AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene45307


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45307.t1 MTR_0251s0050 78.261 299 38 1 1 299 1 272 6.24e-160 446
MS.gene45307.t1 MTR_0008s0470 73.597 303 64 5 1 299 1 291 2.09e-144 408
MS.gene45307.t1 MTR_0008s0390 71.000 300 58 5 1 299 1 272 1.63e-143 405
MS.gene45307.t1 MTR_2g089420 44.590 305 134 9 1 275 1 300 1.84e-75 238
MS.gene45307.t1 MTR_2g089450 68.116 138 43 1 1 138 1 137 1.61e-67 211
MS.gene45307.t1 MTR_1g043080 49.510 204 87 6 1 203 1 189 1.30e-58 188
MS.gene45307.t1 MTR_7g115650 57.857 140 58 1 1 140 1 139 3.12e-57 183
MS.gene45307.t1 MTR_1g076150 46.829 205 98 5 1 205 1 194 2.61e-56 182
MS.gene45307.t1 MTR_1g043050 48.544 206 92 6 1 203 1 195 7.76e-56 181
MS.gene45307.t1 MTR_7g096930 59.028 144 54 2 1 144 1 139 1.09e-55 181
MS.gene45307.t1 MTR_2g011660 64.957 117 41 0 1 117 1 117 1.22e-54 181
MS.gene45307.t1 MTR_4g091490 64.103 117 42 0 1 117 1 117 3.50e-54 180
MS.gene45307.t1 MTR_0008s0280 65.217 115 39 1 1 115 1 114 1.37e-53 174
MS.gene45307.t1 MTR_2g089620 54.601 163 66 3 1 163 1 155 2.33e-53 177
MS.gene45307.t1 MTR_1g100653 64.103 117 41 1 1 117 1 116 7.78e-53 175
MS.gene45307.t1 MTR_4g082290 66.667 117 38 1 1 117 1 116 1.11e-52 177
MS.gene45307.t1 MTR_3g074520 61.538 117 44 1 1 117 1 116 2.73e-52 175
MS.gene45307.t1 MTR_4g478180 53.378 148 53 3 1 133 2 148 3.85e-52 174
MS.gene45307.t1 MTR_8g031360 63.559 118 42 1 1 117 1 118 7.98e-52 172
MS.gene45307.t1 MTR_4g073420 38.430 242 135 5 1 232 1 238 2.22e-51 171
MS.gene45307.t1 MTR_1g112760 60.684 117 46 0 1 117 1 117 2.36e-51 169
MS.gene45307.t1 MTR_7g076740 64.407 118 40 2 1 117 1 117 2.58e-51 171
MS.gene45307.t1 MTR_1g085040 49.342 152 77 0 6 157 5 156 3.17e-51 172
MS.gene45307.t1 MTR_7g011170 64.103 117 41 1 1 117 1 116 7.65e-51 170
MS.gene45307.t1 MTR_6g012690 64.103 117 41 1 1 117 1 116 8.24e-51 171
MS.gene45307.t1 MTR_4g125520 64.103 117 41 1 1 117 1 116 1.41e-50 169
MS.gene45307.t1 MTR_8g027345 62.602 123 45 1 1 123 1 122 1.76e-50 169
MS.gene45307.t1 MTR_0063s0090 54.610 141 62 2 1 140 1 140 2.25e-50 166
MS.gene45307.t1 MTR_7g117730 61.983 121 45 1 1 121 1 120 3.58e-50 167
MS.gene45307.t1 MTR_3g077110 62.162 111 42 0 7 117 6 116 4.42e-50 169
MS.gene45307.t1 MTR_5g029840 52.866 157 64 2 1 157 1 147 1.17e-49 167
MS.gene45307.t1 MTR_4g082230 63.248 117 42 1 1 117 1 116 1.98e-49 169
MS.gene45307.t1 MTR_3g097450 62.393 117 43 1 1 117 1 116 1.99e-49 166
MS.gene45307.t1 MTR_4g102380 61.538 117 44 1 1 117 1 116 2.09e-49 165
MS.gene45307.t1 MTR_4g105130 46.667 195 86 4 6 200 5 181 2.14e-49 168
MS.gene45307.t1 MTR_7g110830 49.669 151 76 0 6 156 5 155 3.98e-49 167
MS.gene45307.t1 MTR_5g078140 60.684 117 45 1 1 117 1 116 4.47e-49 166
MS.gene45307.t1 MTR_3g065440 41.429 210 109 4 1 200 1 206 6.46e-49 165
MS.gene45307.t1 MTR_5g007370 59.829 117 46 1 1 117 1 116 8.50e-49 164
MS.gene45307.t1 MTR_1g085640 53.333 135 63 0 6 140 5 139 1.07e-48 167
MS.gene45307.t1 MTR_4g121460 60.684 117 45 1 1 117 1 116 1.10e-48 165
MS.gene45307.t1 MTR_7g010210 56.296 135 52 2 1 129 1 134 1.12e-48 165
MS.gene45307.t1 MTR_7g010210 56.296 135 52 2 1 129 1 134 1.91e-48 162
MS.gene45307.t1 MTR_2g067420 64.545 110 38 1 2 111 4 112 3.26e-48 164
MS.gene45307.t1 MTR_8g017500 57.025 121 52 0 3 123 2 122 3.61e-48 164
MS.gene45307.t1 MTR_8g095390 59.829 117 46 1 1 117 1 116 4.16e-48 163
MS.gene45307.t1 MTR_4g485530 61.739 115 44 0 3 117 2 116 7.75e-48 159
MS.gene45307.t1 MTR_8g017440 51.799 139 60 1 6 137 5 143 1.98e-47 162
MS.gene45307.t1 MTR_2g099740 60.714 112 44 0 6 117 5 116 2.77e-47 163
MS.gene45307.t1 MTR_2g034790 58.974 117 47 1 1 117 1 116 8.29e-47 160
MS.gene45307.t1 MTR_6g009430 58.974 117 47 1 1 117 1 116 8.84e-47 160
MS.gene45307.t1 MTR_8g017540 58.929 112 46 0 6 117 51 162 9.32e-47 162
MS.gene45307.t1 MTR_3g461490 58.120 117 48 1 1 117 1 116 1.00e-46 160
MS.gene45307.t1 MTR_2g064160 59.459 111 45 0 7 117 5 115 1.34e-46 159
MS.gene45307.t1 MTR_1g017000 47.239 163 78 4 1 162 1 156 1.71e-46 157
MS.gene45307.t1 MTR_5g079670 59.130 115 46 1 3 117 2 115 3.73e-46 155
MS.gene45307.t1 MTR_3g083540 60.360 111 44 0 7 117 35 145 6.84e-46 157
MS.gene45307.t1 MTR_8g017390 59.649 114 43 2 6 117 5 117 3.75e-45 159
MS.gene45307.t1 MTR_7g087130 49.032 155 75 3 1 153 1 153 3.86e-45 156
MS.gene45307.t1 MTR_0140s0030 54.545 121 54 1 1 121 2 121 6.85e-45 155
MS.gene45307.t1 MTR_0489s0020 54.545 121 54 1 1 121 2 121 6.85e-45 155
MS.gene45307.t1 MTR_4g100720 57.025 121 52 0 1 121 1 121 7.51e-45 150
MS.gene45307.t1 MTR_7g111290 62.857 105 39 0 6 110 5 109 1.07e-44 156
MS.gene45307.t1 MTR_3g028740 62.963 108 40 0 10 117 19 126 1.36e-44 155
MS.gene45307.t1 MTR_6g012180 60.360 111 43 1 1 111 1 110 1.52e-44 154
MS.gene45307.t1 MTR_2g097910 62.857 105 39 0 13 117 20 124 1.71e-44 154
MS.gene45307.t1 MTR_8g098860 57.143 112 48 0 6 117 5 116 3.42e-44 153
MS.gene45307.t1 MTR_3g039990 53.488 129 52 2 1 122 2 129 4.77e-44 152
MS.gene45307.t1 MTR_4g057635 56.780 118 49 2 1 117 1 117 8.25e-44 152
