 3.72e-39 | 142 |
MS.gene057845.t1 | MTR_5g081150 | 30.890 | 191 | 114 | 6 | 89 | 269 | 141 | 323 | 3.71e-11 | 64.3 |
MS.gene057845.t1 | MTR_4g119770 | 28.387 | 310 | 180 | 7 | 91 | 358 | 16 | 325 | 2.07e-38 | 140 |
MS.gene057845.t1 | MTR_4g119770 | 28.774 | 212 | 122 | 6 | 190 | 372 | 15 | 226 | 4.45e-18 | 84.7 |
MS.gene057845.t1 | MTR_4g119770 | 26.214 | 206 | 116 | 6 | 89 | 267 | 129 | 325 | 4.41e-14 | 72.8 |
MS.gene057845.t1 | MTR_6g091800 | 28.571 | 350 | 167 | 7 | 65 | 355 | 2 | 327 | 2.40e-38 | 140 |
MS.gene057845.t1 | MTR_6g091800 | 26.897 | 145 | 98 | 2 | 130 | 267 | 187 | 330 | 2.38e-12 | 67.8 |
MS.gene057845.t1 | MTR_7g084400 | 32.632 | 285 | 161 | 10 | 89 | 356 | 213 | 483 | 8.88e-38 | 142 |
MS.gene057845.t1 | MTR_7g084400 | 30.769 | 182 | 118 | 2 | 89 | 267 | 309 | 485 | 1.24e-22 | 99.4 |
MS.gene057845.t1 | MTR_7g084400 | 26.404 | 178 | 122 | 3 | 189 | 357 | 213 | 390 | 2.24e-11 | 65.5 |
MS.gene057845.t1 | MTR_6g091800 | 30.943 | 265 | 140 | 5 | 65 | 305 | 2 | 247 | 8.28e-37 | 134 |
MS.gene057845.t1 | MTR_6g091800 | 25.000 | 200 | 123 | 5 | 189 | 364 | 19 | 215 | 4.88e-11 | 63.2 |
MS.gene057845.t1 | MTR_6g091800 | 30.943 | 265 | 140 | 5 | 65 | 305 | 2 | 247 | 1.14e-36 | 134 |
MS.gene057845.t1 | MTR_6g091800 | 25.000 | 200 | 123 | 5 | 189 | 364 | 19 | 215 | 8.07e-11 | 62.8 |
MS.gene057845.t1 | MTR_3g104500 | 32.646 | 291 | 172 | 8 | 89 | 358 | 34 | 321 | 1.43e-36 | 135 |
MS.gene057845.t1 | MTR_3g074490 | 35.034 | 294 | 151 | 9 | 91 | 355 | 118 | 400 | 1.68e-34 | 132 |
MS.gene057845.t1 | MTR_3g074490 | 27.083 | 192 | 134 | 3 | 188 | 374 | 115 | 305 | 2.26e-14 | 74.3 |
MS.gene057845.t1 | MTR_6g091800 | 28.144 | 334 | 157 | 7 | 65 | 339 | 2 | 311 | 8.74e-34 | 127 |
MS.gene057845.t1 | MTR_6g091800 | 28.374 | 289 | 140 | 5 | 65 | 305 | 2 | 271 | 2.88e-33 | 125 |
MS.gene057845.t1 | MTR_6g091800 | 28.374 | 289 | 140 | 5 | 65 | 305 | 2 | 271 | 3.13e-33 | 125 |
MS.gene057845.t1 | MTR_8g090210 | 33.220 | 295 | 155 | 11 | 91 | 355 | 112 | 394 | 1.93e-31 | 123 |
MS.gene057845.t1 | MTR_8g090210 | 27.907 | 172 | 120 | 2 | 188 | 355 | 109 | 280 | 5.45e-13 | 70.1 |
MS.gene057845.t1 | MTR_8g107270 | 30.070 | 286 | 176 | 10 | 94 | 357 | 20 | 303 | 5.32e-31 | 120 |
MS.gene057845.t1 | MTR_4g119770 | 30.204 | 245 | 142 | 6 | 91 | 306 | 16 | 260 | 1.26e-30 | 118 |
MS.gene057845.t1 | MTR_4g119770 | 28.774 | 212 | 122 | 6 | 190 | 372 | 15 | 226 | 2.17e-18 | 84.3 |
MS.gene057845.t1 | MTR_6g092210 | 29.615 | 260 | 143 | 5 | 134 | 364 | 4 | 252 | 6.12e-30 | 116 |
MS.gene057845.t1 | MTR_6g092210 | 24.599 | 187 | 132 | 3 | 89 | 267 | 61 | 246 | 6.69e-13 | 68.6 |
MS.gene057845.t1 | MTR_6g034145 | 28.571 | 266 | 144 | 5 | 134 | 364 | 4 | 258 | 7.61e-30 | 115 |
MS.gene057845.t1 | MTR_6g034145 | 26.531 | 196 | 123 | 6 | 89 | 267 | 61 | 252 | 1.71e-13 | 70.5 |
MS.gene057845.t1 | MTR_5g081150 | 37.968 | 187 | 104 | 4 | 89 | 264 | 34 | 219 | 1.02e-27 | 110 |
MS.gene057845.t1 | MTR_5g081150 | 37.968 | 187 | 104 | 4 | 89 | 264 | 34 | 219 | 1.53e-27 | 109 |
MS.gene057845.t1 | MTR_4g005330 | 26.936 | 297 | 181 | 7 | 89 | 358 | 66 | 353 | 2.01e-27 | 111 |
MS.gene057845.t1 | MTR_4g005330 | 25.521 | 192 | 122 | 2 | 186 | 356 | 63 | 254 | 2.54e-14 | 73.9 |
MS.gene057845.t1 | MTR_7g109135 | 30.345 | 290 | 177 | 10 | 91 | 360 | 24 | 308 | 5.57e-27 | 109 |
MS.gene057845.t1 | MTR_7g109135 | 28.571 | 189 | 118 | 5 | 190 | 362 | 23 | 210 | 9.89e-15 | 74.7 |
MS.gene057845.t1 | MTR_7g109135 | 28.729 | 181 | 110 | 6 | 103 | 271 | 137 | 310 | 3.04e-11 | 64.3 |
MS.gene057845.t1 | MTR_7g109135 | 29.682 | 283 | 181 | 8 | 91 | 360 | 24 | 301 | 6.32e-27 | 109 |
MS.gene057845.t1 | MTR_7g109135 | 28.804 | 184 | 117 | 5 | 190 | 362 | 23 | 203 | 4.34e-13 | 69.7 |
MS.gene057845.t1 | MTR_4g005330 | 26.689 | 296 | 181 | 7 | 90 | 358 | 1 | 287 | 1.31e-26 | 108 |
MS.gene057845.t1 | MTR_8g036880 | 31.894 | 301 | 179 | 9 | 75 | 352 | 86 | 383 | 4.21e-26 | 108 |
MS.gene057845.t1 | MTR_3g028590 | 31.724 | 290 | 175 | 9 | 89 | 358 | 97 | 383 | 1.39e-25 | 107 |
MS.gene057845.t1 | MTR_3g028590 | 31.724 | 290 | 175 | 9 | 89 | 358 | 93 | 379 | 1.58e-25 | 106 |
MS.gene057845.t1 | MTR_7g084400 | 31.364 | 220 | 123 | 8 | 89 | 293 | 207 | 413 | 2.22e-24 | 103 |
MS.gene057845.t1 | MTR_7g084400 | 26.404 | 178 | 122 | 3 | 189 | 357 | 207 | 384 | 2.01e-11 | 65.5 |
MS.gene057845.t1 | MTR_4g078545 | 32.746 | 284 | 168 | 9 | 89 | 352 | 75 | 355 | 2.37e-24 | 103 |
MS.gene057845.t1 | MTR_1g087840 | 29.181 | 281 | 172 | 11 | 101 | 360 | 31 | 305 | 4.82e-24 | 101 |
MS.gene057845.t1 | MTR_2g098070 | 31.724 | 290 | 175 | 9 | 89 | 358 | 66 | 352 | 2.07e-22 | 97.4 |
MS.gene057845.t1 | MTR_4g018750 | 24.742 | 291 | 196 | 7 | 89 | 365 | 15 | 296 | 3.64e-22 | 95.9 |
MS.gene057845.t1 | MTR_5g055410 | 26.599 | 297 | 187 | 8 | 101 | 377 | 33 | 318 | 5.14e-22 | 96.3 |
MS.gene057845.t1 | MTR_7g066690 | 24.055 | 291 | 198 | 7 | 89 | 365 | 17 | 298 | 5.51e-22 | 95.5 |
MS.gene057845.t1 | MTR_7g066690 | 25.000 | 200 | 129 | 3 | 180 | 358 | 8 | 207 | 2.40e-11 | 64.3 |
MS.gene057845.t1 | MTR_2g436930 | 26.754 | 228 | 135 | 5 | 158 | 353 | 2 | 229 | 7.36e-22 | 93.6 |
MS.gene057845.t1 | MTR_2g436930 | 25.000 | 204 | 121 | 4 | 89 | 267 | 38 | 234 | 5.44e-14 | 71.2 |
MS.gene057845.t1 | MTR_6g091800 | 32.919 | 161 | 81 | 4 | 64 | 216 | 1 | 142 | 2.92e-21 | 90.5 |
MS.gene057845.t1 | MTR_6g091800 | 33.125 | 160 | 80 | 4 | 65 | 216 | 2 | 142 | 3.32e-21 | 91.3 |
MS.gene057845.t1 | MTR_8g076760 | 27.465 | 284 | 178 | 9 | 105 | 363 | 30 | 310 | 1.34e-20 | 91.7 |
MS.gene057845.t1 | MTR_5g073040 | 26.855 | 283 | 189 | 6 | 88 | 358 | 38 | 314 | 3.53e-20 | 90.9 |
MS.gene057845.t1 | MTR_6g091910 | 28.767 | 219 | 128 | 8 | 65 | 267 | 2 | 208 | 3.33e-19 | 85.9 |
MS.gene057845.t1 | MTR_6g091910 | 27.128 | 188 | 117 | 2 | 188 | 355 | 18 | 205 | 3.83e-16 | 77.0 |
MS.gene057845.t1 | MTR_8g098240 | 26.071 | 280 | 185 | 7 | 90 | 359 | 321 | 588 | 6.68e-19 | 89.0 |
MS.gene057845.t1 | MTR_8g098240 | 26.842 | 190 | 120 | 7 | 191 | 368 | 322 | 504 | 1.06e-12 | 69.7 |
MS.gene057845.t1 | MTR_3g025800 | 25.000 | 308 | 183 | 9 | 89 | 355 | 28 | 328 | 5.00e-18 | 84.7 |
MS.gene057845.t1 | MTR_7g109135 | 30.043 | 233 | 139 | 9 | 148 | 360 | 2 | 230 | 6.85e-18 | 82.4 |
MS.gene057845.t1 | MTR_7g109135 | 28.729 | 181 | 110 | 6 | 103 | 271 | 59 | 232 | 2.73e-11 | 63.5 |
MS.gene057845.t1 | MTR_1g097890 | 24.038 | 312 | 205 | 8 | 55 | 359 | 19 | 305 | 2.25e-17 | 82.4 |
MS.gene057845.t1 | MTR_1g097890 | 28.638 | 213 | 132 | 6 | 64 | 271 | 111 | 308 | 1.27e-13 | 71.2 |
