Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057771.t1 | XP_003607178.1 | 92.8 | 419 | 16 | 2 | 1 | 419 | 1 | 405 | 4.20E-174 | 620.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057771.t1 | O22469 | 58.4 | 397 | 146 | 4 | 17 | 406 | 17 | 401 | 8.3e-102 | 372.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057771.t1 | G7JMD2 | 92.8 | 419 | 16 | 2 | 1 | 419 | 1 | 405 | 3.1e-174 | 620.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051263 | MS.gene057771 | 0.808879 | 2.49E-50 | -1.69E-46 |
| MS.gene051629 | MS.gene057771 | 0.820721 | 5.91E-53 | -1.69E-46 |
| MS.gene057771 | MS.gene062996 | 0.967689 | 1.27E-127 | -1.69E-46 |
| MS.gene057771 | MS.gene24543 | 0.808345 | 3.24E-50 | -1.69E-46 |
| MS.gene057771 | MS.gene37037 | 0.828161 | 1.05E-54 | -1.69E-46 |
| MS.gene057771 | MS.gene57219 | 0.828858 | 7.12E-55 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057771.t1 | MTR_4g073080 | 94.749 | 419 | 8 | 2 | 1 | 419 | 1 | 405 | 0.0 | 805 |
| MS.gene057771.t1 | MTR_4g096880 | 53.634 | 399 | 172 | 5 | 19 | 409 | 21 | 414 | 8.34e-143 | 414 |
| MS.gene057771.t1 | MTR_2g039250 | 29.519 | 437 | 255 | 10 | 13 | 409 | 56 | 479 | 5.51e-57 | 195 |
| MS.gene057771.t1 | MTR_2g100090 | 28.251 | 446 | 255 | 12 | 15 | 409 | 17 | 448 | 1.22e-47 | 169 |
| MS.gene057771.t1 | MTR_8g080700 | 28.188 | 298 | 181 | 7 | 123 | 391 | 157 | 450 | 1.26e-28 | 117 |
| MS.gene057771.t1 | MTR_5g024090 | 28.146 | 302 | 177 | 12 | 123 | 391 | 151 | 445 | 8.66e-23 | 100 |
| MS.gene057771.t1 | MTR_2g016160 | 25.837 | 209 | 146 | 3 | 142 | 350 | 75 | 274 | 3.86e-18 | 85.1 |
| MS.gene057771.t1 | MTR_6g004040 | 32.524 | 206 | 120 | 9 | 167 | 368 | 50 | 240 | 2.21e-15 | 79.0 |
| MS.gene057771.t1 | MTR_5g016350 | 27.572 | 243 | 124 | 9 | 172 | 369 | 331 | 566 | 2.66e-13 | 72.0 |
| MS.gene057771.t1 | MTR_5g016350 | 27.572 | 243 | 124 | 9 | 172 | 369 | 267 | 502 | 2.80e-13 | 72.0 |
| MS.gene057771.t1 | MTR_3g115200 | 26.131 | 199 | 139 | 5 | 197 | 391 | 141 | 335 | 3.19e-12 | 67.8 |
| MS.gene057771.t1 | MTR_5g085250 | 26.667 | 210 | 139 | 6 | 139 | 344 | 383 | 581 | 5.73e-12 | 68.2 |
| MS.gene057771.t1 | MTR_4g095058 | 24.370 | 238 | 146 | 9 | 172 | 401 | 326 | 537 | 6.19e-12 | 67.8 |
| MS.gene057771.t1 | MTR_4g095058 | 24.370 | 238 | 146 | 9 | 172 | 401 | 324 | 535 | 6.34e-12 | 67.8 |
| MS.gene057771.t1 | MTR_5g085250 | 26.667 | 210 | 139 | 6 | 139 | 344 | 246 | 444 | 7.14e-12 | 67.4 |
| MS.gene057771.t1 | MTR_5g085250 | 26.667 | 210 | 139 | 6 | 139 | 344 | 279 | 477 | 7.34e-12 | 67.4 |
| MS.gene057771.t1 | MTR_5g016370 | 29.851 | 134 | 83 | 4 | 218 | 343 | 423 | 553 | 1.14e-11 | 67.0 |
| MS.gene057771.t1 | MTR_7g086360 | 25.909 | 220 | 146 | 8 | 125 | 342 | 49 | 253 | 6.89e-11 | 63.5 |
| MS.gene057771.t1 | MTR_2g012630 | 30.412 | 194 | 115 | 9 | 192 | 377 | 73 | 254 | 7.51e-11 | 64.7 |
| MS.gene057771.t1 | MTR_2g012630 | 30.412 | 194 | 115 | 9 | 192 | 377 | 73 | 254 | 8.30e-11 | 64.7 |
| MS.gene057771.t1 | MTR_3g045130 | 32.000 | 150 | 93 | 4 | 191 | 340 | 370 | 510 | 8.45e-11 | 64.3 |
| MS.gene057771.t1 | MTR_4g045577 | 27.222 | 180 | 116 | 5 | 172 | 341 | 118 | 292 | 9.41e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057771.t1 | AT4G35050 | 61.165 | 412 | 141 | 4 | 1 | 405 | 1 | 400 | 0.0 | 527 |
| MS.gene057771.t1 | AT2G16780 | 62.019 | 416 | 138 | 5 | 1 | 409 | 1 | 403 | 0.0 | 526 |
| MS.gene057771.t1 | AT5G58230 | 52.854 | 403 | 177 | 4 | 15 | 409 | 17 | 414 | 2.62e-147 | 425 |
| MS.gene057771.t1 | AT2G19520 | 29.018 | 448 | 258 | 9 | 3 | 405 | 52 | 484 | 1.51e-56 | 194 |
| MS.gene057771.t1 | AT4G29730 | 27.293 | 447 | 255 | 10 | 8 | 409 | 47 | 468 | 6.56e-49 | 173 |
| MS.gene057771.t1 | AT4G29730 | 27.182 | 401 | 227 | 11 | 8 | 369 | 47 | 421 | 1.69e-39 | 147 |
| MS.gene057771.t1 | AT4G29730 | 27.182 | 401 | 227 | 11 | 8 | 369 | 47 | 421 | 1.69e-39 | 147 |
| MS.gene057771.t1 | AT2G19540 | 31.353 | 303 | 169 | 10 | 122 | 391 | 153 | 449 | 2.34e-32 | 128 |
| MS.gene057771.t1 | AT1G29260 | 26.857 | 175 | 122 | 1 | 167 | 341 | 97 | 265 | 4.42e-17 | 82.0 |
| MS.gene057771.t1 | AT5G08390 | 28.230 | 209 | 126 | 6 | 190 | 398 | 72 | 256 | 4.30e-15 | 78.2 |
| MS.gene057771.t1 | AT5G23430 | 28.019 | 207 | 125 | 6 | 192 | 398 | 74 | 256 | 3.57e-14 | 75.1 |
| MS.gene057771.t1 | AT5G23430 | 28.019 | 207 | 125 | 6 | 192 | 398 | 74 | 256 | 3.60e-14 | 75.1 |
| MS.gene057771.t1 | AT5G23430 | 28.019 | 207 | 125 | 6 | 192 | 398 | 74 | 256 | 3.60e-14 | 75.1 |
| MS.gene057771.t1 | AT5G67320 | 25.630 | 238 | 143 | 9 | 172 | 401 | 361 | 572 | 2.55e-13 | 72.4 |
| MS.gene057771.t1 | AT1G20540 | 27.545 | 167 | 111 | 4 | 232 | 392 | 175 | 337 | 3.50e-13 | 70.9 |