MS.gene45307.t1 MTR_8g017340 56.667 120 49 2 6 123 5 123 9.45e-44 156
MS.gene45307.t1 MTR_1g100667 58.120 117 49 0 1 117 1 117 1.17e-43 150
MS.gene45307.t1 MTR_5g042030 61.321 106 41 0 12 117 6 111 1.45e-43 150
MS.gene45307.t1 MTR_6g055910 55.118 127 47 1 9 135 10 126 1.49e-43 150
MS.gene45307.t1 MTR_1g017140 55.085 118 51 2 1 117 1 117 1.94e-43 152
MS.gene45307.t1 MTR_7g102110 55.932 118 50 2 1 117 1 117 3.66e-43 149
MS.gene45307.t1 MTR_5g014990 55.932 118 50 2 1 117 1 117 3.68e-43 150
MS.gene45307.t1 MTR_3g103570 55.932 118 50 2 1 117 1 117 4.14e-43 151
MS.gene45307.t1 MTR_4g065017 60.952 105 41 0 13 117 17 121 4.58e-43 150
MS.gene45307.t1 MTR_1g110460 55.200 125 53 1 13 137 26 147 5.97e-43 149
MS.gene45307.t1 MTR_5g010020 58.491 106 44 0 6 111 5 110 5.98e-43 150
MS.gene45307.t1 MTR_8g017350 57.895 114 45 2 6 117 5 117 7.43e-43 155
MS.gene45307.t1 MTR_1g062940 44.382 178 93 3 13 187 6 180 1.27e-42 146
MS.gene45307.t1 MTR_5g079290 60.377 106 42 0 12 117 16 121 3.60e-42 146
MS.gene45307.t1 MTR_7g035075 55.932 118 52 0 13 130 14 131 4.03e-42 144
MS.gene45307.t1 MTR_6g090405 57.265 117 48 2 1 116 1 116 7.90e-42 145
MS.gene45307.t1 MTR_0197s0010 52.893 121 57 0 17 137 5 125 1.02e-41 144
MS.gene45307.t1 MTR_2g095520 57.143 112 46 2 1 111 1 111 1.07e-41 146
MS.gene45307.t1 MTR_5g079120 52.308 130 62 0 3 132 51 180 1.91e-41 145
MS.gene45307.t1 MTR_7g109320 60.684 117 45 1 1 117 1 116 3.73e-41 146
MS.gene45307.t1 MTR_7g017260 51.471 136 60 2 8 141 20 151 4.47e-41 144
MS.gene45307.t1 MTR_3g011610 51.200 125 61 0 13 137 37 161 4.76e-41 149
MS.gene45307.t1 MTR_5g079220 58.716 109 45 0 9 117 17 125 5.10e-41 144
MS.gene45307.t1 MTR_0001s0360 59.091 110 45 0 8 117 2 111 6.88e-41 142
MS.gene45307.t1 MTR_4g097570 55.856 111 47 2 1 110 1 110 9.11e-41 143
MS.gene45307.t1 MTR_5g078860 58.182 110 46 0 8 117 2 111 1.02e-40 144
MS.gene45307.t1 MTR_5g078910 58.182 110 46 0 8 117 2 111 1.09e-40 143
MS.gene45307.t1 MTR_5g078800 59.091 110 45 0 8 117 2 111 1.28e-40 142
MS.gene45307.t1 MTR_6g006030 55.085 118 50 1 13 127 14 131 1.31e-40 140
MS.gene45307.t1 MTR_3g052430 56.604 106 46 0 11 116 39 144 2.05e-40 147
MS.gene45307.t1 MTR_1g073170 60.194 103 41 0 14 116 21 123 2.86e-40 141
MS.gene45307.t1 MTR_3g052450 55.140 107 48 0 10 116 37 143 3.47e-40 147
MS.gene45307.t1 MTR_5g078950 58.879 107 44 0 8 114 2 108 3.79e-40 141
MS.gene45307.t1 MTR_8g060940 61.165 103 40 0 11 113 5 107 4.38e-40 140
MS.gene45307.t1 MTR_1g045610 55.932 118 51 1 14 131 22 138 4.64e-40 140
MS.gene45307.t1 MTR_8g042410 58.654 104 43 0 13 116 37 140 5.57e-40 146
MS.gene45307.t1 MTR_4g097570 55.357 112 47 3 1 110 1 111 9.31e-40 140
MS.gene45307.t1 MTR_0193s0090 43.820 178 88 4 11 185 5 173 9.79e-40 138
MS.gene45307.t1 MTR_1g086510 48.905 137 61 1 8 144 16 143 1.07e-39 140
MS.gene45307.t1 MTR_4g128670 56.250 112 47 2 1 111 1 111 1.09e-39 142
MS.gene45307.t1 MTR_8g020490 53.846 117 49 1 1 117 1 112 1.11e-39 139
MS.gene45307.t1 MTR_1g021230 48.837 129 66 0 13 141 57 185 2.04e-39 143
MS.gene45307.t1 MTR_0247s0040 58.654 104 43 0 11 114 5 108 3.14e-39 136
MS.gene45307.t1 MTR_1g086530 56.190 105 46 0 13 117 33 137 1.83e-38 137
MS.gene45307.t1 MTR_4g063100 58.252 103 43 0 14 116 8 110 2.13e-38 136
MS.gene45307.t1 MTR_5g078930 46.835 158 68 4 14 161 10 161 3.93e-38 134
MS.gene45307.t1 MTR_2g096380 42.667 150 83 1 13 159 6 155 6.19e-38 134
MS.gene45307.t1 MTR_2g088170 55.963 109 48 0 8 116 24 132 3.64e-37 137
MS.gene45307.t1 MTR_3g045430 47.541 122 64 0 1 122 1 122 7.71e-35 128
MS.gene45307.t1 MTR_2g033170 53.636 110 51 0 8 117 19 128 4.30e-34 127
MS.gene45307.t1 MTR_5g062790 49.138 116 54 2 1 115 1 112 1.85e-33 124
MS.gene45307.t1 MTR_5g088080 49.515 103 51 1 14 115 13 115 1.39e-32 121
MS.gene45307.t1 MTR_5g088150 49.515 103 51 1 14 115 13 115 1.39e-32 121
MS.gene45307.t1 MTR_5g488210 49.515 103 51 1 14 115 13 115 1.39e-32 121
MS.gene45307.t1 MTR_5g088640 49.515 103 51 1 14 115 13 115 1.53e-32 121
MS.gene45307.t1 MTR_6g055910 57.895 95 30 1 41 135 13 97 2.21e-32 120
MS.gene45307.t1 MTR_5g488170 49.515 103 51 1 14 115 13 115 5.49e-32 119
MS.gene45307.t1 MTR_5g007300 58.427 89 36 1 1 89 53 140 5.73e-32 116
MS.gene45307.t1 MTR_4g123040 54.369 103 47 0 13 115 24 126 8.13e-32 120
MS.gene45307.t1 MTR_1g083630 50.000 104 52 0 13 116 12 115 1.09e-31 124
MS.gene45307.t1 MTR_4g029540 35.294 187 115 5 13 194 10 195 1.95e-31 119
MS.gene45307.t1 MTR_5g088610 46.552 116 57 2 1 115 1 112 1.69e-30 117
MS.gene45307.t1 MTR_8g006470 49.038 104 52 1 13 115 10 113 3.29e-30 115
MS.gene45307.t1 MTR_4g063100 65.278 72 25 0 45 116 10 81 1.31e-29 112
MS.gene45307.t1 MTR_7g111290 70.149 67 20 0 44 110 1 67 1.59e-29 115
MS.gene45307.t1 MTR_3g101290 50.485 103 50 1 15 117 37 138 4.28e-29 111
MS.gene45307.t1 MTR_5g070020 47.573 103 51 2 15 116 122 222 9.34e-29 113
MS.gene45307.t1 MTR_2g096380 40.876 137 77 2 26 159 1 136 2.42e-28 108
MS.gene45307.t1 MTR_5g049190 45.794 107 55 2 10 115 14 118 2.53e-28 109
MS.gene45307.t1 MTR_3g463400 42.735 117 64 2 1 116 119 233 5.24e-28 112