MS.gene057845.t1 | MTR_8g092080 | 23.913 | 276 | 182 | 6 | 90 | 359 | 53 | 306 | 3.47e-17 | 82.0 |
MS.gene057845.t1 | MTR_8g092080 | 29.255 | 188 | 111 | 5 | 91 | 270 | 135 | 308 | 9.50e-15 | 74.7 |
MS.gene057845.t1 | MTR_4g018750 | 24.400 | 250 | 174 | 6 | 89 | 324 | 15 | 263 | 2.07e-16 | 79.3 |
MS.gene057845.t1 | MTR_4g057850 | 22.373 | 295 | 200 | 8 | 90 | 365 | 23 | 307 | 2.38e-16 | 79.3 |
MS.gene057845.t1 | MTR_3g462140 | 24.476 | 286 | 198 | 8 | 89 | 358 | 15 | 298 | 6.50e-16 | 77.8 |
MS.gene057845.t1 | MTR_1g088995 | 25.839 | 298 | 177 | 10 | 54 | 332 | 9 | 281 | 1.04e-15 | 77.4 |
MS.gene057845.t1 | MTR_3g100570 | 24.262 | 305 | 196 | 7 | 89 | 358 | 6 | 310 | 4.13e-15 | 75.9 |
MS.gene057845.t1 | MTR_3g100570 | 28.125 | 192 | 120 | 6 | 91 | 269 | 126 | 312 | 1.56e-11 | 65.1 |
MS.gene057845.t1 | MTR_5g030530 | 25.517 | 290 | 193 | 8 | 91 | 359 | 10 | 297 | 5.71e-15 | 75.1 |
MS.gene057845.t1 | MTR_5g030530 | 25.837 | 209 | 141 | 4 | 69 | 267 | 92 | 296 | 1.30e-12 | 68.2 |
MS.gene057845.t1 | MTR_7g109135 | 30.189 | 212 | 124 | 9 | 169 | 360 | 2 | 209 | 7.06e-15 | 73.6 |
MS.gene057845.t1 | MTR_7g109135 | 28.729 | 181 | 110 | 6 | 103 | 271 | 38 | 211 | 1.57e-11 | 63.9 |
MS.gene057845.t1 | MTR_1g090330 | 20.069 | 289 | 205 | 6 | 93 | 361 | 18 | 300 | 2.11e-14 | 73.6 |
MS.gene057845.t1 | MTR_1g090330 | 25.000 | 184 | 130 | 3 | 90 | 265 | 112 | 295 | 1.08e-12 | 68.6 |
MS.gene057845.t1 | MTR_8g066975 | 30.159 | 189 | 122 | 3 | 89 | 267 | 108 | 296 | 2.97e-14 | 73.2 |
MS.gene057845.t1 | MTR_8g066975 | 25.743 | 303 | 191 | 11 | 82 | 359 | 4 | 297 | 1.53e-13 | 70.9 |
MS.gene057845.t1 | MTR_8g019480 | 27.083 | 192 | 113 | 4 | 189 | 358 | 35 | 221 | 6.15e-14 | 72.8 |
MS.gene057845.t1 | MTR_6g034515 | 25.836 | 329 | 207 | 10 | 28 | 340 | 16 | 323 | 9.12e-13 | 69.3 |
MS.gene057845.t1 | MTR_3g104810 | 26.531 | 196 | 119 | 3 | 189 | 361 | 34 | 227 | 3.52e-12 | 67.4 |
MS.gene057845.t1 | MTR_4g012850 | 23.973 | 292 | 193 | 8 | 89 | 362 | 16 | 296 | 3.90e-12 | 67.0 |
MS.gene057845.t1 | MTR_5g032420 | 22.930 | 314 | 198 | 8 | 89 | 358 | 6 | 319 | 4.51e-12 | 67.0 |
MS.gene057845.t1 | MTR_1g095780 | 28.276 | 145 | 102 | 2 | 133 | 275 | 648 | 792 | 5.16e-12 | 67.8 |
MS.gene057845.t1 | MTR_7g015870 | 28.571 | 196 | 114 | 7 | 90 | 265 | 123 | 312 | 1.40e-11 | 65.5 |
MS.gene057845.t1 | MTR_2g032610 | 25.503 | 298 | 185 | 11 | 92 | 362 | 32 | 319 | 2.02e-11 | 64.7 |
MS.gene057845.t1 | MTR_6g033280 | 22.807 | 171 | 124 | 4 | 195 | 358 | 70 | 239 | 3.16e-11 | 64.7 |
MS.gene057845.t1 | MTR_1g088995 | 26.126 | 222 | 135 | 7 | 54 | 267 | 9 | 209 | 5.73e-11 | 62.4 |
MS.gene057845.t1 | MTR_2g102010 | 20.833 | 288 | 200 | 6 | 89 | 358 | 17 | 294 | 6.12e-11 | 63.2 |
MS.gene057845.t1 | MTR_7g015870 | 27.604 | 192 | 117 | 6 | 90 | 265 | 123 | 308 | 6.50e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057845.t1 | AT3G51870 | 67.639 | 377 | 112 | 2 | 6 | 375 | 4 | 377 | 0.0 | 513 |
MS.gene057845.t1 | AT5G01500 | 75.148 | 338 | 84 | 0 | 38 | 375 | 68 | 405 | 2.74e-177 | 499 |
MS.gene057845.t1 | AT4G32400 | 34.495 | 287 | 168 | 7 | 89 | 364 | 114 | 391 | 2.01e-48 | 169 |
MS.gene057845.t1 | AT4G32400 | 29.665 | 209 | 131 | 5 | 72 | 273 | 192 | 391 | 8.27e-19 | 87.4 |
MS.gene057845.t1 | AT4G32400 | 28.177 | 181 | 126 | 1 | 188 | 364 | 113 | 293 | 2.61e-18 | 86.3 |
MS.gene057845.t1 | AT2G37890 | 34.021 | 291 | 172 | 6 | 89 | 360 | 45 | 334 | 2.17e-47 | 164 |
MS.gene057845.t1 | AT2G37890 | 31.606 | 193 | 113 | 6 | 89 | 269 | 152 | 337 | 4.91e-16 | 79.0 |
MS.gene057845.t1 | AT4G01100 | 31.715 | 309 | 168 | 5 | 89 | 359 | 42 | 345 | 5.35e-47 | 164 |
MS.gene057845.t1 | AT4G01100 | 32.536 | 209 | 108 | 5 | 91 | 272 | 147 | 349 | 1.30e-21 | 95.1 |
MS.gene057845.t1 | AT4G26180 | 32.515 | 326 | 186 | 5 | 77 | 374 | 9 | 328 | 6.58e-47 | 163 |
MS.gene057845.t1 | AT3G55640 | 35.570 | 298 | 158 | 8 | 84 | 355 | 33 | 322 | 6.78e-46 | 160 |
MS.gene057845.t1 | AT3G55640 | 35.570 | 298 | 158 | 8 | 84 | 355 | 33 | 322 | 6.78e-46 | 160 |
MS.gene057845.t1 | AT4G01100 | 30.368 | 326 | 164 | 6 | 89 | 359 | 42 | 359 | 7.19e-45 | 159 |
MS.gene057845.t1 | AT4G01100 | 32.536 | 209 | 108 | 5 | 91 | 272 | 161 | 363 | 1.69e-21 | 95.1 |
MS.gene057845.t1 | AT3G53940 | 33.333 | 291 | 172 | 7 | 89 | 359 | 73 | 361 | 8.84e-44 | 155 |
MS.gene057845.t1 | AT4G01100 | 31.438 | 299 | 162 | 6 | 99 | 359 | 2 | 295 | 9.11e-44 | 154 |
MS.gene057845.t1 | AT4G01100 | 32.536 | 209 | 108 | 5 | 91 | 272 | 97 | 299 | 5.91e-22 | 95.5 |
MS.gene057845.t1 | AT1G14560 | 32.203 | 295 | 164 | 4 | 100 | 364 | 38 | 326 | 7.47e-42 | 150 |
MS.gene057845.t1 | AT4G26180 | 32.986 | 288 | 162 | 4 | 77 | 339 | 9 | 290 | 1.40e-41 | 148 |
MS.gene057845.t1 | AT5G61810 | 32.155 | 283 | 168 | 5 | 88 | 359 | 64 | 333 | 1.32e-40 | 146 |
MS.gene057845.t1 | AT5G48970 | 29.739 | 306 | 172 | 7 | 91 | 353 | 24 | 329 | 6.96e-40 | 145 |
MS.gene057845.t1 | AT5G48970 | 30.928 | 194 | 109 | 5 | 190 | 358 | 23 | 216 | 1.65e-19 | 89.0 |
MS.gene057845.t1 | AT5G48970 | 24.880 | 209 | 118 | 5 | 89 | 267 | 135 | 334 | 1.22e-12 | 68.9 |
MS.gene057845.t1 | AT5G61810 | 31.930 | 285 | 170 | 5 | 86 | 359 | 205 | 476 | 1.78e-39 | 146 |
MS.gene057845.t1 | AT1G14560 | 32.963 | 270 | 145 | 4 | 100 | 339 | 38 | 301 | 1.65e-38 | 140 |
MS.gene057845.t1 | AT5G51050 | 33.898 | 295 | 154 | 11 | 84 | 356 | 218 | 493 | 2.72e-38 | 144 |
MS.gene057845.t1 | AT5G51050 | 30.769 | 182 | 119 | 3 | 89 | 267 | 318 | 495 | 4.32e-20 | 92.0 |
MS.gene057845.t1 | AT3G21390 | 29.841 | 315 | 175 | 8 | 91 | 361 | 21 | 333 | 3.75e-37 | 137 |
MS.gene057845.t1 | AT3G21390 | 28.000 | 200 | 121 | 4 | 190 | 366 | 20 | 219 | 4.11e-18 | 85.1 |
MS.gene057845.t1 | AT3G21390 | 26.733 | 202 | 114 | 4 | 89 | 262 | 130 | 325 | 4.17e-12 | 67.0 |
MS.gene057845.t1 | AT3G21390 | 29.841 | 315 | 175 | 8 | 91 | 361 | 43 | 355 | 7.28e-37 | 137 |
MS.gene057845.t1 | AT3G21390 | 26.141 | 241 | 140 | 6 | 164 | 366 | 1 | 241 | 7.38e-18 | 84.3 |
MS.gene057845.t1 | AT3G21390 | 26.733 | 202 | 114 | 4 | 89 | 262 | 152 | 347 | 4.77e-12 | 67.0 |
MS.gene057845.t1 | AT3G20240 | 31.475 | 305 | 173 | 8 | 84 | 361 | 47 | 342 | 8.09e-37 | 137 |
MS.gene057845.t1 | AT5G07320 | 31.250 | 272 | 163 | 6 | 99 | 359 | 219 | 477 | 3.11e-34 | 132 |
MS.gene057845.t1 | AT3G55640 | 37.113 | 194 | 106 | 4 | 84 | 264 | 33 | 223 | 1.14e-32 | 123 |
MS.gene057845.t1 | AT3G55640 | 37.113 | 194 | 106 | 4 | 84 | 264 | 33 | 223 | 1.14e-32 | 123 |
MS.gene057845.t1 | AT5G64970 | 32.095 | 296 | 157 | 10 | 91 | 355 | 137 | 419 | 1.43e-32 | 127 |