| MS.gene057771.t1 | AT3G63460 | 24.206 | 252 | 161 | 7 | 172 | 413 | 118 | 349 | 7.83e-13 | 71.2 |
| MS.gene057771.t1 | AT2G32950 | 29.193 | 161 | 105 | 3 | 182 | 342 | 313 | 464 | 8.31e-13 | 70.5 |
| MS.gene057771.t1 | AT3G63460 | 24.206 | 252 | 161 | 7 | 172 | 413 | 118 | 349 | 8.47e-13 | 70.9 |
| MS.gene057771.t1 | AT3G63460 | 24.206 | 252 | 161 | 7 | 172 | 413 | 118 | 349 | 8.68e-13 | 70.9 |
| MS.gene057771.t1 | AT2G32950 | 29.193 | 161 | 105 | 3 | 182 | 342 | 426 | 577 | 9.75e-13 | 70.5 |
| MS.gene057771.t1 | AT4G35370 | 22.422 | 223 | 144 | 3 | 186 | 400 | 177 | 378 | 3.23e-12 | 68.2 |
| MS.gene057771.t1 | AT4G11110 | 29.268 | 164 | 107 | 3 | 181 | 344 | 777 | 931 | 4.07e-12 | 68.9 |
| MS.gene057771.t1 | AT5G13480 | 31.544 | 149 | 93 | 4 | 192 | 340 | 222 | 361 | 1.56e-11 | 66.6 |
| MS.gene057771.t1 | AT5G13480 | 31.544 | 149 | 93 | 4 | 192 | 340 | 210 | 349 | 1.56e-11 | 66.6 |
| MS.gene057771.t1 | AT5G13480 | 31.544 | 149 | 93 | 4 | 192 | 340 | 210 | 349 | 1.68e-11 | 66.6 |
| MS.gene057771.t1 | AT5G13480 | 31.544 | 149 | 93 | 4 | 192 | 340 | 233 | 372 | 1.72e-11 | 66.6 |
| MS.gene057771.t1 | AT1G61210 | 30.464 | 151 | 95 | 5 | 192 | 342 | 73 | 213 | 2.46e-11 | 66.2 |
| MS.gene057771.t1 | AT1G61210 | 30.464 | 151 | 95 | 5 | 192 | 342 | 73 | 213 | 2.63e-11 | 66.2 |
| MS.gene057771.t1 | AT1G61210 | 30.464 | 151 | 95 | 5 | 192 | 342 | 73 | 213 | 2.70e-11 | 66.2 |
| MS.gene057771.t1 | AT1G11160 | 30.464 | 151 | 95 | 6 | 192 | 342 | 31 | 171 | 3.24e-11 | 65.9 |
| MS.gene057771.t1 | AT1G11160 | 30.464 | 151 | 95 | 6 | 192 | 342 | 73 | 213 | 3.50e-11 | 65.9 |
| MS.gene057771.t1 | AT1G11160 | 30.464 | 151 | 95 | 6 | 192 | 342 | 73 | 213 | 3.54e-11 | 65.9 |
| MS.gene057771.t1 | AT1G11160 | 30.464 | 151 | 95 | 6 | 192 | 342 | 73 | 213 | 3.75e-11 | 65.9 |
Find 126 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGACTGCAAGTTGGTAATT+TGG | 0.200192 | 4.4:-36464211 | MS.gene057771:CDS |
| GAGGAGTTTGTGGAGGTTAA+AGG | 0.205640 | 4.4:+36464936 | None:intergenic |
| GACGGGTTGAGATGGGTTTC+CGG | 0.242362 | 4.4:+36464852 | None:intergenic |
| TTCAGCGAGCATGAGGTAAT+TGG | 0.242797 | 4.4:+36464885 | None:intergenic |
| AAATTACCCATGGCTGGTTT+TGG | 0.254020 | 4.4:+36462916 | None:intergenic |
| TAATGGTTTGGGACCTTAAC+AGG | 0.280289 | 4.4:-36463211 | MS.gene057771:intron |
| TTGCATAATGAGAATTTGTT+TGG | 0.282089 | 4.4:-36464245 | MS.gene057771:CDS |
| ACGGGTTGAGATGGGTTTCC+GGG | 0.287427 | 4.4:+36464853 | None:intergenic |
| TGACTGCAAGTTGGTAATTT+GGG | 0.320876 | 4.4:-36464210 | MS.gene057771:CDS |
| GAAGAGTTGGAGTGGGGTTG+AGG | 0.330665 | 4.4:+36464958 | None:intergenic |
| CATGGGGTTTGAGTGAATGC+TGG | 0.337025 | 4.4:+36464168 | None:intergenic |
| GCCAAAATCCATTCACTATA+CGG | 0.342837 | 4.4:+36463577 | None:intergenic |
| GGCCTTCCCTTACTGTTCAA+TGG | 0.344219 | 4.4:-36464993 | MS.gene057771:CDS |
| TGTTGATGGGGAGGTGAATA+GGG | 0.344389 | 4.4:-36464681 | MS.gene057771:CDS |
| ACATCGGTCTCTTTGATTTA+CGG | 0.356527 | 4.4:-36463534 | MS.gene057771:CDS |
| TTGTTGATGGGGAGGTGAAT+AGG | 0.360369 | 4.4:-36464682 | MS.gene057771:CDS |
| TCCGTATAGTGAATGGATTT+TGG | 0.364343 | 4.4:-36463578 | MS.gene057771:CDS |
| CTGATAGAAGGCTAATGGTT+TGG | 0.371708 | 4.4:-36463223 | MS.gene057771:CDS |
| ACACCATTACCTCTCTTTCA+TGG | 0.392547 | 4.4:+36464150 | None:intergenic |
| GGGTGGCGAGGAGGAGTTTG+TGG | 0.394964 | 4.4:+36464926 | None:intergenic |
| CACCATTACCTCTCTTTCAT+GGG | 0.396455 | 4.4:+36464151 | None:intergenic |
| CTTTCAGTCCGTATAGTGAA+TGG | 0.398232 | 4.4:-36463585 | MS.gene057771:CDS |
| AGGATAATTCTTTCCATGTC+TGG | 0.402026 | 4.4:-36462881 | MS.gene057771:CDS |
| CCATGAGAGAAGAGTAGTTC+GGG | 0.404136 | 4.4:+36462975 | None:intergenic |
| TGATAGAAGGCTAATGGTTT+GGG | 0.415888 | 4.4:-36463222 | MS.gene057771:CDS |
| ACTCAGAGGATTCTTGTTGA+TGG | 0.422181 | 4.4:-36464695 | MS.gene057771:CDS |
| TAGTGCTGATAGAAGGCTAA+TGG | 0.425058 | 4.4:-36463228 | MS.gene057771:CDS |
| TGCATAATGAGAATTTGTTT+GGG | 0.426082 | 4.4:-36464244 | MS.gene057771:CDS |
| CTCAGAGGATTCTTGTTGAT+GGG | 0.427906 | 4.4:-36464694 | MS.gene057771:CDS |
| GTGTAGAGATGAGGTATTCC+AGG | 0.429704 | 4.4:-36463291 | MS.gene057771:intron |
| AGCCTTCTTCTAGTTAGTGC+TGG | 0.431392 | 4.4:+36462799 | None:intergenic |
| TTCTTTCCATGTCTGGCAAA+TGG | 0.431405 | 4.4:-36462874 | MS.gene057771:CDS |
| ATTTGCTTGTGGGATGTGTT+TGG | 0.433764 | 4.4:-36464458 | MS.gene057771:CDS |
| AATGAGAATTTGTTTGGGTC+TGG | 0.440769 | 4.4:-36464239 | MS.gene057771:CDS |
| TTCAGGATCTGCAGCGATGA+CGG | 0.441099 | 4.4:+36464834 | None:intergenic |
| CACTTGAAATTACCCATGGC+TGG | 0.444884 | 4.4:+36462910 | None:intergenic |
| TCAGCGAGCATGAGGTAATT+GGG | 0.453601 | 4.4:+36464886 | None:intergenic |