MS.gene45307.t1 MTR_4g019370 39.041 146 80 4 15 157 38 177 2.51e-27 109
MS.gene45307.t1 MTR_4g094982 38.037 163 75 4 15 177 5 141 2.85e-27 107
MS.gene45307.t1 MTR_7g451170 37.423 163 89 4 15 170 191 347 2.87e-27 110
MS.gene45307.t1 MTR_4g128190 32.727 165 87 3 6 159 4 155 5.06e-27 105
MS.gene45307.t1 MTR_4g105660 33.480 227 122 10 3 209 168 385 6.40e-27 109
MS.gene45307.t1 MTR_7g037260 46.078 102 54 1 15 116 145 245 8.04e-27 108
MS.gene45307.t1 MTR_7g035350 29.293 198 122 3 15 197 225 419 1.16e-26 108
MS.gene45307.t1 MTR_6g015455 50.000 102 50 1 15 116 5 105 1.66e-26 110
MS.gene45307.t1 MTR_5g016510 46.078 102 54 1 15 116 5 105 4.14e-26 105
MS.gene45307.t1 MTR_7g061330 46.729 107 54 2 13 118 111 215 8.98e-26 107
MS.gene45307.t1 MTR_7g461410 46.729 107 54 2 13 118 111 215 8.98e-26 107
MS.gene45307.t1 MTR_1g085880 44.828 116 62 2 6 119 4 119 1.21e-25 101
MS.gene45307.t1 MTR_6g074860 48.515 101 51 1 15 115 4 103 1.34e-25 102
MS.gene45307.t1 MTR_7g061330 46.729 107 54 2 13 118 75 179 1.75e-25 106
MS.gene45307.t1 MTR_1g085770 44.828 116 62 2 6 119 4 119 3.07e-25 102
MS.gene45307.t1 MTR_4g088015 42.574 101 57 1 15 115 221 320 5.16e-25 104
MS.gene45307.t1 MTR_5g041570 40.769 130 74 2 15 143 134 261 5.40e-25 103
MS.gene45307.t1 MTR_3g077650 38.793 116 69 2 2 116 167 281 8.77e-25 103
MS.gene45307.t1 MTR_1g057980 30.412 194 117 3 9 187 74 264 1.94e-24 100
MS.gene45307.t1 MTR_4g082040 33.702 181 115 3 15 194 105 281 2.29e-24 102
MS.gene45307.t1 MTR_1g026870 43.396 106 59 1 13 118 83 187 2.72e-24 103
MS.gene45307.t1 MTR_1g026870 32.456 114 75 2 15 127 33 145 1.36e-13 71.6
MS.gene45307.t1 MTR_3g110028 43.269 104 58 1 15 118 85 187 2.86e-24 103
MS.gene45307.t1 MTR_3g110028 33.333 114 74 2 15 127 33 145 2.00e-13 70.9
MS.gene45307.t1 MTR_7g037130 33.898 177 106 4 15 187 145 314 1.79e-23 99.0
MS.gene45307.t1 MTR_7g450950 30.811 185 113 5 9 191 151 322 2.77e-23 98.2
MS.gene45307.t1 MTR_0023s0210 51.220 82 40 0 8 89 2 83 1.01e-22 90.1
MS.gene45307.t1 MTR_7g086960 40.268 149 86 3 15 162 89 235 1.44e-22 96.3
MS.gene45307.t1 MTR_3g089045 47.573 103 51 2 15 116 16 116 3.24e-22 94.4
MS.gene45307.t1 MTR_6g027340 39.806 103 59 2 15 116 16 116 3.65e-22 92.0
MS.gene45307.t1 MTR_5g082910 42.718 103 50 2 15 113 19 116 6.50e-22 93.6
MS.gene45307.t1 MTR_6g027360 38.532 109 64 2 9 116 72 178 1.69e-21 92.8
MS.gene45307.t1 MTR_6g027370 42.157 102 58 1 15 116 99 199 8.34e-21 91.3
MS.gene45307.t1 MTR_5g010650 43.878 98 54 1 13 110 108 204 5.97e-20 90.1
MS.gene45307.t1 MTR_7g061550 42.708 96 53 1 18 111 10 105 2.08e-19 87.4
MS.gene45307.t1 MTR_6g055910 53.846 65 20 1 71 135 2 56 2.79e-16 76.3
MS.gene45307.t1 MTR_8g468380 37.984 129 65 3 17 144 24 138 3.43e-16 79.0
MS.gene45307.t1 MTR_5g038910 37.963 108 64 2 17 123 28 133 5.02e-15 75.5
MS.gene45307.t1 MTR_5g038910 37.963 108 64 2 17 123 28 133 5.28e-15 75.1
MS.gene45307.t1 MTR_4g063100 60.870 46 18 0 71 116 1 46 9.67e-14 68.9
MS.gene45307.t1 MTR_2g096380 47.458 59 31 0 71 129 1 59 6.75e-13 66.2
MS.gene45307.t1 MTR_2g088730 61.538 39 15 0 71 109 34 72 1.18e-11 60.1
MS.gene45307.t1 MTR_8g017480 54.167 48 22 0 6 53 5 52 1.61e-11 58.9
MS.gene45307.t1 MTR_1g008970 36.170 94 59 1 48 141 123 215 6.53e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45307.t1 AT1G06180 47.005 217 99 6 1 217 1 201 6.25e-58 186
MS.gene45307.t1 AT2G31180 49.528 212 75 6 1 204 1 188 6.55e-58 186
MS.gene45307.t1 AT3G23250 40.310 258 124 6 1 237 1 249 4.60e-55 180
MS.gene45307.t1 AT4G05100 64.957 117 41 0 1 117 1 117 1.89e-54 180
MS.gene45307.t1 AT4G28110 51.220 164 72 3 1 157 1 163 1.55e-53 176
MS.gene45307.t1 AT1G22640 46.667 195 83 5 1 187 1 182 2.16e-53 175
MS.gene45307.t1 AT3G02940 64.103 117 41 1 1 117 1 116 5.08e-53 176
MS.gene45307.t1 AT2G16720 54.967 151 59 3 1 143 1 150 5.45e-53 174
MS.gene45307.t1 AT5G16770 64.103 117 41 1 1 117 1 116 6.86e-53 176
MS.gene45307.t1 AT5G16770 64.103 117 41 1 1 117 1 116 6.86e-53 176
MS.gene45307.t1 AT4G21440 63.248 117 42 1 1 117 1 116 9.66e-53 176
MS.gene45307.t1 AT5G16770 64.103 117 41 1 1 117 1 116 1.18e-52 176
MS.gene45307.t1 AT5G16770 64.103 117 41 1 1 117 1 116 1.18e-52 176
MS.gene45307.t1 AT3G02940 64.103 117 41 1 1 117 1 116 1.20e-52 175
MS.gene45307.t1 AT3G02940 64.103 117 41 1 1 117 1 116 1.20e-52 175
MS.gene45307.t1 AT3G61250 64.957 117 40 1 1 117 1 116 2.29e-52 174
MS.gene45307.t1 AT4G17785 54.676 139 62 1 1 138 1 139 2.49e-52 175
MS.gene45307.t1 AT4G17785 54.676 139 62 1 1 138 1 139 2.67e-52 175
MS.gene45307.t1 AT3G01140 65.812 117 39 1 1 117 1 116 2.70e-52 175
MS.gene45307.t1 AT5G15310 64.957 117 40 1 1 117 1 116 1.44e-51 172
MS.gene45307.t1 AT5G15310 64.957 117 40 1 1 117 1 116 1.49e-51 170
MS.gene45307.t1 AT5G15310 64.957 117 40 1 1 117 1 116 1.62e-51 172
MS.gene45307.t1 AT1G79180 49.701 167 74 2 2 159 4 169 1.70e-51 171
MS.gene45307.t1 AT1G16490 56.923 130 55 1 2 131 4 132 3.89e-51 170
MS.gene45307.t1 AT1G18570 52.564 156 70 2 1 156 1 152 8.05e-51 171
MS.gene45307.t1 AT3G13540 43.192 213 100 4 3 200 13 219 8.63e-51 168