MS.gene057845.t1 | AT5G64970 | 28.652 | 178 | 121 | 3 | 183 | 355 | 129 | 305 | 1.16e-12 | 69.3 |
MS.gene057845.t1 | AT5G56450 | 30.169 | 295 | 178 | 8 | 89 | 358 | 34 | 325 | 2.49e-32 | 124 |
MS.gene057845.t1 | AT5G48970 | 28.794 | 257 | 148 | 6 | 132 | 353 | 2 | 258 | 8.03e-32 | 121 |
MS.gene057845.t1 | AT5G48970 | 31.724 | 145 | 91 | 3 | 222 | 358 | 1 | 145 | 6.72e-16 | 77.4 |
MS.gene057845.t1 | AT5G48970 | 24.880 | 209 | 118 | 5 | 89 | 267 | 64 | 263 | 1.06e-12 | 68.2 |
MS.gene057845.t1 | AT5G64970 | 30.976 | 297 | 161 | 10 | 90 | 355 | 12 | 295 | 1.20e-31 | 122 |
MS.gene057845.t1 | AT3G53940 | 35.638 | 188 | 107 | 4 | 89 | 264 | 73 | 258 | 1.23e-30 | 119 |
MS.gene057845.t1 | AT3G53940 | 28.641 | 206 | 120 | 7 | 173 | 355 | 57 | 258 | 1.87e-12 | 67.8 |
MS.gene057845.t1 | AT5G64970 | 32.143 | 280 | 146 | 10 | 91 | 339 | 137 | 403 | 5.66e-29 | 116 |
MS.gene057845.t1 | AT5G64970 | 28.652 | 178 | 121 | 3 | 183 | 355 | 129 | 305 | 1.19e-12 | 69.3 |
MS.gene057845.t1 | AT1G25380 | 28.832 | 274 | 177 | 5 | 101 | 357 | 33 | 305 | 1.88e-26 | 108 |
MS.gene057845.t1 | AT1G25380 | 29.545 | 176 | 105 | 6 | 200 | 359 | 33 | 205 | 1.44e-13 | 71.6 |
MS.gene057845.t1 | AT1G25380 | 28.832 | 274 | 177 | 5 | 101 | 357 | 33 | 305 | 1.88e-26 | 108 |
MS.gene057845.t1 | AT1G25380 | 29.545 | 176 | 105 | 6 | 200 | 359 | 33 | 205 | 1.44e-13 | 71.6 |
MS.gene057845.t1 | AT5G17400 | 29.450 | 309 | 181 | 12 | 76 | 357 | 1 | 299 | 2.07e-26 | 107 |
MS.gene057845.t1 | AT1G14560 | 30.531 | 226 | 127 | 3 | 169 | 364 | 3 | 228 | 3.71e-26 | 105 |
MS.gene057845.t1 | AT1G14560 | 30.500 | 200 | 116 | 5 | 89 | 267 | 25 | 222 | 6.73e-18 | 82.4 |
MS.gene057845.t1 | AT1G78180 | 32.313 | 294 | 159 | 10 | 91 | 355 | 130 | 412 | 4.73e-26 | 108 |
MS.gene057845.t1 | AT1G78180 | 29.651 | 172 | 117 | 2 | 188 | 355 | 127 | 298 | 1.32e-12 | 69.3 |
MS.gene057845.t1 | AT2G30160 | 27.358 | 318 | 206 | 7 | 60 | 358 | 10 | 321 | 1.69e-25 | 105 |
MS.gene057845.t1 | AT2G30160 | 22.816 | 206 | 155 | 1 | 175 | 376 | 28 | 233 | 2.03e-14 | 73.9 |
MS.gene057845.t1 | AT3G08580 | 28.793 | 323 | 200 | 9 | 63 | 358 | 52 | 371 | 4.05e-25 | 105 |
MS.gene057845.t1 | AT3G08580 | 28.793 | 323 | 200 | 9 | 63 | 358 | 52 | 371 | 4.05e-25 | 105 |
MS.gene057845.t1 | AT5G13490 | 30.000 | 290 | 181 | 8 | 89 | 358 | 88 | 375 | 1.15e-24 | 104 |
MS.gene057845.t1 | AT5G13490 | 30.000 | 290 | 181 | 8 | 89 | 358 | 88 | 375 | 1.15e-24 | 104 |
MS.gene057845.t1 | AT2G47490 | 30.182 | 275 | 172 | 8 | 101 | 358 | 29 | 300 | 1.50e-24 | 102 |
MS.gene057845.t1 | AT2G47490 | 27.273 | 176 | 109 | 6 | 200 | 359 | 29 | 201 | 8.82e-11 | 62.8 |
MS.gene057845.t1 | AT4G28390 | 30.450 | 289 | 180 | 8 | 89 | 358 | 83 | 369 | 8.09e-24 | 102 |
MS.gene057845.t1 | AT4G28390 | 30.450 | 289 | 180 | 8 | 89 | 358 | 83 | 369 | 8.09e-24 | 102 |
MS.gene057845.t1 | AT1G07030 | 28.049 | 328 | 206 | 9 | 44 | 358 | 6 | 316 | 3.84e-23 | 99.0 |
MS.gene057845.t1 | AT3G54110 | 25.287 | 261 | 182 | 5 | 89 | 336 | 15 | 275 | 7.96e-22 | 95.1 |
MS.gene057845.t1 | AT4G03115 | 26.866 | 268 | 184 | 6 | 72 | 332 | 21 | 283 | 2.13e-21 | 94.0 |
MS.gene057845.t1 | AT4G03115 | 26.866 | 268 | 184 | 6 | 72 | 332 | 53 | 315 | 2.27e-21 | 94.4 |
MS.gene057845.t1 | AT5G66380 | 30.137 | 292 | 177 | 11 | 91 | 358 | 12 | 300 | 4.15e-21 | 93.2 |
MS.gene057845.t1 | AT4G39460 | 27.698 | 278 | 171 | 8 | 89 | 359 | 58 | 312 | 2.02e-19 | 88.6 |
MS.gene057845.t1 | AT4G39460 | 30.734 | 218 | 119 | 7 | 64 | 270 | 118 | 314 | 2.56e-17 | 82.4 |
MS.gene057845.t1 | AT4G39460 | 27.698 | 278 | 171 | 8 | 89 | 359 | 58 | 312 | 2.02e-19 | 88.6 |
MS.gene057845.t1 | AT4G39460 | 30.734 | 218 | 119 | 7 | 64 | 270 | 118 | 314 | 2.56e-17 | 82.4 |
MS.gene057845.t1 | AT4G39460 | 27.698 | 278 | 171 | 8 | 89 | 359 | 58 | 312 | 2.02e-19 | 88.6 |
MS.gene057845.t1 | AT4G39460 | 30.734 | 218 | 119 | 7 | 64 | 270 | 118 | 314 | 2.56e-17 | 82.4 |
MS.gene057845.t1 | AT5G58970 | 23.675 | 283 | 201 | 5 | 89 | 357 | 16 | 297 | 4.94e-19 | 87.0 |
MS.gene057845.t1 | AT1G34065 | 26.950 | 282 | 178 | 6 | 89 | 364 | 82 | 341 | 6.14e-19 | 87.4 |
MS.gene057845.t1 | AT1G34065 | 26.950 | 282 | 178 | 6 | 89 | 364 | 75 | 334 | 6.32e-19 | 87.4 |
MS.gene057845.t1 | AT4G03115 | 27.778 | 216 | 144 | 5 | 124 | 332 | 2 | 212 | 1.87e-18 | 84.3 |
MS.gene057845.t1 | AT4G03115 | 27.014 | 211 | 146 | 4 | 129 | 332 | 11 | 220 | 1.09e-17 | 82.4 |
MS.gene057845.t1 | AT1G14140 | 24.407 | 295 | 192 | 9 | 90 | 361 | 17 | 303 | 1.92e-17 | 82.4 |
MS.gene057845.t1 | AT4G03115 | 29.146 | 199 | 136 | 3 | 72 | 270 | 21 | 214 | 3.73e-17 | 80.1 |
MS.gene057845.t1 | AT4G11440 | 25.965 | 285 | 185 | 9 | 90 | 359 | 331 | 604 | 3.81e-17 | 83.6 |
MS.gene057845.t1 | AT4G11440 | 25.965 | 285 | 185 | 9 | 90 | 359 | 331 | 604 | 3.81e-17 | 83.6 |
MS.gene057845.t1 | AT4G03115 | 29.146 | 199 | 136 | 3 | 72 | 270 | 21 | 214 | 4.03e-17 | 80.1 |
MS.gene057845.t1 | AT5G01340 | 23.958 | 288 | 192 | 8 | 90 | 357 | 18 | 298 | 1.11e-15 | 77.4 |
MS.gene057845.t1 | AT5G46800 | 25.952 | 289 | 188 | 9 | 91 | 355 | 10 | 296 | 2.72e-15 | 76.3 |
MS.gene057845.t1 | AT5G46800 | 28.497 | 193 | 123 | 4 | 89 | 267 | 108 | 299 | 7.39e-15 | 75.1 |
MS.gene057845.t1 | AT5G46800 | 25.952 | 289 | 188 | 9 | 91 | 355 | 10 | 296 | 2.72e-15 | 76.3 |
MS.gene057845.t1 | AT5G46800 | 28.497 | 193 | 123 | 4 | 89 | 267 | 108 | 299 | 7.39e-15 | 75.1 |
MS.gene057845.t1 | AT5G46800 | 25.952 | 289 | 188 | 9 | 91 | 355 | 10 | 296 | 2.72e-15 | 76.3 |
MS.gene057845.t1 | AT5G46800 | 28.497 | 193 | 123 | 4 | 89 | 267 | 108 | 299 | 7.39e-15 | 75.1 |
MS.gene057845.t1 | AT5G26200 | 25.758 | 264 | 158 | 8 | 138 | 363 | 79 | 342 | 2.21e-14 | 73.9 |
MS.gene057845.t1 | AT5G26200 | 26.768 | 198 | 121 | 5 | 189 | 364 | 41 | 236 | 7.34e-13 | 69.3 |
MS.gene057845.t1 | AT1G74240 | 23.355 | 304 | 190 | 9 | 89 | 355 | 36 | 333 | 4.30e-14 | 73.2 |
MS.gene057845.t1 | AT4G24570 | 23.934 | 305 | 197 | 5 | 89 | 358 | 6 | 310 | 5.97e-14 | 72.4 |
MS.gene057845.t1 | AT2G22500 | 24.172 | 302 | 196 | 7 | 89 | 357 | 6 | 307 | 1.95e-12 | 67.8 |
MS.gene057845.t1 | AT5G58970 | 23.377 | 231 | 163 | 4 | 89 | 305 | 16 | 246 | 7.73e-12 | 65.5 |
MS.gene057845.t1 | AT1G72820 | 27.273 | 187 | 117 | 4 | 189 | 358 | 33 | 217 | 8.20e-12 | 66.2 |
MS.gene057845.t1 | AT1G72820 | 27.273 | 187 | 117 | 4 | 189 | 358 | 33 | 217 | 8.20e-12 | 66.2 |
MS.gene057845.t1 | AT2G35800 | 21.864 | 279 | 197 | 8 | 90 | 362 | 546 | 809 | 1.11e-11 | 67.0 |
MS.gene057845.t1 | AT1G79900 | 22.422 | 223 | 166 | 2 | 118 | 333 | 36 | 258 | 4.48e-11 | 63.5 |