| CATCTTCTAGTGCTGATAGA+AGG | 0.454542 | 4.4:-36463235 | MS.gene057771:CDS |
| AAGAAGGGTATGGGCTGTCT+TGG | 0.455286 | 4.4:-36464529 | MS.gene057771:CDS |
| TGACCCTTCAACCTAAAATC+AGG | 0.455708 | 4.4:+36464557 | None:intergenic |
| TTGAAGAAGAATTCTCCGTT+TGG | 0.456868 | 4.4:-36465068 | MS.gene057771:CDS |
| TGATGCTGTTCATGTTTATG+AGG | 0.456896 | 4.4:-36464414 | MS.gene057771:intron |
| AGTTGGTAATTTGGGATTTG+CGG | 0.462658 | 4.4:-36464202 | MS.gene057771:CDS |
| GTGGAGGTTAAAGGAAGAGT+TGG | 0.463186 | 4.4:+36464945 | None:intergenic |
| ATGGCGATGATGACAACAAT+TGG | 0.467987 | 4.4:-36462833 | MS.gene057771:CDS |
| ATGGGGAGGTGAATAGGGCT+CGG | 0.471067 | 4.4:-36464676 | MS.gene057771:CDS |
| GAGTGGGGTTGAGGAGGTGA+AGG | 0.476171 | 4.4:+36464967 | None:intergenic |
| CTGATAGAGGGAGATGAAGA+AGG | 0.477552 | 4.4:-36463005 | MS.gene057771:CDS |
| TCCATGAGAGAAGAGTAGTT+CGG | 0.477596 | 4.4:+36462974 | None:intergenic |
| GGTTAGGATCCCACTCTACC+TGG | 0.480679 | 4.4:+36463273 | None:intergenic |
| TTTACTAAGGAGAGAGGGGA+GGG | 0.481005 | 4.4:-36464587 | MS.gene057771:CDS |
| GCCAACACTCCCTCGTGGTT+AGG | 0.483885 | 4.4:+36463257 | None:intergenic |
| ATGAAGAGATCGTAGAGAAG+AGG | 0.487047 | 4.4:+36465033 | None:intergenic |
| TGAAGGGTCATGAGAAAGAA+GGG | 0.487057 | 4.4:-36464544 | MS.gene057771:CDS |
| GATTGGGGATGAGCTGATAG+AGG | 0.487572 | 4.4:-36463018 | MS.gene057771:CDS |
| TCAGGATCTGCAGCGATGAC+GGG | 0.487640 | 4.4:+36464835 | None:intergenic |
| CAGCGATGACGGGTTGAGAT+GGG | 0.493487 | 4.4:+36464845 | None:intergenic |
| GAGTTGGAGTGGGGTTGAGG+AGG | 0.500046 | 4.4:+36464961 | None:intergenic |
| TGGGTTCTTCATCGGAAGTG+TGG | 0.501819 | 4.4:+36464905 | None:intergenic |
| ATGGGGTTTGAGTGAATGCT+GGG | 0.505125 | 4.4:+36464169 | None:intergenic |
| CCCGAACTACTCTTCTCTCA+TGG | 0.505384 | 4.4:-36462975 | MS.gene057771:CDS |
| TTGAAGGGTCATGAGAAAGA+AGG | 0.507504 | 4.4:-36464545 | MS.gene057771:CDS |
| GCAGCGATGACGGGTTGAGA+TGG | 0.508458 | 4.4:+36464844 | None:intergenic |
| TGATCATAAGATTTGCTTGT+GGG | 0.509495 | 4.4:-36464468 | MS.gene057771:CDS |
| GAGGTAATTGGGTTCTTCAT+CGG | 0.512602 | 4.4:+36464897 | None:intergenic |
| GGTCATGAGAAAGAAGGGTA+TGG | 0.513903 | 4.4:-36464539 | MS.gene057771:CDS |
| AAGGAAGCCATTGAACAGTA+AGG | 0.522364 | 4.4:+36464986 | None:intergenic |
| CATGGAACCAAAACCAGCCA+TGG | 0.522424 | 4.4:-36462923 | MS.gene057771:CDS |
| TGAAAACCCTATTCTTCCAA+AGG | 0.526040 | 4.4:-36464815 | MS.gene057771:CDS |
| CTCGCTGAATCCACTCTCCC+CGG | 0.528576 | 4.4:-36464871 | MS.gene057771:CDS |
| ATGAGGTATTCCAGGTAGAG+TGG | 0.529343 | 4.4:-36463283 | MS.gene057771:CDS |
| TTTCAGCCATTTGCCAGACA+TGG | 0.531242 | 4.4:+36462868 | None:intergenic |
| AGATGGGTTTCCGGGGAGAG+TGG | 0.533865 | 4.4:+36464861 | None:intergenic |
| GAGAATTTGTTTGGGTCTGG+TGG | 0.535452 | 4.4:-36464236 | MS.gene057771:CDS |
| TCCTAACCACGAGGGAGTGT+TGG | 0.537952 | 4.4:-36463258 | MS.gene057771:CDS |
| AGGAGTGTTTCTCTTCCAAA+CGG | 0.545132 | 4.4:+36465053 | None:intergenic |
| GGGTATGGGCTGTCTTGGAG+TGG | 0.547685 | 4.4:-36464524 | MS.gene057771:CDS |
| TCATCTCACACCCTCTCGCA+TGG | 0.548562 | 4.4:-36465014 | MS.gene057771:CDS |
| TTCTCTCATGGAGGTCACAA+AGG | 0.553409 | 4.4:-36462963 | MS.gene057771:CDS |
| GTTAAAGGAAGAGTTGGAGT+GGG | 0.555334 | 4.4:+36464951 | None:intergenic |
| GGGTTCTTCATCGGAAGTGT+GGG | 0.556214 | 4.4:+36464906 | None:intergenic |
| TCAGAGGATTCTTGTTGATG+GGG | 0.558512 | 4.4:-36464693 | MS.gene057771:CDS |
| GCTGAAAGCATCTACAATGA+TGG | 0.565727 | 4.4:-36462852 | MS.gene057771:CDS |
| TGCGAAGACTTGTAATTCAG+AGG | 0.566003 | 4.4:-36464624 | MS.gene057771:CDS |
| CTTTGATTTACGGAAGCTTG+AGG | 0.566055 | 4.4:-36463524 | MS.gene057771:CDS |
| CGATGATGACAACAATTGGA+TGG | 0.567266 | 4.4:-36462829 | MS.gene057771:CDS |
| TTAAAGGAAGAGTTGGAGTG+GGG | 0.573089 | 4.4:+36464952 | None:intergenic |
| GTCATGAGAAAGAAGGGTAT+GGG | 0.577823 | 4.4:-36464538 | MS.gene057771:CDS |
| GAGGATTCTTGTTGATGGGG+AGG | 0.577872 | 4.4:-36464690 | MS.gene057771:CDS |
| TGGGGAGGTGAATAGGGCTC+GGG | 0.577992 | 4.4:-36464675 | MS.gene057771:CDS |
| TTCTTCATCGGAAGTGTGGG+TGG | 0.585703 | 4.4:+36464909 | None:intergenic |
| CATCGGAAGTGTGGGTGGCG+AGG | 0.587425 | 4.4:+36464914 | None:intergenic |
| CGGAAGTGTGGGTGGCGAGG+AGG | 0.592106 | 4.4:+36464917 | None:intergenic |
| ACCATTACCTCTCTTTCATG+GGG | 0.593239 | 4.4:+36464152 | None:intergenic |
| GGTAATTTCAAGTGTAGCTG+AGG | 0.595021 | 4.4:-36462901 | MS.gene057771:CDS |
| GCAACAACATTCGCATTCTG+TGG | 0.595065 | 4.4:+36464647 | None:intergenic |
| TTCATGATGACTCAGGATTG+GGG | 0.595806 | 4.4:-36463033 | MS.gene057771:intron |
| TAAGGGAAGGCCATGCGAGA+GGG | 0.598709 | 4.4:+36465004 | None:intergenic |