MS.gene45307.t1 AT3G01140 64.957 117 40 1 1 117 44 159 2.44e-50 171
MS.gene45307.t1 AT5G60890 59.200 125 50 1 1 125 1 124 5.70e-50 167
MS.gene45307.t1 AT4G38620 59.016 122 49 1 1 122 1 121 7.97e-50 167
MS.gene45307.t1 AT5G10280 60.684 117 45 1 1 117 1 116 1.51e-49 167
MS.gene45307.t1 AT1G34670 41.791 201 114 2 1 199 1 200 1.77e-49 168
MS.gene45307.t1 AT5G65230 60.684 117 45 1 1 117 1 116 3.09e-49 166
MS.gene45307.t1 AT4G01680 55.245 143 53 2 6 137 5 147 3.40e-49 164
MS.gene45307.t1 AT4G01680 55.245 143 53 2 6 137 5 147 1.13e-48 165
MS.gene45307.t1 AT1G35515 58.974 117 47 1 1 117 1 116 1.21e-48 161
MS.gene45307.t1 AT4G12350 60.656 122 47 1 1 122 1 121 1.78e-48 163
MS.gene45307.t1 AT1G66230 47.712 153 71 2 1 145 1 152 2.35e-48 163
MS.gene45307.t1 AT5G56110 59.829 117 46 1 1 117 1 116 2.84e-48 164
MS.gene45307.t1 AT1G56160 59.483 116 46 1 2 117 4 118 3.20e-48 163
MS.gene45307.t1 AT1G74430 63.063 111 41 0 12 122 11 121 3.21e-48 162
MS.gene45307.t1 AT5G26660 62.500 112 42 0 6 117 5 116 4.73e-48 164
MS.gene45307.t1 AT4G09460 58.974 117 47 1 1 117 1 116 4.87e-48 160
MS.gene45307.t1 AT1G74080 62.609 115 42 1 1 115 1 114 7.45e-48 163
MS.gene45307.t1 AT4G22680 59.829 117 46 1 1 117 1 116 7.67e-48 161
MS.gene45307.t1 AT1G08810 43.204 206 103 4 1 206 1 192 1.51e-47 160
MS.gene45307.t1 AT1G09540 52.593 135 64 0 6 140 5 139 1.60e-47 163
MS.gene45307.t1 AT5G16600 58.974 117 47 1 1 117 1 116 1.77e-47 162
MS.gene45307.t1 AT4G34990 60.684 117 45 1 1 117 1 116 2.47e-47 160
MS.gene45307.t1 AT5G54230 64.762 105 37 0 13 117 12 116 3.22e-47 161
MS.gene45307.t1 AT5G07690 60.000 115 45 1 1 115 1 114 3.45e-47 161
MS.gene45307.t1 AT5G61420 58.974 117 47 1 1 117 1 116 4.82e-47 162
MS.gene45307.t1 AT1G57560 50.360 139 61 1 6 136 5 143 6.25e-47 159
MS.gene45307.t1 AT3G62610 59.829 117 46 1 1 117 1 116 9.54e-47 160
MS.gene45307.t1 AT5G14750 65.385 104 36 0 14 117 17 120 1.07e-46 156
MS.gene45307.t1 AT1G57560 58.929 112 46 0 6 117 5 116 1.51e-46 159
MS.gene45307.t1 AT5G07700 58.974 117 47 1 1 117 1 116 1.57e-46 160
MS.gene45307.t1 AT5G07700 58.974 117 47 1 1 117 1 116 1.57e-46 160
MS.gene45307.t1 AT3G28470 63.063 111 40 1 1 111 1 110 1.74e-46 159
MS.gene45307.t1 AT5G62320 57.724 123 44 3 2 117 3 124 1.87e-46 157
MS.gene45307.t1 AT3G13890 59.821 112 45 0 6 117 5 116 2.48e-46 160
MS.gene45307.t1 AT5G14340 56.303 119 51 1 1 119 13 130 2.76e-46 157
MS.gene45307.t1 AT3G47600 58.120 117 48 1 1 117 1 116 3.32e-46 159
MS.gene45307.t1 AT2G47460 59.016 122 48 2 1 122 1 120 3.79e-46 159
MS.gene45307.t1 AT3G12820 59.130 115 46 1 3 117 5 118 4.23e-46 155
MS.gene45307.t1 AT1G18710 60.360 111 44 0 12 122 11 121 4.87e-46 156
MS.gene45307.t1 AT5G49330 58.974 117 47 1 1 117 1 116 9.53e-46 158
MS.gene45307.t1 AT3G28910 57.627 118 49 1 1 118 1 117 2.07e-45 156
MS.gene45307.t1 AT4G01680 50.641 156 54 3 6 138 5 160 2.40e-45 157
MS.gene45307.t1 AT1G79180 41.500 200 74 3 2 159 4 202 2.43e-45 156
MS.gene45307.t1 AT5G40330 64.423 104 37 0 14 117 13 116 3.01e-45 153
MS.gene45307.t1 AT1G74650 58.120 117 48 1 1 117 1 116 3.79e-45 156
MS.gene45307.t1 AT5G62470 57.265 117 49 1 1 117 1 116 5.83e-45 156
MS.gene45307.t1 AT3G12720 54.955 111 50 0 7 117 16 126 1.12e-44 154
MS.gene45307.t1 AT5G57620 56.780 118 49 2 1 117 1 117 2.09e-44 154
MS.gene45307.t1 AT3G27920 62.500 104 39 0 14 117 15 118 2.38e-44 151
MS.gene45307.t1 AT3G27810 40.909 198 110 4 13 204 20 216 4.77e-44 150
MS.gene45307.t1 AT3G49690 52.713 129 59 2 1 128 1 128 5.36e-44 152
MS.gene45307.t1 AT5G12870 58.120 117 49 0 1 117 6 122 8.57e-44 151
MS.gene45307.t1 AT1G63910 56.250 112 49 0 6 117 5 116 1.15e-43 153
MS.gene45307.t1 AT5G62470 57.265 117 48 2 1 117 1 115 2.24e-43 152
MS.gene45307.t1 AT3G13890 55.372 121 45 1 6 117 5 125 2.35e-43 152
MS.gene45307.t1 AT5G65790 51.515 132 62 2 1 131 1 131 8.32e-43 151
MS.gene45307.t1 AT5G35550 57.391 115 49 0 3 117 4 118 1.97e-42 147
MS.gene45307.t1 AT5G23000 55.085 118 51 2 1 117 1 117 2.38e-42 149
MS.gene45307.t1 AT3G11440 57.407 108 46 0 9 116 37 144 2.52e-42 152
MS.gene45307.t1 AT4G37780 53.390 118 53 2 1 117 1 117 5.59e-42 147
MS.gene45307.t1 AT3G11440 57.407 108 46 0 9 116 37 144 1.03e-41 151
MS.gene45307.t1 AT3G11440 57.407 108 46 0 9 116 37 144 1.03e-41 151
MS.gene45307.t1 AT3G11440 57.407 108 46 0 9 116 37 144 1.03e-41 151
MS.gene45307.t1 AT3G08500 58.182 110 46 0 8 117 25 134 1.09e-41 147
MS.gene45307.t1 AT5G52600 61.468 109 42 0 8 116 7 115 1.96e-41 142
MS.gene45307.t1 AT2G36890 55.085 118 51 2 1 117 1 117 3.85e-41 144
MS.gene45307.t1 AT4G26930 59.223 103 42 0 13 115 19 121 4.27e-41 147
MS.gene45307.t1 AT2G32460 58.095 105 44 0 12 116 5 109 5.18e-41 148
MS.gene45307.t1 AT2G32460 58.095 105 44 0 12 116 17 121 5.48e-41 148
MS.gene45307.t1 AT5G06100 57.143 105 45 0 12 116 31 135 5.60e-41 147
MS.gene45307.t1 AT4G13480 58.475 118 48 1 14 131 7 123 5.62e-41 143
MS.gene45307.t1 AT2G36890 55.085 118 51 2 1 117 42 158 6.60e-41 145
MS.gene45307.t1 AT3G24310 55.285 123 54 1 12 134 17 138 7.06e-41 143