Find 99 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATAAAACCAATTGTCTTCT+TGG | 0.193554 | 4.4:-84338447 | None:intergenic |
GGCGGAGACGGTGGCGAATT+TGG | 0.209824 | 4.4:-84338133 | None:intergenic |
TTCCTTCCCTATCATTGATA+TGG | 0.235134 | 4.4:-84340426 | None:intergenic |
ACAGTATTAGATGCAATTTC+AGG | 0.237543 | 4.4:+84341492 | MS.gene057845:CDS |
GTGGCACAAGATGGAGTTAT+TGG | 0.246853 | 4.4:+84341771 | MS.gene057845:CDS |
GGCCTTGGTCCTTCTCTTAT+CGG | 0.280665 | 4.4:+84341184 | MS.gene057845:CDS |
GCATCTAATACTGTCTTATA+AGG | 0.297227 | 4.4:-84341483 | None:intergenic |
CTTTGCTTATGAAATTTATA+AGG | 0.302156 | 4.4:+84340607 | MS.gene057845:CDS |
TTCGTTGTTCGGTTTGGTTT+GGG | 0.312231 | 4.4:-84338157 | None:intergenic |
ATTCGTTGTTCGGTTTGGTT+TGG | 0.334224 | 4.4:-84338158 | None:intergenic |
GGGAAGGAAGAAGGCATTAG+AGG | 0.342831 | 4.4:+84340440 | MS.gene057845:CDS |
TTTCTCGCCGGTGCTGTTGC+TGG | 0.345164 | 4.4:+84338255 | MS.gene057845:CDS |
AGAAACAATGCAGCATCTTT+AGG | 0.351166 | 4.4:-84338237 | None:intergenic |
TTAGAGGAGGTGGTTAAGTT+GGG | 0.351672 | 4.4:-84338036 | None:intergenic |
CAAAAGTTAACTGCAATATA+TGG | 0.353568 | 4.4:-84341214 | None:intergenic |
GCTTCTTTCTACTACGGCCT+TGG | 0.361517 | 4.4:+84341169 | MS.gene057845:CDS |
AAGAAGGCATTAGAGGTTAC+TGG | 0.369624 | 4.4:+84340447 | MS.gene057845:CDS |
CAGACTCATGGAGTGCGAAT+TGG | 0.377216 | 4.4:+84338413 | MS.gene057845:intron |
GGCGAATTCGTTGTTCGGTT+TGG | 0.378119 | 4.4:-84338163 | None:intergenic |
TTGCAGGCCATATCAATGAT+AGG | 0.383329 | 4.4:+84340419 | MS.gene057845:intron |
AAGAGCTGAACAGCACTATA+AGG | 0.384778 | 4.4:-84340587 | None:intergenic |
GTCGGGGCGAATTCGTTGTT+CGG | 0.386237 | 4.4:-84338168 | None:intergenic |
TAAGAAGCTGAGCTGGCGTC+GGG | 0.390211 | 4.4:-84338185 | None:intergenic |
AACGATGAGCTCTCTGTTGT+CGG | 0.404990 | 4.4:+84340728 | MS.gene057845:CDS |
TTTGGTTTGGGAGGCGGAGA+CGG | 0.413057 | 4.4:-84338145 | None:intergenic |
GAGTTGTTGAAGAGGTGGTT+GGG | 0.416337 | 4.4:-84338072 | None:intergenic |
GGAGTTGTTGAAGAGGTGGT+TGG | 0.421605 | 4.4:-84338073 | None:intergenic |
GGGTGAAACGACGTCGTTAG+AGG | 0.422796 | 4.4:-84338052 | None:intergenic |
GAAAGTGCCAAGAAGACAAT+TGG | 0.426138 | 4.4:+84338440 | MS.gene057845:CDS |
CGTAATCTCAGGACATCTAA+AGG | 0.428560 | 4.4:-84341002 | None:intergenic |
ACGAAGACAGATGCAACTTA+AGG | 0.441171 | 4.4:+84341455 | MS.gene057845:CDS |
CCTTCTCACTAGCAGCAATC+AGG | 0.448175 | 4.4:-84342156 | None:intergenic |
AGCAGCTCCAGCAACAGCAC+CGG | 0.449657 | 4.4:-84338262 | None:intergenic |
GTTAGAGGAGGTGGTTAAGT+TGG | 0.453967 | 4.4:-84338037 | None:intergenic |
GATCACAAGTACCTGCTGTT+TGG | 0.457445 | 4.4:-84341834 | None:intergenic |
GTTCGGTTTGGTTTGGGAGG+CGG | 0.464435 | 4.4:-84338151 | None:intergenic |
CAAGTGCGACGACGGCGATC+GGG | 0.465236 | 4.4:-84338212 | None:intergenic |
TTACGATTAGCTGTTGAACC+TGG | 0.470496 | 4.4:+84341020 | MS.gene057845:CDS |
CGAAGACAGATGCAACTTAA+GGG | 0.474525 | 4.4:+84341456 | MS.gene057845:CDS |
ACAAGTGCGACGACGGCGAT+CGG | 0.484450 | 4.4:-84338213 | None:intergenic |
GTAATCTCAGGACATCTAAA+GGG | 0.501170 | 4.4:-84341001 | None:intergenic |
AAATTTACAGAAAATATTCA+AGG | 0.503522 | 4.4:+84340700 | MS.gene057845:intron |
TTAAGAAGCTGAGCTGGCGT+CGG | 0.509354 | 4.4:-84338186 | None:intergenic |
TCGAATCAAGCTTCTCATGC+AGG | 0.519660 | 4.4:+84338311 | MS.gene057845:CDS |
GGCATTTCTTAAGTTTGTTG+CGG | 0.523063 | 4.4:-84342204 | None:intergenic |
CGCCTTGAGCATGGTAAGAG+AGG | 0.526243 | 4.4:+84341138 | MS.gene057845:CDS |
AACGACGTCGTTAGAGGAGG+TGG | 0.531791 | 4.4:-84338046 | None:intergenic |
GATGTTGCGCCACGTGGCGA+CGG | 0.531950 | 4.4:-84338013 | None:intergenic |
AAGCATTGGGCACAAATCCT+CGG | 0.546969 | 4.4:-84341800 | None:intergenic |
ACAAGTACCTGCTGTTTGGT+AGG | 0.550522 | 4.4:-84341830 | None:intergenic |
TAGAGGAGGTGGTTAAGTTG+GGG | 0.556575 | 4.4:-84338035 | None:intergenic |
TCGATCAAGTGGAGCAGTGA+CGG | 0.556672 | 4.4:-84338292 | None:intergenic |
AGAAGCTTGATTCGATCAAG+TGG | 0.560589 | 4.4:-84338303 | None:intergenic |
CACACTTACATGCTATCCTC+TGG | 0.561081 | 4.4:+84341425 | MS.gene057845:CDS |
CAACAGCTAATCGTAATCTC+AGG | 0.561207 | 4.4:-84341013 | None:intergenic |
TTTGGTTGATGCAGGTATTG+TGG | 0.565467 | 4.4:+84341752 | MS.gene057845:intron |
TTTATAGGTCGCCTTGAGCA+TGG | 0.566530 | 4.4:+84341129 | MS.gene057845:intron |
TTGAGCATGGTAAGAGAGGA+AGG | 0.567910 | 4.4:+84341142 | MS.gene057845:CDS |
AATTTACAGAAAATATTCAA+GGG | 0.571080 | 4.4:+84340701 | MS.gene057845:intron |
GGTGGCGAATTTGGAAGGAA+TGG | 0.574574 | 4.4:-84338124 | None:intergenic |
AGGAATGGTGGTGGTTGCGT+CGG | 0.575629 | 4.4:-84338109 | None:intergenic |
GGTTTGGGAGGCGGAGACGG+TGG | 0.576397 | 4.4:-84338142 | None:intergenic |
TGAAGGTGGAGTTGTTGAAG+AGG | 0.577683 | 4.4:-84338080 | None:intergenic |
TACGATTAGCTGTTGAACCT+GGG | 0.579092 | 4.4:+84341021 | MS.gene057845:CDS |
GTTGTCGGAAGACTTGCAGC+AGG | 0.579618 | 4.4:+84340743 | MS.gene057845:CDS |
TGCAGGCCATATCAATGATA+GGG | 0.580409 | 4.4:+84340420 | MS.gene057845:intron |
GGGTGGTTAAGAAGCTGAGC+TGG | 0.580972 | 4.4:-84338192 | None:intergenic |
GAGACGGTGGCGAATTTGGA+AGG | 0.582054 | 4.4:-84338129 | None:intergenic |
GGAGTTATTGGCTTGTACCG+AGG | 0.582134 | 4.4:+84341783 | MS.gene057845:CDS |
GCAGGTATTGTGGCACAAGA+TGG | 0.586976 | 4.4:+84341762 | MS.gene057845:intron |
GATGCTGCATTGTTTCTCGC+CGG | 0.587355 | 4.4:+84338243 | MS.gene057845:CDS |
TCAATGATAGGGAAGGAAGA+AGG | 0.587858 | 4.4:+84340431 | MS.gene057845:CDS |
AGGTGGAGTTGTTGAAGAGG+TGG | 0.589863 | 4.4:-84338077 | None:intergenic |
GGCCATATCAATGATAGGGA+AGG | 0.590764 | 4.4:+84340424 | MS.gene057845:intron |
GTGCGACGACGGCGATCGGG+TGG | 0.593456 | 4.4:-84338209 | None:intergenic |
GAATTTGGAAGGAATGGTGG+TGG | 0.593957 | 4.4:-84338118 | None:intergenic |
GGCATTAGAGGTTACTGGAA+GGG | 0.594350 | 4.4:+84340452 | MS.gene057845:CDS |
CCTGATTGCTGCTAGTGAGA+AGG | 0.594558 | 4.4:+84342156 | MS.gene057845:CDS |
GGCAAGAGATGCTGAAAGCA+CGG | 0.596654 | 4.4:-84341403 | None:intergenic |
GGAGTTTCAAACAATTGCAG+AGG | 0.597624 | 4.4:+84342177 | MS.gene057845:CDS |
TCTGTCATTGTTCGACACCC+AGG | 0.599777 | 4.4:-84341038 | None:intergenic |
TTCCTCTCTTACCATGCTCA+AGG | 0.602242 | 4.4:-84341140 | None:intergenic |
TAGTGATGCTCACCTGTGGT+AGG | 0.606895 | 4.4:-84340478 | None:intergenic |
GGAGCTATTCCGATAAGAGA+AGG | 0.610783 | 4.4:-84341193 | None:intergenic |
GGCGAATTTGGAAGGAATGG+TGG | 0.612416 | 4.4:-84338121 | None:intergenic |
GTTGTTCGGTTTGGTTTGGG+AGG | 0.613048 | 4.4:-84338154 | None:intergenic |
GTTGGGGATGTTGCGCCACG+TGG | 0.631014 | 4.4:-84338019 | None:intergenic |
TTTAGGAACAAGTGCGACGA+CGG | 0.634067 | 4.4:-84338220 | None:intergenic |