| GGTTAAAGGAAGAGTTGGAG+TGG | 0.603090 | 4.4:+36464950 | None:intergenic |
| TGAGGTATTCCAGGTAGAGT+GGG | 0.604028 | 4.4:-36463282 | MS.gene057771:CDS |
| CGGGTTGAGATGGGTTTCCG+GGG | 0.604951 | 4.4:+36464854 | None:intergenic |
| TGGCGAGGAGGAGTTTGTGG+AGG | 0.615770 | 4.4:+36464929 | None:intergenic |
| TAAATCAAAGAGACCGATGT+CGG | 0.616345 | 4.4:+36463537 | None:intergenic |
| GAGTGGATTCAGCGAGCATG+AGG | 0.617545 | 4.4:+36464878 | None:intergenic |
| TGAGAGAAGAGTAGTTCGGG+AGG | 0.620188 | 4.4:+36462978 | None:intergenic |
| ACTCAAACCCCATGAAAGAG+AGG | 0.622281 | 4.4:-36464159 | MS.gene057771:intron |
| ATTGGGGATGAGCTGATAGA+GGG | 0.628114 | 4.4:-36463017 | MS.gene057771:CDS |
| GTGTGGTTGAAGATGTGTCT+TGG | 0.629529 | 4.4:-36464271 | MS.gene057771:CDS |
| AGCCATTGAACAGTAAGGGA+AGG | 0.631871 | 4.4:+36464991 | None:intergenic |
| ATGGAACCAAAACCAGCCAT+GGG | 0.633074 | 4.4:-36462922 | MS.gene057771:CDS |
| GTAAGGGAAGGCCATGCGAG+AGG | 0.641787 | 4.4:+36465003 | None:intergenic |
| AGGAAGCCATTGAACAGTAA+GGG | 0.642100 | 4.4:+36464987 | None:intergenic |
| ATGATCATAAGATTTGCTTG+TGG | 0.642906 | 4.4:-36464469 | MS.gene057771:CDS |
| CGAAACCGAAAACGAAGCAG+AGG | 0.655685 | 4.4:-36465091 | MS.gene057771:CDS |
| GCTACACTTGAAATTACCCA+TGG | 0.657118 | 4.4:+36462906 | None:intergenic |
| GCATCTTCAGACACCGACAT+CGG | 0.660753 | 4.4:-36463550 | MS.gene057771:CDS |
| GTGTTAGGGACATGAAAGTG+TGG | 0.665723 | 4.4:-36464288 | MS.gene057771:intron |
| GATGATGACAACAATTGGAT+GGG | 0.672812 | 4.4:-36462828 | MS.gene057771:CDS |
| TGGTGGAGATGACTGCAAGT+TGG | 0.682617 | 4.4:-36464219 | MS.gene057771:CDS |
| ATAGAGGGAGATGAAGAAGG+TGG | 0.694464 | 4.4:-36463002 | MS.gene057771:CDS |
| TGGCTACTTAGAAAATGCAG+TGG | 0.707079 | 4.4:+36463499 | None:intergenic |
| GAACTACTCTTCTCTCATGG+AGG | 0.707424 | 4.4:-36462972 | MS.gene057771:CDS |
| TATAGGTGGAGATTACTCAG+AGG | 0.710079 | 4.4:-36464709 | MS.gene057771:intron |
| AAGATGCCAACACTCCCTCG+TGG | 0.712873 | 4.4:+36463252 | None:intergenic |
| GAGTGGGATCCTAACCACGA+GGG | 0.751517 | 4.4:-36463266 | MS.gene057771:CDS |
| AGAGTGGGATCCTAACCACG+AGG | 0.769525 | 4.4:-36463267 | MS.gene057771:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATCAAAAACCTT+TGG | + | chr4.4:36463127-36463146 | None:intergenic | 15.0% |
| !!! | ATTATCATTTTTCTTATACA+CGG | - | chr4.4:36463975-36463994 | MS.gene057771:intron | 15.0% |
| !! | AAGAAAAATGATAATCATCA+TGG | + | chr4.4:36463970-36463989 | None:intergenic | 20.0% |
| !! | AAGTTAAATTCCAATTAATG+GGG | - | chr4.4:36464107-36464126 | MS.gene057771:intron | 20.0% |
| !! | GAAGTTAAATTCCAATTAAT+GGG | - | chr4.4:36464106-36464125 | MS.gene057771:intron | 20.0% |
| !!! | ATGAGAATTGATTTGATAAT+TGG | - | chr4.4:36463537-36463556 | MS.gene057771:CDS | 20.0% |
| !!! | GAAAAATATCAGATTTTTCA+TGG | - | chr4.4:36464982-36465001 | MS.gene057771:CDS | 20.0% |
| !!! | TGTTTGTTGTTTGTTTTTAT+AGG | - | chr4.4:36463197-36463216 | MS.gene057771:intron | 20.0% |
| !!! | TTATGTGTTTGATTTTACTA+AGG | - | chr4.4:36463323-36463342 | MS.gene057771:intron | 20.0% |
| ! | ACTGAAAACATAATCAAACA+AGG | + | chr4.4:36464171-36464190 | None:intergenic | 25.0% |
| ! | AGTTAAATTCCAATTAATGG+GGG | - | chr4.4:36464108-36464127 | MS.gene057771:intron | 25.0% |
| ! | CATAAACAGAGAATTGAAAT+AGG | - | chr4.4:36464840-36464859 | MS.gene057771:CDS | 25.0% |
| ! | GGAAGTTAAATTCCAATTAA+TGG | - | chr4.4:36464105-36464124 | MS.gene057771:intron | 25.0% |
| ! | TATTACTATCTTGTAGTTGA+TGG | - | chr4.4:36464496-36464515 | MS.gene057771:CDS | 25.0% |
| ! | TCTCATAATGTCATAAATGA+AGG | + | chr4.4:36463888-36463907 | None:intergenic | 25.0% |
| !! | TGATAATTGGTGTGTTTTAT+TGG | - | chr4.4:36463550-36463569 | MS.gene057771:CDS | 25.0% |
| !! | TGCATAATGAGAATTTGTTT+GGG | - | chr4.4:36463679-36463698 | MS.gene057771:intron | 25.0% |
| !! | TTGCATAATGAGAATTTGTT+TGG | - | chr4.4:36463678-36463697 | MS.gene057771:intron | 25.0% |
| !!! | AACTGATAAGTTTTTAGCTT+TGG | - | chr4.4:36464565-36464584 | MS.gene057771:CDS | 25.0% |
| !!! | CTTCATAATATTTGTTGTGT+AGG | - | chr4.4:36463798-36463817 | MS.gene057771:intron | 25.0% |
| !!! | TTGTTGTTTGTTTTTATAGG+TGG | - | chr4.4:36463200-36463219 | MS.gene057771:intron | 25.0% |
| AAACAAGGTAACTTCTCTAT+TGG | + | chr4.4:36464156-36464175 | None:intergenic | 30.0% | |
| AAACCAAATACGTGAGTAAA+AGG | + | chr4.4:36464602-36464621 | None:intergenic | 30.0% | |
| AAAGAAACAAAGAATTCCGT+AGG | + | chr4.4:36464752-36464771 | None:intergenic | 30.0% | |
| ACAAACAACAAACATCATTC+AGG | + | chr4.4:36463191-36463210 | None:intergenic | 30.0% | |
| ACATACAAAATCGAATCTAC+AGG | + | chr4.4:36464542-36464561 | None:intergenic | 30.0% | |