MS.gene45307.t1 AT5G40350 38.776 196 109 3 13 204 17 205 1.02e-40 141
MS.gene45307.t1 AT5G55020 61.165 103 40 0 13 115 26 128 1.06e-40 148
MS.gene45307.t1 AT5G06100 57.143 105 45 0 12 116 31 135 2.04e-40 147
MS.gene45307.t1 AT5G06100 57.143 105 45 0 12 116 31 135 2.04e-40 147
MS.gene45307.t1 AT5G06100 57.143 105 45 0 12 116 31 135 2.04e-40 147
MS.gene45307.t1 AT5G06100 57.143 105 45 0 12 116 31 135 2.04e-40 147
MS.gene45307.t1 AT3G01530 52.632 114 54 0 4 117 16 129 4.82e-40 139
MS.gene45307.t1 AT3G48920 57.407 108 46 0 10 117 15 122 6.03e-40 140
MS.gene45307.t1 AT3G30210 51.515 132 60 1 12 143 26 153 1.50e-39 140
MS.gene45307.t1 AT1G25340 43.529 170 86 2 14 176 19 185 2.47e-39 139
MS.gene45307.t1 AT1G66370 46.667 165 74 5 12 176 7 157 2.52e-39 138
MS.gene45307.t1 AT2G47190 50.000 118 59 0 2 119 9 126 5.70e-39 138
MS.gene45307.t1 AT2G26960 56.604 106 46 0 10 115 17 122 1.36e-38 141
MS.gene45307.t1 AT1G48000 56.311 103 45 0 13 115 32 134 1.44e-38 136
MS.gene45307.t1 AT1G68320 51.200 125 58 1 13 137 19 140 2.03e-38 137
MS.gene45307.t1 AT5G52260 47.333 150 72 2 10 153 9 157 2.27e-38 136
MS.gene45307.t1 AT4G25560 54.310 116 50 1 1 116 1 113 1.62e-37 135
MS.gene45307.t1 AT3G46130 54.128 109 50 0 9 117 5 113 2.97e-37 133
MS.gene45307.t1 AT5G59780 55.769 104 46 0 14 117 9 112 1.25e-36 131
MS.gene45307.t1 AT5G14750 65.591 93 23 2 25 117 3 86 3.03e-35 125
MS.gene45307.t1 AT1G66380 56.897 116 50 0 12 127 7 122 3.14e-35 124
MS.gene45307.t1 AT1G25340 41.765 170 84 3 14 176 19 180 1.22e-34 127
MS.gene45307.t1 AT1G25340 41.765 170 84 3 14 176 19 180 2.32e-34 127
MS.gene45307.t1 AT1G56650 41.622 185 91 3 12 185 7 185 2.39e-34 125
MS.gene45307.t1 AT1G66390 60.000 105 42 0 12 116 7 111 2.53e-34 125
MS.gene45307.t1 AT3G53200 50.926 108 53 0 9 116 5 112 2.91e-34 125
MS.gene45307.t1 AT3G06490 55.140 107 48 0 13 119 19 125 3.79e-34 127
MS.gene45307.t1 AT3G27810 38.922 167 95 4 44 204 2 167 5.68e-34 122
MS.gene45307.t1 AT5G49620 56.311 103 45 0 13 115 26 128 2.07e-33 124
MS.gene45307.t1 AT5G35550 68.831 77 24 0 41 117 45 121 2.81e-33 123
MS.gene45307.t1 AT5G26660 69.444 72 22 0 46 117 14 85 1.85e-32 122
MS.gene45307.t1 AT3G60460 49.565 115 55 2 9 120 7 121 1.75e-31 119
MS.gene45307.t1 AT2G26950 49.020 102 52 0 10 111 13 114 9.69e-31 119
MS.gene45307.t1 AT3G47600 55.914 93 37 1 25 117 22 110 2.31e-30 117
MS.gene45307.t1 AT3G12820 68.116 69 22 0 49 117 2 70 2.36e-30 113
MS.gene45307.t1 AT5G40350 36.810 163 92 3 46 204 5 160 3.85e-30 112
MS.gene45307.t1 AT5G49620 49.573 117 45 1 13 115 26 142 7.91e-30 115
MS.gene45307.t1 AT3G46130 63.014 73 27 0 45 117 9 81 4.83e-29 111
MS.gene45307.t1 AT4G18770 45.370 108 58 1 9 116 211 317 6.42e-29 115
MS.gene45307.t1 AT5G59780 63.889 72 26 0 46 117 20 91 9.58e-29 110
MS.gene45307.t1 AT3G46130 63.889 72 26 0 46 117 20 91 1.16e-28 110
MS.gene45307.t1 AT3G27785 43.182 132 67 3 1 132 175 298 1.62e-28 114
MS.gene45307.t1 AT5G11510 45.283 106 57 1 13 118 79 183 2.07e-27 112
MS.gene45307.t1 AT5G11510 33.333 114 74 2 15 127 29 141 2.01e-14 73.9
MS.gene45307.t1 AT5G11510 45.283 106 57 1 13 118 79 183 2.07e-27 112
MS.gene45307.t1 AT5G11510 33.333 114 74 2 15 127 29 141 2.01e-14 73.9
MS.gene45307.t1 AT5G11510 45.283 106 57 1 13 118 79 183 2.07e-27 112
MS.gene45307.t1 AT5G11510 33.333 114 74 2 15 127 29 141 2.01e-14 73.9
MS.gene45307.t1 AT5G11510 45.283 106 57 1 13 118 79 183 2.63e-27 112
MS.gene45307.t1 AT5G11510 33.333 114 74 2 15 127 29 141 2.11e-14 73.9
MS.gene45307.t1 AT5G11510 45.283 106 57 1 13 118 79 183 3.04e-27 112
MS.gene45307.t1 AT5G11510 33.333 114 74 2 15 127 29 141 2.31e-14 73.9
MS.gene45307.t1 AT3G53200 61.972 71 27 0 46 116 9 79 1.19e-26 104
MS.gene45307.t1 AT3G50060 40.769 130 75 2 15 143 6 134 1.28e-26 106
MS.gene45307.t1 AT1G22640 42.336 137 59 4 59 187 1 125 1.58e-26 103
MS.gene45307.t1 AT3G09230 46.552 116 52 3 15 125 55 165 1.96e-26 107
MS.gene45307.t1 AT3G23250 71.667 60 17 0 59 118 1 60 2.21e-26 103
MS.gene45307.t1 AT5G58850 44.660 103 54 2 15 116 105 205 3.57e-26 107
MS.gene45307.t1 AT5G40360 44.444 108 57 2 9 115 152 257 7.24e-26 105
MS.gene45307.t1 AT1G69560 46.296 108 55 2 10 116 102 207 7.38e-26 105
MS.gene45307.t1 AT5G14750 72.881 59 16 0 59 117 1 59 8.05e-26 100
MS.gene45307.t1 AT5G14750 72.881 59 16 0 59 117 1 59 8.05e-26 100
MS.gene45307.t1 AT4G33450 45.133 113 61 1 8 120 12 123 8.30e-26 103
MS.gene45307.t1 AT1G69560 46.296 108 55 2 10 116 118 223 9.79e-26 105
MS.gene45307.t1 AT1G17950 49.515 103 49 2 15 116 5 105 1.00e-25 102
MS.gene45307.t1 AT5G67300 47.059 102 53 1 15 116 6 106 1.13e-25 103
MS.gene45307.t1 AT5G11050 43.689 103 55 2 15 116 105 205 5.64e-25 103
MS.gene45307.t1 AT5G02320 45.192 104 56 1 15 118 127 229 5.99e-25 104
MS.gene45307.t1 AT5G02320 34.783 115 73 2 15 128 75 188 9.86e-14 71.6
MS.gene45307.t1 AT5G02320 45.192 104 56 1 15 118 127 229 5.99e-25 104
MS.gene45307.t1 AT5G02320 34.783 115 73 2 15 128 75 188 9.86e-14 71.6
MS.gene45307.t1 AT5G02320 45.192 104 56 1 15 118 67 169 7.28e-25 104