CTGGAAGGGTAACCTACCAC+AGG | 0.641606 | 4.4:+84340466 | MS.gene057845:CDS |
CAGAGGATAGCATGTAAGTG+TGG | 0.643661 | 4.4:-84341424 | None:intergenic |
AGGCATTAGAGGTTACTGGA+AGG | 0.648807 | 4.4:+84340451 | MS.gene057845:CDS |
TGTCTTCGTACTGTGTCCAG+AGG | 0.651781 | 4.4:-84341441 | None:intergenic |
GGTTGCGTCGGTGAAAGTGA+AGG | 0.665657 | 4.4:-84338097 | None:intergenic |
TGCGTCGGTGAAAGTGAAGG+TGG | 0.665833 | 4.4:-84338094 | None:intergenic |
TGAAACGACGTCGTTAGAGG+AGG | 0.667306 | 4.4:-84338049 | None:intergenic |
TTCCGATAAGAGAAGGACCA+AGG | 0.667681 | 4.4:-84341186 | None:intergenic |
CGAACAAAACCGTCGCCACG+TGG | 0.668933 | 4.4:+84338004 | MS.gene057845:CDS |
AAGAAGCTGAGCTGGCGTCG+GGG | 0.681783 | 4.4:-84338184 | None:intergenic |
TGGGTGTCGAACAATGACAG+AGG | 0.760125 | 4.4:+84341040 | MS.gene057845:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTTACAGAAAATATTCA+AGG | + | chr4.4:84340700-84340719 | MS.gene057845:intron | 15.0% |
!! | AAATTTGCAAAAAAAATAAG+TGG | + | chr4.4:84341954-84341973 | MS.gene057845:intron | 15.0% |
!! | AACATTACCTATAAATTTAT+TGG | + | chr4.4:84340378-84340397 | MS.gene057845:intron | 15.0% |
!! | AATTTACAGAAAATATTCAA+GGG | + | chr4.4:84340701-84340720 | MS.gene057845:intron | 15.0% |
!! | ACTTAATATTATGAGTTTAA+TGG | + | chr4.4:84338801-84338820 | MS.gene057845:intron | 15.0% |
!! | CACAAAAAAAAAAAAATTAC+TGG | - | chr4.4:84340906-84340925 | None:intergenic | 15.0% |
!! | TTATGAGTATATTTATATGT+AGG | + | chr4.4:84341661-84341680 | MS.gene057845:intron | 15.0% |
!!! | GATTTTATATTTTTTTGTGT+TGG | + | chr4.4:84340263-84340282 | MS.gene057845:intron | 15.0% |
!!! | TATTTTTTTTGCAAATTTAC+TGG | - | chr4.4:84341952-84341971 | None:intergenic | 15.0% |
!! | AAAATATAAAATCCTTGATC+AGG | - | chr4.4:84340256-84340275 | None:intergenic | 20.0% |
!! | AAATATAAAATCCTTGATCA+GGG | - | chr4.4:84340255-84340274 | None:intergenic | 20.0% |
!! | AAATATTTGTAAACCATACA+AGG | - | chr4.4:84340825-84340844 | None:intergenic | 20.0% |
!! | AAATGAATATGTCAACTTAT+CGG | - | chr4.4:84338870-84338889 | None:intergenic | 20.0% |
!! | AAGTTGACATATTCATTTAA+TGG | + | chr4.4:84338872-84338891 | MS.gene057845:intron | 20.0% |
!! | ATATGATATCATGTCAATTA+AGG | - | chr4.4:84338730-84338749 | None:intergenic | 20.0% |
!! | CATCAACCAAAATATTAATA+TGG | - | chr4.4:84341743-84341762 | None:intergenic | 20.0% |
!! | CTTTGCTTATGAAATTTATA+AGG | + | chr4.4:84340607-84340626 | MS.gene057845:CDS | 20.0% |
!!! | AAAAAGAACATTTTCATCAT+GGG | + | chr4.4:84339194-84339213 | MS.gene057845:intron | 20.0% |
!!! | AATAACTTGATTTTTGAGTA+GGG | - | chr4.4:84339442-84339461 | None:intergenic | 20.0% |
!!! | AATTGTTTTAGTTCTGTAAT+TGG | + | chr4.4:84340154-84340173 | MS.gene057845:intron | 20.0% |
!!! | TAAAAAGAACATTTTCATCA+TGG | + | chr4.4:84339193-84339212 | MS.gene057845:intron | 20.0% |
!!! | TAACTGCCATATTAATATTT+TGG | + | chr4.4:84341734-84341753 | MS.gene057845:intron | 20.0% |
!!! | TAATGATTATTTTACACTGT+CGG | + | chr4.4:84338902-84338921 | MS.gene057845:intron | 20.0% |
!!! | TAATTTTTAGCGATATTAGA+TGG | + | chr4.4:84340329-84340348 | MS.gene057845:intron | 20.0% |
!!! | TTTTACACATACATATAATG+AGG | + | chr4.4:84338656-84338675 | MS.gene057845:intron | 20.0% |
! | AAAATTATTGTCAAGGAGTT+TGG | - | chr4.4:84340316-84340335 | None:intergenic | 25.0% |
! | AAAGACTACTCAACATTATA+AGG | - | chr4.4:84340525-84340544 | None:intergenic | 25.0% |
! | AAATTATTGTCAAGGAGTTT+GGG | - | chr4.4:84340315-84340334 | None:intergenic | 25.0% |
! | AATAAAACCAATTGTCTTCT+TGG | - | chr4.4:84338450-84338469 | None:intergenic | 25.0% |
! | AATATAAAATCCTTGATCAG+GGG | - | chr4.4:84340254-84340273 | None:intergenic | 25.0% |
! | AATTCTTGAAAGATAGTTAG+CGG | - | chr4.4:84340637-84340656 | None:intergenic | 25.0% |
! | AATTGAAGACTTCATTTGAT+CGG | - | chr4.4:84339296-84339315 | None:intergenic | 25.0% |
! | ACAATTCTGTTCATTAAAAC+GGG | - | chr4.4:84341105-84341124 | None:intergenic | 25.0% |
! | ATCAGCAAAGTTAGAAATTA+AGG | - | chr4.4:84341904-84341923 | None:intergenic | 25.0% |
! | ATCGCTAAAAATTATTGTCA+AGG | - | chr4.4:84340323-84340342 | None:intergenic | 25.0% |
! | ATGATATATTTAGCTGATGA+TGG | + | chr4.4:84342047-84342066 | MS.gene057845:intron | 25.0% |
! | ATTAAAACGGGAAAGATATA+AGG | - | chr4.4:84341093-84341112 | None:intergenic | 25.0% |
! | CAAAAGTTAACTGCAATATA+TGG | - | chr4.4:84341217-84341236 | None:intergenic | 25.0% |
! | CACAATTCTGTTCATTAAAA+CGG | - | chr4.4:84341106-84341125 | None:intergenic | 25.0% |
! | GAAAACTACATGAAAATTGA+TGG | - | chr4.4:84340212-84340231 | None:intergenic | 25.0% |
! | GTAAGCTCCAATAAATTTAT+AGG | - | chr4.4:84340388-84340407 | None:intergenic | 25.0% |
! | GTACTAAATGTGTAAGTTAA+TGG | + | chr4.4:84340285-84340304 | MS.gene057845:intron | 25.0% |
! | TATACTATGAAGCATAGATA+CGG | + | chr4.4:84339947-84339966 | MS.gene057845:intron | 25.0% |
! | TATAGAACTGAAATCATGAA+AGG | - | chr4.4:84339931-84339950 | None:intergenic | 25.0% |
! | TTATTGCTATAACAGCTAAA+GGG | - | chr4.4:84341640-84341659 | None:intergenic | 25.0% |
! | TTGACATGATATCATATCAT+TGG | + | chr4.4:84338733-84338752 | MS.gene057845:intron | 25.0% |
! | TTTAGTCTATTATCCATACA+AGG | - | chr4.4:84341330-84341349 | None:intergenic | 25.0% |
! | TTTCAAATTATTAGCTGTGT+CGG | - | chr4.4:84340008-84340027 | None:intergenic | 25.0% |
!! | ATTCTAAAAGACACAATCAT+TGG | - | chr4.4:84339601-84339620 | None:intergenic | 25.0% |
!! | GGAATTTGTTTATACCATTT+CGG | + | chr4.4:84339026-84339045 | MS.gene057845:intron | 25.0% |
!! | TTACTACAAATCTCTGAAAA+TGG | - | chr4.4:84338359-84338378 | None:intergenic | 25.0% |
!!! | ACATCTATTTTTATCTCAAC+CGG | + | chr4.4:84339499-84339518 | MS.gene057845:intron | 25.0% |
!!! | ATTAATATTTTGGTTGATGC+AGG | + | chr4.4:84341744-84341763 | MS.gene057845:intron | 25.0% |
!!! | CAATAACTTGATTTTTGAGT+AGG | - | chr4.4:84339443-84339462 | None:intergenic | 25.0% |
!!! | CTTTATCTTTTTAAGTGCAT+TGG | + | chr4.4:84341268-84341287 | MS.gene057845:intron | 25.0% |
!!! | GTGTTCTAAAATGAATGTAA+TGG | - | chr4.4:84339104-84339123 | None:intergenic | 25.0% |
!!! | TTGTTTTAGTGTTTCTTTTC+AGG | + | chr4.4:84340550-84340569 | MS.gene057845:intron | 25.0% |
AATTATTGTCAAGGAGTTTG+GGG | - | chr4.4:84340314-84340333 | None:intergenic | 30.0% | |
ACAGTATTAGATGCAATTTC+AGG | + | chr4.4:84341492-84341511 | MS.gene057845:CDS | 30.0% | |
AGCAAAGTTAGAAATTAAGG+AGG | - | chr4.4:84341901-84341920 | None:intergenic | 30.0% | |
AGTAAGATACATTGACATCA+AGG | - | chr4.4:84340955-84340974 | None:intergenic | 30.0% | |
AGTTTATTGATATACACCGT+CGG | + | chr4.4:84338488-84338507 | MS.gene057845:intron | 30.0% | |