| CAAAAATACAAACAGACATC+AGG | + | chr4.4:36464252-36464271 | None:intergenic | 30.0% | |
| GTCATCATGAAAATAAAGCA+TGG | + | chr4.4:36464881-36464900 | None:intergenic | 30.0% | |
| GTTAAATTCCAATTAATGGG+GGG | - | chr4.4:36464109-36464128 | MS.gene057771:intron | 30.0% | |
| TATGAATCTGTGATAGATGA+AGG | + | chr4.4:36464459-36464478 | None:intergenic | 30.0% | |
| TCTTCATCAAGCATATGATA+TGG | - | chr4.4:36463830-36463849 | MS.gene057771:intron | 30.0% | |
| ! | AATTGGAATTTAACTTCCGA+TGG | + | chr4.4:36464103-36464122 | None:intergenic | 30.0% |
| ! | ATGATCATAAGATTTGCTTG+TGG | - | chr4.4:36463454-36463473 | MS.gene057771:intron | 30.0% |
| ! | CAAAAACCTTTGGAAGAATA+GGG | + | chr4.4:36463117-36463136 | None:intergenic | 30.0% |
| ! | TCAAAAACCTTTGGAAGAAT+AGG | + | chr4.4:36463118-36463137 | None:intergenic | 30.0% |
| ! | TGATCATAAGATTTGCTTGT+GGG | - | chr4.4:36463455-36463474 | MS.gene057771:intron | 30.0% |
| ! | TTGATTTTACTAAGGAGAGA+GGG | - | chr4.4:36463331-36463350 | MS.gene057771:intron | 30.0% |
| !! | ATGTCTGTTTGTATTTTTGC+TGG | - | chr4.4:36464253-36464272 | MS.gene057771:CDS | 30.0% |
| !! | TAATATTTGTTGTGTAGGCT+AGG | - | chr4.4:36463803-36463822 | MS.gene057771:intron | 30.0% |
| !! | TTTGATTTTACTAAGGAGAG+AGG | - | chr4.4:36463330-36463349 | MS.gene057771:intron | 30.0% |
| !! | TTTTTCAATGTGTAGAGATG+AGG | - | chr4.4:36464623-36464642 | MS.gene057771:CDS | 30.0% |
| !!! | AATCCTGATTTTAGGTTGAA+GGG | - | chr4.4:36463363-36463382 | MS.gene057771:intron | 30.0% |
| !!! | CTTTATTTTCATGATGACTC+AGG | - | chr4.4:36464883-36464902 | MS.gene057771:CDS | 30.0% |
| !!! | TAATCCTGATTTTAGGTTGA+AGG | - | chr4.4:36463362-36463381 | MS.gene057771:intron | 30.0% |
| AGGATAATTCTTTCCATGTC+TGG | - | chr4.4:36465042-36465061 | MS.gene057771:CDS | 35.0% | |
| ATTATGAGAACCAACCCAAT+TGG | - | chr4.4:36463899-36463918 | MS.gene057771:intron | 35.0% | |
| GATGATGACAACAATTGGAT+GGG | - | chr4.4:36465095-36465114 | MS.gene057771:CDS | 35.0% | |
| GCCAAAATCCATTCACTATA+CGG | + | chr4.4:36464349-36464368 | None:intergenic | 35.0% | |
| GTCAAAACCTGCAATGAATT+TGG | - | chr4.4:36463943-36463962 | MS.gene057771:intron | 35.0% | |
| TAAATCAAAGAGACCGATGT+CGG | + | chr4.4:36464389-36464408 | None:intergenic | 35.0% | |
| TGAAAACCCTATTCTTCCAA+AGG | - | chr4.4:36463108-36463127 | MS.gene057771:intron | 35.0% | |
| TGAAATTGTCGTTGAACTTG+TGG | - | chr4.4:36463605-36463624 | MS.gene057771:intron | 35.0% | |
| TGATAGAAGGCTAATGGTTT+GGG | - | chr4.4:36464701-36464720 | MS.gene057771:CDS | 35.0% | |
| TGATGCTGTTCATGTTTATG+AGG | - | chr4.4:36463509-36463528 | MS.gene057771:CDS | 35.0% | |
| TTATGAGAACCAACCCAATT+GGG | - | chr4.4:36463900-36463919 | MS.gene057771:intron | 35.0% | |
| TTGAAGAAGAATTCTCCGTT+TGG | - | chr4.4:36462855-36462874 | MS.gene057771:CDS | 35.0% | |
| TTTCATGATGACTCAGGATT+GGG | - | chr4.4:36464889-36464908 | MS.gene057771:CDS | 35.0% | |
| ! | AAGAATGGGTATCTTTTGAG+TGG | - | chr4.4:36463426-36463445 | MS.gene057771:intron | 35.0% |
| ! | AATGAGAATTTGTTTGGGTC+TGG | - | chr4.4:36463684-36463703 | MS.gene057771:intron | 35.0% |
| ! | ACATCGGTCTCTTTGATTTA+CGG | - | chr4.4:36464389-36464408 | MS.gene057771:intron | 35.0% |
| ! | ACTTGTGGTTTTTGTGTGTT+AGG | - | chr4.4:36463620-36463639 | MS.gene057771:intron | 35.0% |
| ! | AGGGTTGTAATCCTGATTTT+AGG | - | chr4.4:36463355-36463374 | MS.gene057771:intron | 35.0% |
| ! | CTTGTGGTTTTTGTGTGTTA+GGG | - | chr4.4:36463621-36463640 | MS.gene057771:intron | 35.0% |
| ! | GTGTCTTCTTTTACCTGTTA+AGG | + | chr4.4:36464728-36464747 | None:intergenic | 35.0% |
| ! | TGATTTTACTAAGGAGAGAG+GGG | - | chr4.4:36463332-36463351 | MS.gene057771:intron | 35.0% |
| ! | TTTGGAAGAATAGGGTTTTC+AGG | + | chr4.4:36463109-36463128 | None:intergenic | 35.0% |
| ! | TTTTCATGATGACTCAGGAT+TGG | - | chr4.4:36464888-36464907 | MS.gene057771:CDS | 35.0% |
| !! | AGTTGGTAATTTGGGATTTG+CGG | - | chr4.4:36463721-36463740 | MS.gene057771:intron | 35.0% |
| !! | ATGACTGCAAGTTGGTAATT+TGG | - | chr4.4:36463712-36463731 | MS.gene057771:intron | 35.0% |
| !! | TCCGTATAGTGAATGGATTT+TGG | - | chr4.4:36464345-36464364 | MS.gene057771:intron | 35.0% |
| !! | TGACTGCAAGTTGGTAATTT+GGG | - | chr4.4:36463713-36463732 | MS.gene057771:intron | 35.0% |
| !!! | CTTGGAGTGGTTTTAAGAAT+GGG | - | chr4.4:36463412-36463431 | MS.gene057771:intron | 35.0% |
| !!! | GTTTTATTGGTCTTGTTGTG+AGG | - | chr4.4:36463563-36463582 | MS.gene057771:CDS | 35.0% |
| !!! | TCTTGGAGTGGTTTTAAGAA+TGG | - | chr4.4:36463411-36463430 | MS.gene057771:intron | 35.0% |
| AAGGAAGCCATTGAACAGTA+AGG | + | chr4.4:36462940-36462959 | None:intergenic | 40.0% | |
| ACACCATTACCTCTCTTTCA+TGG | + | chr4.4:36463776-36463795 | None:intergenic | 40.0% | |