MS.gene45307.t1 AT5G02320 35.714 126 76 4 7 128 4 128 2.24e-14 73.6
MS.gene45307.t1 AT1G26780 47.573 103 51 2 15 116 98 198 9.98e-25 100
MS.gene45307.t1 AT1G26780 46.667 105 53 2 13 116 96 198 1.10e-24 102
MS.gene45307.t1 AT3G09370 37.500 152 82 3 15 158 135 281 1.31e-24 103
MS.gene45307.t1 AT3G09370 33.333 114 74 2 15 127 83 195 6.50e-12 66.2
MS.gene45307.t1 AT3G09370 37.500 152 82 3 15 158 130 276 1.37e-24 103
MS.gene45307.t1 AT3G09370 33.333 114 74 2 15 127 78 190 6.89e-12 66.2
MS.gene45307.t1 AT3G09370 37.500 152 82 3 15 158 143 289 1.38e-24 103
MS.gene45307.t1 AT3G09370 33.043 115 75 2 15 128 91 204 5.56e-12 66.6
MS.gene45307.t1 AT1G66380 65.753 73 25 0 44 116 6 78 1.56e-24 95.5
MS.gene45307.t1 AT4G37260 46.078 102 54 1 15 116 13 113 1.72e-24 101
MS.gene45307.t1 AT4G32730 42.453 106 60 1 13 118 85 189 7.07e-24 102
MS.gene45307.t1 AT4G32730 33.333 114 74 2 15 127 35 147 1.16e-13 72.0
MS.gene45307.t1 AT4G32730 42.453 106 60 1 13 118 85 189 7.07e-24 102
MS.gene45307.t1 AT4G32730 33.333 114 74 2 15 127 35 147 1.16e-13 72.0
MS.gene45307.t1 AT4G32730 42.453 106 60 1 13 118 85 189 7.07e-24 102
MS.gene45307.t1 AT4G32730 33.333 114 74 2 15 127 35 147 1.16e-13 72.0
MS.gene45307.t1 AT4G32730 42.453 106 60 1 13 118 85 189 7.07e-24 102
MS.gene45307.t1 AT4G32730 33.333 114 74 2 15 127 35 147 1.16e-13 72.0
MS.gene45307.t1 AT4G32730 42.453 106 60 1 13 118 85 189 7.72e-24 102
MS.gene45307.t1 AT4G32730 33.333 114 74 2 15 127 35 147 1.13e-13 71.6
MS.gene45307.t1 AT1G73410 50.485 103 48 2 15 116 6 106 8.22e-24 97.8
MS.gene45307.t1 AT3G29020 36.220 127 80 1 15 141 67 192 1.40e-23 98.2
MS.gene45307.t1 AT2G23290 44.660 103 56 1 15 117 13 114 1.42e-23 98.6
MS.gene45307.t1 AT3G29020 36.220 127 80 1 15 141 65 190 1.53e-23 96.7
MS.gene45307.t1 AT5G17800 38.346 133 79 2 15 145 93 224 2.55e-23 97.8
MS.gene45307.t1 AT1G18960 42.276 123 59 4 6 125 4 117 3.00e-23 97.4
MS.gene45307.t1 AT1G73410 50.485 103 48 2 15 116 6 106 3.84e-23 94.7
MS.gene45307.t1 AT2G39880 45.283 106 49 2 15 116 50 150 9.86e-23 97.1
MS.gene45307.t1 AT3G55730 44.660 103 54 2 15 116 56 156 1.08e-22 97.4
MS.gene45307.t1 AT2G25230 43.750 112 59 3 9 119 20 128 1.51e-22 94.0
MS.gene45307.t1 AT1G66380 58.228 79 33 0 12 90 7 85 1.02e-21 88.2
MS.gene45307.t1 AT5G39700 41.322 121 64 2 8 125 49 165 5.04e-21 89.0
MS.gene45307.t1 AT1G71030 56.061 66 29 0 52 117 5 70 5.41e-21 88.6
MS.gene45307.t1 AT1G71030 56.061 66 29 0 52 117 19 84 7.85e-21 88.6
MS.gene45307.t1 AT2G37630 43.750 96 52 1 18 111 7 102 2.59e-20 90.1
MS.gene45307.t1 AT5G40430 41.026 117 64 4 2 117 41 153 2.24e-19 85.9
MS.gene45307.t1 AT4G00540 38.596 114 58 3 13 119 101 209 2.08e-18 85.1
MS.gene45307.t1 AT4G00540 33.058 121 73 2 15 127 46 166 2.87e-12 67.0
MS.gene45307.t1 AT4G00540 38.596 114 58 3 13 119 99 207 3.37e-18 84.7
MS.gene45307.t1 AT4G00540 33.058 121 73 2 15 127 44 164 3.38e-12 67.0
MS.gene45307.t1 AT1G14350 39.815 108 62 2 17 123 27 132 2.88e-17 82.0
MS.gene45307.t1 AT1G14350 39.815 108 62 2 17 123 27 132 2.88e-17 82.0
MS.gene45307.t1 AT3G18100 31.544 149 92 3 14 158 545 687 4.33e-16 79.0
MS.gene45307.t1 AT3G18100 31.544 149 92 3 14 158 497 639 4.98e-16 79.0
MS.gene45307.t1 AT2G02820 37.963 108 64 2 17 123 32 137 6.60e-16 78.2
MS.gene45307.t1 AT3G18100 31.544 149 92 3 14 158 384 526 6.74e-16 78.6
MS.gene45307.t1 AT2G02820 37.963 108 64 2 17 123 32 137 7.58e-16 77.8
MS.gene45307.t1 AT3G18100 31.544 149 92 3 14 158 332 474 9.26e-16 77.8
MS.gene45307.t1 AT2G02820 38.889 108 63 2 17 123 32 137 9.57e-16 77.0
MS.gene45307.t1 AT5G59780 59.574 47 19 0 71 117 1 47 3.86e-14 69.7
MS.gene45307.t1 AT3G46130 59.574 47 19 0 71 117 1 47 5.50e-14 69.7
MS.gene45307.t1 AT4G25560 60.870 46 18 0 71 116 2 47 3.20e-13 68.2
MS.gene45307.t1 AT1G14350 43.284 67 38 0 57 123 23 89 3.17e-11 63.9
MS.gene45307.t1 AT1G14350 43.284 67 38 0 57 123 23 89 3.17e-11 63.9

Find 51 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACGTGGATGAAAGATTT+TGG 0.162901 4.3:+52926207 MS.gene45307:CDS
ACCACTTATGAGGATGATTT+TGG 0.206289 4.3:+52926164 MS.gene45307:CDS
TGTGATCAACTCTCTTCTTT+AGG 0.212201 4.3:-52925962 None:intergenic
CTTTCATCGAATGAATGATT+TGG 0.250262 4.3:-52926323 None:intergenic
ATTGCTTATGTCACTAGATA+TGG 0.291146 4.3:+52925585 MS.gene45307:CDS
CGCCAACTTCCCAAGTTTGC+AGG 0.293097 4.3:+52925621 MS.gene45307:CDS
GTGATCAACTCTCTTCTTTA+GGG 0.294729 4.3:-52925961 None:intergenic
TAGTATATGATGAGGATATT+TGG 0.326391 4.3:+52926498 MS.gene45307:CDS
ACTTCATTATCTGTTCTTCC+AGG 0.339491 4.3:-52925918 None:intergenic
CTAGATATGGTTGCTGGAAT+TGG 0.347558 4.3:+52925598 MS.gene45307:CDS
GATGATGAAAGTGGGGATAA+TGG 0.387971 4.3:-52926104 None:intergenic
ACATTGAATCCACAAAAGAT+AGG 0.404787 4.3:+52926021 MS.gene45307:CDS
ATATTAATTACCTGCAAACT+TGG 0.407998 4.3:-52925631 None:intergenic
CATGGACTGCTGAAGAAGAT+AGG 0.410291 4.3:+52925556 MS.gene45307:CDS
CTTTCACCAAGTTACTCATT+CGG 0.427003 4.3:+52926052 MS.gene45307:CDS
ATAATGAAGTGAAGAACTAT+TGG 0.433566 4.3:+52925931 MS.gene45307:CDS
TCCATTGCGGCCGAGTTACC+TGG 0.444960 4.3:+52925900 MS.gene45307:CDS