CATTACTTGATACATTGATG+AGG | + | chr4.4:84338526-84338545 | MS.gene057845:intron | 30.0% | |
CTAAAACAATTACTAACCAG+AGG | - | chr4.4:84340145-84340164 | None:intergenic | 30.0% | |
CTTATTGCTATAACAGCTAA+AGG | - | chr4.4:84341641-84341660 | None:intergenic | 30.0% | |
GATGTTTATGAAATGCATTC+TGG | + | chr4.4:84338383-84338402 | MS.gene057845:intron | 30.0% | |
GCATCTAATACTGTCTTATA+AGG | - | chr4.4:84341486-84341505 | None:intergenic | 30.0% | |
GGAGTTACAATAATACACAA+GGG | - | chr4.4:84339526-84339545 | None:intergenic | 30.0% | |
GGTTGAGATAAAAATAGATG+TGG | - | chr4.4:84339500-84339519 | None:intergenic | 30.0% | |
GTGTACATAACATTTACACA+TGG | - | chr4.4:84338564-84338583 | None:intergenic | 30.0% | |
GTTTAATGGAAGTAAACTGA+CGG | + | chr4.4:84338815-84338834 | MS.gene057845:intron | 30.0% | |
TCTATTATCCATACAAGGTT+AGG | - | chr4.4:84341325-84341344 | None:intergenic | 30.0% | |
TGGAGTTACAATAATACACA+AGG | - | chr4.4:84339527-84339546 | None:intergenic | 30.0% | |
TGTACACTAGACAGTTAAAT+TGG | - | chr4.4:84339547-84339566 | None:intergenic | 30.0% | |
TTCAACCACATTAAATGATG+TGG | - | chr4.4:84338687-84338706 | None:intergenic | 30.0% | |
TTCAGTGTAATTACAAGTGT+TGG | + | chr4.4:84340039-84340058 | MS.gene057845:intron | 30.0% | |
TTTGTAAACCATACAAGGAT+AGG | - | chr4.4:84340820-84340839 | None:intergenic | 30.0% | |
! | AACAGAATTGTGGCTTTTAT+AGG | + | chr4.4:84341114-84341133 | MS.gene057845:intron | 30.0% |
! | CTCTTTCTTTTCTATTACTC+AGG | - | chr4.4:84339365-84339384 | None:intergenic | 30.0% |
! | TAGCGATATTAGATGGTTTT+TGG | + | chr4.4:84340336-84340355 | MS.gene057845:intron | 30.0% |
! | TCAAGTAACGCATTTTGAAT+AGG | - | chr4.4:84339057-84339076 | None:intergenic | 30.0% |
!! | ACTTTGAAGTAGATTGTGAT+TGG | + | chr4.4:84342081-84342100 | MS.gene057845:intron | 30.0% |
!! | CGTTTTAATGAACAGAATTG+TGG | + | chr4.4:84341104-84341123 | MS.gene057845:intron | 30.0% |
!! | TATCGGTTTACTTCAATATG+TGG | - | chr4.4:84338853-84338872 | None:intergenic | 30.0% |
!!! | GAAGACAATTGGTTTTATTG+AGG | + | chr4.4:84338451-84338470 | MS.gene057845:CDS | 30.0% |
!!! | GGTAGGTTTTTTAAAGCATT+GGG | - | chr4.4:84341816-84341835 | None:intergenic | 30.0% |
!!! | TGGTAGGTTTTTTAAAGCAT+TGG | - | chr4.4:84341817-84341836 | None:intergenic | 30.0% |
!!! | TGTTTCTTTTCAGGTGATTA+GGG | + | chr4.4:84340559-84340578 | MS.gene057845:intron | 30.0% |
!!! | TTTTTAAGTGCATTGGAGTT+TGG | + | chr4.4:84341275-84341294 | MS.gene057845:intron | 30.0% |
AATCCAGTTTGCAGTCTAAA+GGG | + | chr4.4:84340178-84340197 | MS.gene057845:intron | 35.0% | |
AGAAACAATGCAGCATCTTT+AGG | - | chr4.4:84338240-84338259 | None:intergenic | 35.0% | |
AGACACAATCATTGGATGTT+AGG | - | chr4.4:84339593-84339612 | None:intergenic | 35.0% | |
AGTTAGAAATTAAGGAGGCA+TGG | - | chr4.4:84341896-84341915 | None:intergenic | 35.0% | |
CATATTGAACCTATGAAGCA+CGG | - | chr4.4:84340113-84340132 | None:intergenic | 35.0% | |
CTTACGTTAACAAGATTTGC+AGG | + | chr4.4:84340403-84340422 | MS.gene057845:intron | 35.0% | |
GTAATCTCAGGACATCTAAA+GGG | - | chr4.4:84341004-84341023 | None:intergenic | 35.0% | |
TAAAAAACCTACCAAACAGC+AGG | + | chr4.4:84341823-84341842 | MS.gene057845:CDS | 35.0% | |
TAAGACATCCTAACCTTGTA+TGG | + | chr4.4:84341314-84341333 | MS.gene057845:intron | 35.0% | |
TAATCCAGTTTGCAGTCTAA+AGG | + | chr4.4:84340177-84340196 | MS.gene057845:intron | 35.0% | |
TACAATAATACACAAGGGTC+CGG | - | chr4.4:84339521-84339540 | None:intergenic | 35.0% | |
TGATGCCACATCATTTAATG+TGG | + | chr4.4:84338679-84338698 | MS.gene057845:intron | 35.0% | |
TGGTTACATGATGTCAAAGA+TGG | - | chr4.4:84339237-84339256 | None:intergenic | 35.0% | |
TTATGAGACCTATCCTTGTA+TGG | + | chr4.4:84340809-84340828 | MS.gene057845:intron | 35.0% | |
TTCCTTCCCTATCATTGATA+TGG | - | chr4.4:84340429-84340448 | None:intergenic | 35.0% | |
TTGAATAGGAAACACCGAAA+TGG | - | chr4.4:84339043-84339062 | None:intergenic | 35.0% | |
TTGAGTCAGCTATTATCTGA+CGG | + | chr4.4:84339650-84339669 | MS.gene057845:intron | 35.0% | |
! | AACAATGACAGAGGTATATG+TGG | + | chr4.4:84341049-84341068 | MS.gene057845:intron | 35.0% |
! | ACAATGACAGAGGTATATGT+GGG | + | chr4.4:84341050-84341069 | MS.gene057845:intron | 35.0% |
! | GCAAGTTGAAGAGATCAAAA+TGG | - | chr4.4:84339692-84339711 | None:intergenic | 35.0% |
! | GCATGTTTTGCACAGATAAA+GGG | - | chr4.4:84341611-84341630 | None:intergenic | 35.0% |
! | GGTTTTGCTTCTTTCTACTA+CGG | + | chr4.4:84341163-84341182 | MS.gene057845:CDS | 35.0% |
! | GTTCTCTTTTGATACTTCTC+TGG | - | chr4.4:84341363-84341382 | None:intergenic | 35.0% |
!! | AAAATAGATGTGGCTCTAGA+AGG | - | chr4.4:84339490-84339509 | None:intergenic | 35.0% |
!! | AGATGCAATTTCAGGTTAGT+TGG | + | chr4.4:84341500-84341519 | MS.gene057845:intron | 35.0% |
!! | GGCATTTCTTAAGTTTGTTG+CGG | - | chr4.4:84342207-84342226 | None:intergenic | 35.0% |
!! | GTTTCTCGTTGGTAGTTAAT+TGG | + | chr4.4:84338999-84339018 | MS.gene057845:intron | 35.0% |
!!! | GTGTTTCTTTTCAGGTGATT+AGG | + | chr4.4:84340558-84340577 | MS.gene057845:intron | 35.0% |
AAGAGCTGAACAGCACTATA+AGG | - | chr4.4:84340590-84340609 | None:intergenic | 40.0% | |
AAGAGTTCCTCAAATAGCTC+TGG | + | chr4.4:84339256-84339275 | MS.gene057845:intron | 40.0% | |
ACAAGTTCCAGAGCTATTTG+AGG | - | chr4.4:84339266-84339285 | None:intergenic | 40.0% | |
ACACCTGAACATGCAATGTT+TGG | - | chr4.4:84340667-84340686 | None:intergenic | 40.0% | |
ACGAAGACAGATGCAACTTA+AGG | + | chr4.4:84341455-84341474 | MS.gene057845:CDS | 40.0% | |
AGAGCTATTTGAGGAACTCT+TGG | - | chr4.4:84339257-84339276 | None:intergenic | 40.0% | |
ATACCCTTTAGACTGCAAAC+TGG | - | chr4.4:84340184-84340203 | None:intergenic | 40.0% | |
ATATGTAGGCACACACTGAT+AGG | + | chr4.4:84341675-84341694 | MS.gene057845:intron | 40.0% | |
ATGAAGCATAGATACGGACA+CGG | + | chr4.4:84339953-84339972 | MS.gene057845:intron | 40.0% | |
CAACAGCTAATCGTAATCTC+AGG | - | chr4.4:84341016-84341035 | None:intergenic | 40.0% | |
CGAAGACAGATGCAACTTAA+GGG | + | chr4.4:84341456-84341475 | MS.gene057845:CDS | 40.0% | |
CGTAATCTCAGGACATCTAA+AGG | - | chr4.4:84341005-84341024 | None:intergenic | 40.0% | |
GGAGTTTCAAACAATTGCAG+AGG | + | chr4.4:84342177-84342196 | MS.gene057845:CDS | 40.0% | |
GTAATTAACTCCCCTGATCA+AGG | + | chr4.4:84340241-84340260 | MS.gene057845:intron | 40.0% | |
GTACCAAACATTGCATGTTC+AGG | + | chr4.4:84340661-84340680 | MS.gene057845:intron | 40.0% | |
GTGTTGCGTGTTAGTAAGTT+GGG | - | chr4.4:84342023-84342042 | None:intergenic | 40.0% | |
TATGTAGGCACACACTGATA+GGG | + | chr4.4:84341676-84341695 | MS.gene057845:intron | 40.0% | |
TCAATGATAGGGAAGGAAGA+AGG | + | chr4.4:84340431-84340450 | MS.gene057845:CDS | 40.0% | |