| ACCATTACCTCTCTTTCATG+GGG | + | chr4.4:36463774-36463793 | None:intergenic | 40.0% | |
| ACTCAGAGGATTCTTGTTGA+TGG | - | chr4.4:36463228-36463247 | MS.gene057771:CDS | 40.0% | |
| AGGAAGCCATTGAACAGTAA+GGG | + | chr4.4:36462939-36462958 | None:intergenic | 40.0% | |
| ATAGCATACAAAGCCCCAAT+TGG | + | chr4.4:36463917-36463936 | None:intergenic | 40.0% | |
| ATGAAGAGATCGTAGAGAAG+AGG | + | chr4.4:36462893-36462912 | None:intergenic | 40.0% | |
| ATGGCGATGATGACAACAAT+TGG | - | chr4.4:36465090-36465109 | MS.gene057771:CDS | 40.0% | |
| ATTTGCTTGTGGGATGTGTT+TGG | - | chr4.4:36463465-36463484 | MS.gene057771:intron | 40.0% | |
| CACCATTACCTCTCTTTCAT+GGG | + | chr4.4:36463775-36463794 | None:intergenic | 40.0% | |
| CAGGCATTTCATCAAACAGT+TGG | + | chr4.4:36463172-36463191 | None:intergenic | 40.0% | |
| CCTATTAGAACATACTGTCC+AGG | - | chr4.4:36464068-36464087 | MS.gene057771:intron | 40.0% | |
| CCTGGACAGTATGTTCTAAT+AGG | + | chr4.4:36464071-36464090 | None:intergenic | 40.0% | |
| CGATGATGACAACAATTGGA+TGG | - | chr4.4:36465094-36465113 | MS.gene057771:CDS | 40.0% | |
| CTCAGAGGATTCTTGTTGAT+GGG | - | chr4.4:36463229-36463248 | MS.gene057771:CDS | 40.0% | |
| CTGATAGAAGGCTAATGGTT+TGG | - | chr4.4:36464700-36464719 | MS.gene057771:CDS | 40.0% | |
| CTTTCAGTCCGTATAGTGAA+TGG | - | chr4.4:36464338-36464357 | MS.gene057771:intron | 40.0% | |
| GAGGTAATTGGGTTCTTCAT+CGG | + | chr4.4:36463029-36463048 | None:intergenic | 40.0% | |
| GCTACACTTGAAATTACCCA+TGG | + | chr4.4:36465020-36465039 | None:intergenic | 40.0% | |
| GGTAAAAGAAGACACTCCTA+CGG | - | chr4.4:36464733-36464752 | MS.gene057771:intron | 40.0% | |
| GTTAAAGGAAGAGTTGGAGT+GGG | + | chr4.4:36462975-36462994 | None:intergenic | 40.0% | |
| TAGCATACAAAGCCCCAATT+GGG | + | chr4.4:36463916-36463935 | None:intergenic | 40.0% | |
| TATAGGTGGAGATTACTCAG+AGG | - | chr4.4:36463214-36463233 | MS.gene057771:CDS | 40.0% | |
| TATCTCAGATTGAGCAACCT+CGG | + | chr4.4:36464029-36464048 | None:intergenic | 40.0% | |
| TATGAGAACCAACCCAATTG+GGG | - | chr4.4:36463901-36463920 | MS.gene057771:intron | 40.0% | |
| TCAGAGGATTCTTGTTGATG+GGG | - | chr4.4:36463230-36463249 | MS.gene057771:CDS | 40.0% | |
| TCATGGTCCAAATTCATTGC+AGG | + | chr4.4:36463953-36463972 | None:intergenic | 40.0% | |
| TCCATGAGAGAAGAGTAGTT+CGG | + | chr4.4:36464952-36464971 | None:intergenic | 40.0% | |
| TGAAGGGTCATGAGAAAGAA+GGG | - | chr4.4:36463379-36463398 | MS.gene057771:intron | 40.0% | |
| TGACCCTTCAACCTAAAATC+AGG | + | chr4.4:36463369-36463388 | None:intergenic | 40.0% | |
| TGCGAAGACTTGTAATTCAG+AGG | - | chr4.4:36463299-36463318 | MS.gene057771:intron | 40.0% | |
| TGGCTACTTAGAAAATGCAG+TGG | + | chr4.4:36464427-36464446 | None:intergenic | 40.0% | |
| TTAAAGGAAGAGTTGGAGTG+GGG | + | chr4.4:36462974-36462993 | None:intergenic | 40.0% | |
| TTCATGATGACTCAGGATTG+GGG | - | chr4.4:36464890-36464909 | MS.gene057771:CDS | 40.0% | |
| TTCTTTCCATGTCTGGCAAA+TGG | - | chr4.4:36465049-36465068 | MS.gene057771:CDS | 40.0% | |
| TTGAAGGGTCATGAGAAAGA+AGG | - | chr4.4:36463378-36463397 | MS.gene057771:intron | 40.0% | |
| ! | AATACGTGAGTAAAAGGCAC+TGG | + | chr4.4:36464596-36464615 | None:intergenic | 40.0% |
| ! | AATTGGGGCTTTGTATGCTA+TGG | - | chr4.4:36463916-36463935 | MS.gene057771:intron | 40.0% |
| ! | CTTTGATTTACGGAAGCTTG+AGG | - | chr4.4:36464399-36464418 | MS.gene057771:intron | 40.0% |
| ! | GGTAATTTCAAGTGTAGCTG+AGG | - | chr4.4:36465022-36465041 | MS.gene057771:CDS | 40.0% |
| ! | GTCATGAGAAAGAAGGGTAT+GGG | - | chr4.4:36463385-36463404 | MS.gene057771:intron | 40.0% |
| ! | GTGCCTTTTACTCACGTATT+TGG | - | chr4.4:36464596-36464615 | MS.gene057771:CDS | 40.0% |
| ! | TAATGGTTTGGGACCTTAAC+AGG | - | chr4.4:36464712-36464731 | MS.gene057771:intron | 40.0% |
| ! | TTCAACCTCTGCTTCGTTTT+CGG | + | chr4.4:36462840-36462859 | None:intergenic | 40.0% |
| !! | AGGAGTGTTTCTCTTCCAAA+CGG | + | chr4.4:36462873-36462892 | None:intergenic | 40.0% |
| !! | CATCTTCTAGTGCTGATAGA+AGG | - | chr4.4:36464688-36464707 | MS.gene057771:CDS | 40.0% |
| !! | GCTGAAAGCATCTACAATGA+TGG | - | chr4.4:36465071-36465090 | MS.gene057771:CDS | 40.0% |
| !! | GTTGTATGCTCGTTTTGAAC+AGG | - | chr4.4:36464303-36464322 | MS.gene057771:intron | 40.0% |
| !! | TAGTGCTGATAGAAGGCTAA+TGG | - | chr4.4:36464695-36464714 | MS.gene057771:CDS | 40.0% |
| !!! | AAATTACCCATGGCTGGTTT+TGG | + | chr4.4:36465010-36465029 | None:intergenic | 40.0% |
| ACCCCATGAAAGAGAGGTAA+TGG | - | chr4.4:36463770-36463789 | MS.gene057771:intron | 45.0% | |
| ACTCAAACCCCATGAAAGAG+AGG | - | chr4.4:36463764-36463783 | MS.gene057771:intron | 45.0% | |
| AGCCATTGAACAGTAAGGGA+AGG | + | chr4.4:36462935-36462954 | None:intergenic | 45.0% | |