ATGTCACTAGATATGGTTGC+TGG 0.454705 4.3:+52925592 MS.gene45307:CDS
TCGGCAAAGGTGTCAGCAAT+TGG 0.456772 4.3:-52926454 None:intergenic
GACCAGTGATGTCTGAGGTT+TGG 0.465299 4.3:-52926082 None:intergenic
TACCTGCAAACTTGGGAAGT+TGG 0.466120 4.3:-52925623 None:intergenic
CTAAGACCTAATATCAAAAG+AGG 0.476128 4.3:+52925810 MS.gene45307:CDS
TCAGCAATTGGCTTGGAACT+TGG 0.483881 4.3:-52926442 None:intergenic
ATCTGTTCTTCCAGGTAACT+CGG 0.488002 4.3:-52925910 None:intergenic
ACCAAAATCATCCTCATAAG+TGG 0.490259 4.3:-52926165 None:intergenic
TTTCAGGTCTTTCAAGGTGT+GGG 0.511467 4.3:+52925757 MS.gene45307:intron
CACTATTCCACTTGGTGTGT+CGG 0.513065 4.3:-52926240 None:intergenic
TCCAGGTAACTCGGCCGCAA+TGG 0.515613 4.3:-52925901 None:intergenic
ATTTCAGGTCTTTCAAGGTG+TGG 0.520974 4.3:+52925756 MS.gene45307:intron
ATTGCTGACACCTTTGCCGA+TGG 0.525845 4.3:+52926457 MS.gene45307:CDS
AGATCACAGTACCACTTATG+AGG 0.534762 4.3:+52926154 MS.gene45307:CDS
TATTAATTACCTGCAAACTT+GGG 0.536627 4.3:-52925630 None:intergenic
AATTCACTAGATGATGAAAG+TGG 0.546186 4.3:-52926113 None:intergenic
TTCCACTTGGTGTGTCGGAA+AGG 0.550723 4.3:-52926235 None:intergenic
CATTGAATCCACAAAAGATA+GGG 0.551489 4.3:+52926022 MS.gene45307:CDS
TTGTTCTGCACTATTCCACT+TGG 0.559068 4.3:-52926248 None:intergenic
CGAATGAGTAACTTGGTGAA+AGG 0.561074 4.3:-52926051 None:intergenic
GGAAGAGTTGTAGATTGAGA+TGG 0.566126 4.3:+52925778 MS.gene45307:CDS
ATTCACTAGATGATGAAAGT+GGG 0.574282 4.3:-52926112 None:intergenic
TATTCAGATTCCATCGGCAA+AGG 0.574722 4.3:-52926467 None:intergenic
AAACTTCACTCAACAAGAAG+AGG 0.574927 4.3:+52925833 MS.gene45307:CDS
GACTAGCCGAATGAGTAACT+TGG 0.577346 4.3:-52926058 None:intergenic
AAAGGTGTCAGCAATTGGCT+TGG 0.581520 4.3:-52926449 None:intergenic
CTCCAAACCTCAGACATCAC+TGG 0.591035 4.3:+52926080 MS.gene45307:CDS
GTGGAATGAGGAAAGGAACA+TGG 0.591827 4.3:+52925538 MS.gene45307:CDS
TTCACTAGATGATGAAAGTG+GGG 0.630465 4.3:-52926111 None:intergenic
GAATAGATGGTCATCCATTG+CGG 0.633326 4.3:+52925887 MS.gene45307:CDS
AGATGGATTAATAGAAGACG+TGG 0.651506 4.3:+52926193 MS.gene45307:CDS
GACCTTTCCGACACACCAAG+TGG 0.657460 4.3:+52926233 MS.gene45307:CDS
ACTGTGATCTGAATAATCTG+TGG 0.669958 4.3:-52926141 None:intergenic
TAATGGACCAGTGATGTCTG+AGG 0.689225 4.3:-52926087 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATCAAGATACTAATGT+TGG + chr4.3:52926287-52926306 MS.gene45307:CDS 20.0%
!! ATGATGCTTAAAAAAAATTG+TGG + chr4.3:52925693-52925712 MS.gene45307:intron 20.0%
!! GGTAATTAATATATAGAACT+TGG + chr4.3:52925642-52925661 MS.gene45307:intron 20.0%
!!! TTTGTTTTGGATAATGATTT+TGG + chr4.3:52926347-52926366 MS.gene45307:CDS 20.0%
!!! TTTTTCTATAGTATATGATG+AGG + chr4.3:52926490-52926509 MS.gene45307:CDS 20.0%
! ATAATGAAGTGAAGAACTAT+TGG + chr4.3:52925931-52925950 MS.gene45307:CDS 25.0%
! ATATTAATTACCTGCAAACT+TGG - chr4.3:52925634-52925653 None:intergenic 25.0%
! GAAAAATATTCAGATTCCAT+CGG - chr4.3:52926476-52926495 None:intergenic 25.0%
! TAGTATATGATGAGGATATT+TGG + chr4.3:52926498-52926517 MS.gene45307:CDS 25.0%
! TATTAATTACCTGCAAACTT+GGG - chr4.3:52925633-52925652 None:intergenic 25.0%
!! AAGTTTCCTCTTTTGATATT+AGG - chr4.3:52925819-52925838 None:intergenic 25.0%
!!! AGTCAACAATTGATAGTTTT+TGG + chr4.3:52926393-52926412 MS.gene45307:CDS 25.0%
!!! ATTCGATGAAAGTTTTGTTT+TGG + chr4.3:52926334-52926353 MS.gene45307:CDS 25.0%
!!! ATTGCATCGTTTTTTATTTC+AGG + chr4.3:52925741-52925760 MS.gene45307:intron 25.0%
!!! TTTTTATTTCAGGTCTTTCA+AGG + chr4.3:52925751-52925770 MS.gene45307:intron 25.0%
AAAAAAAGTGGAATGAGGAA+AGG + chr4.3:52925531-52925550 MS.gene45307:CDS 30.0%
AAAGTTCAATATCCAACTTC+AGG - chr4.3:52925669-52925688 None:intergenic 30.0%
AATTCACTAGATGATGAAAG+TGG - chr4.3:52926116-52926135 None:intergenic 30.0%
ACATTGAATCCACAAAAGAT+AGG + chr4.3:52926021-52926040 MS.gene45307:CDS 30.0%
ATAAAAAGCTTGGGAATAGA+TGG + chr4.3:52925874-52925893 MS.gene45307:CDS 30.0%
ATTCACTAGATGATGAAAGT+GGG - chr4.3:52926115-52926134 None:intergenic 30.0%
ATTGCTTATGTCACTAGATA+TGG + chr4.3:52925585-52925604 MS.gene45307:CDS 30.0%
CATTGAATCCACAAAAGATA+GGG + chr4.3:52926022-52926041 MS.gene45307:CDS 30.0%
CTAAGACCTAATATCAAAAG+AGG + chr4.3:52925810-52925829 MS.gene45307:CDS 30.0%
CTTTCATCGAATGAATGATT+TGG - chr4.3:52926326-52926345 None:intergenic 30.0%
!! GGATTCAATGTCTTTTGATT+TGG - chr4.3:52926012-52926031 None:intergenic 30.0%
!!! GATGATTTTGGTTTTCTAGA+TGG + chr4.3:52926176-52926195 MS.gene45307:CDS 30.0%
AAACTTCACTCAACAAGAAG+AGG + chr4.3:52925833-52925852 MS.gene45307:CDS 35.0%
ACCAAAATCATCCTCATAAG+TGG - chr4.3:52926168-52926187 None:intergenic 35.0%
ACTGTGATCTGAATAATCTG+TGG - chr4.3:52926144-52926163 None:intergenic 35.0%
ACTTCATTATCTGTTCTTCC+AGG - chr4.3:52925921-52925940 None:intergenic 35.0%
ATCCGAATGCATAAAAAGCT+TGG + chr4.3:52925864-52925883 MS.gene45307:CDS 35.0%
CCTTCATGTGACAAAAAAAG+TGG + chr4.3:52925519-52925538 MS.gene45307:CDS 35.0%
CTTTCACCAAGTTACTCATT+CGG + chr4.3:52926052-52926071 MS.gene45307:CDS 35.0%
GTGACAAAAAAAGTGGAATG+AGG + chr4.3:52925526-52925545 MS.gene45307:CDS 35.0%
GTGATCAACTCTCTTCTTTA+GGG - chr4.3:52925964-52925983 None:intergenic 35.0%