TGCAGGCCATATCAATGATA+GGG | + | chr4.4:84340420-84340439 | MS.gene057845:intron | 40.0% | |
TGTGTTGCGTGTTAGTAAGT+TGG | - | chr4.4:84342024-84342043 | None:intergenic | 40.0% | |
TTAGAGGAGGTGGTTAAGTT+GGG | - | chr4.4:84338039-84338058 | None:intergenic | 40.0% | |
TTGCAGGCCATATCAATGAT+AGG | + | chr4.4:84340419-84340438 | MS.gene057845:intron | 40.0% | |
! | AGAAATTAAGGAGGCATGGT+AGG | - | chr4.4:84341892-84341911 | None:intergenic | 40.0% |
! | AGAAGCTTGATTCGATCAAG+TGG | - | chr4.4:84338306-84338325 | None:intergenic | 40.0% |
! | CGCATGTTTTGCACAGATAA+AGG | - | chr4.4:84341612-84341631 | None:intergenic | 40.0% |
! | GCTTAACAACTGTTTCTCGT+TGG | + | chr4.4:84338988-84339007 | MS.gene057845:intron | 40.0% |
! | GTGTAACTCTTTTACACCGA+CGG | - | chr4.4:84338507-84338526 | None:intergenic | 40.0% |
! | TACGATTAGCTGTTGAACCT+GGG | + | chr4.4:84341021-84341040 | MS.gene057845:CDS | 40.0% |
! | TTACGATTAGCTGTTGAACC+TGG | + | chr4.4:84341020-84341039 | MS.gene057845:CDS | 40.0% |
! | TTTGGTTGATGCAGGTATTG+TGG | + | chr4.4:84341752-84341771 | MS.gene057845:intron | 40.0% |
!! | AAGAAGGCATTAGAGGTTAC+TGG | + | chr4.4:84340447-84340466 | MS.gene057845:CDS | 40.0% |
!! | ATTCGTTGTTCGGTTTGGTT+TGG | - | chr4.4:84338161-84338180 | None:intergenic | 40.0% |
!! | CGTTGGTAGTTAATTGGTTG+TGG | + | chr4.4:84339005-84339024 | MS.gene057845:intron | 40.0% |
!! | GAAAGTGCCAAGAAGACAAT+TGG | + | chr4.4:84338440-84338459 | MS.gene057845:CDS | 40.0% |
!! | TTCGTTGTTCGGTTTGGTTT+GGG | - | chr4.4:84338160-84338179 | None:intergenic | 40.0% |
!!! | TCTGGTTTTTTGCAGACTCA+TGG | + | chr4.4:84338401-84338420 | MS.gene057845:intron | 40.0% |
AACGATGAGCTCTCTGTTGT+CGG | + | chr4.4:84340728-84340747 | MS.gene057845:CDS | 45.0% | |
AAGGCAAGTTGTGCATGAGA+TGG | - | chr4.4:84339912-84339931 | None:intergenic | 45.0% | |
ACTCAGGAATGCTCTAGCAT+AGG | - | chr4.4:84339349-84339368 | None:intergenic | 45.0% | |
AGGCATTAGAGGTTACTGGA+AGG | + | chr4.4:84340451-84340470 | MS.gene057845:CDS | 45.0% | |
CAATATGTACGACTTGCCTC+TGG | + | chr4.4:84340126-84340145 | MS.gene057845:intron | 45.0% | |
CACACTTACATGCTATCCTC+TGG | + | chr4.4:84341425-84341444 | MS.gene057845:CDS | 45.0% | |
CAGAGGATAGCATGTAAGTG+TGG | - | chr4.4:84341427-84341446 | None:intergenic | 45.0% | |
CCTGATGCTGCAAAAACACA+AGG | - | chr4.4:84342110-84342129 | None:intergenic | 45.0% | |
CTGCCGATGGAATTGTGAAT+AGG | + | chr4.4:84339416-84339435 | MS.gene057845:intron | 45.0% | |
CTTCACGTATAACCCAAGCA+CGG | - | chr4.4:84338933-84338952 | None:intergenic | 45.0% | |
GAATTTGGAAGGAATGGTGG+TGG | - | chr4.4:84338121-84338140 | None:intergenic | 45.0% | |
GAGTTGTTGAAGAGGTGGTT+GGG | - | chr4.4:84338075-84338094 | None:intergenic | 45.0% | |
GATCACAAGTACCTGCTGTT+TGG | - | chr4.4:84341837-84341856 | None:intergenic | 45.0% | |
GGAGCTATTCCGATAAGAGA+AGG | - | chr4.4:84341196-84341215 | None:intergenic | 45.0% | |
GGCATTAGAGGTTACTGGAA+GGG | + | chr4.4:84340452-84340471 | MS.gene057845:CDS | 45.0% | |
GGCCATATCAATGATAGGGA+AGG | + | chr4.4:84340424-84340443 | MS.gene057845:intron | 45.0% | |
GGGCCTATTCACAATTCCAT+CGG | - | chr4.4:84339422-84339441 | None:intergenic | 45.0% | |
GTGGCACAAGATGGAGTTAT+TGG | + | chr4.4:84341771-84341790 | MS.gene057845:CDS | 45.0% | |
GTTAGAGGAGGTGGTTAAGT+TGG | - | chr4.4:84338040-84338059 | None:intergenic | 45.0% | |
TATCTAGTGATGCTCACCTG+TGG | - | chr4.4:84340485-84340504 | None:intergenic | 45.0% | |
TATTGTCAAGGAGTTTGGGG+AGG | - | chr4.4:84340311-84340330 | None:intergenic | 45.0% | |
TCGAATCAAGCTTCTCATGC+AGG | + | chr4.4:84338311-84338330 | MS.gene057845:CDS | 45.0% | |
TCTAGAAGGAGGGGAACATT+TGG | - | chr4.4:84339476-84339495 | None:intergenic | 45.0% | |
TGAAGGTGGAGTTGTTGAAG+AGG | - | chr4.4:84338083-84338102 | None:intergenic | 45.0% | |
TTCCGATAAGAGAAGGACCA+AGG | - | chr4.4:84341189-84341208 | None:intergenic | 45.0% | |
TTCCTCTCTTACCATGCTCA+AGG | - | chr4.4:84341143-84341162 | None:intergenic | 45.0% | |
TTGAGCATGGTAAGAGAGGA+AGG | + | chr4.4:84341142-84341161 | MS.gene057845:CDS | 45.0% | |
TTTAGGAACAAGTGCGACGA+CGG | - | chr4.4:84338223-84338242 | None:intergenic | 45.0% | |
TTTATAGGTCGCCTTGAGCA+TGG | + | chr4.4:84341129-84341148 | MS.gene057845:intron | 45.0% | |
! | ACAAGTACCTGCTGTTTGGT+AGG | - | chr4.4:84341833-84341852 | None:intergenic | 45.0% |
! | TAGAGGAGGTGGTTAAGTTG+GGG | - | chr4.4:84338038-84338057 | None:intergenic | 45.0% |
!! | AAGCATTGGGCACAAATCCT+CGG | - | chr4.4:84341803-84341822 | None:intergenic | 45.0% |
!! | ATAGATGTGGCTCTAGAAGG+AGG | - | chr4.4:84339487-84339506 | None:intergenic | 45.0% |
!! | CCTTGTGTTTTTGCAGCATC+AGG | + | chr4.4:84342107-84342126 | MS.gene057845:intron | 45.0% |
!! | TAGATGTGGCTCTAGAAGGA+GGG | - | chr4.4:84339486-84339505 | None:intergenic | 45.0% |
!! | ATCTTATATAAAAAAATATA+AGG | + | chr4.4:84339804-84339823 | MS.gene057845:intron | 5.0% |
AGGTGGAGTTGTTGAAGAGG+TGG | - | chr4.4:84338080-84338099 | None:intergenic | 50.0% | |
AGTAGCTGCAGAGCTTGCAA+AGG | - | chr4.4:84339319-84339338 | None:intergenic | 50.0% | |
ATAGATACGGACACGGACAC+GGG | + | chr4.4:84339960-84339979 | MS.gene057845:intron | 50.0% | |
CAAGCTCTGCAGCTACTGAT+AGG | + | chr4.4:84339322-84339341 | MS.gene057845:intron | 50.0% | |
CAGACTCATGGAGTGCGAAT+TGG | + | chr4.4:84338413-84338432 | MS.gene057845:intron | 50.0% | |
CATAGATACGGACACGGACA+CGG | + | chr4.4:84339959-84339978 | MS.gene057845:intron | 50.0% | |
CCTGATTGCTGCTAGTGAGA+AGG | + | chr4.4:84342156-84342175 | MS.gene057845:CDS | 50.0% | |
CCTTCTCACTAGCAGCAATC+AGG | - | chr4.4:84342159-84342178 | None:intergenic | 50.0% | |
GCTTCTTTCTACTACGGCCT+TGG | + | chr4.4:84341169-84341188 | MS.gene057845:CDS | 50.0% | |
GGAGTTGTTGAAGAGGTGGT+TGG | - | chr4.4:84338076-84338095 | None:intergenic | 50.0% | |
GGCAAGAGATGCTGAAAGCA+CGG | - | chr4.4:84341406-84341425 | None:intergenic | 50.0% | |
GGCCTTGGTCCTTCTCTTAT+CGG | + | chr4.4:84341184-84341203 | MS.gene057845:CDS | 50.0% | |
GGCGAATTCGTTGTTCGGTT+TGG | - | chr4.4:84338166-84338185 | None:intergenic | 50.0% | |
GGCGAATTTGGAAGGAATGG+TGG | - | chr4.4:84338124-84338143 | None:intergenic | 50.0% | |
GGTGGCGAATTTGGAAGGAA+TGG | - | chr4.4:84338127-84338146 | None:intergenic | 50.0% | |
TAGTGATGCTCACCTGTGGT+AGG | - | chr4.4:84340481-84340500 | None:intergenic | 50.0% | |
TATGAAGCACGGACACTCCT+CGG | - | chr4.4:84340102-84340121 | None:intergenic | 50.0% | |
TCGATCAAGTGGAGCAGTGA+CGG | - | chr4.4:84338295-84338314 | None:intergenic | 50.0% | |
TCTGTCATTGTTCGACACCC+AGG | - | chr4.4:84341041-84341060 | None:intergenic | 50.0% | |