| AGGAAAAGCCCCCCATTAAT+TGG | + | chr4.4:36464120-36464139 | None:intergenic | 45.0% | |
| ATACAAAGCCCCAATTGGGT+TGG | + | chr4.4:36463912-36463931 | None:intergenic | 45.0% | |
| ATAGAGGGAGATGAAGAAGG+TGG | - | chr4.4:36464921-36464940 | MS.gene057771:CDS | 45.0% | |
| ATAGATGAAGGTCGTACGTG+TGG | + | chr4.4:36464447-36464466 | None:intergenic | 45.0% | |
| ATCTCAGATTGAGCAACCTC+GGG | + | chr4.4:36464028-36464047 | None:intergenic | 45.0% | |
| ATGGAACCAAAACCAGCCAT+GGG | - | chr4.4:36465001-36465020 | MS.gene057771:CDS | 45.0% | |
| ATGGGGTTTGAGTGAATGCT+GGG | + | chr4.4:36463757-36463776 | None:intergenic | 45.0% | |
| ATTGGGGATGAGCTGATAGA+GGG | - | chr4.4:36464906-36464925 | MS.gene057771:CDS | 45.0% | |
| CACTTGAAATTACCCATGGC+TGG | + | chr4.4:36465016-36465035 | None:intergenic | 45.0% | |
| CCATGAGAGAAGAGTAGTTC+GGG | + | chr4.4:36464951-36464970 | None:intergenic | 45.0% | |
| CTGATAGAGGGAGATGAAGA+AGG | - | chr4.4:36464918-36464937 | MS.gene057771:CDS | 45.0% | |
| GAACTACTCTTCTCTCATGG+AGG | - | chr4.4:36464951-36464970 | MS.gene057771:CDS | 45.0% | |
| GAGGAGTTTGTGGAGGTTAA+AGG | + | chr4.4:36462990-36463009 | None:intergenic | 45.0% | |
| GCAACAACATTCGCATTCTG+TGG | + | chr4.4:36463279-36463298 | None:intergenic | 45.0% | |
| GGTCATGAGAAAGAAGGGTA+TGG | - | chr4.4:36463384-36463403 | MS.gene057771:intron | 45.0% | |
| GGTTAAAGGAAGAGTTGGAG+TGG | + | chr4.4:36462976-36462995 | None:intergenic | 45.0% | |
| GTGGAGGTTAAAGGAAGAGT+TGG | + | chr4.4:36462981-36463000 | None:intergenic | 45.0% | |
| GTGTGGTTGAAGATGTGTCT+TGG | - | chr4.4:36463652-36463671 | MS.gene057771:intron | 45.0% | |
| GTGTTAGGGACATGAAAGTG+TGG | - | chr4.4:36463635-36463654 | MS.gene057771:intron | 45.0% | |
| TCAGCGAGCATGAGGTAATT+GGG | + | chr4.4:36463040-36463059 | None:intergenic | 45.0% | |
| TTCAGCGAGCATGAGGTAAT+TGG | + | chr4.4:36463041-36463060 | None:intergenic | 45.0% | |
| TTCTCTCATGGAGGTCACAA+AGG | - | chr4.4:36464960-36464979 | MS.gene057771:CDS | 45.0% | |
| TTTACTAAGGAGAGAGGGGA+GGG | - | chr4.4:36463336-36463355 | MS.gene057771:intron | 45.0% | |
| TTTCAGCCATTTGCCAGACA+TGG | + | chr4.4:36465058-36465077 | None:intergenic | 45.0% | |
| ! | ATGAGGTATTCCAGGTAGAG+TGG | - | chr4.4:36464640-36464659 | MS.gene057771:CDS | 45.0% |
| ! | CTCTGCTTCGTTTTCGGTTT+CGG | + | chr4.4:36462834-36462853 | None:intergenic | 45.0% |
| ! | GAGAATTTGTTTGGGTCTGG+TGG | - | chr4.4:36463687-36463706 | MS.gene057771:intron | 45.0% |
| ! | GGCTTTTCCTGCAAAAATGG+GGG | - | chr4.4:36464130-36464149 | MS.gene057771:intron | 45.0% |
| ! | GGGCTTTTCCTGCAAAAATG+GGG | - | chr4.4:36464129-36464148 | MS.gene057771:intron | 45.0% |
| ! | GGGGCTTTTCCTGCAAAAAT+GGG | - | chr4.4:36464128-36464147 | MS.gene057771:intron | 45.0% |
| ! | GTGTAGAGATGAGGTATTCC+AGG | - | chr4.4:36464632-36464651 | MS.gene057771:CDS | 45.0% |
| ! | TGAGGTATTCCAGGTAGAGT+GGG | - | chr4.4:36464641-36464660 | MS.gene057771:CDS | 45.0% |
| ! | TGTTGATGGGGAGGTGAATA+GGG | - | chr4.4:36463242-36463261 | MS.gene057771:CDS | 45.0% |
| ! | TTGTTGATGGGGAGGTGAAT+AGG | - | chr4.4:36463241-36463260 | MS.gene057771:CDS | 45.0% |
| ! | TTTTACTAAGGAGAGAGGGG+AGG | - | chr4.4:36463335-36463354 | MS.gene057771:intron | 45.0% |
| CATGGAACCAAAACCAGCCA+TGG | - | chr4.4:36465000-36465019 | MS.gene057771:CDS | 50.0% | |
| CATGGGGTTTGAGTGAATGC+TGG | + | chr4.4:36463758-36463777 | None:intergenic | 50.0% | |
| CCCGAACTACTCTTCTCTCA+TGG | - | chr4.4:36464948-36464967 | MS.gene057771:CDS | 50.0% | |
| CGAAACCGAAAACGAAGCAG+AGG | - | chr4.4:36462832-36462851 | MS.gene057771:CDS | 50.0% | |
| GATTGGGGATGAGCTGATAG+AGG | - | chr4.4:36464905-36464924 | MS.gene057771:CDS | 50.0% | |
| GCATCTTCAGACACCGACAT+CGG | - | chr4.4:36464373-36464392 | MS.gene057771:intron | 50.0% | |
| GGCCTTCCCTTACTGTTCAA+TGG | - | chr4.4:36462930-36462949 | MS.gene057771:CDS | 50.0% | |
| GTCCAGGAGAAACTCACCAT+CGG | - | chr4.4:36464084-36464103 | MS.gene057771:intron | 50.0% | |
| TCTCAGATTGAGCAACCTCG+GGG | + | chr4.4:36464027-36464046 | None:intergenic | 50.0% | |
| TGAGAGAAGAGTAGTTCGGG+AGG | + | chr4.4:36464948-36464967 | None:intergenic | 50.0% | |
| TGGGTTCTTCATCGGAAGTG+TGG | + | chr4.4:36463021-36463040 | None:intergenic | 50.0% | |
| TGGTGGAGATGACTGCAAGT+TGG | - | chr4.4:36463704-36463723 | MS.gene057771:intron | 50.0% | |
| TTCAGGATCTGCAGCGATGA+CGG | + | chr4.4:36463092-36463111 | None:intergenic | 50.0% | |
| TTCCGATGGTGAGTTTCTCC+TGG | + | chr4.4:36464089-36464108 | None:intergenic | 50.0% | |
| ! | AAGAAGGGTATGGGCTGTCT+TGG | - | chr4.4:36463394-36463413 | MS.gene057771:intron | 50.0% |
| ! | GAGGATTCTTGTTGATGGGG+AGG | - | chr4.4:36463233-36463252 | MS.gene057771:CDS | 50.0% |