TCCGAATGCATAAAAAGCTT+GGG + chr4.3:52925865-52925884 MS.gene45307:CDS 35.0%
TGTGATCAACTCTCTTCTTT+AGG - chr4.3:52925965-52925984 None:intergenic 35.0%
TTCACTAGATGATGAAAGTG+GGG - chr4.3:52926114-52926133 None:intergenic 35.0%
! AAGACGTGGATGAAAGATTT+TGG + chr4.3:52926207-52926226 MS.gene45307:CDS 35.0%
! ACCACTTATGAGGATGATTT+TGG + chr4.3:52926164-52926183 MS.gene45307:CDS 35.0%
! AGACGTGGATGAAAGATTTT+GGG + chr4.3:52926208-52926227 MS.gene45307:CDS 35.0%
! GGAAATATCCCTATCTTTTG+TGG - chr4.3:52926033-52926052 None:intergenic 35.0%
! TCCCAAGCTTTTTATGCATT+CGG - chr4.3:52925869-52925888 None:intergenic 35.0%
!! AGATGGATTAATAGAAGACG+TGG + chr4.3:52926193-52926212 MS.gene45307:CDS 35.0%
!!! CCACTTTTTTTGTCACATGA+AGG - chr4.3:52925522-52925541 None:intergenic 35.0%
AGATCACAGTACCACTTATG+AGG + chr4.3:52926154-52926173 MS.gene45307:CDS 40.0%
ATAGAACTTGGACCTGAAGT+TGG + chr4.3:52925654-52925673 MS.gene45307:intron 40.0%
ATCTGTTCTTCCAGGTAACT+CGG - chr4.3:52925913-52925932 None:intergenic 40.0%
ATGTCACTAGATATGGTTGC+TGG + chr4.3:52925592-52925611 MS.gene45307:CDS 40.0%
CTAGATATGGTTGCTGGAAT+TGG + chr4.3:52925598-52925617 MS.gene45307:CDS 40.0%
GAATAGATGGTCATCCATTG+CGG + chr4.3:52925887-52925906 MS.gene45307:CDS 40.0%
GATGATGAAAGTGGGGATAA+TGG - chr4.3:52926107-52926126 None:intergenic 40.0%
GGAAGAGTTGTAGATTGAGA+TGG + chr4.3:52925778-52925797 MS.gene45307:CDS 40.0%
TATTCAGATTCCATCGGCAA+AGG - chr4.3:52926470-52926489 None:intergenic 40.0%
TTGTTCTGCACTATTCCACT+TGG - chr4.3:52926251-52926270 None:intergenic 40.0%
! ATTTCAGGTCTTTCAAGGTG+TGG + chr4.3:52925756-52925775 MS.gene45307:intron 40.0%
! CGAATGAGTAACTTGGTGAA+AGG - chr4.3:52926054-52926073 None:intergenic 40.0%
! TTTCAGGTCTTTCAAGGTGT+GGG + chr4.3:52925757-52925776 MS.gene45307:intron 40.0%
GTGGAATGAGGAAAGGAACA+TGG + chr4.3:52925538-52925557 MS.gene45307:CDS 45.0%
TACCTGCAAACTTGGGAAGT+TGG - chr4.3:52925626-52925645 None:intergenic 45.0%
! CATGGACTGCTGAAGAAGAT+AGG + chr4.3:52925556-52925575 MS.gene45307:CDS 45.0%
! GACTAGCCGAATGAGTAACT+TGG - chr4.3:52926061-52926080 None:intergenic 45.0%
! TAATGGACCAGTGATGTCTG+AGG - chr4.3:52926090-52926109 None:intergenic 45.0%
!! AAAGGTGTCAGCAATTGGCT+TGG - chr4.3:52926452-52926471 None:intergenic 45.0%
!! CACTATTCCACTTGGTGTGT+CGG - chr4.3:52926243-52926262 None:intergenic 45.0%
!! TCAGCAATTGGCTTGGAACT+TGG - chr4.3:52926445-52926464 None:intergenic 45.0%
ATTGCTGACACCTTTGCCGA+TGG + chr4.3:52926457-52926476 MS.gene45307:CDS 50.0%
CTCCAAACCTCAGACATCAC+TGG + chr4.3:52926080-52926099 MS.gene45307:CDS 50.0%
! GACCAGTGATGTCTGAGGTT+TGG - chr4.3:52926085-52926104 None:intergenic 50.0%
!! TCGGCAAAGGTGTCAGCAAT+TGG - chr4.3:52926457-52926476 None:intergenic 50.0%
!! TTCCACTTGGTGTGTCGGAA+AGG - chr4.3:52926238-52926257 None:intergenic 50.0%
CGCCAACTTCCCAAGTTTGC+AGG + chr4.3:52925621-52925640 MS.gene45307:CDS 55.0%
GACCTTTCCGACACACCAAG+TGG + chr4.3:52926233-52926252 MS.gene45307:CDS 55.0%
TCCAGGTAACTCGGCCGCAA+TGG - chr4.3:52925904-52925923 None:intergenic 60.0%
TCCATTGCGGCCGAGTTACC+TGG + chr4.3:52925900-52925919 MS.gene45307:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 52925507 52926526 52925507 ID=MS.gene45307
chr4.3 mRNA 52925507 52926526 52925507 ID=MS.gene45307.t1;Parent=MS.gene45307
chr4.3 exon 52925507 52925642 52925507 ID=MS.gene45307.t1.exon1;Parent=MS.gene45307.t1
chr4.3 CDS 52925507 52925642 52925507 ID=cds.MS.gene45307.t1;Parent=MS.gene45307.t1
chr4.3 exon 52925763 52926526 52925763 ID=MS.gene45307.t1.exon2;Parent=MS.gene45307.t1
chr4.3 CDS 52925763 52926526 52925763 ID=cds.MS.gene45307.t1;Parent=MS.gene45307.t1
Gene Sequence

>MS.gene45307

ATGGCAAGAACTCCTTCATGTGACAAAAAAAGTGGAATGAGGAAAGGAACATGGACTGCTGAAGAAGATAGGAAATTAATTGCTTATGTCACTAGATATGGTTGCTGGAATTGGCGCCAACTTCCCAAGTTTGCAGGTAATTAATATATAGAACTTGGACCTGAAGTTGGATATTGAACTTTGATGATGATGCTTAAAAAAAATTGTGGTCAAGTAACATAAAATGTACTCACTATTGCATCGTTTTTTATTTCAGGTCTTTCAAGGTGTGGGAAGAGTTGTAGATTGAGATGGATGAATTATCTAAGACCTAATATCAAAAGAGGAAACTTCACTCAACAAGAAGAGGAGTTGATTATCCGAATGCATAAAAAGCTTGGGAATAGATGGTCATCCATTGCGGCCGAGTTACCTGGAAGAACAGATAATGAAGTGAAGAACTATTGGCATACTTCCCTAAAGAAGAGAGTTGATCACAACGAAATCACAAATATTGAAGAAACCAAATCAAAAGACATTGAATCCACAAAAGATAGGGATATTTCCTTTCACCAAGTTACTCATTCGGCTAGTCTCCAAACCTCAGACATCACTGGTCCATTATCCCCACTTTCATCATCTAGTGAATTCTCTTCCACAGATTATTCAGATCACAGTACCACTTATGAGGATGATTTTGGTTTTCTAGATGGATTAATAGAAGACGTGGATGAAAGATTTTGGGATGACCTTTCCGACACACCAAGTGGAATAGTGCAGAACAATACTAATTGTAATTTTAAAAATCAAGATACTAATGTTGGTTTTTTAGTGTCTCCAAATCATTCATTCGATGAAAGTTTTGTTTTGGATAATGATTTTGGAAGCTTCGTAGATACATACAACGAGTCAACAATTGATAGTTTTTGGACACAATCATATGAAGCTGACATGCACCAAGTTCCAAGCCAATTGCTGACACCTTTGCCGATGGAATCTGAATATTTTTCTATAGTATATGATGAGGATATTTGGAGTTGA

Protein sequence

>MS.gene45307.t1

MARTPSCDKKSGMRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWMNYLRPNIKRGNFTQQEEELIIRMHKKLGNRWSSIAAELPGRTDNEVKNYWHTSLKKRVDHNEITNIEETKSKDIESTKDRDISFHQVTHSASLQTSDITGPLSPLSSSSEFSSTDYSDHSTTYEDDFGFLDGLIEDVDERFWDDLSDTPSGIVQNNTNCNFKNQDTNVGFLVSPNHSFDESFVLDNDFGSFVDTYNESTIDSFWTQSYEADMHQVPSQLLTPLPMESEYFSIVYDEDIWS