TGAAACGACGTCGTTAGAGG+AGG | - | chr4.4:84338052-84338071 | None:intergenic | 50.0% | |
TGTCTTCGTACTGTGTCCAG+AGG | - | chr4.4:84341444-84341463 | None:intergenic | 50.0% | |
TTAAGAAGCTGAGCTGGCGT+CGG | - | chr4.4:84338189-84338208 | None:intergenic | 50.0% | |
! | GATGCTGCATTGTTTCTCGC+CGG | + | chr4.4:84338243-84338262 | MS.gene057845:CDS | 50.0% |
! | GCAGGTATTGTGGCACAAGA+TGG | + | chr4.4:84341762-84341781 | MS.gene057845:intron | 50.0% |
!! | AGATGTGGCTCTAGAAGGAG+GGG | - | chr4.4:84339485-84339504 | None:intergenic | 50.0% |
!! | GGAGTTATTGGCTTGTACCG+AGG | + | chr4.4:84341783-84341802 | MS.gene057845:CDS | 50.0% |
!! | GGGAAGGAAGAAGGCATTAG+AGG | + | chr4.4:84340440-84340459 | MS.gene057845:CDS | 50.0% |
!! | GTTGTTCGGTTTGGTTTGGG+AGG | - | chr4.4:84338157-84338176 | None:intergenic | 50.0% |
!! | TGGGTGTCGAACAATGACAG+AGG | + | chr4.4:84341040-84341059 | MS.gene057845:CDS | 50.0% |
AACGACGTCGTTAGAGGAGG+TGG | - | chr4.4:84338049-84338068 | None:intergenic | 55.0% | |
CGCCTTGAGCATGGTAAGAG+AGG | + | chr4.4:84341138-84341157 | MS.gene057845:CDS | 55.0% | |
CTGGAAGGGTAACCTACCAC+AGG | + | chr4.4:84340466-84340485 | MS.gene057845:CDS | 55.0% | |
GAGACGGTGGCGAATTTGGA+AGG | - | chr4.4:84338132-84338151 | None:intergenic | 55.0% | |
GGGTGAAACGACGTCGTTAG+AGG | - | chr4.4:84338055-84338074 | None:intergenic | 55.0% | |
GGGTGGTTAAGAAGCTGAGC+TGG | - | chr4.4:84338195-84338214 | None:intergenic | 55.0% | |
GTCGGGGCGAATTCGTTGTT+CGG | - | chr4.4:84338171-84338190 | None:intergenic | 55.0% | |
GTTGTCGGAAGACTTGCAGC+AGG | + | chr4.4:84340743-84340762 | MS.gene057845:CDS | 55.0% | |
TAAGAAGCTGAGCTGGCGTC+GGG | - | chr4.4:84338188-84338207 | None:intergenic | 55.0% | |
! | ACTGTCGGTTATGCCGTGCT+TGG | + | chr4.4:84338917-84338936 | MS.gene057845:intron | 55.0% |
! | CTGTCGGTTATGCCGTGCTT+GGG | + | chr4.4:84338918-84338937 | MS.gene057845:intron | 55.0% |
! | CTTGCAGCAGGTGCTTTTGC+AGG | + | chr4.4:84340755-84340774 | MS.gene057845:CDS | 55.0% |
! | GGTTGCGTCGGTGAAAGTGA+AGG | - | chr4.4:84338100-84338119 | None:intergenic | 55.0% |
! | TGCGTCGGTGAAAGTGAAGG+TGG | - | chr4.4:84338097-84338116 | None:intergenic | 55.0% |
!! | AGGAATGGTGGTGGTTGCGT+CGG | - | chr4.4:84338112-84338131 | None:intergenic | 55.0% |
!! | GAGGAGTGTCCGTGCTTCAT+AGG | + | chr4.4:84340101-84340120 | MS.gene057845:intron | 55.0% |
!! | GTTCGGTTTGGTTTGGGAGG+CGG | - | chr4.4:84338154-84338173 | None:intergenic | 55.0% |
!! | TTTGGTTTGGGAGGCGGAGA+CGG | - | chr4.4:84338148-84338167 | None:intergenic | 55.0% |
AAGAAGCTGAGCTGGCGTCG+GGG | - | chr4.4:84338187-84338206 | None:intergenic | 60.0% | |
ACAAGTGCGACGACGGCGAT+CGG | - | chr4.4:84338216-84338235 | None:intergenic | 60.0% | |
AGCACGGACACTCCTCGGAT+TGG | - | chr4.4:84340097-84340116 | None:intergenic | 60.0% | |
AGCAGCTCCAGCAACAGCAC+CGG | - | chr4.4:84338265-84338284 | None:intergenic | 60.0% | |
CGAACAAAACCGTCGCCACG+TGG | + | chr4.4:84338004-84338023 | MS.gene057845:CDS | 60.0% | |
CTCAGAGCATGCTCTGCCGA+TGG | + | chr4.4:84339403-84339422 | MS.gene057845:intron | 60.0% | |
TCGTATCGCGTGTCCGACAC+CGG | + | chr4.4:84340064-84340083 | MS.gene057845:intron | 60.0% | |
!! | TTTCTCGCCGGTGCTGTTGC+TGG | + | chr4.4:84338255-84338274 | MS.gene057845:CDS | 60.0% |
CAAGTGCGACGACGGCGATC+GGG | - | chr4.4:84338215-84338234 | None:intergenic | 65.0% | |
CACGGACACGGGACACGACA+CGG | + | chr4.4:84339971-84339990 | MS.gene057845:intron | 65.0% | |
CGTATCGCGTGTCCGACACC+GGG | + | chr4.4:84340065-84340084 | MS.gene057845:intron | 65.0% | |
GATGTTGCGCCACGTGGCGA+CGG | - | chr4.4:84338016-84338035 | None:intergenic | 65.0% | |
GGCGGAGACGGTGGCGAATT+TGG | - | chr4.4:84338136-84338155 | None:intergenic | 65.0% | |
GTTGGGGATGTTGCGCCACG+TGG | - | chr4.4:84338022-84338041 | None:intergenic | 65.0% | |
! | GATTGGCCGTGTCCCGGTGT+CGG | - | chr4.4:84340080-84340099 | None:intergenic | 65.0% |
!! | TCCTCGGATTGGCCGTGTCC+CGG | - | chr4.4:84340086-84340105 | None:intergenic | 65.0% |
ACCGGGACACGGCCAATCCG+AGG | + | chr4.4:84340082-84340101 | MS.gene057845:intron | 70.0% | |
GCGTGTCCGACACCGGGACA+CGG | + | chr4.4:84340071-84340090 | MS.gene057845:intron | 70.0% | |
GGTTTGGGAGGCGGAGACGG+TGG | - | chr4.4:84338145-84338164 | None:intergenic | 70.0% | |
GTGCGACGACGGCGATCGGG+TGG | - | chr4.4:84338212-84338231 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 84337991 | 84342231 | 84337991 | ID=MS.gene057845 |
chr4.4 | mRNA | 84337991 | 84342231 | 84337991 | ID=MS.gene057845.t1;Parent=MS.gene057845 |
chr4.4 | exon | 84337991 | 84338332 | 84337991 | ID=MS.gene057845.t1.exon1;Parent=MS.gene057845.t1 |
chr4.4 | CDS | 84337991 | 84338332 | 84337991 | ID=cds.MS.gene057845.t1;Parent=MS.gene057845.t1 |
chr4.4 | exon | 84338416 | 84338472 | 84338416 | ID=MS.gene057845.t1.exon2;Parent=MS.gene057845.t1 |
chr4.4 | CDS | 84338416 | 84338472 | 84338416 | ID=cds.MS.gene057845.t1;Parent=MS.gene057845.t1 |
chr4.4 | exon | 84340425 | 84340487 | 84340425 | ID=MS.gene057845.t1.exon3;Parent=MS.gene057845.t1 |
chr4.4 | CDS | 84340425 | 84340487 | 84340425 | ID=cds.MS.gene057845.t1;Parent=MS.gene057845.t1 |
chr4.4 | exon | 84340572 | 84340628 | 84340572 | ID=MS.gene057845.t1.exon4;Parent=MS.gene057845.t1 |
chr4.4 | CDS | 84340572 | 84340628 | 84340572 | ID=cds.MS.gene057845.t1;Parent=MS.gene057845.t1 |
chr4.4 | exon | 84340710 | 84340793 | 84340710 | ID=MS.gene057845.t1.exon5;Parent=MS.gene057845.t1 |
chr4.4 | CDS | 84340710 | 84340793 | 84340710 | ID=cds.MS.gene057845.t1;Parent=MS.gene057845.t1 |
chr4.4 | exon | 84340993 | 84341061 | 84340993 | ID=MS.gene057845.t1.exon6;Parent=MS.gene057845.t1 |
chr4.4 | CDS | 84340993 | 84341061 | 84340993 | ID=cds.MS.gene057845.t1;Parent=MS.gene057845.t1 |
chr4.4 | exon | 84341136 | 84341248 | 84341136 | ID=MS.gene057845.t1.exon7;Parent=MS.gene057845.t1 |
chr4.4 | CDS | 84341136 | 84341248 | 84341136 | ID=cds.MS.gene057845.t1;Parent=MS.gene057845.t1 |
chr4.4 | exon | 84341344 | 84341513 | 84341344 | ID=MS.gene057845.t1.exon8;Parent=MS.gene057845.t1 |
chr4.4 | CDS | 84341344 | 84341513 | 84341344 | ID=cds.MS.gene057845.t1;Parent=MS.gene057845.t1 |
chr4.4 | exon | 84341766 | 84341844 | 84341766 | ID=MS.gene057845.t1.exon9;Parent=MS.gene057845.t1 |
chr4.4 | CDS | 84341766 | 84341844 | 84341766 | ID=cds.MS.gene057845.t1;Parent=MS.gene057845.t1 |
chr4.4 | exon | 84342123 | 84342231 | 84342123 | ID=MS.gene057845.t1.exon10;Parent=MS.gene057845.t1 |
chr4.4 | CDS | 84342123 | 84342231 | 84342123 | ID=cds.MS.gene057845.t1;Parent=MS.gene057845.t1 |
Gene Sequence |
Protein sequence |