| ! | GGGGGCTTTTCCTGCAAAAA+TGG | - | chr4.4:36464127-36464146 | MS.gene057771:intron | 50.0% |
| ! | GGGTTCTTCATCGGAAGTGT+GGG | + | chr4.4:36463020-36463039 | None:intergenic | 50.0% |
| ! | TTCTTCATCGGAAGTGTGGG+TGG | + | chr4.4:36463017-36463036 | None:intergenic | 50.0% |
| !! | CTATTGGCCCCCATTTTTGC+AGG | + | chr4.4:36464140-36464159 | None:intergenic | 50.0% |
| AAGATGCCAACACTCCCTCG+TGG | + | chr4.4:36464674-36464693 | None:intergenic | 55.0% | |
| AGAGTGGGATCCTAACCACG+AGG | - | chr4.4:36464656-36464675 | MS.gene057771:CDS | 55.0% | |
| ATGGGGAGGTGAATAGGGCT+CGG | - | chr4.4:36463247-36463266 | MS.gene057771:CDS | 55.0% | |
| CTCAGATTGAGCAACCTCGG+GGG | + | chr4.4:36464026-36464045 | None:intergenic | 55.0% | |
| GAAGAGTTGGAGTGGGGTTG+AGG | + | chr4.4:36462968-36462987 | None:intergenic | 55.0% | |
| GAGTGGGATCCTAACCACGA+GGG | - | chr4.4:36464657-36464676 | MS.gene057771:CDS | 55.0% | |
| GATTGATGTTTAGCCCCCCG+AGG | - | chr4.4:36464009-36464028 | MS.gene057771:intron | 55.0% | |
| GGTTAGGATCCCACTCTACC+TGG | + | chr4.4:36464653-36464672 | None:intergenic | 55.0% | |
| TAAGGGAAGGCCATGCGAGA+GGG | + | chr4.4:36462922-36462941 | None:intergenic | 55.0% | |
| TCAGATTGAGCAACCTCGGG+GGG | + | chr4.4:36464025-36464044 | None:intergenic | 55.0% | |
| TCAGGATCTGCAGCGATGAC+GGG | + | chr4.4:36463091-36463110 | None:intergenic | 55.0% | |
| TCATCTCACACCCTCTCGCA+TGG | - | chr4.4:36462909-36462928 | MS.gene057771:CDS | 55.0% | |
| ! | ACGGGTTGAGATGGGTTTCC+GGG | + | chr4.4:36463073-36463092 | None:intergenic | 55.0% |
| ! | GAGTGGATTCAGCGAGCATG+AGG | + | chr4.4:36463048-36463067 | None:intergenic | 55.0% |
| ! | TCCTAACCACGAGGGAGTGT+TGG | - | chr4.4:36464665-36464684 | MS.gene057771:CDS | 55.0% |
| !! | CAGCGATGACGGGTTGAGAT+GGG | + | chr4.4:36463081-36463100 | None:intergenic | 55.0% |
| !! | GACGGGTTGAGATGGGTTTC+CGG | + | chr4.4:36463074-36463093 | None:intergenic | 55.0% |
| CTCGCTGAATCCACTCTCCC+CGG | - | chr4.4:36463052-36463071 | MS.gene057771:intron | 60.0% | |
| GAGTGGGGTTGAGGAGGTGA+AGG | + | chr4.4:36462959-36462978 | None:intergenic | 60.0% | |
| GAGTTGGAGTGGGGTTGAGG+AGG | + | chr4.4:36462965-36462984 | None:intergenic | 60.0% | |
| GCCAACACTCCCTCGTGGTT+AGG | + | chr4.4:36464669-36464688 | None:intergenic | 60.0% | |
| GTAAGGGAAGGCCATGCGAG+AGG | + | chr4.4:36462923-36462942 | None:intergenic | 60.0% | |
| TGGCGAGGAGGAGTTTGTGG+AGG | + | chr4.4:36462997-36463016 | None:intergenic | 60.0% | |
| TGGGGAGGTGAATAGGGCTC+GGG | - | chr4.4:36463248-36463267 | MS.gene057771:CDS | 60.0% | |
| ! | AGATGGGTTTCCGGGGAGAG+TGG | + | chr4.4:36463065-36463084 | None:intergenic | 60.0% |
| ! | CGGGTTGAGATGGGTTTCCG+GGG | + | chr4.4:36463072-36463091 | None:intergenic | 60.0% |
| ! | GGGTATGGGCTGTCTTGGAG+TGG | - | chr4.4:36463399-36463418 | MS.gene057771:intron | 60.0% |
| !! | GCAGCGATGACGGGTTGAGA+TGG | + | chr4.4:36463082-36463101 | None:intergenic | 60.0% |
| GGGTGGCGAGGAGGAGTTTG+TGG | + | chr4.4:36463000-36463019 | None:intergenic | 65.0% | |
| ! | CATCGGAAGTGTGGGTGGCG+AGG | + | chr4.4:36463012-36463031 | None:intergenic | 65.0% |
| ! | CGGAAGTGTGGGTGGCGAGG+AGG | + | chr4.4:36463009-36463028 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 36462812 | 36465133 | 36462812 | ID=MS.gene057771 |
| chr4.4 | mRNA | 36462812 | 36465133 | 36462812 | ID=MS.gene057771.t1;Parent=MS.gene057771 |
| chr4.4 | exon | 36464780 | 36465133 | 36464780 | ID=MS.gene057771.t1.exon1;Parent=MS.gene057771.t1 |
| chr4.4 | CDS | 36464780 | 36465133 | 36464780 | ID=cds.MS.gene057771.t1;Parent=MS.gene057771.t1 |
| chr4.4 | exon | 36464415 | 36464726 | 36464415 | ID=MS.gene057771.t1.exon2;Parent=MS.gene057771.t1 |
| chr4.4 | CDS | 36464415 | 36464726 | 36464415 | ID=cds.MS.gene057771.t1;Parent=MS.gene057771.t1 |
| chr4.4 | exon | 36464160 | 36464303 | 36464160 | ID=MS.gene057771.t1.exon3;Parent=MS.gene057771.t1 |
| chr4.4 | CDS | 36464160 | 36464303 | 36464160 | ID=cds.MS.gene057771.t1;Parent=MS.gene057771.t1 |
| chr4.4 | exon | 36463496 | 36463620 | 36463496 | ID=MS.gene057771.t1.exon4;Parent=MS.gene057771.t1 |
| chr4.4 | CDS | 36463496 | 36463620 | 36463496 | ID=cds.MS.gene057771.t1;Parent=MS.gene057771.t1 |
| chr4.4 | exon | 36463212 | 36463307 | 36463212 | ID=MS.gene057771.t1.exon5;Parent=MS.gene057771.t1 |
| chr4.4 | CDS | 36463212 | 36463307 | 36463212 | ID=cds.MS.gene057771.t1;Parent=MS.gene057771.t1 |
| chr4.4 | exon | 36462812 | 36463040 | 36462812 | ID=MS.gene057771.t1.exon6;Parent=MS.gene057771.t1 |
| chr4.4 | CDS | 36462812 | 36463040 | 36462812 | ID=cds.MS.gene057771.t1;Parent=MS.gene057771.t1 |
| Gene Sequence |
| Protein sequence |
